Psyllid ID: psy15108

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
Protein Sequence
GDLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS
Secondary Structure (PSIPRED)
ccHHHHHHHHccccccccccccccccccHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccHHHEEEEEccccccEEEEEEEcccccHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcHHHcEEEcccccEEccccccEEccccccccHHHccHHHHHHcEEcHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
GDLKQFLLATrkdskdksgsgkprvkgDLKQFLLATRkdskdksgsgkprvrslsTSQAVTMAYQVALGLehisdkrlihkdiaarnclissdLSVKISLSGLSKDTYQKEYYKYRNAilplrwlpyeavfddefstksdvYAYACLIWEIFnkgempfpdlsddQVLSQLESKKLcwkhssktpeyITSLhekcihphphqrptfpsiVTQLSDamcndvns
Flexible Loop (DISEMBL)
gdlkqfllatrkdskdksgsgkprvkgdlkqfllatrkdskdksgsgkprvrslstsqaVTMAYQVALGLEHISDKRLIHKDIAARnclissdlsvkislsglskdtYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS
Low Complexity Region (SEG)
GDLKQFLLATRkdskdksgsgkPRVKGDLKQFLLATRkdskdksgsgkPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS
Disordered region (IsUnstruct)
**********************************************************AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL****VLSQLESKKLCWKHSSKTPEYITSLHEKCIH**************************
Disordered Region (DISOPRED)
GDLKQFLLATRKDSKDKSGSGKPRVKGDLKQFL*********************STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC*****
Disordered Region (DISEMBL)
GDLKQFLLAT**************VKGDLKQFLLATR*******************SQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS
Disordered Region (DISPRO)
GDLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
GDLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	223	2.2.26 [Sep-21-2011]
Q91048	1051	Inactive tyrosine-protein	yes	N/A	0.825	0.175	0.484	6e-48
Q8BKG3	1062	Inactive tyrosine-protein	yes	N/A	0.820	0.172	0.476	2e-45
Q13308	1070	Inactive tyrosine-protein	yes	N/A	0.820	0.171	0.460	6e-44
Q290N5	1037	Tyrosine-protein kinase-l	yes	N/A	0.847	0.182	0.411	8e-42
B4GBH0	1035	Tyrosine-protein kinase-l	N/A	N/A	0.847	0.182	0.411	9e-42
B3MH43	1037	Tyrosine-protein kinase-l	N/A	N/A	0.856	0.184	0.406	1e-41
B4P5Q9	1033	Tyrosine-protein kinase-l	N/A	N/A	0.847	0.182	0.419	2e-41
Q6AWJ9	1033	Tyrosine-protein kinase-l	yes	N/A	0.847	0.182	0.419	2e-41
B4QC63	1029	Tyrosine-protein kinase-l	N/A	N/A	0.847	0.183	0.419	2e-41
B4HNW4	1029	Tyrosine-protein kinase-l	N/A	N/A	0.847	0.183	0.419	2e-41

>sp|Q91048|PTK7_CHICK Inactive tyrosine-protein kinase 7 OS=Gallus gallus GN=PTK7 PE=2 SV=1

 Score =  190 bits (483), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 92/190 (48%), Positives = 126/190 (66%), Gaps = 6/190 (3%)

Query: 27   GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
            GDLKQFL    + SK K  S KP+   LST   V++  QVALG+EH+S+ R +H+D+AAR
Sbjct: 862  GDLKQFL----RISKSKDESLKPQ--PLSTKHKVSLCTQVALGMEHLSNGRFVHRDLAAR 915

Query: 87   NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
            NCL+S+   VK+S   LSKD Y  EYY +R A +PLRW+P EAV +DEFSTKSDV+++  
Sbjct: 916  NCLVSAQRQVKVSALSLSKDVYNSEYYHFRQAWIPLRWMPPEAVLEDEFSTKSDVWSFGV 975

Query: 147  LIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
            L+WE+F +GEMP+  L+DD+VL+ L+S K         P  +T L ++C  P P  RP+F
Sbjct: 976  LMWEVFTQGEMPYAPLADDEVLAGLKSGKTKLPQPEGCPSRLTKLMQRCWAPSPKDRPSF 1035

Query: 207  PSIVTQLSDA 216
              +   L D+
Sbjct: 1036 SELAAALGDS 1045

Inactive tyrosine kinase involved in Wnt signaling. pathway.
Gallus gallus (taxid: 9031)

>sp|Q8BKG3|PTK7_MOUSE Inactive tyrosine-protein kinase 7 OS=Mus musculus GN=Ptk7 PE=1 SV=1

 Score =  182 bits (462), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 91/191 (47%), Positives = 123/191 (64%), Gaps = 8/191 (4%)

Query: 27   GDLKQFL-LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDLKQFL ++  KD K KS       + LST Q V +  QVALG+EH+S+ R +HKD+AA
Sbjct: 873  GDLKQFLRISKNKDEKLKS-------QPLSTKQKVALCSQVALGMEHLSNNRFVHKDLAA 925

Query: 86   RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            RNCLIS+   VK+S  GLSKD Y  EYY +R A +PLRW+  EAV + +FSTKSDV+A+ 
Sbjct: 926  RNCLISAQRQVKVSALGLSKDVYNSEYYHFRQAWVPLRWMSPEAVLEGDFSTKSDVWAFG 985

Query: 146  CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
             L+WE+F  GEMP    +DD+VL+ L++ K         P  +  L ++C  P+P  RP+
Sbjct: 986  VLMWEVFTHGEMPHGGQADDEVLADLQAGKARLPQPEGCPSKLYRLMQRCWAPNPKDRPS 1045

Query: 206  FPSIVTQLSDA 216
            F  I + L D+
Sbjct: 1046 FSEIASTLGDS 1056

Inactive tyrosine kinase involved in Wnt signaling pathway. Component of both the non-canonical (also known as the Wnt/planar cell polarity signaling) and the canonical Wnt signaling pathway. Functions in cell adhesion, cell migration, cell polarity, proliferation, actin cytoskeleton reorganization and apoptosis. Has a role in embryogenesis, epithelial tissue organization and angiogenesis.

Mus musculus (taxid: 10090)

>sp|Q13308|PTK7_HUMAN Inactive tyrosine-protein kinase 7 OS=Homo sapiens GN=PTK7 PE=1 SV=2

 Score =  177 bits (448), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 88/191 (46%), Positives = 121/191 (63%), Gaps = 8/191 (4%)

Query: 27   GDLKQFL-LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDLKQFL ++  KD K KS       + LST Q V +  QVALG+EH+S+ R +HKD+AA
Sbjct: 881  GDLKQFLRISKSKDEKLKS-------QPLSTKQKVALCTQVALGMEHLSNNRFVHKDLAA 933

Query: 86   RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            RNCL+S+   VK+S  GLSKD Y  EYY +R A +PLRW+  EA+ + +FSTKSDV+A+ 
Sbjct: 934  RNCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWVPLRWMSPEAILEGDFSTKSDVWAFG 993

Query: 146  CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
             L+WE+F  GEMP    +DD+VL+ L++ K         P  +  L ++C    P  RP+
Sbjct: 994  VLMWEVFTHGEMPHGGQADDEVLADLQAGKARLPQPEGCPSKLYRLMQRCWALSPKDRPS 1053

Query: 206  FPSIVTQLSDA 216
            F  I + L D+
Sbjct: 1054 FSEIASALGDS 1064

Inactive tyrosine kinase involved in Wnt signaling pathway. Component of both the non-canonical (also known as the Wnt/planar cell polarity signaling) and the canonical Wnt signaling pathway. Functions in cell adhesion, cell migration, cell polarity, proliferation, actin cytoskeleton reorganization and apoptosis. Has a role in embryogenesis, epithelial tissue organization and angiogenesis.

Homo sapiens (taxid: 9606)

>sp|Q290N5|PTK7_DROPS Tyrosine-protein kinase-like otk OS=Drosophila pseudoobscura pseudoobscura GN=otk PE=3 SV=2

 Score =  170 bits (430), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 125/192 (65%), Gaps = 3/192 (1%)

Query: 27   GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
            GDLKQFLLAT       + +  P   +L+TSQ + +AYQ+A G++ I   R  H+D+A R
Sbjct: 842  GDLKQFLLATAGKVNTATATSSPP--ALTTSQVLAVAYQIARGMDAIYRSRCTHRDLATR 899

Query: 87   NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
            NC+ISS+  VK+S   L KD Y +EY+K+RN +LP+RWL  E + +DE++TKSD++AY  
Sbjct: 900  NCVISSEFVVKVSYPALCKDKYSREYHKHRNTLLPVRWLAPECIQEDEYTTKSDIFAYGV 959

Query: 147  LIWEIFNKG-EMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            L+WE+FN+  ++P  +L+ +QV+ + ++  L W  +  TP+ +  +   C   +P +RP+
Sbjct: 960  LVWELFNQATKLPHEELTSEQVIQRSQAGTLEWTVAEATPDSLKEILLSCWLANPKERPS 1019

Query: 206  FPSIVTQLSDAM 217
            F  + + LS AM
Sbjct: 1020 FSQLGSALSKAM 1031

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|B4GBH0|PTK7_DROPE Tyrosine-protein kinase-like otk OS=Drosophila persimilis GN=otk PE=3 SV=1

 Score =  170 bits (430), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 125/192 (65%), Gaps = 3/192 (1%)

Query: 27   GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
            GDLKQFLLAT       + +  P   +L+TSQ + +AYQ+A G++ I   R  H+D+A R
Sbjct: 840  GDLKQFLLATAGKVNTATATSSPP--ALTTSQVLAVAYQIARGMDAIYRSRCTHRDLATR 897

Query: 87   NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
            NC+ISS+  VK+S   L KD Y +EY+K+RN +LP+RWL  E + +DE++TKSD++AY  
Sbjct: 898  NCVISSEFVVKVSYPALCKDKYSREYHKHRNTLLPVRWLAPECIQEDEYTTKSDIFAYGV 957

Query: 147  LIWEIFNKG-EMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            L+WE+FN+  ++P  +L+ +QV+ + ++  L W  +  TP+ +  +   C   +P +RP+
Sbjct: 958  LVWELFNQATKLPHEELTSEQVIQRSQAGTLEWTVAEATPDSLKEILLSCWLANPKERPS 1017

Query: 206  FPSIVTQLSDAM 217
            F  + + LS AM
Sbjct: 1018 FSQLGSALSKAM 1029

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila persimilis (taxid: 7234)

>sp|B3MH43|PTK7_DROAN Tyrosine-protein kinase-like otk OS=Drosophila ananassae GN=otk PE=3 SV=1

 Score =  169 bits (429), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/192 (40%), Positives = 123/192 (64%), Gaps = 1/192 (0%)

Query: 27   GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
            GDLKQFLLAT       S +       L+TSQ + +AYQ+A G++ I   R  H+D+A R
Sbjct: 841  GDLKQFLLATAGKVNTASAAATSSPPPLTTSQVLAVAYQIARGMDAIYRARFTHRDLATR 900

Query: 87   NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
            NC+ISS+  VK+S   L KD Y +EY+K+RN +LP+RWL  E + +DE++TKSD++AY  
Sbjct: 901  NCVISSEFIVKVSYPALCKDKYSREYHKHRNTLLPIRWLAPECIQEDEYTTKSDIFAYGV 960

Query: 147  LIWEIFNKG-EMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WE+FN+  ++P  +L+++QV+ + ++  L W  +  TP+ +  +   C   +P +RP+
Sbjct: 961  VVWELFNQATKLPHEELTNEQVIQKSQAGTLEWTVAESTPDSLREILLSCWVSNPKERPS 1020

Query: 206  FPSIVTQLSDAM 217
            F  +   LS AM
Sbjct: 1021 FSQLGAALSKAM 1032

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila ananassae (taxid: 7217)

>sp|B4P5Q9|PTK7_DROYA Tyrosine-protein kinase-like otk OS=Drosophila yakuba GN=otk PE=3 SV=1

 Score =  169 bits (428), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 127/193 (65%), Gaps = 4/193 (2%)

Query: 27   GDLKQFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDLKQFLLAT  K +   +GS  P    L+TSQ + +AYQ+A G++ I   R  H+D+A 
Sbjct: 838  GDLKQFLLATAGKVNTATAGSSSPP--PLTTSQVLAVAYQIARGMDAIYRARFTHRDLAT 895

Query: 86   RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            RNC+ISS+  VK+S   L KD Y +EY+K+RN +LP+RWL  E + +DE++TKSD++AY 
Sbjct: 896  RNCVISSEFIVKVSYPALCKDKYSREYHKHRNTLLPIRWLAPECIQEDEYTTKSDIFAYG 955

Query: 146  CLIWEIFNKG-EMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WE+FN+  ++P  +L+++QV+ + ++  L W  +  TP+ +  +   C   +P +RP
Sbjct: 956  VVVWELFNQATKLPHEELTNEQVVQRSQAGSLEWSVAESTPDSLREILLSCWVANPKERP 1015

Query: 205  TFPSIVTQLSDAM 217
            +F  +   LS AM
Sbjct: 1016 SFSQLGAALSKAM 1028

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila yakuba (taxid: 7245)

>sp|Q6AWJ9|PTK7_DROME Tyrosine-protein kinase-like otk OS=Drosophila melanogaster GN=otk PE=1 SV=1

 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 127/193 (65%), Gaps = 4/193 (2%)

Query: 27   GDLKQFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDLKQFLLAT  K +   +GS  P    L+TSQ + +AYQ+A G++ I   R  H+D+A 
Sbjct: 838  GDLKQFLLATAGKVNTATAGSSSPP--PLTTSQVLAVAYQIARGMDAIYRARFTHRDLAT 895

Query: 86   RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            RNC+ISS+  VK+S   L KD Y +EY+K+RN +LP+RWL  E + +DE++TKSD++AY 
Sbjct: 896  RNCVISSEFIVKVSYPALCKDKYSREYHKHRNTLLPIRWLAPECIQEDEYTTKSDIFAYG 955

Query: 146  CLIWEIFNKG-EMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WE+FN+  ++P  +L+++QV+ + ++  L W  +  TP+ +  +   C   +P +RP
Sbjct: 956  VVVWELFNQATKLPHEELTNEQVVQRSQAGSLEWSVAEATPDSLREILLSCWVSNPKERP 1015

Query: 205  TFPSIVTQLSDAM 217
            +F  +   LS AM
Sbjct: 1016 SFSQLGAALSKAM 1028

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila melanogaster (taxid: 7227)

>sp|B4QC63|PTK7_DROSI Tyrosine-protein kinase-like otk OS=Drosophila simulans GN=otk PE=3 SV=1

 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 127/193 (65%), Gaps = 4/193 (2%)

Query: 27   GDLKQFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDLKQFLLAT  K +   +GS  P    L+TSQ + +AYQ+A G++ I   R  H+D+A 
Sbjct: 834  GDLKQFLLATAGKVNTATAGSSSPP--PLTTSQVLAVAYQIARGMDAIYRARFTHRDLAT 891

Query: 86   RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            RNC+ISS+  VK+S   L KD Y +EY+K+RN +LP+RWL  E + +DE++TKSD++AY 
Sbjct: 892  RNCVISSEFIVKVSYPALCKDKYSREYHKHRNTLLPIRWLAPECIQEDEYTTKSDIFAYG 951

Query: 146  CLIWEIFNKG-EMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WE+FN+  ++P  +L+++QV+ + ++  L W  +  TP+ +  +   C   +P +RP
Sbjct: 952  VVVWELFNQATKLPHEELTNEQVVQRSQAGSLEWSVAEATPDSLREILLSCWVSNPKERP 1011

Query: 205  TFPSIVTQLSDAM 217
            +F  +   LS AM
Sbjct: 1012 SFSQLGAALSKAM 1024

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila simulans (taxid: 7240)

>sp|B4HNW4|PTK7_DROSE Tyrosine-protein kinase-like otk OS=Drosophila sechellia GN=otk PE=3 SV=1

 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 127/193 (65%), Gaps = 4/193 (2%)

Query: 27   GDLKQFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDLKQFLLAT  K +   +GS  P    L+TSQ + +AYQ+A G++ I   R  H+D+A 
Sbjct: 834  GDLKQFLLATAGKVNTATAGSSSPP--PLTTSQVLAVAYQIARGMDAIYRARFTHRDLAT 891

Query: 86   RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            RNC+ISS+  VK+S   L KD Y +EY+K+RN +LP+RWL  E + +DE++TKSD++AY 
Sbjct: 892  RNCVISSEFIVKVSYPALCKDKYSREYHKHRNTLLPIRWLAPECIQEDEYTTKSDIFAYG 951

Query: 146  CLIWEIFNKG-EMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WE+FN+  ++P  +L+++QV+ + ++  L W  +  TP+ +  +   C   +P +RP
Sbjct: 952  VVVWELFNQATKLPHEELTNEQVVQRSQAGSLEWSVAEATPDSLREILLSCWVSNPKERP 1011

Query: 205  TFPSIVTQLSDAM 217
            +F  +   LS AM
Sbjct: 1012 SFSQLGAALSKAM 1024

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila sechellia (taxid: 7238)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
332031157	1128	Tyrosine-protein kinase-like 7 [Acromyrm	0.865	0.171	0.492	1e-54
307173150	942	Tyrosine-protein kinase-like 7 [Camponot	0.865	0.204	0.487	1e-54
156554986	1117	PREDICTED: tyrosine-protein kinase-like	0.874	0.174	0.520	4e-54
380014239	517	PREDICTED: tyrosine-protein kinase-like	0.865	0.373	0.487	5e-54
328792325	990	PREDICTED: tyrosine-protein kinase-like	0.865	0.194	0.487	6e-54
307198546	1006	Tyrosine-protein kinase-like 7 [Harpegna	0.865	0.191	0.487	6e-54
350419258	1110	PREDICTED: tyrosine-protein kinase-like	0.865	0.173	0.487	1e-53
340709064	1092	PREDICTED: tyrosine-protein kinase-like	0.865	0.176	0.487	1e-53
383865062	1012	PREDICTED: tyrosine-protein kinase-like	0.865	0.190	0.482	4e-53
224047300	1041	PREDICTED: inactive tyrosine-protein kin	0.825	0.176	0.484	2e-46

>gi|332031157|gb|EGI70734.1| Tyrosine-protein kinase-like 7 [Acromyrmex echinatior]

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 96/195 (49%), Positives = 146/195 (74%), Gaps = 2/195 (1%)

Query: 27   GDLKQFLLATRKD--SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
            GDLKQFL+A+RKD  S     +  PR   LS +Q ++++ Q A GL+H++D RL+HKDIA
Sbjct: 931  GDLKQFLIASRKDNNSSPTHETKVPRAPQLSVAQILSLSNQAAKGLKHLADNRLVHKDIA 990

Query: 85   ARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
            ARNCLI+S+L++KISL  ++K+ YQ+EY K+RN I+PLRWLPYEAV++DE+STKSDVY++
Sbjct: 991  ARNCLIASNLTIKISLPCMTKEPYQQEYTKHRNQIIPLRWLPYEAVYEDEYSTKSDVYSF 1050

Query: 145  ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
            +CL+WE+F++GE+PF  ++D+ VL+QL+++ L WK     P  +  L  +C    P +RP
Sbjct: 1051 SCLVWEMFHQGELPFNKMNDESVLTQLKAQTLTWKPHKAAPPALQELQTQCWANDPRERP 1110

Query: 205  TFPSIVTQLSDAMCN 219
            TF  +V+++ + + +
Sbjct: 1111 TFDEVVSKIGEIVVD 1125

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307173150|gb|EFN64250.1| Tyrosine-protein kinase-like 7 [Camponotus floridanus]

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 95/195 (48%), Positives = 146/195 (74%), Gaps = 2/195 (1%)

Query: 27  GDLKQFLLATRKDSKDKSG--SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
           GDLKQFL+A+RKD+       S  PR   LS +Q ++++ Q A GL+H++D RL+HKDIA
Sbjct: 745 GDLKQFLIASRKDNNPSPTHESKPPRAPQLSVAQILSLSNQAAKGLKHLADNRLVHKDIA 804

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           ARNCLI+S+L++KISL  ++K+ YQ+EY K+RN ++PLRWLPYEAV++DEFSTKSDVY++
Sbjct: 805 ARNCLIASNLTIKISLPCMTKEPYQQEYTKHRNQVIPLRWLPYEAVYEDEFSTKSDVYSF 864

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
           +CL+WE+F++GE+PF  ++D+ VL+Q++++ L WK     P  +  L  +C    P +RP
Sbjct: 865 SCLVWEMFHQGELPFNKMNDESVLAQIKAQTLIWKPHKAAPPALQELQTQCWANDPRERP 924

Query: 205 TFPSIVTQLSDAMCN 219
           TF  +V+++ + + +
Sbjct: 925 TFDEVVSKIGEIVVD 939

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156554986|ref|XP_001602704.1| PREDICTED: tyrosine-protein kinase-like otk-like [Nasonia vitripennis]

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 103/198 (52%), Positives = 144/198 (72%), Gaps = 3/198 (1%)

Query: 27   GDLKQFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDLK FLLA++ K+    +  GKPR   L+ +Q +++A Q A GL+HISD RL+HKD+AA
Sbjct: 920  GDLKTFLLASKSKEMAASTDGGKPRAPQLTVAQILSLANQAARGLKHISDHRLVHKDVAA 979

Query: 86   RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            RNCLISS L VKISLS ++K+ +Q+EY K++N I+PLRWLP EAVF+DE+STKSDVY+Y+
Sbjct: 980  RNCLISSALHVKISLSCMTKEPHQQEYTKHKNQIIPLRWLPKEAVFEDEYSTKSDVYSYS 1039

Query: 146  CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            CL+WE+F++GE+PF  L+D+ VL+QL+S+ L W      P  +  L  +C    P +RPT
Sbjct: 1040 CLVWEMFHQGELPFKKLNDESVLNQLKSQTLSWSAHKAAPPALQELQTQCWSYDPRERPT 1099

Query: 206  FPSIVTQLSDAM--CNDV 221
            F  IV +L + +  C+ V
Sbjct: 1100 FDEIVDKLQEIVVDCSQV 1117

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014239|ref|XP_003691147.1| PREDICTED: tyrosine-protein kinase-like otk-like [Apis florea]

 Score =  216 bits (550), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 95/195 (48%), Positives = 145/195 (74%), Gaps = 2/195 (1%)

Query: 27  GDLKQFLLATRKD--SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
           GDLKQFL+A+RKD  S     S  PR   LS +Q ++++ Q A GL+H++D RL+HKDIA
Sbjct: 320 GDLKQFLIASRKDNTSSPTHESKPPRAPQLSVAQILSLSNQAAKGLKHLADTRLVHKDIA 379

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           ARNCLI+S+L++KISL  ++K+ YQ+EY K+RN ++PLRWLPYEAV++DE+STKSDVY++
Sbjct: 380 ARNCLIASNLTIKISLPCMTKEPYQQEYTKHRNQVIPLRWLPYEAVYEDEYSTKSDVYSF 439

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
           +CL+WE+F++GE+PF  ++D+ VL+ L+++ L WK     P  +  L  +C    P +RP
Sbjct: 440 SCLVWEMFHQGELPFNKMNDESVLTALKAQTLAWKPHKAAPPALQELQAQCWANDPRERP 499

Query: 205 TFPSIVTQLSDAMCN 219
           TF  +V+++ + + +
Sbjct: 500 TFDEVVSKIGEIVVD 514

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792325|ref|XP_394162.4| PREDICTED: tyrosine-protein kinase-like otk-like [Apis mellifera]

 Score =  216 bits (550), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 95/195 (48%), Positives = 145/195 (74%), Gaps = 2/195 (1%)

Query: 27  GDLKQFLLATRKD--SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
           GDLKQFL+A+RKD  S     S  PR   LS +Q ++++ Q A GL+H++D RL+HKDIA
Sbjct: 793 GDLKQFLIASRKDNTSSPTHESKAPRAPQLSVAQILSLSNQAAKGLKHLADTRLVHKDIA 852

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           ARNCLI+S+L++KISL  ++K+ YQ+EY K+RN ++PLRWLPYEAV++DE+STKSDVY++
Sbjct: 853 ARNCLIASNLTIKISLPCMTKEPYQQEYTKHRNQVIPLRWLPYEAVYEDEYSTKSDVYSF 912

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
           +CL+WE+F++GE+PF  ++D+ VL+ L+++ L WK     P  +  L  +C    P +RP
Sbjct: 913 SCLVWEMFHQGELPFNKMNDESVLAALKAQTLAWKPHKAAPPSLQELQAQCWANDPRERP 972

Query: 205 TFPSIVTQLSDAMCN 219
           TF  +V+++ + + +
Sbjct: 973 TFDEVVSKIGEIVVD 987

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307198546|gb|EFN79431.1| Tyrosine-protein kinase-like 7 [Harpegnathos saltator]

 Score =  216 bits (550), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 95/195 (48%), Positives = 143/195 (73%), Gaps = 2/195 (1%)

Query: 27   GDLKQFLLATRKDSKDKSG--SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
            GDLKQFL+A+RKDS       S  PR   LS +Q + ++ Q A GL+H++D RL+HKDIA
Sbjct: 809  GDLKQFLIASRKDSNSSPTHESKPPRAPQLSVAQILALSNQAAKGLKHLADNRLVHKDIA 868

Query: 85   ARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
            ARNCLI+S+L++KISL  ++K+ Y +EY K+RN ++PLRWLPYEAV++DE+STKSDVY++
Sbjct: 869  ARNCLIASNLTIKISLPCMTKEPYHQEYTKHRNQVIPLRWLPYEAVYEDEYSTKSDVYSF 928

Query: 145  ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
            +CL+WE+F++GE+PF  ++D+ VL+QL+++ L WK     P  +  L  +C    P  RP
Sbjct: 929  SCLVWEMFHQGELPFNKMNDESVLTQLKAQTLIWKPHKAAPPTLQELQTQCWATDPRDRP 988

Query: 205  TFPSIVTQLSDAMCN 219
            TF  +V+++ + + +
Sbjct: 989  TFDEVVSKIGEIVAD 1003

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350419258|ref|XP_003492122.1| PREDICTED: tyrosine-protein kinase-like otk-like [Bombus impatiens]

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 95/195 (48%), Positives = 145/195 (74%), Gaps = 2/195 (1%)

Query: 27   GDLKQFLLATRKD--SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
            GDLKQFL+A+RKD  S     S  PR   LS +Q ++++ Q A GL+H++D RL+HKDIA
Sbjct: 913  GDLKQFLIASRKDNNSSPTHESKPPRAPQLSVAQILSLSNQAAKGLKHLADSRLVHKDIA 972

Query: 85   ARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
            ARNCLI+S+L++KISL  ++K+ YQ+EY K+RN ++PLRWLPYEAV++DE+STKSDVY++
Sbjct: 973  ARNCLIASNLTIKISLPCMTKEPYQQEYTKHRNQVIPLRWLPYEAVYEDEYSTKSDVYSF 1032

Query: 145  ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
            +CL+WE+F++GE+PF  ++D+ VL+ L+++ L WK     P  +  L  +C    P +RP
Sbjct: 1033 SCLVWEMFHQGELPFIKMNDESVLAALKAQTLAWKPHKAAPPALQELQAQCWANDPRERP 1092

Query: 205  TFPSIVTQLSDAMCN 219
            TF  +V+++ + + +
Sbjct: 1093 TFDEVVSKIGEIVVD 1107

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709064|ref|XP_003393135.1| PREDICTED: tyrosine-protein kinase-like otk-like [Bombus terrestris]

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 95/195 (48%), Positives = 145/195 (74%), Gaps = 2/195 (1%)

Query: 27   GDLKQFLLATRKD--SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
            GDLKQFL+A+RKD  S     S  PR   LS +Q ++++ Q A GL+H++D RL+HKDIA
Sbjct: 895  GDLKQFLIASRKDNNSSPTHESKPPRAPQLSVAQILSLSNQAAKGLKHLADSRLVHKDIA 954

Query: 85   ARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
            ARNCLI+S+L++KISL  ++K+ YQ+EY K+RN ++PLRWLPYEAV++DE+STKSDVY++
Sbjct: 955  ARNCLIASNLTIKISLPCMTKEPYQQEYTKHRNQVIPLRWLPYEAVYEDEYSTKSDVYSF 1014

Query: 145  ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
            +CL+WE+F++GE+PF  ++D+ VL+ L+++ L WK     P  +  L  +C    P +RP
Sbjct: 1015 SCLVWEMFHQGELPFIKMNDESVLAALKAQTLAWKPHKAAPPALQELQAQCWANDPRERP 1074

Query: 205  TFPSIVTQLSDAMCN 219
            TF  +V+++ + + +
Sbjct: 1075 TFDEVVSKIGEIVVD 1089

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865062|ref|XP_003707994.1| PREDICTED: tyrosine-protein kinase-like otk-like [Megachile rotundata]

 Score =  213 bits (543), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 94/195 (48%), Positives = 142/195 (72%), Gaps = 2/195 (1%)

Query: 27   GDLKQFLLATRKD--SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
            GDLKQFL+A+RKD  S     +  PR   LS +Q ++++ Q A GL+H++D RL+HKDIA
Sbjct: 815  GDLKQFLIASRKDNNSSPTQETKPPRAPQLSVAQILSLSNQAAKGLKHLADSRLVHKDIA 874

Query: 85   ARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
            ARNCLI+S+L++KIS   ++K+ YQ+EY K+RN ++PLRWLPYEAV++DE+STKSDVY++
Sbjct: 875  ARNCLIASNLTIKISFPCMTKEPYQQEYTKHRNQVIPLRWLPYEAVYEDEYSTKSDVYSF 934

Query: 145  ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
            +CL+WE+F++GE+PF  ++D+ VL+ L+S+ L WK     P  +  L  +C    P  RP
Sbjct: 935  SCLVWEMFHQGELPFNKMNDESVLTALKSQSLAWKPHKAAPPALQELQAQCWSNDPRDRP 994

Query: 205  TFPSIVTQLSDAMCN 219
            TF  +V ++ + + +
Sbjct: 995  TFDEVVLKIGEIVVD 1009

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|224047300|ref|XP_002195189.1| PREDICTED: inactive tyrosine-protein kinase 7 [Taeniopygia guttata]

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 92/190 (48%), Positives = 126/190 (66%), Gaps = 6/190 (3%)

Query: 27   GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
            GDLKQFL    + SK K  S KP+   L+T   V++  QVALG+EH+S+ R +H+D+AAR
Sbjct: 852  GDLKQFL----RISKSKDESLKPQ--PLTTKHKVSLCTQVALGMEHLSNGRFVHRDLAAR 905

Query: 87   NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
            NCL+S+   VK+S   LSKD Y  EYY +R A +PLRW+P EAV +DEFSTKSDV+++  
Sbjct: 906  NCLVSAQRQVKVSSLSLSKDVYNSEYYHFRQAWIPLRWMPPEAVLEDEFSTKSDVWSFGV 965

Query: 147  LIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
            L+WE+F  GEMP+  L+DD+VL+ L+S K    H    P  +  L ++C  P P  RP+F
Sbjct: 966  LMWEVFTHGEMPYTPLADDEVLAGLQSGKTKLPHPEGCPSRLAKLMQRCWAPSPKDRPSF 1025

Query: 207  PSIVTQLSDA 216
              + T L D+
Sbjct: 1026 SELATTLGDS 1035

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
UNIPROTKB|Q91048	1051	PTK7 "Inactive tyrosine-protei	0.825	0.175	0.452	3e-42
UNIPROTKB|F1NLV8	1049	PTK7 "Inactive tyrosine-protei	0.825	0.175	0.447	7.9e-42
ZFIN|ZDB-GENE-050522-216	1061	zgc:112211 "zgc:112211" [Danio	0.820	0.172	0.476	1.3e-41
UNIPROTKB|H0Y8F1	365	PTK7 "Inactive tyrosine-protei	0.825	0.504	0.436	3.2e-41
UNIPROTKB|B4MR28	1059	otk "Tyrosine-protein kinase-l	0.865	0.182	0.408	6.5e-41
MGI|MGI:1918711	1062	Ptk7 "PTK7 protein tyrosine ki	0.825	0.173	0.452	2.7e-40
UNIPROTKB|B3MH43	1037	otk "Tyrosine-protein kinase-l	0.856	0.184	0.401	4.3e-40
UNIPROTKB|F1MWK8	1070	PTK7 "Uncharacterized protein"	0.825	0.171	0.442	2e-39
UNIPROTKB|B4P5Q9	1033	otk "Tyrosine-protein kinase-l	0.852	0.183	0.401	3e-39
UNIPROTKB|B4HNW4	1029	otk "Tyrosine-protein kinase-l	0.852	0.184	0.401	3.8e-39

UNIPROTKB|Q91048 PTK7 "Inactive tyrosine-protein kinase 7" [Gallus gallus (taxid:9031)]

 Score = 449 (163.1 bits), Expect = 3.0e-42, Sum P(2) = 3.0e-42
 Identities = 86/190 (45%), Positives = 122/190 (64%)

Query:    27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
             GDLKQFL  ++            + + LST   V++  QVALG+EH+S+ R +H+D+AAR
Sbjct:   862 GDLKQFLRISKSKDESL------KPQPLSTKHKVSLCTQVALGMEHLSNGRFVHRDLAAR 915

Query:    87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
             NCL+S+   VK+S   LSKD Y  EYY +R A +PLRW+P EAV +DEFSTKSDV+++  
Sbjct:   916 NCLVSAQRQVKVSALSLSKDVYNSEYYHFRQAWIPLRWMPPEAVLEDEFSTKSDVWSFGV 975

Query:   147 LIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
             L+WE+F +GEMP+  L+DD+VL+ L+S K         P  +T L ++C  P P  RP+F
Sbjct:   976 LMWEVFTQGEMPYAPLADDEVLAGLKSGKTKLPQPEGCPSRLTKLMQRCWAPSPKDRPSF 1035

Query:   207 PSIVTQLSDA 216
               +   L D+
Sbjct:  1036 SELAAALGDS 1045

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

UNIPROTKB|F1NLV8 PTK7 "Inactive tyrosine-protein kinase 7" [Gallus gallus (taxid:9031)]

 Score = 445 (161.7 bits), Expect = 7.9e-42, Sum P(2) = 7.9e-42
 Identities = 85/190 (44%), Positives = 121/190 (63%)

Query:    27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
             GDLKQFL  ++            + + LST   V++  QVALG+EH+S+ R +H+D+AAR
Sbjct:   860 GDLKQFLRISKSKDESL------KPQPLSTKHKVSLCTQVALGMEHLSNGRFVHRDLAAR 913

Query:    87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
             NCL+S+   VK+S   LSKD Y  EYY +R A +PLRW+P EAV +DEFSTKSDV+++  
Sbjct:   914 NCLVSAQRQVKVSALSLSKDVYNSEYYHFRQAWIPLRWMPPEAVLEDEFSTKSDVWSFGV 973

Query:   147 LIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
             L+WE+F +GEMP+  L+DD+VL+ L+S K         P  +  L ++C  P P  RP+F
Sbjct:   974 LMWEVFTQGEMPYAPLADDEVLAGLQSGKTKLPQPEGCPSRLAKLMQRCWAPSPKDRPSF 1033

Query:   207 PSIVTQLSDA 216
               +   L D+
Sbjct:  1034 SELAAALGDS 1043

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0001736 "establishment of planar polarity" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0003401 "axis elongation" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=IEA

GO:0042060 "wound healing" evidence=IEA

GO:0045198 "establishment of epithelial cell apical/basal polarity" evidence=IEA

GO:0060026 "convergent extension" evidence=IEA

GO:0060070 "canonical Wnt receptor signaling pathway" evidence=IEA

GO:0060484 "lung-associated mesenchyme development" evidence=IEA

GO:0071300 "cellular response to retinoic acid" evidence=IEA

GO:0090103 "cochlea morphogenesis" evidence=IEA

GO:0090179 "planar cell polarity pathway involved in neural tube closure" evidence=IEA

ZFIN|ZDB-GENE-050522-216 zgc:112211 "zgc:112211" [Danio rerio (taxid:7955)]

 Score = 452 (164.2 bits), Expect = 1.3e-41, P = 1.3e-41
 Identities = 90/189 (47%), Positives = 124/189 (65%)

Query:    27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
             GDLKQ+L  ++            +V+ LST Q V++  QVA G+EH+S++R +HKD+AAR
Sbjct:   872 GDLKQYLRVSKSKDEKV------KVQPLSTKQKVSVCLQVARGMEHLSNQRFVHKDLAAR 925

Query:    87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
             NCLISS   +K+S  GLSKD Y  EYY YR + +PLRWLP EAVF+D+FSTK+DV+++A 
Sbjct:   926 NCLISSKRQIKVSSLGLSKDVYSSEYYHYRQSYIPLRWLPSEAVFEDDFSTKTDVWSFAV 985

Query:   147 LIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
             L+WE+F+ GEMP+ DL+DD+VL  L+  KL        P  +  L  +C    P  R +F
Sbjct:   986 LMWEVFSFGEMPYADLADDKVLEALQDGKLKLCPPQGCPSRVFKLMVRCWAASPKDRLSF 1045

Query:   207 PSIVTQLSD 215
               I + LSD
Sbjct:  1046 SEICSALSD 1054

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|H0Y8F1 PTK7 "Inactive tyrosine-protein kinase 7" [Homo sapiens (taxid:9606)]

 Score = 418 (152.2 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
 Identities = 83/190 (43%), Positives = 117/190 (61%)

Query:    27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
             GDLKQFL  ++            + + LST Q V +  QVALG+EH+S+ R +HKD+AAR
Sbjct:   176 GDLKQFLRISKSKDEKL------KSQPLSTKQKVALCTQVALGMEHLSNNRFVHKDLAAR 229

Query:    87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
             NCL+S+   VK+S  GLSKD Y  EYY +R A +PLRW+  EA+ + +FSTKSDV+A+  
Sbjct:   230 NCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWVPLRWMSPEAILEGDFSTKSDVWAFGV 289

Query:   147 LIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
             L+WE+F  GEMP    +DD+VL+ L++ K         P  +  L ++C    P  RP+F
Sbjct:   290 LMWEVFTHGEMPHGGQADDEVLADLQAGKARLPQPEGCPSKLYRLMQRCWALSPKDRPSF 349

Query:   207 PSIVTQLSDA 216
               I + L D+
Sbjct:   350 SEIASALGDS 359

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|B4MR28 otk "Tyrosine-protein kinase-like otk" [Drosophila willistoni (taxid:7260)]

 Score = 424 (154.3 bits), Expect = 6.5e-41, Sum P(2) = 6.5e-41
 Identities = 80/196 (40%), Positives = 124/196 (63%)

Query:    27 GDLKQFLLAT--RXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
             GDLKQFLLAT  +             +  L+TSQ + +AYQ+A G++ I   R  H+D+A
Sbjct:   862 GDLKQFLLATAGKVNTATTATSSTTPLPPLTTSQVLAVAYQIARGMDAIYRARFTHRDLA 921

Query:    85 ARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
              RNC+ISS+  VK+S   L KD Y +EY+K+RN++LP+RWL  E + +DE++TKSD+++Y
Sbjct:   922 TRNCVISSEFIVKVSYPALCKDKYSREYHKHRNSLLPIRWLAPECIQEDEYTTKSDIFSY 981

Query:   145 ACLIWEIFNKG-EMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
               ++WE+FN+  ++P  DL+++QV+ + +   L W  +  TPE +  +   C   +P QR
Sbjct:   982 GVVVWELFNQATKLPHEDLTNEQVIEKSQDGTLKWTVAESTPESLKEILLSCWSVNPKQR 1041

Query:   204 PTFPSIVTQLSDAMCN 219
             P+F  +   LS AM N
Sbjct:  1042 PSFSQLGAALSKAMQN 1057

GO:0004672 "protein kinase activity" evidence=ISS

GO:0004872 "receptor activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0007155 "cell adhesion" evidence=ISS

GO:0031290 "retinal ganglion cell axon guidance" evidence=ISS

GO:0050839 "cell adhesion molecule binding" evidence=ISS

MGI|MGI:1918711 Ptk7 "PTK7 protein tyrosine kinase 7" [Mus musculus (taxid:10090)]

 Score = 431 (156.8 bits), Expect = 2.7e-40, Sum P(2) = 2.7e-40
 Identities = 86/190 (45%), Positives = 119/190 (62%)

Query:    27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
             GDLKQFL  ++            + + LST Q V +  QVALG+EH+S+ R +HKD+AAR
Sbjct:   873 GDLKQFLRISKNKDEKL------KSQPLSTKQKVALCSQVALGMEHLSNNRFVHKDLAAR 926

Query:    87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
             NCLIS+   VK+S  GLSKD Y  EYY +R A +PLRW+  EAV + +FSTKSDV+A+  
Sbjct:   927 NCLISAQRQVKVSALGLSKDVYNSEYYHFRQAWVPLRWMSPEAVLEGDFSTKSDVWAFGV 986

Query:   147 LIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
             L+WE+F  GEMP    +DD+VL+ L++ K         P  +  L ++C  P+P  RP+F
Sbjct:   987 LMWEVFTHGEMPHGGQADDEVLADLQAGKARLPQPEGCPSKLYRLMQRCWAPNPKDRPSF 1046

Query:   207 PSIVTQLSDA 216
               I + L D+
Sbjct:  1047 SEIASTLGDS 1056

GO:0001736 "establishment of planar polarity" evidence=IMP

GO:0001843 "neural tube closure" evidence=IGI;IMP

GO:0003401 "axis elongation" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IC

GO:0005911 "cell-cell junction" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0007155 "cell adhesion" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=ISO

GO:0016020 "membrane" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016301 "kinase activity" evidence=IDA

GO:0016477 "cell migration" evidence=ISO

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=ISO

GO:0042060 "wound healing" evidence=IGI

GO:0045198 "establishment of epithelial cell apical/basal polarity" evidence=IMP

GO:0060026 "convergent extension" evidence=IMP

GO:0060070 "canonical Wnt receptor signaling pathway" evidence=ISO

GO:0060484 "lung-associated mesenchyme development" evidence=IMP

GO:0071300 "cellular response to retinoic acid" evidence=ISO

GO:0090103 "cochlea morphogenesis" evidence=IMP

GO:0090179 "planar cell polarity pathway involved in neural tube closure" evidence=IGI

UNIPROTKB|B3MH43 otk "Tyrosine-protein kinase-like otk" [Drosophila ananassae (taxid:7217)]

 Score = 416 (151.5 bits), Expect = 4.3e-40, Sum P(2) = 4.3e-40
 Identities = 77/192 (40%), Positives = 121/192 (63%)

Query:    27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
             GDLKQFLLAT                 L+TSQ + +AYQ+A G++ I   R  H+D+A R
Sbjct:   841 GDLKQFLLATAGKVNTASAAATSSPPPLTTSQVLAVAYQIARGMDAIYRARFTHRDLATR 900

Query:    87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
             NC+ISS+  VK+S   L KD Y +EY+K+RN +LP+RWL  E + +DE++TKSD++AY  
Sbjct:   901 NCVISSEFIVKVSYPALCKDKYSREYHKHRNTLLPIRWLAPECIQEDEYTTKSDIFAYGV 960

Query:   147 LIWEIFNKG-EMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
             ++WE+FN+  ++P  +L+++QV+ + ++  L W  +  TP+ +  +   C   +P +RP+
Sbjct:   961 VVWELFNQATKLPHEELTNEQVIQKSQAGTLEWTVAESTPDSLREILLSCWVSNPKERPS 1020

Query:   206 FPSIVTQLSDAM 217
             F  +   LS AM
Sbjct:  1021 FSQLGAALSKAM 1032

GO:0004672 "protein kinase activity" evidence=ISS

GO:0004872 "receptor activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0007155 "cell adhesion" evidence=ISS

GO:0031290 "retinal ganglion cell axon guidance" evidence=ISS

GO:0050839 "cell adhesion molecule binding" evidence=ISS

UNIPROTKB|F1MWK8 PTK7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 423 (154.0 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
 Identities = 84/190 (44%), Positives = 117/190 (61%)

Query:    27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
             GDLKQFL  ++            + + LST Q V +  QVALG+EH+S+ R +HKD+AAR
Sbjct:   881 GDLKQFLRISKSKDEKL------KSQPLSTKQKVGLCTQVALGMEHLSNNRFVHKDLAAR 934

Query:    87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
             NCL+S+   VK+S  GLSKD Y  EYY +R A +PLRW+P EA+ + +FSTKSDV+A+  
Sbjct:   935 NCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWVPLRWMPPEAILEGDFSTKSDVWAFGV 994

Query:   147 LIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
             L+WE+F  GEMP    +DD+VL+ L++ K         P  +  L ++C    P  RP+F
Sbjct:   995 LMWEVFTHGEMPHGGQADDEVLADLQAGKARLPQPEGCPSKLYRLMQRCWALSPKDRPSF 1054

Query:   207 PSIVTQLSDA 216
               I   L D+
Sbjct:  1055 SEIANALGDS 1064

GO:0090179 "planar cell polarity pathway involved in neural tube closure" evidence=IEA

GO:0090103 "cochlea morphogenesis" evidence=IEA

GO:0071300 "cellular response to retinoic acid" evidence=IEA

GO:0060484 "lung-associated mesenchyme development" evidence=IEA

GO:0060070 "canonical Wnt receptor signaling pathway" evidence=IEA

GO:0060026 "convergent extension" evidence=IEA

GO:0045198 "establishment of epithelial cell apical/basal polarity" evidence=IEA

GO:0042060 "wound healing" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0003401 "axis elongation" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0001736 "establishment of planar polarity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|B4P5Q9 otk "Tyrosine-protein kinase-like otk" [Drosophila yakuba (taxid:7245)]

 Score = 408 (148.7 bits), Expect = 3.0e-39, Sum P(2) = 3.0e-39
 Identities = 77/192 (40%), Positives = 121/192 (63%)

Query:    27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
             GDLKQFLLAT                 L+TSQ + +AYQ+A G++ I   R  H+D+A R
Sbjct:   838 GDLKQFLLATAGKVNTATAGSSSPP-PLTTSQVLAVAYQIARGMDAIYRARFTHRDLATR 896

Query:    87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
             NC+ISS+  VK+S   L KD Y +EY+K+RN +LP+RWL  E + +DE++TKSD++AY  
Sbjct:   897 NCVISSEFIVKVSYPALCKDKYSREYHKHRNTLLPIRWLAPECIQEDEYTTKSDIFAYGV 956

Query:   147 LIWEIFNKG-EMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
             ++WE+FN+  ++P  +L+++QV+ + ++  L W  +  TP+ +  +   C   +P +RP+
Sbjct:   957 VVWELFNQATKLPHEELTNEQVVQRSQAGSLEWSVAESTPDSLREILLSCWVANPKERPS 1016

Query:   206 FPSIVTQLSDAM 217
             F  +   LS AM
Sbjct:  1017 FSQLGAALSKAM 1028

GO:0004672 "protein kinase activity" evidence=ISS

GO:0004872 "receptor activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0007155 "cell adhesion" evidence=ISS

GO:0031290 "retinal ganglion cell axon guidance" evidence=ISS

GO:0050839 "cell adhesion molecule binding" evidence=ISS

UNIPROTKB|B4HNW4 otk "Tyrosine-protein kinase-like otk" [Drosophila sechellia (taxid:7238)]

 Score = 407 (148.3 bits), Expect = 3.8e-39, Sum P(2) = 3.8e-39
 Identities = 77/192 (40%), Positives = 121/192 (63%)

Query:    27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
             GDLKQFLLAT                 L+TSQ + +AYQ+A G++ I   R  H+D+A R
Sbjct:   834 GDLKQFLLATAGKVNTATAGSSSPP-PLTTSQVLAVAYQIARGMDAIYRARFTHRDLATR 892

Query:    87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
             NC+ISS+  VK+S   L KD Y +EY+K+RN +LP+RWL  E + +DE++TKSD++AY  
Sbjct:   893 NCVISSEFIVKVSYPALCKDKYSREYHKHRNTLLPIRWLAPECIQEDEYTTKSDIFAYGV 952

Query:   147 LIWEIFNKG-EMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
             ++WE+FN+  ++P  +L+++QV+ + ++  L W  +  TP+ +  +   C   +P +RP+
Sbjct:   953 VVWELFNQATKLPHEELTNEQVVQRSQAGSLEWSVAEATPDSLREILLSCWVSNPKERPS 1012

Query:   206 FPSIVTQLSDAM 217
             F  +   LS AM
Sbjct:  1013 FSQLGAALSKAM 1024

GO:0004672 "protein kinase activity" evidence=ISS

GO:0004872 "receptor activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0007155 "cell adhesion" evidence=ISS

GO:0031290 "retinal ganglion cell axon guidance" evidence=ISS

GO:0050839 "cell adhesion molecule binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	223
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	5e-82
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-62
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-62
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-60
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-56
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	8e-46
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	3e-41
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-41
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-39
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-39
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-38
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	1e-38
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-36
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-36
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	3e-36
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	4e-36
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	1e-35
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-35
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	8e-35
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	9e-35
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-34
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	5e-34
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-33
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	4e-33
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	8e-33
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-32
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-32
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	8e-32
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	8e-32
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	4e-31
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	4e-31
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	7e-31
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	8e-31
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	9e-31
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-30
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-30
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	4e-30
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	8e-30
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	1e-29
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-29
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-29
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-29
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-29
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-28
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-28
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	4e-28
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	6e-28
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	7e-28
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	9e-28
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	7e-27
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	5e-26
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	9e-26
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	2e-25
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-25
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	7e-25
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	8e-25
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-24
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-24
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	2e-24
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-24
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	3e-24
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	7e-24
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	8e-24
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	1e-23
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-23
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-23
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	3e-23
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	4e-23
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-23
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	4e-23
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	4e-23
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	7e-23
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-21
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-21
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	3e-21
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	4e-21
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-19
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-19
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-18
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	6e-18
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	9e-17
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	1e-16
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-16
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-16
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	9e-16
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-15
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	2e-15
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-13
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-13
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	6e-13
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	8e-12
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	5e-11
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	6e-11
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	9e-11
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-10
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-10
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	1e-09
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-08
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	8e-08
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-07
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-07
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-07
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	4e-07
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-07
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	9e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-06
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-06
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-06
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-06
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-06
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	2e-06
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-06
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-06
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	8e-06
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	8e-06
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	9e-06
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-05
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-05
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-05
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-05
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-05
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-05
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-05
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-05
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	4e-05
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	5e-05
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	6e-05
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-05
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	7e-05
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	8e-05
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-04
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	1e-04
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	3e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	3e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	3e-04
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	4e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-04
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	5e-04
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	5e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	6e-04
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	6e-04
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	0.001
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.001
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	0.001
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	0.001
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	0.001
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	0.001
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	0.001
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	0.001
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.001
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	0.002
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	0.002
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	0.002
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	0.002
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	0.002
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	0.002
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	0.002
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	0.003
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	0.003
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	0.004
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	0.004
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.004
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	0.004

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score =  245 bits (627), Expect = 5e-82
 Identities = 92/189 (48%), Positives = 129/189 (68%), Gaps = 6/189 (3%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLKQFL AT+  SKD+     P    LST Q V +  Q+ALG++H+S+ R +H+D+AAR
Sbjct: 93  GDLKQFLRATK--SKDEKLKPPP----LSTKQKVALCTQIALGMDHLSNARFVHRDLAAR 146

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
           NCL+SS   VK+SL  LSKD Y  EYYK RNA++PLRWL  EAV +D+FSTKSDV+++  
Sbjct: 147 NCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGV 206

Query: 147 LIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
           L+WE+F +GE+PF  LSD++VL++L++ KL        P  +  L  +C   +P  RP+F
Sbjct: 207 LMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSF 266

Query: 207 PSIVTQLSD 215
             +V+ L +
Sbjct: 267 SELVSALGE 275

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  194 bits (496), Expect = 3e-62
 Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 14/188 (7%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDL  +L              K R + LS S  ++ A Q+A G+E++  K  IH+D+AA
Sbjct: 85  GGDLLDYLR-------------KNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAA 131

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RNCL+  +L VKIS  GLS+D Y  +YYK +   LP+RW+  E++ + +F++KSDV+++ 
Sbjct: 132 RNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFG 191

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            L+WEIF  GE P+P +S+ +VL  L+      K     P  +  L  +C    P  RPT
Sbjct: 192 VLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPK-PPNCPPELYKLMLQCWAEDPEDRPT 250

Query: 206 FPSIVTQL 213
           F  +V  L
Sbjct: 251 FSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  193 bits (493), Expect = 8e-62
 Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 15/188 (7%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDL  +L   R                LS S  ++ A Q+A G+E++  K  IH+D+AA
Sbjct: 85  GGDLLSYLRKNRP--------------KLSLSDLLSFALQIARGMEYLESKNFIHRDLAA 130

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RNCL+  +L VKIS  GLS+D Y  +YY+ R   LP+RW+  E++ + +F++KSDV+++ 
Sbjct: 131 RNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFG 190

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            L+WEIF  GE P+P +S+++VL  L++     +     P  +  L  +C    P  RPT
Sbjct: 191 VLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQ-PPNCPPELYDLMLQCWAEDPEDRPT 249

Query: 206 FPSIVTQL 213
           F  +V  L
Sbjct: 250 FSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  189 bits (483), Expect = 2e-60
 Identities = 70/189 (37%), Positives = 107/189 (56%), Gaps = 10/189 (5%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL  +L  +R        S      +LS    ++ A Q+A G+E+++ K+ +H+D+AAR
Sbjct: 81  GDLLDYLRKSRPVFPSPEKS------TLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAAR 134

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKY-RNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NCL+  DL VKIS  GLS+D Y  +YY+      LP+RW+  E++ D  F++KSDV+++ 
Sbjct: 135 NCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFG 194

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLES-KKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
            L+WEIF  G  P+P LS+++VL  L    +L        P+ +  L   C    P  RP
Sbjct: 195 VLLWEIFTLGATPYPGLSNEEVLEYLRKGYRL--PKPEYCPDELYELMLSCWQLDPEDRP 252

Query: 205 TFPSIVTQL 213
           TF  +V +L
Sbjct: 253 TFSELVERL 261

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  178 bits (454), Expect = 5e-56
 Identities = 69/195 (35%), Positives = 106/195 (54%), Gaps = 28/195 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDL  FL                    L+    + MA Q+A G+E++  K  +H+D+AA
Sbjct: 85  GGDLLDFLRKHG--------------EKLTLKDLLQMALQIAKGMEYLESKNFVHRDLAA 130

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNCL++ +L VKIS  GLS+D Y+ +YY K     LP++W+  E++ D +F++KSDV+++
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHP 198
             L+WEIF  GE P+P +S+++VL  LE        + C       P+ +  L  +C   
Sbjct: 191 GVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPENC-------PDELYELMLQCWAY 243

Query: 199 HPHQRPTFPSIVTQL 213
            P  RPTF  +V  L
Sbjct: 244 DPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score =  152 bits (387), Expect = 8e-46
 Identities = 65/191 (34%), Positives = 114/191 (59%), Gaps = 7/191 (3%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           KGDLK +L + R ++++  G G P     +  + + MA ++A G+ +++ K+ +H+D+AA
Sbjct: 93  KGDLKSYLRSRRPEAENNPGLGPP-----TLQKFIQMAAEIADGMAYLAAKKFVHRDLAA 147

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ DL+VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+TKSDV+++
Sbjct: 148 RNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSF 207

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WE+    E P+  LS+++VL  +             P+ +  L   C   +P  RP
Sbjct: 208 GVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHL-DLPENCPDKLLELMRMCWQYNPKMRP 266

Query: 205 TFPSIVTQLSD 215
           TF  IV+ L D
Sbjct: 267 TFLEIVSSLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score =  141 bits (357), Expect = 3e-41
 Identities = 70/191 (36%), Positives = 117/191 (61%), Gaps = 7/191 (3%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVR-SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           GDL +FL+     S   + SG   V+ SL  S  + +A Q+A G+E++S    +H+D+AA
Sbjct: 93  GDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAA 152

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNCL+   L+VKIS  GLS+D Y  +YY+ +  ++LP+RW+P EA+   +F+T+SD++++
Sbjct: 153 RNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSF 212

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL--CWKHSSKTPEYITSLHEKCIHPHPHQ 202
             ++WEIF+ G  P+   S+ +V+  + S++L  C       P  + +L  +C +  P +
Sbjct: 213 GVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPC---PEDCPARVYALMIECWNEIPAR 269

Query: 203 RPTFPSIVTQL 213
           RP F  I T+L
Sbjct: 270 RPRFKDIHTRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score =  140 bits (355), Expect = 6e-41
 Identities = 61/193 (31%), Positives = 108/193 (55%), Gaps = 13/193 (6%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRS-------LSTSQAVTMAYQVALGLEHISDKRLI 79
           GDL +FL      ++          R        LS ++ + +A QVA G+ ++S+++ +
Sbjct: 93  GDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFV 152

Query: 80  HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKY-RNAILPLRWLPYEAVFDDEFSTK 138
           H+D+A RNCL+  ++ VKI+  GLS++ Y  +YYK   N  +P+RW+P E++F + ++T+
Sbjct: 153 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTE 212

Query: 139 SDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL--CWKHSSKTPEYITSLHEKCI 196
           SDV+AY  ++WEIF+ G  P+  ++ ++V+  +    +  C       P  + +L   C 
Sbjct: 213 SDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSC---PDNCPLELYNLMRLCW 269

Query: 197 HPHPHQRPTFPSI 209
              P  RP+F SI
Sbjct: 270 SKLPSDRPSFASI 282

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score =  136 bits (344), Expect = 2e-39
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 25/199 (12%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL   R   +  S        SL+    +  A  VA G +++ +   IH+DIAAR
Sbjct: 94  GDLKSFLRENRPRPERPS--------SLTMKDLLFCARDVAKGCKYLEENHFIHRDIAAR 145

Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI+  G+++D Y+  YY K   A+LP++W+P EA  D  F++K+DV+
Sbjct: 146 NCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVW 205

Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVL------SQLESKKLCWKHSSKTPEYITSLHEKCI 196
           ++  L+WEIF+ G MP+P  ++ +V+       +L+  K C       P  +  +   C 
Sbjct: 206 SFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGC-------PGPVYRIMTDCW 258

Query: 197 HPHPHQRPTFPSIVTQLSD 215
              P  RP F +I+ ++  
Sbjct: 259 QHTPEDRPNFATILERIQY 277

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score =  136 bits (345), Expect = 2e-39
 Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 12/195 (6%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL QFL    +    ++       +SLS S  + MA Q+A G+ ++     +H+D+A R
Sbjct: 104 GDLNQFL----QKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATR 159

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NCL+  + ++KI+  G+S++ Y  +YY+ +  A LP+RW+ +E+V   +F+TKSDV+A+ 
Sbjct: 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFG 219

Query: 146 CLIWEIFNKG-EMPFPDLSDDQVLSQLE------SKKLCWKHSSKTPEYITSLHEKCIHP 198
             +WEI     E P+  L+D QV+           +++        P+ I  L  +C   
Sbjct: 220 VTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRR 279

Query: 199 HPHQRPTFPSIVTQL 213
               RPTF  I   L
Sbjct: 280 DEEDRPTFREIHLFL 294

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score =  134 bits (340), Expect = 1e-38
 Identities = 69/194 (35%), Positives = 110/194 (56%), Gaps = 4/194 (2%)

Query: 26  KGDLKQFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
            G+L+ FL A R           +P   +L+    V+ AYQVA G+E ++ K+ IH+D+A
Sbjct: 100 HGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLA 159

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYA 143
           ARN L++ D  +KI+  GL++D +  +YY+   N  LP++W+  EA+FD  ++ +SDV++
Sbjct: 160 ARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 219

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
           +  L+WEIF  G  P+P +  +++   L+      K  + T E +  L   C H  P QR
Sbjct: 220 FGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQE-LYHLMRDCWHEVPSQR 278

Query: 204 PTFPSIVTQLSDAM 217
           PTF  +V  L D M
Sbjct: 279 PTFKQLVEDL-DRM 291

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score =  134 bits (339), Expect = 1e-38
 Identities = 65/191 (34%), Positives = 114/191 (59%), Gaps = 9/191 (4%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK +L + R ++++  G   P ++ +     + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 94  GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 148

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SD++++ 
Sbjct: 149 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 208

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLS-QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
            ++WEI +  E P+  LS++QVL   ++   L        PE +T L   C   +P  RP
Sbjct: 209 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL--DQPDNCPERVTDLMRMCWQFNPKMRP 266

Query: 205 TFPSIVTQLSD 215
           TF  IV  L D
Sbjct: 267 TFLEIVNLLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score =  129 bits (326), Expect = 1e-36
 Identities = 61/189 (32%), Positives = 107/189 (56%), Gaps = 5/189 (2%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL +FL +   D+        P    L+ SQ + +A Q+A G+ +++ +  +H+D+A R
Sbjct: 93  GDLNKFLRSHGPDAAFLKSPDSPMGE-LTLSQLLQIAVQIASGMVYLASQHFVHRDLATR 151

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NCL+  DL VKI   G+S+D Y  +YY+   + +LP+RW+P E++   +F+T+SDV+++ 
Sbjct: 152 NCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG 211

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKT-PEYITSLHEKCIHPHPHQRP 204
            ++WEIF  G+ P+  LS+++V+  +   +L      +T P  +  +   C    P QR 
Sbjct: 212 VVLWEIFTYGKQPWYGLSNEEVIECITQGRL--LQRPRTCPSEVYDIMLGCWKRDPQQRI 269

Query: 205 TFPSIVTQL 213
               I  +L
Sbjct: 270 NIKDIHERL 278

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score =  127 bits (322), Expect = 2e-36
 Identities = 66/196 (33%), Positives = 113/196 (57%), Gaps = 28/196 (14%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+   R ++ +      P V+ L     +    QVA G+E+++ K+ +H+D+AAR
Sbjct: 82  GDLRNFI---RSETHN------PTVKDL-----IGFGLQVAKGMEYLASKKFVHRDLAAR 127

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KEYY   N   A LP++W+  E++   +F+TKSDV++
Sbjct: 128 NCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWS 187

Query: 144 YACLIWEIFNKGEMPFPDL-SDDQVLSQLESKKLCWKHSSKTPEY----ITSLHEKCIHP 198
           +  L+WE+  +G  P+PD+ S D  +  L+ ++L        PEY    +  +   C HP
Sbjct: 188 FGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRL------LQPEYCPDPLYEVMLSCWHP 241

Query: 199 HPHQRPTFPSIVTQLS 214
            P  RPTF  +V+++ 
Sbjct: 242 KPEMRPTFSELVSRIE 257

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score =  128 bits (322), Expect = 3e-36
 Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 27/199 (13%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL  +L   R +              L+  + + +   VA G  ++     IH+D+AAR
Sbjct: 84  GDLLSYLRDARVERFGPPL--------LTLKELLDICLDVAKGCVYLEQMHFIHRDLAAR 135

Query: 87  NCLISS-----DLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSD 140
           NCL+S      D  VKI   GL++D Y+ +YY+     +LP+RW+  E++ D +F+T+SD
Sbjct: 136 NCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSD 195

Query: 141 VYAYACLIWEIFNKGEMPFPDLSDDQVLS------QLESKKLCWKHSSKTPEYITSLHEK 194
           V+++  L+WEI   G+ P+P L++ +VL       +L+  + C       P+ I  L   
Sbjct: 196 VWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENC-------PDKIYQLMTN 248

Query: 195 CIHPHPHQRPTFPSIVTQL 213
           C    P +RPTF  I   L
Sbjct: 249 CWAQDPSERPTFDRIQEIL 267

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score =  128 bits (324), Expect = 4e-36
 Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 5/191 (2%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L++FL A R    D +     +V    LS    V+ AYQVA G+E++  +R IH+D+
Sbjct: 102 KGNLREFLRARRPPGPDYTFDI-TKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDL 160

Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ D  +KI+  GL++  +  +YY K  N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 161 AARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVW 220

Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L       K S+ T E    + E C H  P Q
Sbjct: 221 SFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRE-CWHAVPTQ 279

Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 280 RPTFKQLVEAL 290

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score =  126 bits (318), Expect = 1e-35
 Identities = 59/191 (30%), Positives = 110/191 (57%), Gaps = 7/191 (3%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R + ++      P     S  + + MA ++A G+ +++  + +H+D+AA
Sbjct: 93  RGDLKSYLRSLRPEMENNPVQAPP-----SLKKMIQMAGEIADGMAYLNANKFVHRDLAA 147

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 148 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 207

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  +S++QVL  +    L  K     P+ +  L   C   +P  RP
Sbjct: 208 GVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRP 266

Query: 205 TFPSIVTQLSD 215
           +F  I++ + +
Sbjct: 267 SFLEIISSIKE 277

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score =  126 bits (318), Expect = 2e-35
 Identities = 71/196 (36%), Positives = 115/196 (58%), Gaps = 14/196 (7%)

Query: 26  KGDLKQFLL--ATRKD---SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 80
           +GDL +FL+  +   D   S D+ G+ K    SL     + +A Q+A G+E++S    +H
Sbjct: 91  QGDLHEFLIMRSPHSDVGCSSDEDGTVK---SSLDHGDFLHIAIQIAAGMEYLSSHFFVH 147

Query: 81  KDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKS 139
           KD+AARN LI   L VKIS  GLS++ Y  +YY+ +  ++LP+RW+P EA+   +FS+ S
Sbjct: 148 KDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDS 207

Query: 140 DVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL--CWKHSSKTPEYITSLHEKCIH 197
           D++++  ++WEIF+ G  P+   S+ +V+  +  ++L  C   S   P  + SL  +C  
Sbjct: 208 DIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPC---SEDCPPRMYSLMTECWQ 264

Query: 198 PHPHQRPTFPSIVTQL 213
             P +RP F  I T+L
Sbjct: 265 EGPSRRPRFKDIHTRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score =  124 bits (313), Expect = 8e-35
 Identities = 62/210 (29%), Positives = 111/210 (52%), Gaps = 25/210 (11%)

Query: 18  SGSGKPRV------KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLE 71
                P V       G+LK FL   R    +         ++LST Q V MA Q+A G+ 
Sbjct: 79  EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNP-------QALSTQQLVHMAIQIACGMS 131

Query: 72  HISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY-----KYRNAILPLRWLP 126
           ++  + +IHKDIAARNC+I  +L VKI+ + LS+D +  +Y+     + R    P++W+ 
Sbjct: 132 YLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENR----PVKWMA 187

Query: 127 YEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES-KKLCWKHSSKTP 185
            E++ + E+S+ SDV+++  L+WE+   G+ P+ ++   ++ + L+   +L        P
Sbjct: 188 LESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRL--AQPINCP 245

Query: 186 EYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           + + ++   C    P +RP+F  +V  L+D
Sbjct: 246 DELFAVMACCWALDPEERPSFSQLVQCLTD 275

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score =  125 bits (316), Expect = 9e-35
 Identities = 69/190 (36%), Positives = 113/190 (59%), Gaps = 3/190 (1%)

Query: 26  KGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
           KG+L+++L A R    D S  + K     L+    V+ AYQVA G+E+++ ++ IH+D+A
Sbjct: 102 KGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLA 161

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           ARN L++ D  +KI+  GL++D +  +YY K  N  LP++W+  EA+FD  ++ +SDV++
Sbjct: 162 ARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 221

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
           +  L+WEIF  G  P+P +  +++   L+      K ++ T E    + E C H  P QR
Sbjct: 222 FGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRE-CWHAVPSQR 280

Query: 204 PTFPSIVTQL 213
           PTF  +V  L
Sbjct: 281 PTFKQLVEDL 290

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score =  123 bits (311), Expect = 3e-34
 Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%)

Query: 26  KGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
           KG+L+++L A R    +      +     LS    V+ AYQVA G+E+++ K+ IH+D+A
Sbjct: 108 KGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLA 167

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           ARN L++ D  +KI+  GL++D +  +YY K  N  LP++W+  EA+FD  ++ +SDV++
Sbjct: 168 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 227

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
           +  L+WEIF  G  P+P +  +++   L+      K S+ T E    + + C H  P QR
Sbjct: 228 FGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQR 286

Query: 204 PTFPSIVTQL 213
           PTF  +V  L
Sbjct: 287 PTFKQLVEDL 296

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score =  123 bits (311), Expect = 5e-34
 Identities = 73/237 (30%), Positives = 128/237 (54%), Gaps = 23/237 (9%)

Query: 1   GDLKQFLLATRKD---SKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTS 57
           G+L  +L + R+     ++KS   +   + + K+  L +   S+  + SG    +SLS  
Sbjct: 97  GNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDV 156

Query: 58  QA-----------------VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 100
           +                  ++ ++QVA G+E ++ ++ IH+D+AARN L+S +  VKI  
Sbjct: 157 EEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICD 216

Query: 101 SGLSKDTYQK-EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
            GL++D Y+  +Y +  +A LPL+W+  E++FD  ++T+SDV+++  L+WEIF+ G  P+
Sbjct: 217 FGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPY 276

Query: 160 PDLS-DDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           P +  D++   +L+           TPE I S+   C H +P  RPTF  +V  L D
Sbjct: 277 PGVQIDEEFCRRLKEGTRMRAPEYATPE-IYSIMLDCWHNNPEDRPTFSELVEILGD 332

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score =  120 bits (303), Expect = 2e-33
 Identities = 60/190 (31%), Positives = 109/190 (57%), Gaps = 4/190 (2%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL +FL A   D+   +   +P    L+ SQ + +A Q+A G+ +++ +  +H+D+A R
Sbjct: 92  GDLNKFLRAHGPDAVLMAEGNRPA--ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATR 149

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKY-RNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NCL+  +L VKI   G+S+D Y  +YY+   + +LP+RW+P E++   +F+T+SDV++  
Sbjct: 150 NCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG 209

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEIF  G+ P+  LS+++V+  +   ++  +     P+ +  L   C    PH R  
Sbjct: 210 VVLWEIFTYGKQPWYQLSNNEVIECITQGRVL-QRPRTCPKEVYDLMLGCWQREPHMRLN 268

Query: 206 FPSIVTQLSD 215
              I + L +
Sbjct: 269 IKEIHSLLQN 278

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score =  120 bits (303), Expect = 4e-33
 Identities = 60/195 (30%), Positives = 108/195 (55%), Gaps = 12/195 (6%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL QFL         +  + K  V ++S S  + MA Q+A G++++S    +H+D+A R
Sbjct: 104 GDLNQFLSRHEP----QEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATR 159

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NCL+  + ++KI+  G+S++ Y  +YY+ +  A+LP+RW+ +E++   +F+T SDV+A+ 
Sbjct: 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFG 219

Query: 146 CLIWEIFNK-GEMPFPDLSDDQVLSQL------ESKKLCWKHSSKTPEYITSLHEKCIHP 198
             +WEI     E P+  LSD+QV+         + +++     +  P+ +  L   C   
Sbjct: 220 VTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRR 279

Query: 199 HPHQRPTFPSIVTQL 213
           +  +RP+F  I   L
Sbjct: 280 NAKERPSFQEIHATL 294

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score =  118 bits (298), Expect = 8e-33
 Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 13/166 (7%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L T   + M   V   +E++     IH+D+AARNCL+  D  VK+S  GL++     +Y 
Sbjct: 97  LGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS---- 169
             +    P++W P E      FS+KSDV+++  L+WE+F++G+MP+   S+ +V+     
Sbjct: 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA 216

Query: 170 --QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
             +L   KL        P  + ++   C H  P  RP F  +++QL
Sbjct: 217 GYRLYRPKLA-------PTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score =  118 bits (298), Expect = 1e-32
 Identities = 59/194 (30%), Positives = 106/194 (54%), Gaps = 14/194 (7%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL +FL +   D+K  +G        L+  Q + +A Q+A G+ +++    +H+D+A R
Sbjct: 92  GDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATR 151

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NCL+   L VKI   G+S+D Y  +YY+     +LP+RW+P E++   +F+T+SD++++ 
Sbjct: 152 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFG 211

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLS------QLESKKLCWKHSSKTPEYITSLHEKCIHPH 199
            ++WEIF  G+ P+  LS+ + +       +LE  + C       P  + ++ + C    
Sbjct: 212 VVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTC-------PPEVYAIMQGCWQRE 264

Query: 200 PHQRPTFPSIVTQL 213
           P QR     I ++L
Sbjct: 265 PQQRMVIKDIHSRL 278

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score =  118 bits (296), Expect = 2e-32
 Identities = 62/189 (32%), Positives = 104/189 (55%), Gaps = 13/189 (6%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL  FLL +R   +       P    L T   V     +A G+E++S K  IH+D+AAR
Sbjct: 92  GDLHTFLLMSRIGEE-------PFTLPLQT--LVRFMIDIASGMEYLSSKNFIHRDLAAR 142

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI-LPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC+++ +++V ++  GLSK  Y  +YY+   A  LP++WL  E++ D+ ++T SDV+A+ 
Sbjct: 143 NCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFG 202

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQL-ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             +WEI  +G+ P+  + + ++ + L +  +L  K      E +  L  +C  P P  RP
Sbjct: 203 VTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL--KQPPDCLEDVYELMCQCWSPEPKCRP 260

Query: 205 TFPSIVTQL 213
           +F  +  QL
Sbjct: 261 SFQHLRDQL 269

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score =  118 bits (296), Expect = 8e-32
 Identities = 74/244 (30%), Positives = 129/244 (52%), Gaps = 32/244 (13%)

Query: 1   GDLKQFLLATRK---DSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVR--SLS 55
           G+L  FL A R+     ++KS    P+ +G  +  +  +R D + ++G           S
Sbjct: 97  GNLSNFLRAKREFFSPYREKS----PKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPS 152

Query: 56  TSQAV--------------TM------AYQVALGLEHISDKRLIHKDIAARNCLISSDLS 95
           TS +               TM      ++QVA G+E ++ ++ IH+D+AARN L+S +  
Sbjct: 153 TSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNV 212

Query: 96  VKISLSGLSKDTYQK-EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
           VKI   GL++D Y+  +Y +  +A LPL+W+  E++FD  ++T+SDV+++  L+WEIF+ 
Sbjct: 213 VKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSL 272

Query: 155 GEMPFPDLS-DDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
           G  P+P +  +++   +L+         + TPE I  +   C    P +RPTF ++V  L
Sbjct: 273 GASPYPGVQINEEFCQRLKDGTRMRAPENATPE-IYRIMLACWQGDPKERPTFSALVEIL 331

Query: 214 SDAM 217
            D +
Sbjct: 332 GDLL 335

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score =  116 bits (292), Expect = 8e-32
 Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 19/210 (9%)

Query: 14  SKDKSGSGKPRV------KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVA 67
           +       KP V       GDL  FLL +R     +          L     +     +A
Sbjct: 73  ASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEK---------LPLQTLLKFMVDIA 123

Query: 68  LGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKY-RNAILPLRWLP 126
           LG+E++S++  IH+D+AARNC++  D++V ++  GLSK  Y  +YY+  R A +P++W+ 
Sbjct: 124 LGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 183

Query: 127 YEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESKKLCWKHSSKTP 185
            E++ D  +++KSDV+A+   +WEI  +G+ P+P + + ++   L    +L  K      
Sbjct: 184 IESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRL--KQPEDCL 241

Query: 186 EYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           + +  L   C    P  RPTF  +   L +
Sbjct: 242 DELYDLMYSCWRADPKDRPTFTKLREVLEN 271

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score =  115 bits (288), Expect = 4e-31
 Identities = 62/191 (32%), Positives = 106/191 (55%), Gaps = 7/191 (3%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            DL +FL+     S   S      V+S L  +  V +  Q+A G+E +S   ++HKD+A 
Sbjct: 93  SDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLAT 152

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RN L+   L+VKIS  GL ++ Y  +YYK   N++LP+RW+  EA+   +FS  SD+++Y
Sbjct: 153 RNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSY 212

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKK--LCWKHSSKTPEYITSLHEKCIHPHPHQ 202
             ++WE+F+ G  P+   S+  V+  + +++   C       P ++ +L  +C +  P +
Sbjct: 213 GVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPC---PDDCPAWVYTLMLECWNEFPSR 269

Query: 203 RPTFPSIVTQL 213
           RP F  I ++L
Sbjct: 270 RPRFKDIHSRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  114 bits (287), Expect = 4e-31
 Identities = 62/193 (32%), Positives = 96/193 (49%), Gaps = 20/193 (10%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           KG L  FL         KSG G    + L   Q V MA Q+A G+ ++  +  IH+D+AA
Sbjct: 85  KGSLLDFL---------KSGEG----KKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAA 131

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RN L+  +L  KI+  GL++     EY     A  P++W   EA     F+ KSDV+++ 
Sbjct: 132 RNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFG 191

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHE---KCIHPHPHQ 202
            L+ EI   G +P+P +++ +VL Q+E          + P     L++   +C    P +
Sbjct: 192 ILLTEIVTYGRVPYPGMTNREVLEQVERG----YRMPRPPNCPEELYDLMLQCWDKDPEE 247

Query: 203 RPTFPSIVTQLSD 215
           RPTF  + + L D
Sbjct: 248 RPTFEYLQSFLED 260

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score =  115 bits (289), Expect = 7e-31
 Identities = 57/169 (33%), Positives = 98/169 (57%), Gaps = 9/169 (5%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S +  VKI   GL++D Y+  +Y
Sbjct: 176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY 235

Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D+      
Sbjct: 236 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---- 291

Query: 173 SKKLCWKHSSKTPEYITSLHEK----CIHPHPHQRPTFPSIVTQLSDAM 217
            ++L      + P+Y T    +    C H  P QRPTF  +V  L + +
Sbjct: 292 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score =  114 bits (286), Expect = 8e-31
 Identities = 62/186 (33%), Positives = 107/186 (57%), Gaps = 17/186 (9%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRS--LSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
           GDL +FL A   D+      G+PR     L  SQ + +A Q+A G+ +++ +  +H+D+A
Sbjct: 92  GDLNKFLRAHGPDAMILV-DGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLA 150

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYYKY-RNAILPLRWLPYEAVFDDEFSTKSDVYA 143
            RNCL+ ++L VKI   G+S+D Y  +YY+   + +LP+RW+P E++   +F+T+SDV++
Sbjct: 151 TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 210

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLS------QLESKKLCWKHSSKTPEYITSLHEKCIH 197
           +  ++WEIF  G+ P+  LS+ +V+        LE  ++C       P+ +  +   C  
Sbjct: 211 FGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVC-------PKEVYDIMLGCWQ 263

Query: 198 PHPHQR 203
             P QR
Sbjct: 264 REPQQR 269

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score =  114 bits (287), Expect = 9e-31
 Identities = 62/190 (32%), Positives = 109/190 (57%), Gaps = 3/190 (1%)

Query: 26  KGDLKQFLLATRKDSKDKSGS-GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
           KG+L+++L A R    + S    +     ++    V+  YQVA G+E+++ ++ IH+D+A
Sbjct: 105 KGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA 164

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           ARN L++ +  +KI+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV++
Sbjct: 165 ARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 224

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
           +  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P  R
Sbjct: 225 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAIPSHR 283

Query: 204 PTFPSIVTQL 213
           PTF  +V  L
Sbjct: 284 PTFKQLVEDL 293

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score =  113 bits (284), Expect = 2e-30
 Identities = 60/207 (28%), Positives = 117/207 (56%), Gaps = 19/207 (9%)

Query: 27  GDLKQFLLATRK---------DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR 77
           G L+ FL  +RK          +++ S    P  R+L+    ++ A+Q++ G++++++ +
Sbjct: 88  GSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK 147

Query: 78  LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFS 136
           L+H+D+AARN L++    +KIS  GLS+D Y+++ Y K     +P++W+  E++FD  ++
Sbjct: 148 LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYT 207

Query: 137 TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTP----EYITSLH 192
           T+SDV+++  L+WEI   G  P+P ++ +++ + L++      +  + P    E + +L 
Sbjct: 208 TQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKT-----GYRMERPENCSEEMYNLM 262

Query: 193 EKCIHPHPHQRPTFPSIVTQLSDAMCN 219
             C    P +RPTF  I  +L   M  
Sbjct: 263 LTCWKQEPDKRPTFADISKELEKMMVK 289

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score =  112 bits (281), Expect = 2e-30
 Identities = 48/162 (29%), Positives = 88/162 (54%), Gaps = 1/162 (0%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           +    SQ + M   V  G+ ++  K+ IH+D+AARNCL+     VK+S  GLS+     E
Sbjct: 95  KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154

Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y     +  P+RW P E +   +FS+KSDV+A+  L+WE+++ G+MP+   ++ + + ++
Sbjct: 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV 214

Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
                 ++      E + ++   C H    +RPTF  +++ +
Sbjct: 215 SQGLRLYR-PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score =  112 bits (282), Expect = 4e-30
 Identities = 59/191 (30%), Positives = 106/191 (55%), Gaps = 11/191 (5%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL QFL     +S     +  P   S+S +  + MA Q+A G+++++    +H+D+A R
Sbjct: 102 GDLNQFLSQREIESTFTHANNIP---SVSIANLLYMAVQIASGMKYLASLNFVHRDLATR 158

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NCL+ +  ++KI+  G+S++ Y  +YY+ +  A+LP+RW+ +E++   +F+T SDV+A+ 
Sbjct: 159 NCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFG 218

Query: 146 CLIWEIFNK-GEMPFPDLSDDQVLSQL------ESKKLCWKHSSKTPEYITSLHEKCIHP 198
             +WE+F    E P+  LSD+QV+         + +++    +   P  +  L  +C   
Sbjct: 219 VTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSR 278

Query: 199 HPHQRPTFPSI 209
               RPTF  I
Sbjct: 279 DIKDRPTFNKI 289

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score =  110 bits (278), Expect = 8e-30
 Identities = 50/156 (32%), Positives = 86/156 (55%), Gaps = 3/156 (1%)

Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-YQKEYYKYRNA-I 119
           +A+QVA+G+ ++  K  +H+D+AARN L+ +    KIS  G+S+      +YY+   A  
Sbjct: 100 LAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGR 159

Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            PL+W   E +   +FS+KSDV++Y   +WE F+ G  P+ ++   +V++ LES +   +
Sbjct: 160 WPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPR 219

Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
              + P+ I S+   C    P  RPTF  + +    
Sbjct: 220 -PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score =  111 bits (279), Expect = 1e-29
 Identities = 61/197 (30%), Positives = 110/197 (55%), Gaps = 16/197 (8%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVR------SLSTSQAVTMAYQVALGLEHISDKRLIH 80
           GDL QFL +   D  DK  +G   V       ++S S  + +A Q+A G++++S    +H
Sbjct: 104 GDLNQFLSSHHLD--DKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161

Query: 81  KDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKS 139
           +D+A RNCL+  +L++KI+  G+S++ Y  +YY+ +  A+LP+RW+ +E +   +F+T S
Sbjct: 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTAS 221

Query: 140 DVYAYACLIWEIFNK-GEMPFPDLSDDQVLSQL------ESKKLCWKHSSKTPEYITSLH 192
           DV+A+   +WEI     E P+ +L+D+QV+         + +++        P+ +  L 
Sbjct: 222 DVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELM 281

Query: 193 EKCIHPHPHQRPTFPSI 209
            +C      +RP+F  I
Sbjct: 282 LQCWSRDCRERPSFSDI 298

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score =  111 bits (279), Expect = 1e-29
 Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 1/163 (0%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L+    ++ +YQVA G+  ++ K  IH+D+AARN L++    VKI   GL++D      Y
Sbjct: 138 LTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNY 197

Query: 114 KYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
             + NA LP++W+  E++F+  ++ +SDV++Y  L+WEIF+ G  P+P +  D    +L 
Sbjct: 198 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLI 257

Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
            +          P  I  + + C    P +RPTF  IV  +  
Sbjct: 258 KEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score =  110 bits (277), Expect = 1e-29
 Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G+L+ +L    K S             L  +  +  +YQ++  L ++  KR +H+DIAA
Sbjct: 90  LGELRSYL-QVNKYS-------------LDLASLILYSYQLSTALAYLESKRFVHRDIAA 135

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RN L+SS   VK+   GLS+    + YYK     LP++W+  E++    F++ SDV+ + 
Sbjct: 136 RNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 195

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
             +WEI   G  PF  + ++ V+ ++E+ +         P  + SL  KC    P +RP 
Sbjct: 196 VCMWEILMLGVKPFQGVKNNDVIGRIENGERLPM-PPNCPPTLYSLMTKCWAYDPSKRPR 254

Query: 206 FPSIVTQLSD 215
           F  +  QLSD
Sbjct: 255 FTELKAQLSD 264

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score =  110 bits (276), Expect = 2e-29
 Identities = 60/193 (31%), Positives = 107/193 (55%), Gaps = 13/193 (6%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL  FLL +R     +          L T   V     +A G+E++S K  IH+D+AAR
Sbjct: 91  GDLHSFLLYSRLGDCPQY---------LPTQMLVKFMTDIASGMEYLSSKSFIHRDLAAR 141

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKY-RNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC+++ +++V ++  GLSK  Y  +YY+  R A +P++W+  E++ D  ++TKSDV+++ 
Sbjct: 142 NCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFG 201

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQL-ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             +WEI  +G+ P+P + + ++   L +  +L  K      + + SL   C   +P  RP
Sbjct: 202 VTMWEIATRGQTPYPGVENSEIYDYLRQGNRL--KQPPDCLDGLYSLMSSCWLLNPKDRP 259

Query: 205 TFPSIVTQLSDAM 217
           +F ++  +L  A+
Sbjct: 260 SFETLRCELEKAL 272

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score =  109 bits (274), Expect = 2e-29
 Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 20/190 (10%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSL-STSQAVTMAYQVALGLEHISDKRLIHKDIA 84
           KG+L  FL              + R R+L S  Q +  +  VA G+E++  K+L+H+D+A
Sbjct: 82  KGNLVNFL--------------RTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLA 127

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           ARN L+S D   K+S  GL++           N+ LP++W   EA+   +FS+KSDV++Y
Sbjct: 128 ARNILVSEDGVAKVSDFGLAR----VGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSY 183

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             L+WE+F+ G  P+P +S  +V   +E K    +     P  +  L   C    P +RP
Sbjct: 184 GVLLWEVFSYGRAPYPKMSLKEVKECVE-KGYRMEPPEGCPADVYVLMTSCWETEPKKRP 242

Query: 205 TFPSIVTQLS 214
           +F  +  +L 
Sbjct: 243 SFHKLREKLE 252

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  107 bits (269), Expect = 2e-28
 Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 5/166 (3%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R+L   Q + MA QVA G+ ++  +  IH+D+AARN L+  +   K++  GL++   +  
Sbjct: 98  RALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157

Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y     A  P++W   EA   + FS KSDV+++  L+ EI   G MP+P +++ +VL Q+
Sbjct: 158 YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQV 217

Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           +   +  C       P+ +  +   C    P  RPTF ++  +L D
Sbjct: 218 DQGYRMPC---PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  106 bits (267), Expect = 4e-28
 Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 15/171 (8%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-Y 112
            +  Q V M   +A G++++S+   +H+D+AARN L++S+L  K+S  GLS+     E  
Sbjct: 103 FTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT 162

Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
           Y  +   +P+RW   EA+   +F++ SDV+++  ++WE+ + GE P+ D+S+  V+  +E
Sbjct: 163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVE 222

Query: 173 S------KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
                     C       P  +  L   C     ++RPTF  IV+ L D M
Sbjct: 223 DGYRLPPPMDC-------PSALYQLMLDCWQKDRNERPTFSQIVSTL-DKM 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score =  106 bits (266), Expect = 4e-28
 Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 2/170 (1%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 107
           K  +     S     A Q+A G+ ++  KR IH+D+AARN L++SD  VKI   GL +  
Sbjct: 88  KDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRAL 147

Query: 108 YQ-KEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD 165
            Q +++Y    +  +P  W   E++    FS  SDV+ +   +WE+F  GE P+  LS  
Sbjct: 148 PQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS 207

Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           Q+L +++ +    +     P+ I ++  +C   +P  RPTF ++   L +
Sbjct: 208 QILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score =  106 bits (265), Expect = 6e-28
 Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 3/162 (1%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           LS    ++M   V  G+E++     IH+D+AARNCL+SS   VK+S  G+++     EY 
Sbjct: 97  LSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-E 172
               A  P++W P E     ++S+KSDV+++  L+WE+F +G+MPF   S+ +V+  +  
Sbjct: 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISR 216

Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
             +L     +     +  +   C H  P  RPTF  ++  ++
Sbjct: 217 GFRLYRPKLA--SMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score =  105 bits (264), Expect = 7e-28
 Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 18/169 (10%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L+  + + M+   A G+E++  K  IH+D+AARNCL+  +  +KIS  G+S++     Y 
Sbjct: 90  LTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT 149

Query: 114 ---KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
                +   +P++W   EA+    ++++SDV++Y  L+WE F+ G+ P+P +S+ Q   +
Sbjct: 150 VSDGLKQ--IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRER 207

Query: 171 LES------KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
           +ES       +LC       PE I  L  +C    P  RP+F  I  +L
Sbjct: 208 IESGYRMPAPQLC-------PEEIYRLMLQCWAYDPENRPSFSEIYNEL 249

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  105 bits (264), Expect = 9e-28
 Identities = 56/191 (29%), Positives = 101/191 (52%), Gaps = 19/191 (9%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           KG L  FL               P  + L  +  + MA QVA G+ ++ ++  IH+D+AA
Sbjct: 86  KGSLLAFL-------------RSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAA 132

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RN L+  DL  K++  GL++   +++ Y   +  +P +W   EA     FSTKSDV+++ 
Sbjct: 133 RNILVGEDLVCKVADFGLAR-LIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFG 191

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
            L++E+F  G++P+P +++ +V  Q+ +  +  C    +K P+ I  +  +C    P  R
Sbjct: 192 ILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPC---PAKCPQEIYKIMLECWAAEPEDR 248

Query: 204 PTFPSIVTQLS 214
           P+F ++  +L 
Sbjct: 249 PSFKALREELD 259

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  103 bits (258), Expect = 7e-27
 Identities = 51/163 (31%), Positives = 92/163 (56%), Gaps = 9/163 (5%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           ++ +Q +  A  V  G+E++ +K  +H+D+AARN L+S DL  K+S  GL+K+       
Sbjct: 99  ITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKE----ASQ 154

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
              +  LP++W   EA+ + +FSTKSDV+++  L+WEI++ G +P+P +    V+  +E 
Sbjct: 155 GQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK 214

Query: 174 KKLCWKHSS--KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
               ++  +    P  +  + + C    P +RPTF  +  QL+
Sbjct: 215 G---YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score =  101 bits (252), Expect = 5e-26
 Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 1/150 (0%)

Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A 
Sbjct: 107 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 166

Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +
Sbjct: 167 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KGYRME 225

Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
                P  +  L   C   +P  RP+F  I
Sbjct: 226 RPEGCPPKVYELMRACWQWNPSDRPSFAEI 255

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score =  100 bits (251), Expect = 9e-26
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 35/206 (16%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK +L + RK     +    P   +L       MA ++ALGL H+     IH D+A R
Sbjct: 80  GDLKGYLRSCRK-----AELMTPDPTTLQR-----MACEIALGLLHLHKNNFIHSDLALR 129

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI-LPLRWLPYEAVFDDEF---------S 136
           NCL+++DL+VKI   GLS + Y+++YY   + + +PLRW+  E V  DE          +
Sbjct: 130 NCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELV--DEVHGNLLVVDQT 187

Query: 137 TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS--------QLESKKLCWKHSSKTPEYI 188
            +S+V++    IWE+F  G  P+  LSD+QVL+        +L   +L    S    +  
Sbjct: 188 KESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLS----DRW 243

Query: 189 TSLHEKCIHPHPHQRPTFPSIVTQLS 214
             + + C    P QRP+   +   LS
Sbjct: 244 YEVMQFCWLQ-PEQRPSAEEVHLLLS 268

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score =  100 bits (249), Expect = 2e-25
 Identities = 58/189 (30%), Positives = 105/189 (55%), Gaps = 4/189 (2%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           G+L  FL  +R    D + + +    S L++ Q +  A  VA G++++S+K+ IH+D+AA
Sbjct: 88  GNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAA 147

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RN L+  +L+ KI+  GLS+   ++ Y K     LP+RW+  E++    ++TKSDV+++ 
Sbjct: 148 RNVLVGENLASKIADFGLSRG--EEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFG 205

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            L+WEI + G  P+  ++  ++  +L  +    +      + +  L  +C    P++RP 
Sbjct: 206 VLLWEIVSLGGTPYCGMTCAELYEKL-PQGYRMEKPRNCDDEVYELMRQCWRDRPYERPP 264

Query: 206 FPSIVTQLS 214
           F  I  QLS
Sbjct: 265 FAQISVQLS 273

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 99.4 bits (247), Expect = 2e-25
 Identities = 64/192 (33%), Positives = 94/192 (48%), Gaps = 18/192 (9%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           KG L  FL         K G GK     L   Q V MA Q+A G+ +I     IH+D+ A
Sbjct: 84  KGSLLDFL---------KEGDGK----YLKLPQLVDMAAQIADGMAYIERMNYIHRDLRA 130

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            N L+  +L  KI+  GL++     EY   + A  P++W   EA     F+ KSDV+++ 
Sbjct: 131 ANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 190

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
            L+ E+  KG +P+P + + +VL Q+E   +  C       PE +  L + C    P +R
Sbjct: 191 ILLTELVTKGRVPYPGMVNREVLEQVERGYRMPC---PQGCPESLHELMKLCWKKDPDER 247

Query: 204 PTFPSIVTQLSD 215
           PTF  I + L D
Sbjct: 248 PTFEYIQSFLED 259

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 97.8 bits (243), Expect = 7e-25
 Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 1/161 (0%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L T Q V  A   A G+ ++  K  IH+D+AARNCL+  +  +KIS  G+S+      Y 
Sbjct: 90  LKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS 149

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
                 +P++W   EA+    +S++SDV++Y  L+WE F+ G  P+P +++ Q   Q+E 
Sbjct: 150 SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE- 208

Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           K        K P+ +  + ++C    P  RP F  +  +L+
Sbjct: 209 KGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score =   99 bits (249), Expect = 8e-25
 Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 6/181 (3%)

Query: 35  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 94
           +  KD +D   S       L     +  + QVA G++ ++ K  IH+D+AARN L++   
Sbjct: 195 SDSKDEEDTEDS-----WPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR 249

Query: 95  SVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN 153
             KI   GL++D      Y  + NA LP++W+  E++FD  ++ +SDV++Y  L+WEIF+
Sbjct: 250 VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 309

Query: 154 KGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
            G+ P+P +  +    ++  +          P  I S+ + C +  P +RPTF  I   +
Sbjct: 310 LGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLI 369

Query: 214 S 214
            
Sbjct: 370 Q 370

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 97.4 bits (242), Expect = 1e-24
 Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 24/195 (12%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           KG L  FL         K G G    R+L     V MA QVA G+ +I     IH+D+ +
Sbjct: 84  KGSLLDFL---------KDGEG----RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRS 130

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            N L+   L  KI+  GL++     EY   + A  P++W   EA     F+ KSDV+++ 
Sbjct: 131 ANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 190

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLES--KKLCWKHSSKTPEYITSLHE---KCIHPHP 200
            L+ E+  KG +P+P +++ +VL Q+E   +  C +          SLHE   +C    P
Sbjct: 191 ILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCP------ISLHELMLQCWKKDP 244

Query: 201 HQRPTFPSIVTQLSD 215
            +RPTF  + + L D
Sbjct: 245 EERPTFEYLQSFLED 259

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 97.6 bits (243), Expect = 1e-24
 Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 18/152 (11%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK +L   R +    +   +  V          MA +VA GL  +     IH D+A R
Sbjct: 80  GDLKNYL---RSNRGMVAQMAQKDVLQ-------RMACEVASGLLWLHQADFIHSDLALR 129

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRNA-ILPLRWLPYEAV--FDDEFST-----K 138
           NC +++DLSVKI   GL+ + Y ++YY  ++   +PLRWL  E V     +        K
Sbjct: 130 NCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKK 189

Query: 139 SDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
           S++++    +WE+F   + P+PDLSD+QVL Q
Sbjct: 190 SNIWSLGVTMWELFTAADQPYPDLSDEQVLKQ 221

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 99.3 bits (247), Expect = 2e-24
 Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 14/192 (7%)

Query: 16  DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD 75
           D+  S K     ++K  L      S D S         L+T   ++  YQVA G+E ++ 
Sbjct: 209 DRPASYKGSNDSEVKNLL------SDDGS-------EGLTTLDLLSFTYQVARGMEFLAS 255

Query: 76  KRLIHKDIAARNCLISSDLSVKISLSGLSKD-TYQKEYYKYRNAILPLRWLPYEAVFDDE 134
           K  +H+D+AARN L++    VKI   GL++D  +   Y    +  LP++W+  E++FD+ 
Sbjct: 256 KNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNL 315

Query: 135 FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEK 194
           ++T SDV++Y  L+WEIF+ G  P+P +  D                    + +  +  K
Sbjct: 316 YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVK 375

Query: 195 CIHPHPHQRPTF 206
           C +  P +RP+F
Sbjct: 376 CWNSEPEKRPSF 387

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 97.1 bits (242), Expect = 2e-24
 Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 15/163 (9%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ +KRL+H+D+AARN L+ +   VKI+  GL+K  D  +KEY       +P+
Sbjct: 117 QIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEY-HAEGGKVPI 175

Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ KSDV++Y   +WE+   G  P+  +   ++   LE      K   
Sbjct: 176 KWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLE------KGER 229

Query: 183 KTPEYITSLH-----EKCIHPHPHQRPTFPSIVTQLSDAMCND 220
                I ++       KC       RPTF  ++ + S  M  D
Sbjct: 230 LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFS-KMARD 271

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 96.3 bits (239), Expect = 3e-24
 Identities = 57/188 (30%), Positives = 100/188 (53%), Gaps = 4/188 (2%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           G+L  FL  +R    D + +      S LS+ Q +  A  VA G++++S K+ IH+D+AA
Sbjct: 81  GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 140

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RN L+  +   KI+  GLS+   Q+ Y K     LP+RW+  E++    ++T SDV++Y 
Sbjct: 141 RNILVGENYVAKIADFGLSRG--QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 198

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            L+WEI + G  P+  ++  ++  +L  +    +      + +  L  +C    P++RP+
Sbjct: 199 VLLWEIVSLGGTPYCGMTCAELYEKL-PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPS 257

Query: 206 FPSIVTQL 213
           F  I+  L
Sbjct: 258 FAQILVSL 265

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 95.4 bits (237), Expect = 7e-24
 Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 5/153 (3%)

Query: 63  AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL 122
           +  V   +E++     +H+D+AARN L+S D   K+S  GL+K+    +        LP+
Sbjct: 108 SLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPV 163

Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W   EA+ + +FSTKSDV+++  L+WEI++ G +P+P +    V+ ++E K        
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPD 222

Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             P  +  + ++C H     RP+F  +  QL  
Sbjct: 223 GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 95.3 bits (237), Expect = 8e-24
 Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 1/162 (0%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L+ ++ + MA Q+A G+  I  K  IH+D+ A N L+S  L  KI+  GL++     EY 
Sbjct: 99  LTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT 158

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
               A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+  LE 
Sbjct: 159 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE- 217

Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           +          PE +  L   C    P +RPTF  + + L D
Sbjct: 218 RGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 96.5 bits (240), Expect = 1e-23
 Identities = 51/159 (32%), Positives = 87/159 (54%), Gaps = 1/159 (0%)

Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
           +L T   ++ +YQVA G+  ++ K  IH+D+AARN L++     KI   GL++D      
Sbjct: 210 ALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269

Query: 113 YKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y  + NA LP++W+  E++F+  ++ +SDV++Y  L+WEIF+ G  P+P +  D    ++
Sbjct: 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM 329

Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
             +          P  +  + + C    P +RPTF  IV
Sbjct: 330 IKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIV 368

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 94.2 bits (234), Expect = 2e-23
 Identities = 43/162 (26%), Positives = 85/162 (52%), Gaps = 1/162 (0%)

Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
             S    + M   V  G+ ++    +IH+D+AARNCL+  +  VK+S  G+++     +Y
Sbjct: 96  KFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155

Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
                   P++W   E     ++S+KSDV+++  L+WE+F++G+ P+ + S+ +V+  + 
Sbjct: 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETIN 215

Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           +    +K      + +  L + C    P  RP+F  ++ QL+
Sbjct: 216 AGFRLYK-PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 94.0 bits (233), Expect = 3e-23
 Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 5/164 (3%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     EY 
Sbjct: 99  LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 158

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
             + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+E 
Sbjct: 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 218

Query: 174 --KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 219 GYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 93.5 bits (232), Expect = 3e-23
 Identities = 50/163 (30%), Positives = 88/163 (53%), Gaps = 6/163 (3%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L   + + M    A G+E++  K  IH+D+AARNCL++    +KIS  G+S++     Y 
Sbjct: 91  LKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA 150

Query: 114 KYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
                  +P++W   EA+    +S++SDV+++  L+WE F+ G +P+ +LS+ Q    +E
Sbjct: 151 STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE 210

Query: 173 S--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
              +  C       P+ +  L E+C    P QRP+F ++  +L
Sbjct: 211 QGVRLPC---PELCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 94.3 bits (234), Expect = 4e-23
 Identities = 59/189 (31%), Positives = 101/189 (53%), Gaps = 4/189 (2%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           G+L  FL  +R    D + +      S LS+ Q +  A  VA G++++S K+ IH+D+AA
Sbjct: 93  GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 152

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RN L+  +   KI+  GLS+   Q+ Y K     LP+RW+  E++    ++T SDV++Y 
Sbjct: 153 RNILVGENYVAKIADFGLSRG--QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 210

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            L+WEI + G  P+  ++  ++  +L       K  +   E +  L  +C    P++RP+
Sbjct: 211 VLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDE-VYDLMRQCWREKPYERPS 269

Query: 206 FPSIVTQLS 214
           F  I+  L+
Sbjct: 270 FAQILVSLN 278

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 94.0 bits (234), Expect = 4e-23
 Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 19/177 (10%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTYQKEY 112
           ++  + +  + Q+  G++++  +R IH+D+AARN L+ S+  VKIS  GL+K     K+Y
Sbjct: 106 INLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDY 165

Query: 113 YKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGE-----------MPFP 160
           Y  +     P+ W   E +   +FS+ SDV+++   ++E+F  G+           M   
Sbjct: 166 YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI 225

Query: 161 DLSDDQVLSQLE----SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
                 V   LE     ++L        P+ +  L + C    P  RP+F  ++  +
Sbjct: 226 AQGQMIVTRLLELLKEGERL--PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIV 280

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 95.5 bits (237), Expect = 4e-23
 Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 3/166 (1%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           LS    V  +YQVA G+E ++ K  +H+D+AARN LI     VKI   GL++D  +   Y
Sbjct: 236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY 295

Query: 114 KYRNA-ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
             + +  LPL+W+  E++F++ ++T SDV+++  L+WEIF  G  P+P+L  ++Q  + +
Sbjct: 296 ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAI 355

Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +      K +  + E I  + +KC       RP F  +V  + D +
Sbjct: 356 KRGYRMAKPAHASDE-IYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 93.8 bits (233), Expect = 4e-23
 Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 11/163 (6%)

Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQKEYY 113
           Q V M   +A G++++S+   +H+D+AARN L++S+L  K+S  GLS+    DT    Y 
Sbjct: 107 QLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 166

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
                 +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ D+S+  V++ +E 
Sbjct: 167 SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQ 226

Query: 174 KKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQL 213
                       +  T+LH+    C     + RP F  IV+ L
Sbjct: 227 D----YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTL 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 92.7 bits (230), Expect = 7e-23
 Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 19/190 (10%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           G L ++L       +D  G         S+ Q V M   +A G++++SD   +H+D+AAR
Sbjct: 91  GALDKYL-------RDHDGE-------FSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAAR 136

Query: 87  NCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           N L++S+L  K+S  GLS+  +   +  Y      +P+RW   EA+   +F++ SDV+++
Sbjct: 137 NILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSF 196

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQL-ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
             ++WE+ + GE P+ D+S+ +V+  + +  +L        P  +  L  +C      +R
Sbjct: 197 GIVMWEVMSFGERPYWDMSNHEVMKAINDGFRL--PAPMDCPSAVYQLMLQCWQQDRARR 254

Query: 204 PTFPSIVTQL 213
           P F  IV  L
Sbjct: 255 PRFVDIVNLL 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 89.3 bits (221), Expect = 1e-21
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 1/158 (0%)

Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
           + +  + Q+A G+ +I  K  IH+D+ A N L+S  L  KI+  GL++     EY     
Sbjct: 104 KLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 163

Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
           A  P++W   EA+    F+ KSDV+++  L++EI   G++P+P +S+  V+S L  +   
Sbjct: 164 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL-QRGYR 222

Query: 178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
                  P+ +  + + C      +RPTF  + + L D
Sbjct: 223 MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 89.6 bits (222), Expect = 1e-21
 Identities = 51/159 (32%), Positives = 89/159 (55%), Gaps = 5/159 (3%)

Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN L++S+L  K+S  GLS+  +   +  Y  
Sbjct: 107 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTT 166

Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 167 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY 226

Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
           +L        P  +  L   C     ++RP F  IV+ L
Sbjct: 227 RL--PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSIL 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 88.1 bits (218), Expect = 3e-21
 Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 7/161 (4%)

Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE- 111
            ++ S  V + +QV++G++++  K  +H+D+AARN L+ +    KIS  GLSK     + 
Sbjct: 91  EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS 150

Query: 112 YYKYRNA-ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
           YYK R+A   PL+W   E +   +FS++SDV++Y   +WE F+ G+ P+  +   +V+S 
Sbjct: 151 YYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSF 210

Query: 171 LESKKL--CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
           +E  K   C    ++ P  + +L + C       RP F  +
Sbjct: 211 IEQGKRLDC---PAECPPEMYALMKDCWIYKWEDRPNFAKV 248

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 88.2 bits (218), Expect = 4e-21
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 1/156 (0%)

Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           +  + Q+A G+  I  +  IH+D+ A N L+S+ L  KI+  GL++     EY     A 
Sbjct: 105 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 164

Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +S+ +V+  LE +     
Sbjct: 165 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMP 223

Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
                PE + ++  +C    P +RPTF  I + L D
Sbjct: 224 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 83.9 bits (207), Expect = 1e-19
 Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 3/164 (1%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + ++      + +QV++G++++ +   +H+D+AARN L+ +    KIS  GLSK     E
Sbjct: 90  KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADE 149

Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            YYK + +   P++W   E +   +FS+KSDV+++  L+WE F+ G+ P+  +  ++V  
Sbjct: 150 NYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQ 209

Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
            +ES +         PE +  L + C      +RP F  +  +L
Sbjct: 210 MIESGERMECPQRCPPE-MYDLMKLCWTYGVDERPGFAVVELRL 252

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 83.8 bits (208), Expect = 2e-19
 Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 8/165 (4%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
             LS  +A  +A Q+  GLE++    +IH+D+   N L+  +  VKI+  GL+K    K 
Sbjct: 93  GPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLDENGVVKIADFGLAKKLL-KS 151

Query: 112 YYKYRNAILPLRWLPYEAV-FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
                  +    ++  E +   + +  K DV++   +++E+   G+ PF   +    L  
Sbjct: 152 SSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLT-GKPPFSGENILDQLQL 210

Query: 171 LESKKLC-----WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
           +               S   E    L +KC++  P +RPT   I+
Sbjct: 211 IRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEIL 255

Length = 260

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 82.0 bits (202), Expect = 1e-18
 Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 4/152 (2%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ + RL+H+D+AARN L+ S   VKI+  GL++  D  + EY+      +P+
Sbjct: 117 QIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA-DGGKVPI 175

Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    F+ +SDV++Y   +WE+   G  P+  +   ++   LE  +   +   
Sbjct: 176 KWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPI 235

Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  +V + S
Sbjct: 236 CTID-VYMIMVKCWMIDSECRPRFRELVDEFS 266

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 79.5 bits (196), Expect = 6e-18
 Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 19/153 (12%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK +L       +    + +             MA ++A G+ H+     +H D+A R
Sbjct: 80  GDLKSYL----SQEQWHRRNSQ-------LLLLQRMACEIAAGVTHMHKHNFLHSDLALR 128

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAV--FDD-----EFSTK 138
           NC ++SDL+VK+   G+    Y+++Y +  +   +PLRWL  E V  F       E +  
Sbjct: 129 NCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKP 188

Query: 139 SDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           S+V+A    +WE+F     P+  LSD +VL+ +
Sbjct: 189 SNVWALGVTLWELFENAAQPYSHLSDREVLNHV 221

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 76.7 bits (189), Expect = 9e-17
 Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 16/180 (8%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEY 112
           L   + +  A Q+  G+E++  KR +H+D+A RN L+ S+  VKI   GL+K   Q KEY
Sbjct: 105 LDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY 164

Query: 113 YKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGE-----------MPFP 160
           YK R     P+ W   E++ + +FS  SDV+++  +++E+F   +           M   
Sbjct: 165 YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGN 224

Query: 161 DLSDDQVLSQL-ESKKLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           D     ++  L E  K   +       P  I ++ ++C +  P QRP+F  +  Q+    
Sbjct: 225 DKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 76.1 bits (187), Expect = 1e-16
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 3/162 (1%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS-LSGLSKDTYQKEY 112
           L   Q + M   +A G++++S+   +HK +AA   L++SDL  KIS    L +D  +  Y
Sbjct: 104 LVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY 163

Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
                    L W   EA+    FS+ SDV+++  ++WE+ + GE P+ D+S   V+  +E
Sbjct: 164 TTMSGKSPVL-WAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVE 222

Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
                       P  +  L   C      +RP F  I + LS
Sbjct: 223 D-GFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILS 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 75.6 bits (187), Expect = 1e-16
 Identities = 32/160 (20%), Positives = 62/160 (38%), Gaps = 5/160 (3%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
             LS  +A     Q+   LE++  K ++H+D+   N L+  D  VK++  GL++     E
Sbjct: 92  GRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGE 151

Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
             K    +    ++  E +    +    D+++   +++E+   G+ PFP       L + 
Sbjct: 152 --KLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLT-GKPPFPGDDQLLELFKK 208

Query: 172 --ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
             + K                L  K +   P +R T    
Sbjct: 209 IGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEA 248

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 76.2 bits (187), Expect = 2e-16
 Identities = 43/153 (28%), Positives = 82/153 (53%), Gaps = 6/153 (3%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ ++RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 117 QIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHA-EGGKVPI 175

Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES-KKLCWKHS 181
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  ++L     
Sbjct: 176 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 235

Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
                Y+  +  KC       RP F  ++ + S
Sbjct: 236 CTIDVYMIMV--KCWMIDADSRPKFRELIIEFS 266

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 73.8 bits (181), Expect = 9e-16
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 16/182 (8%)

Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KE 111
            L+ +Q +  A Q+  G+ ++  +  IH+D+AARN L+ +D  VKI   GL+K   +  E
Sbjct: 103 KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162

Query: 112 YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKG-----------EM-- 157
           YY+ R +   P+ W   E + +++FS  SDV+++   ++E+               EM  
Sbjct: 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIG 222

Query: 158 PFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           P         L +L  + +        P+ +  L + C       RPTF S++  L + M
Sbjct: 223 PKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE-M 281

Query: 218 CN 219
            +
Sbjct: 282 HH 283

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 73.2 bits (179), Expect = 2e-15
 Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 6/153 (3%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ ++RL+H+D+AARN L+ S   VKI+  GL++  +  +KE Y      +P+
Sbjct: 117 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE-YNADGGKMPI 175

Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES-KKLCWKHS 181
           +W+  E +   +F+ +SDV++Y   IWE+   G  P+  +   ++   LE  ++L     
Sbjct: 176 KWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPI 235

Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
                Y+  +  KC       RP F  +  + S
Sbjct: 236 CTIDVYMVMV--KCWMIDADSRPKFKELAAEFS 266

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 72.7 bits (178), Expect = 2e-15
 Identities = 43/165 (26%), Positives = 86/165 (52%), Gaps = 6/165 (3%)

Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY--QK 110
           SL   + +    Q+A G+ ++ + R++H+++AARN L+ SD  V+I+  G++   Y   K
Sbjct: 105 SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK 164

Query: 111 EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
           +Y+ Y     P++W+  E++    ++ +SDV++Y   +WE+ + G  P+  +   +V   
Sbjct: 165 KYF-YSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL 223

Query: 171 LES-KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           LE  ++L          Y+  +  KC     + RPTF  +  + +
Sbjct: 224 LEKGERLAQPQICTIDVYMVMV--KCWMIDENVRPTFKELANEFT 266

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 37/190 (19%), Positives = 68/190 (35%), Gaps = 51/190 (26%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G LK  L              K     LS  + + +  Q+  GLE++    +IH+D+  
Sbjct: 75  GGSLKDLL--------------KENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKP 120

Query: 86  RNCLISSD-LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYA 143
            N L+ SD   VK++  GLSK     +    +  +    ++  E +     +S KSD+++
Sbjct: 121 ENILLDSDNGKVKLADFGLSKL-LTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWS 179

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
              +++E+                                    +  L  K +   P +R
Sbjct: 180 LGVILYEL----------------------------------PELKDLIRKMLQKDPEKR 205

Query: 204 PTFPSIVTQL 213
           P+   I+  L
Sbjct: 206 PSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 65.7 bits (161), Expect = 5e-13
 Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 21/154 (13%)

Query: 63  AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAIL-P 121
             Q+  GL ++    ++H+DI   N L+ SD  VK++  G +K     E  +   ++   
Sbjct: 107 TRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGT 166

Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWK- 179
             W+  E +  +E+   +D+++  C + E+   G+ P+ +L +    L         +K 
Sbjct: 167 PYWMAPEVIRGEEYGRAADIWSLGCTVIEMAT-GKPPWSELGNPMAAL---------YKI 216

Query: 180 -HSSKTPEYITSLHE-------KCIHPHPHQRPT 205
             S + PE    L E       KC+   P +RPT
Sbjct: 217 GSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPT 250

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 65.7 bits (161), Expect = 6e-13
 Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 14/170 (8%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 107
           K   ++L+ SQ   +  ++  GLE++    +IH+DI A N L++SD  VK+   GLS   
Sbjct: 89  KSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSA-- 146

Query: 108 YQKEYYKYRNAIL-PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ 166
            Q    K RN ++    W+  E +    +  K+D+++      E+   G+ P+ +L   +
Sbjct: 147 -QLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAE-GKPPYSELPPMK 204

Query: 167 VL---SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
            L   +      L  ++  K  +      +KC+  +P +RPT      QL
Sbjct: 205 ALFKIATNGPPGL--RNPEKWSDEFKDFLKKCLQKNPEKRPT----AEQL 248

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 62.5 bits (152), Expect = 8e-12
 Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 21/173 (12%)

Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-------LSVKISLSGLSK 105
           ++S    + +A Q+A  L ++ DK+L+H ++  +N L++           +K+S  G+  
Sbjct: 97  NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156

Query: 106 DTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKS--DVYAYACLIWEIFNKGEMPFPDLS 163
               +E       +  + W+  E + + + S     D +++   + EI + GE P   LS
Sbjct: 157 TVLSREE-----RVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS 211

Query: 164 DDQVLSQLESKKLCWKHSSKTPEY--ITSLHEKCIHPHPHQRPTFPSIVTQLS 214
                S  + +    +H    P+   + +L  +C    P +RP+F +I+  L+
Sbjct: 212 -----SSEKERFYQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 60.2 bits (146), Expect = 5e-11
 Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 21/178 (11%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI--------SSDLSVKIS 99
           K     ++ S  + +A Q+A  L  + DK L H ++ A+N L+         +   +K+S
Sbjct: 91  KKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150

Query: 100 LSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMP 158
             G+S     KE    R     + W+P E + + +  S  +D +++   +WEIF+ G+ P
Sbjct: 151 DPGISITVLPKEILLER-----IPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP 205

Query: 159 FPDLSDDQVLSQLESKKLCWKHSSKTPEYI--TSLHEKCIHPHPHQRPTFPSIVTQLS 214
              L   + L   E      +H    P++    +L  +C+   P  RP+F +I+  L+
Sbjct: 206 LSALDSQKKLQFYED-----RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 60.2 bits (146), Expect = 6e-11
 Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 15/150 (10%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP--- 121
           Q+  GL ++ ++ +IH+DI   N L+ +   +KIS  G+SK           N   P   
Sbjct: 114 QILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQ 173

Query: 122 --LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
             + W+  E V    ++ K+D+++  CL+ E+   G+ PFPD +  Q + ++        
Sbjct: 174 GSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLT-GKHPFPDCTQLQAIFKIGENA---- 228

Query: 180 HSSKTPEYITS----LHEKCIHPHPHQRPT 205
            S + P  I+S      EK      ++RPT
Sbjct: 229 -SPEIPSNISSEAIDFLEKTFEIDHNKRPT 257

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 59.8 bits (145), Expect = 9e-11
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 24/197 (12%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL + +   +K             R +          Q+   LEH+  KR++H+DI   
Sbjct: 87  GDLSRMIKHFKKQK-----------RLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPA 135

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
           N  I++   VK+   GL +    K    +     P    P E + ++ ++ KSD+++  C
Sbjct: 136 NVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP-ERIHENGYNFKSDIWSLGC 194

Query: 147 LIWEI------FNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHP 200
           L++E+      F   +M    L   + + + +   L   H S   E +  L  +CI+P P
Sbjct: 195 LLYEMAALQSPFYGDKMNLYSLC--KKIEKCDYPPLPADHYS---EELRDLVSRCINPDP 249

Query: 201 HQRPTFPSIVTQLSDAM 217
            +RP   S V Q++  M
Sbjct: 250 EKRPDI-SYVLQVAKEM 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 40/206 (19%), Positives = 74/206 (35%), Gaps = 37/206 (17%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           G+L Q++                +  SL        A ++ L LE++  K +IH+D+   
Sbjct: 87  GELLQYIR---------------KYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPE 131

Query: 87  NCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPLRWLPY----------------- 127
           N L+  D+ +KI+  G +K  D          +A      +                   
Sbjct: 132 NILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSP 191

Query: 128 EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEY 187
           E + +      SD++A  C+I+++   G+ PF   ++     ++   KL +      P  
Sbjct: 192 ELLNEKPAGKSSDLWALGCIIYQMLT-GKPPFRGSNEYLTFQKI--LKLEYSFPPNFPPD 248

Query: 188 ITSLHEKCIHPHPHQRPTFPSIVTQL 213
              L EK +   P  R        +L
Sbjct: 249 AKDLIEKLLVLDPQDRLGVNEGYDEL 274

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 58.8 bits (142), Expect = 2e-10
 Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 31/192 (16%)

Query: 44  SGSGK---PR-VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 99
           SGS K   PR    ++  Q +  A Q+  G++++  ++ +H+D+AARN L+ S+  VKI 
Sbjct: 92  SGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 151

Query: 100 LSGLSKDTY-QKEYYKYRNAI-LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF----- 152
             GL+K     KEYY  ++ +  P+ W   E +   +F   SDV+++   ++E+      
Sbjct: 152 DFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDS 211

Query: 153 --------------NKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHP 198
                           G+M    L   +VL   E K+L        PE +  L  KC   
Sbjct: 212 ESSPMTLFLKMIGPTHGQMTVTRLV--RVLE--EGKRL--PRPPNCPEEVYQLMRKCWEF 265

Query: 199 HPHQRPTFPSIV 210
            P +R TF +++
Sbjct: 266 QPSKRTTFQNLI 277

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 10/172 (5%)

Query: 52  RSLSTSQAVTMAYQVALGLE--HISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           + LS    + MA     GL   +    +  +K++ + + L++ +  +KI   GL K    
Sbjct: 117 KDLSFKTKLDMAIDCCKGLYNLYKYTNK-PYKNLTSVSFLVTENYKLKIICHGLEK-ILS 174

Query: 110 KEYYKYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
              +K  N ++   +  Y+ + D   E++ K D+Y+   ++WEIF  G++PF +L+  ++
Sbjct: 175 SPPFKNVNFMV---YFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFT-GKIPFENLTTKEI 230

Query: 168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
              + +K    K     P  I  + E C      +RP    I+  LS     
Sbjct: 231 YDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKFY 282

Length = 283

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 55.8 bits (134), Expect = 2e-09
 Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 13/159 (8%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
           Q+   +EH+  +R++H+DI   N  I++   VK+   GL +    K    +     P   
Sbjct: 114 QLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYM 173

Query: 125 LPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEMPFPDLSDDQVLSQLESKKLCW 178
            P E + ++ ++ KSD+++  CL++E+      F   +M    L   Q + Q +   L  
Sbjct: 174 SP-ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLC--QKIEQCDYPPLPT 230

Query: 179 KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +H S+    + S+   CI+P P QRP     V Q++  M
Sbjct: 231 EHYSEKLRELVSM---CIYPDPDQRPDI-GYVHQIAKQM 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 52.8 bits (125), Expect = 3e-08
 Identities = 38/177 (21%), Positives = 66/177 (37%), Gaps = 21/177 (11%)

Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-VKISLSGLSK-- 105
            R   LS S+A+ +  Q+   LE++  K +IH+DI   N L+  D   VK+   GL+K  
Sbjct: 93  GRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLL 152

Query: 106 ---DTYQKEYYKYRNAILPLRWLPYEAVFDDEF---STKSDVYAYACLIWEIFNKGEMPF 159
               +          ++    ++  E +        S+ SD+++    ++E+   G  PF
Sbjct: 153 PDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLT-GLPPF 211

Query: 160 PDLSDDQVLSQLESKKLCWKHSSKTPEYITS-----------LHEKCIHPHPHQRPT 205
               +    SQ     L     S       S           L +K +   P  R +
Sbjct: 212 EGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLS 268

Length = 384

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 51.1 bits (122), Expect = 8e-08
 Identities = 38/166 (22%), Positives = 78/166 (46%), Gaps = 18/166 (10%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-------LSVKISLSGLSKD 106
           L+T     +A Q+A  L ++ DK L+H ++  +N L++ +         +K+S  G+   
Sbjct: 102 LTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPIT 161

Query: 107 TYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDD 165
              ++       +  + W+  E V D +  S  +D +++   +WEI   GE+P      D
Sbjct: 162 VLSRQ-----ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPL----KD 212

Query: 166 QVLSQLES-KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
           + L++ E   +      + + + +  L   C++  P+QRP F +I+
Sbjct: 213 KTLAEKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIM 258

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 50.3 bits (121), Expect = 1e-07
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)

Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAIL-PL 122
           YQV  GL ++ ++ +IH+DI A N L + D  VK++  G++  T   +  K   +++   
Sbjct: 106 YQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVA--TKLNDVSKDDASVVGTP 163

Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL 162
            W+  E +     ST SD+++  C + E+   G  P+ DL
Sbjct: 164 YWMAPEVIEMSGASTASDIWSLGCTVIELLT-GNPPYYDL 202

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 13/134 (9%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
           Q+  GL +   K  +H+DI   N L+++   +K++  GL++    +E   Y N ++ L +
Sbjct: 124 QLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWY 183

Query: 125 LPYEAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES-KKLC----- 177
            P E +  +E    + DV++  C++ E+F K     P    +Q L+QLE   +LC     
Sbjct: 184 RPPELLLGEERYGPAIDVWSCGCILGELFTKK----PIFQANQELAQLELISRLCGSPCP 239

Query: 178 --WKHSSKTPEYIT 189
             W    K P + T
Sbjct: 240 AVWPDVIKLPYFNT 253

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 49.3 bits (117), Expect = 3e-07
 Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 9/155 (5%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L  +   T+  ++  GL+++  +R IH+DI A N L+S    VK++  G++      +  
Sbjct: 98  LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
           +      P  W+  E +    +  K+D+++      E+  KGE P  DL   +VL  +  
Sbjct: 158 RNTFVGTPF-WMAPEVIKQSAYDFKADIWSLGITAIEL-AKGEPPNSDLHPMRVLFLIPK 215

Query: 174 KK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
                L  ++S    E++    E C++  P  RPT
Sbjct: 216 NSPPTLEGQYSKPFKEFV----EACLNKDPRFRPT 246

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 48.9 bits (116), Expect = 4e-07
 Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 12/146 (8%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
           Q+   LEH+  +R++H+DI   N  I++   VK+   GL +    K    +     P   
Sbjct: 114 QLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYM 173

Query: 125 LPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEMPFPDLSDDQVLSQLESKKLCW 178
            P E + ++ ++ KSD+++  CL++E+      F   +M    L   + + Q +   L  
Sbjct: 174 SP-ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPS 230

Query: 179 KHSSKTPEYITSLHEKCIHPHPHQRP 204
            H S   E +  L   CI+P P +RP
Sbjct: 231 DHYS---EELRQLVNMCINPDPEKRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 48.7 bits (116), Expect = 6e-07
 Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 18/180 (10%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDL + L   R              R L   Q      Q+ LGL H+  K+++H+DI +
Sbjct: 83  NGDLHKLLKMQRG-------------RPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKS 129

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            N  + +  +VKI   G++K       +       P  +L  E   D  ++ KSDV+A  
Sbjct: 130 LNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPY-YLSPELCEDKPYNEKSDVWALG 188

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH-SSKTPEYITSLHEKCIHPHPHQRP 204
            +++E    G+ PF   +++Q    L+  +  +   S    + +  L ++C+     QRP
Sbjct: 189 VVLYECCT-GKHPFD--ANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRP 245

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 48.0 bits (115), Expect = 9e-07
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 23/130 (17%)

Query: 28  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 87
           DL  +L         K G     ++ L          Q+  G++ +   R++H+D+  +N
Sbjct: 91  DLATYL-----SKCPKPGLPPETIKDLM--------RQLLRGVDFLHSHRIVHRDLKPQN 137

Query: 88  CLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP----LRWLPYEAVFDDEFSTKSDVYA 143
            L++SD  VKI+  GL++       Y +  A+      L +   E +    ++T  D+++
Sbjct: 138 ILVTSDGQVKIADFGLAR------IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWS 191

Query: 144 YACLIWEIFN 153
             C+  E+F 
Sbjct: 192 VGCIFAELFR 201

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 12/154 (7%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-QKEY 112
           L    A     +V LG+E +  + +IH+DI   N LI     +K++  GLS++    K++
Sbjct: 94  LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKF 153

Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
               + + P      E +        SD ++  C+I+E F  G  PF   + D V   + 
Sbjct: 154 VGTPDYLAP------ETILGVGDDKMSDWWSLGCVIFE-FLFGYPPFHAETPDAVFDNIL 206

Query: 173 SKKLCW---KHSSKTPEYITSLHEKCIHPHPHQR 203
           S+++ W        +PE +  L  + +   P +R
Sbjct: 207 SRRINWPEEVKEFCSPEAV-DLINRLLCMDPAKR 239

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 12/162 (7%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEY 112
            S  Q ++   Q++LGL+HI D++++H+DI ++N  +S +  V K+   G+++       
Sbjct: 98  FSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157

Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
             Y     P  +L  E   +  ++ K+D+++  C+++E+    + PF   +  Q++    
Sbjct: 158 LAYTCVGTPY-YLSPEICQNRPYNNKTDIWSLGCVLYELCTL-KHPFEGNNLHQLVL--- 212

Query: 173 SKKLCWKHSSK-TPEYITSLH---EKCIHPHPHQRPTFPSIV 210
             K+C  + +  +P +   L     +     P  RP+  SI+
Sbjct: 213 --KICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSIL 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 47.4 bits (112), Expect = 2e-06
 Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 9/155 (5%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L  +Q  T+  ++  GL+++  ++ IH+DI A N L+S    VK++  G++      +  
Sbjct: 98  LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 157

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
           +      P  W+  E +    + +K+D+++      E+  KGE P  +L   +VL  +  
Sbjct: 158 RNTFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-AKGEPPHSELHPMKVLFLIPK 215

Query: 174 KK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
                L   +S    E++    E C++  P  RPT
Sbjct: 216 NNPPTLEGNYSKPLKEFV----EACLNKEPSFRPT 246

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 47.4 bits (112), Expect = 2e-06
 Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 9/151 (5%)

Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
           Q  TM  ++  GL+++  ++ IH+DI A N L+S    VK++  G++      +  +   
Sbjct: 102 QIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161

Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL---SQLESK 174
              P  W+  E +    + +K+D+++      E+  KGE P  D+   +VL    +    
Sbjct: 162 VGTPF-WMAPEVIQQSAYDSKADIWSLGITAIEL-AKGEPPNSDMHPMRVLFLIPKNNPP 219

Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            L  + S    E+I    + C++  P  RPT
Sbjct: 220 TLTGEFSKPFKEFI----DACLNKDPSFRPT 246

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 34/148 (22%), Positives = 73/148 (49%), Gaps = 5/148 (3%)

Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
           +AV  A ++  GLE +  +R++++D+   N L+     ++IS  GL+ +  + E  + R 
Sbjct: 103 RAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGR- 161

Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES--KK 175
            +  + ++  E V ++ ++   D +   CLI+E+  +G+ PF    +     ++E   K+
Sbjct: 162 -VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMI-EGKSPFRQRKEKVKREEVERRVKE 219

Query: 176 LCWKHSSKTPEYITSLHEKCIHPHPHQR 203
              ++S K  E   S+  + +   P  R
Sbjct: 220 DQEEYSEKFSEAARSICRQLLTKDPGFR 247

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 24/167 (14%)

Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLIS-------SDLSVKISLSGLSKDTYQKEY 112
           +T+A Q+A  L ++ DK L+H ++ A+N L++       +   +K+S  G+S     +E 
Sbjct: 120 ITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREE 179

Query: 113 YKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
              R     + W+  E V   +  ST +D +++   + EI   GE+P  + +  +     
Sbjct: 180 RVER-----IPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE----- 229

Query: 172 ESKKLCWKHSSKTPE----YITSLHEKCIHPHPHQRPTFPSIVTQLS 214
             K+  ++   + PE     + +L  +C+   P QRP+F +I+  L+
Sbjct: 230 --KERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 46.3 bits (111), Expect = 3e-06
 Identities = 41/193 (21%), Positives = 80/193 (41%), Gaps = 42/193 (21%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL Q +   +K+ K                Q +    Q+ L L+++  ++++H+DI  +
Sbjct: 84  GDLSQKIKKQKKEGK-----------PFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQ 132

Query: 87  NCLISSDLSVKISLSGLSK---DTYQKE-------YYKYRNAILPLRWLPYEAVFDDEFS 136
           N  ++S+  VK+   G+SK    T           YY           L  E   +  ++
Sbjct: 133 NIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYY-----------LSPELCQNKPYN 181

Query: 137 TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPE-YITSLHE-- 193
            KSD+++  C+++E+    + PF    + + L +L + K+        P  Y + L    
Sbjct: 182 YKSDIWSLGCVLYELCT-LKHPF----EGENLLEL-ALKILKGQYPPIPSQYSSELRNLV 235

Query: 194 -KCIHPHPHQRPT 205
              +   P +RP+
Sbjct: 236 SSLLQKDPEERPS 248

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 46.2 bits (109), Expect = 4e-06
 Identities = 26/102 (25%), Positives = 55/102 (53%), Gaps = 3/102 (2%)

Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
           +AV  A ++  GLE +  +R++++D+   N L+     ++IS  GL+    + +  K R 
Sbjct: 103 RAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR- 161

Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
            +  + ++  E V ++ ++   D +A  CL++E+   G+ PF
Sbjct: 162 -VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI-AGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 45.5 bits (107), Expect = 8e-06
 Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)

Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL +I  + ++H+D+  +N LIS    +K++  GL++       + Y N ++ L 
Sbjct: 110 FQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLAR-AKSVPSHTYSNEVVTLW 168

Query: 124 WLPYEAVF-DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
           + P + +    E+ST  D++   C+  E+  +G   FP + D Q   QLE
Sbjct: 169 YRPPDVLLGSTEYSTCLDMWGVGCIFVEMI-QGVAAFPGMKDIQ--DQLE 215

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 45.3 bits (107), Expect = 8e-06
 Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 25/139 (17%)

Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK------DTYQKEYYKYRN 117
           +Q+  GL +I  + ++H+D+  +N LIS    +K++  GL++       TY  E      
Sbjct: 110 FQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSE------ 163

Query: 118 AILPLRWLPYEAVF-DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES--- 173
            ++ L + P + +    ++S+  D++   C+  E+  +G+  FP +SD  V  QLE    
Sbjct: 164 -VVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEML-QGQPAFPGVSD--VFEQLEKIWT 219

Query: 174 -----KKLCWKHSSKTPEY 187
                 +  W   SK P Y
Sbjct: 220 VLGVPTEDTWPGVSKLPNY 238

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 44.8 bits (106), Expect = 9e-06
 Identities = 25/99 (25%), Positives = 53/99 (53%), Gaps = 7/99 (7%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
           Q+ L L+H+ D++++H+DI ++N  ++ D ++K+   G+++          R  I    +
Sbjct: 109 QICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIAR-VLNSTVELARTCIGTPYY 167

Query: 125 LPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEM 157
           L  E   +  ++ KSD++A  C+++E+      F  G M
Sbjct: 168 LSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 1/45 (2%)

Query: 62  MAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKISLSGLSK 105
           +A Q+  GL+++ + + +IH+DI   N LI+S   VKI+  G+SK
Sbjct: 104 IARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISK 148

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 10/165 (6%)

Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
           SL    A     ++ L LE++    +IH+D+   N LI S+  +K++  GLSK    +  
Sbjct: 89  SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQ 148

Query: 113 YKYRNAILPLR-------WLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD 165
               +     +       ++  E +     S   D ++  C+++E F  G  PF   + +
Sbjct: 149 INLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYE-FLVGIPPFHGETPE 207

Query: 166 QVLSQLESKKLCWKHS-SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
           ++   + + K+ W      + E I  L  K + P P +R    SI
Sbjct: 208 EIFQNILNGKIEWPEDVEVSDEAI-DLISKLLVPDPEKRLGAKSI 251

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 25/188 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI-----SDKRLIH 80
            GDL Q +   +K+ K            +       +  Q+ L L            ++H
Sbjct: 85  GGDLAQLIQKCKKERK-----------YIEEEFIWRILTQLLLALYECHNRSDPGNTVLH 133

Query: 81  KDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSD 140
           +D+   N  + ++ +VK+   GL+K       +       P    P E +    +  KSD
Sbjct: 134 RDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSP-EQLNHMSYDEKSD 192

Query: 141 VYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL-CWKH--SSKTPEYITSLHEKCIH 197
           +++  CLI+E+      PF   +  Q+ S+++  K     +  SS+  E I S     ++
Sbjct: 193 IWSLGCLIYELC-ALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKS----MLN 247

Query: 198 PHPHQRPT 205
             P +RP+
Sbjct: 248 VDPDKRPS 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 3/110 (2%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
                ++A+  A Q+  GLEH+  +R++++D+   N L+    +V+IS  GL+ +    +
Sbjct: 90  PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK 149

Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD 161
             K R A  P    P E +  + +    D +A  C ++E+   G  PF  
Sbjct: 150 KIKGR-AGTPGYMAP-EVLQGEVYDFSVDWFALGCTLYEMI-AGRSPFRQ 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 35/165 (21%), Positives = 77/165 (46%), Gaps = 15/165 (9%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L  +Q V    Q+A+ L+++ +K ++H+D+  +N  ++    +K+   G+++   + +  
Sbjct: 99  LPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIAR-VLENQCD 157

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEMPFPDLSDDQV 167
                I    ++  E   +  ++ KSDV+A  C ++E+      FN  +M       + +
Sbjct: 158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-------NSL 210

Query: 168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ 212
           + ++   KL       +PE +  L    +   P +RP+  SI+ Q
Sbjct: 211 VYRIIEGKLPPMPKDYSPE-LGELIATMLSKRPEKRPSVKSILRQ 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 23/87 (26%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
           Q+ LG++HI +KR++H+DI ++N  ++ +  VK+   G ++       Y       P  +
Sbjct: 108 QMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPY-Y 166

Query: 125 LPYEAVFDDEFSTKSDVYAYACLIWEI 151
           +P E   +  ++ KSD+++  C+++E+
Sbjct: 167 VPPEIWENMPYNNKSDIWSLGCILYEL 193

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 107
           +   R L  +Q  +    +  G+ ++    ++H+D+   N LIS+D  +KI+  GL++  
Sbjct: 90  RDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLF 149

Query: 108 YQKEYYKYRNAILPLRWLPYEAVF-DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ 166
            ++E   Y + +    +   E ++   ++    D++A  C+  E+ N   + FP  +D  
Sbjct: 150 SEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPL-FPGEND-- 206

Query: 167 VLSQL 171
            + QL
Sbjct: 207 -IEQL 210

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 30/120 (25%), Positives = 62/120 (51%), Gaps = 5/120 (4%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
            + SQ      Q+  GL+++    ++H+DI   N LI++D  +K++  GL++   ++   
Sbjct: 97  FTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA 156

Query: 114 KYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
            Y N ++ L + P E +     +  + D+++  C++ E+F  G+  F   ++   L QLE
Sbjct: 157 DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFL-GKPIFQGSTE---LEQLE 212

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)

Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
             VR  +         QV  GL ++  K ++H+D+ A N L+ +D   KIS  G+SK + 
Sbjct: 108 QLVRFFTE--------QVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKS- 158

Query: 109 QKEYYKYRNAIL--PLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
              Y   +N  +   + W+  E +      +S K D+++  C++ E+F  G  P+ D   
Sbjct: 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMF-AGRRPWSDEEA 217

Query: 165 DQVLSQLESKK 175
              + +L +K+
Sbjct: 218 IAAMFKLGNKR 228

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 43.3 bits (102), Expect = 3e-05
 Identities = 38/180 (21%), Positives = 80/180 (44%), Gaps = 15/180 (8%)

Query: 40  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKI 98
           S DK  +G      +       + Y V  GL+ + ++  +IH+D+   N L++ +  VK+
Sbjct: 85  SLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKL 144

Query: 99  SLSGLSKD---TYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKG 155
              G+S +   +  K     ++ + P R        +  ++ +SDV++    I E+   G
Sbjct: 145 CDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEM-ALG 203

Query: 156 EMPFPDLSDDQVLSQLES------KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
             P+P  +   + +QL +        L   +S    +++     KC++  P++RPT+  +
Sbjct: 204 RYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVA----KCLNKIPNRRPTYAQL 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 19/168 (11%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
                 +   +Q+   + +I    ++H+DI   N  ++    +K+   G+SK     EY 
Sbjct: 98  FEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISK-ILGSEYS 156

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
                +    ++  E     +++ KSD++A  C+++E+          L+  +       
Sbjct: 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYEL----------LTLKRTFDATNP 206

Query: 174 KKLCWK--HSSKTPE---YITSLHE---KCIHPHPHQRPTFPSIVTQL 213
             L  K    + TP    Y + L       +   P +RPT   ++ Q 
Sbjct: 207 LNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 42.9 bits (102), Expect = 4e-05
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 15/109 (13%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           +  S S   ++ YQ+  GL HI      H+D+   N L+S    VKI+  GL+++   + 
Sbjct: 94  KPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153

Query: 112 YYK-------YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN 153
            Y        YR   + LR           +S+  D++A  C++ E++ 
Sbjct: 154 PYTDYVSTRWYRAPEILLR--------STSYSSPVDIWALGCIMAELYT 194

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 43.1 bits (101), Expect = 5e-05
 Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 3/153 (1%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L+  Q  T+   V   L ++  + +IH+DI + + L++ D  VK+S  G       K+  
Sbjct: 114 LNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI-SKDVP 172

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-E 172
           K ++ +    W+  E +    + T+ D+++   ++ E+ + GE P+   S  Q + +L +
Sbjct: 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVD-GEPPYFSDSPVQAMKRLRD 231

Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
           S     K++ K    +    E+ +   P +R T
Sbjct: 232 SPPPKLKNAHKISPVLRDFLERMLTREPQERAT 264

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 42.6 bits (101), Expect = 5e-05
 Identities = 27/113 (23%), Positives = 59/113 (52%), Gaps = 6/113 (5%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           ++L+  +   + YQ   GLE++   + IH+DI A N L++ +   K++  G+S      +
Sbjct: 94  KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVS--GQLTD 151

Query: 112 YYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL 162
               RN ++  P  W+  E + +  ++ K+D+++      E+  +G+ P+ D+
Sbjct: 152 TMAKRNTVIGTPF-WMAPEVIQEIGYNNKADIWSLGITAIEMA-EGKPPYSDI 202

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 14/115 (12%)

Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILP 121
           YQ+  GL++I    +IH+D+   N L++ D  ++I   G+++   +   E+  +    + 
Sbjct: 114 YQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVA 173

Query: 122 LRWLPYEA-----VFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
            RW  Y A         E++T  D+++  C+  E+  + ++ FP  +    + QL
Sbjct: 174 TRW--YRAPELLLSL-PEYTTAIDMWSVGCIFAEMLGRRQL-FPGKN---YVHQL 221

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)

Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG----LSKDTY 108
            ++  Q   +  +V  GLE++  + +IH+DI + N L+S D SVK++  G    L+K+  
Sbjct: 112 RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171

Query: 109 QKEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ 166
           +      RN+++  P  W+  E +   ++  K D+++   +  E+  +GE P+      +
Sbjct: 172 K------RNSVVGTPY-WMAPEVIKRKDYGPKVDIWSLGIMCIEMA-EGEPPYLREPPLR 223

Query: 167 VLSQLESK---KLCWKHSSK-TPEYITSLHEKCIHPHPHQRPT 205
            L  + +K    L  K+  K +PE+   L  KC+   P +RP+
Sbjct: 224 ALFLITTKGIPPL--KNPEKWSPEFKDFL-NKCLVKDPEKRPS 263

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 12/109 (11%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 107
           K R R L   +  +  YQ+   L+H+    + H+DI   N LI  D+ +K++  G  +  
Sbjct: 91  KGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDI-LKLADFGSCRGI 149

Query: 108 YQKE-YYKYRNAILPLRWLPYEA----VFDDEFSTKSDVYAYACLIWEI 151
           Y K  Y +Y    +  RW  Y A    + D  +  K D++A  C+ +EI
Sbjct: 150 YSKPPYTEY----ISTRW--YRAPECLLTDGYYGPKMDIWAVGCVFFEI 192

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 42.3 bits (99), Expect = 8e-05
 Identities = 23/102 (22%), Positives = 52/102 (50%), Gaps = 3/102 (2%)

Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
           +A+  A ++  GLE +  +  +++D+   N L+     ++IS  GL+    + E  + R 
Sbjct: 103 RALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR- 161

Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
            +  + ++  E + +  ++   D +   CLI+E+  +G+ PF
Sbjct: 162 -VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMI-EGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 22/97 (22%), Positives = 52/97 (53%), Gaps = 10/97 (10%)

Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--- 118
           M +Q+  GL+ +   R++H+D+  +N L++S   +K++  GL++       Y ++ A   
Sbjct: 115 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMALTS 168

Query: 119 -ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
            ++ L +   E +    ++T  D+++  C+  E+F +
Sbjct: 169 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 205

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 20/154 (12%)

Query: 61  TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS---LSGLSKDTYQKEYYKYRN 117
            +  +V LGLE++ ++  IH+DI A N L+S +  VK++   +SG    T  K     RN
Sbjct: 102 FILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK-----RN 156

Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL---SQLE 172
             +  P  W+  E +    +  K+D+++      E+  KGE P  DL   +VL    +  
Sbjct: 157 TFVGTPF-WMAPEVIKQSGYDEKADIWSLGITAIELA-KGEPPLSDLHPMRVLFLIPKNN 214

Query: 173 SKKLCWKHSSKT-PEYITSLHEKCIHPHPHQRPT 205
              L     SK   +++      C++  P +RP+
Sbjct: 215 PPSLEGNKFSKPFKDFV----SLCLNKDPKERPS 244

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 17/114 (14%)

Query: 69  GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS----------KDTYQKEYYKYRNA 118
           GL ++     IH++I A + LIS D  V  SLSGLS          K     ++ ++  +
Sbjct: 113 GLNYLHQNGYIHRNIKASHILISGDGLV--SLSGLSHLYSLVRNGQKAKVVYDFPQFSTS 170

Query: 119 ILPLRWLPYEAVFDD--EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
           +LP  WL  E +  D   ++ KSD+Y+      E+   G +PF D+   Q+L Q
Sbjct: 171 VLP--WLSPELLRQDLYGYNVKSDIYSVGITACELAT-GRVPFQDMLRTQMLLQ 221

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 24/102 (23%), Positives = 55/102 (53%), Gaps = 3/102 (2%)

Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
           +A+  A ++  GLE +  +R++++D+   N L+     ++IS  GL+    + E    R 
Sbjct: 103 RAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE--TVRG 160

Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
            +  + ++  E + +++++   D +   CLI+E+  +G+ PF
Sbjct: 161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMI-QGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 26/169 (15%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS---LSGLSKDTY 108
           R L+  Q   +  Q+   L  +   ++IH+D+ A N L++ D  VK++   +S  +K T 
Sbjct: 98  RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157

Query: 109 QKEYYKYRNA-ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEMPFPD 161
           QK     R+  I    W+  E V  + F  K + Y Y   IW +        + E P  +
Sbjct: 158 QK-----RDTFIGTPYWMAPEVVACETF--KDNPYDYKADIWSLGITLIELAQMEPPHHE 210

Query: 162 LSDDQVLSQL---ESKKLCWKH--SSKTPEYITSLHEKCIHPHPHQRPT 205
           L+  +VL ++   E   L      SS   +++      C+   P  RPT
Sbjct: 211 LNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLK----SCLVKDPDDRPT 255

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 20/123 (16%)

Query: 38  KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 97
           +D   K    K   ++LS +Q      Q+ LG+ ++  +R++H+D+ A+N  + ++L +K
Sbjct: 87  RDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNL-LK 145

Query: 98  ISLSGLSK---------DTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLI 148
           I   G+S+          T+    Y          ++  EA+    + +KSD+++  C++
Sbjct: 146 IGDFGVSRLLMGSCDLATTFTGTPY----------YMSPEALKHQGYDSKSDIWSLGCIL 195

Query: 149 WEI 151
           +E+
Sbjct: 196 YEM 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 30/188 (15%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+Q       + K ++ + +         +A  +  QV L + H+  K +IH+DI + 
Sbjct: 124 GDLRQ-------EIKSRAKTNRT----FREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSA 172

Query: 87  NCLISSDLSVKISLSGLSK-------DTYQKEYYKYRNAILPLRW--LPYEAVFDDEFST 137
           N L+ S+  VK+   G SK       D   + +      + P  W   PY        S 
Sbjct: 173 NILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPY--------SK 224

Query: 138 KSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIH 197
           K+D+++   L++E+    + PF   + ++V+ +  + +      S +PE +  +    + 
Sbjct: 225 KADMFSLGVLLYELLTL-KRPFDGENMEEVMHKTLAGRYDPLPPSISPE-MQEIVTALLS 282

Query: 198 PHPHQRPT 205
             P +RP+
Sbjct: 283 SDPKRRPS 290

Length = 496

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 14/118 (11%)

Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P V+ L+ SQ      Q+  G+ ++ +  ++H+DI A N LI +   +KI+  GL++   
Sbjct: 108 PSVK-LTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD 166

Query: 109 QKEY----------YKYRNAILPLRWL-PYEAVFDD-EFSTKSDVYAYACLIWEIFNK 154
                          KY N ++  RW  P E +  +  ++T  D++   C+  E+F +
Sbjct: 167 GPPPNPKGGGGGGTRKYTNLVVT-RWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTR 223

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 40.4 bits (94), Expect = 3e-04
 Identities = 25/106 (23%), Positives = 55/106 (51%), Gaps = 2/106 (1%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           ++  Q  T+   V   L ++ ++ +IH+DI + + L++SD  +K+S  G       KE  
Sbjct: 115 MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV-SKEVP 173

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
           K ++ +    W+  E +    + T+ D+++   ++ E+ + GE P+
Sbjct: 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID-GEPPY 218

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 9/113 (7%)

Query: 66  VALGLEHISDKRLIHKDIAARNCLISSDLSVKIS-----LSGLSKDTYQKEYYKY-RNAI 119
           V   L++I  K  IH+ + A + L+S D  V +S     +S +     Q+  + + ++++
Sbjct: 110 VLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSV 169

Query: 120 LPLRWLPYEAVFDD--EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
             L WL  E +  +   ++ KSD+Y+      E+ N G +PF D+   Q+L +
Sbjct: 170 KNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELAN-GHVPFKDMPATQMLLE 221

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 11/148 (7%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
           Q+  GL+ + +++++H+D+ + N L+ ++  VKI   G+SK    K+         P  +
Sbjct: 111 QLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISK--VLKKNMAKTQIGTPH-Y 167

Query: 125 LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKT 184
           +  E      +S KSD+++  CL++E+      PF    + + +  L  K    K+    
Sbjct: 168 MAPEVWKGRPYSYKSDIWSLGCLLYEMA-TFAPPF----EARSMQDLRYKVQRGKYPPIP 222

Query: 185 PEY---ITSLHEKCIHPHPHQRPTFPSI 209
           P Y   + +     +   P  RP    I
Sbjct: 223 PIYSQDLQNFIRSMLQVKPKLRPNCDKI 250

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 10/107 (9%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP--- 121
           Q   GL+ +    ++H+D+   N L++S   VK++  GL++       Y  + A+ P   
Sbjct: 116 QFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLAR------IYSCQMALTPVVV 169

Query: 122 -LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
            L +   E +    ++T  D+++  C+  E+F +  +   +   DQ+
Sbjct: 170 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL 216

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 40.0 bits (93), Expect = 5e-04
 Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 3/98 (3%)

Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           YQ+  GL +   ++++H+D+  +N LI+    +K++  GL++         Y N ++ L 
Sbjct: 111 YQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLAR-AKSVPTKTYSNEVVTLW 169

Query: 124 WLPYEAVF-DDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
           + P + +    E+ST+ D++   C+ +E+   G   FP
Sbjct: 170 YRPPDVLLGSSEYSTQIDMWGVGCIFFEM-ASGRPLFP 206

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 40.0 bits (93), Expect = 5e-04
 Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 7/104 (6%)

Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           Y   LGL+H+ + R+IH+D+   N L++++  VK+   G+S         +  +   P  
Sbjct: 135 YGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPF- 193

Query: 124 WLPYEAV-----FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL 162
           W+  E +     +D  +  + DV++      E+   G+ P  D+
Sbjct: 194 WMAPEVIACEQQYDYSYDARCDVWSLGITAIEL-GDGDPPLFDM 236

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
               +A     Q+  GLEH+  +R+I++D+   N L+ +D +V+IS  GL+ +    +  
Sbjct: 94  FPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK 153

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI 151
               A  P    P E +  +E+    D +A    ++E+
Sbjct: 154 TKGYAGTPGFMAP-ELLQGEEYDFSVDYFALGVTLYEM 190

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 14/111 (12%)

Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILP 121
           +Q+  G+E      +IH+DI   N L+S    VK+   G ++      + Y  Y    + 
Sbjct: 107 FQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY----VA 162

Query: 122 LRWLPYEA----VFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQV 167
            RW  Y A    V D ++    D++A  CL+ E+   GE  FP  SD DQ+
Sbjct: 163 TRW--YRAPELLVGDTKYGRAVDIWAVGCLVTEMLT-GEPLFPGDSDIDQL 210

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 34/161 (21%), Positives = 69/161 (42%), Gaps = 20/161 (12%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           Q+ L L H+  K ++H+D+  +N L+    + VKI   G+SK    K   K    +    
Sbjct: 109 QILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS--KAYTVVGTPC 166

Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEMPFPDLSDDQVLSQLESKKLC 177
           ++  E      ++ KSD++A  C+++E+      F    +P        ++ ++ S    
Sbjct: 167 YISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-------ALVLKIMSGTFA 219

Query: 178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC 218
                 +P+ +  L    ++  P +RP    I   ++  +C
Sbjct: 220 PISDRYSPD-LRQLILSMLNLDPSKRPQLSQI---MAQPIC 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 14/126 (11%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-- 105
           K R R L  S   +  YQ+  GL       ++H+D+   N LI+++  +K++  GL++  
Sbjct: 89  KDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSF 148

Query: 106 DTYQKEYYKYRNAILPLRWLPYEA----VFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD 161
            +  + Y  Y    +  RW  Y A    + D  +ST  D+++  C+  E+ +     FP 
Sbjct: 149 GSPVRPYTHY----VVTRW--YRAPELLLGDKGYSTPVDIWSVGCIFAELLS-RRPLFPG 201

Query: 162 LSD-DQ 166
            S+ DQ
Sbjct: 202 KSEIDQ 207

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 14/114 (12%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQ 109
           R L         YQ+  GL+++    ++H+D+   N LI+ +  +KI   GL++  D   
Sbjct: 103 RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQM 162

Query: 110 KEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
             Y     YR   + L W  Y+         + D+++  C+  E+   G+  FP
Sbjct: 163 TGYVSTRYYRAPEIMLTWQKYD--------VEVDIWSAGCIFAEMLE-GKPLFP 207

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 7/145 (4%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
           ++  GL H+   ++IH+DI  +N L++ +  VK+   G+S     +   +    I    W
Sbjct: 119 EILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ-LDRTVGRRNTFIGTPYW 177

Query: 125 LPYEAVFDDE-----FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
           +  E +  DE     +  KSD+++      E+  +G  P  D+   + L  +        
Sbjct: 178 MAPEVIACDENPDATYDFKSDLWSLGITAIEM-AEGAPPLCDMHPMRALFLIPRNPAPRL 236

Query: 180 HSSKTPEYITSLHEKCIHPHPHQRP 204
            S K  +   S  E C+  +  QRP
Sbjct: 237 KSKKWSKKFQSFIESCLVKNHSQRP 261

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 38.6 bits (91), Expect = 0.001
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 14/78 (17%)

Query: 28  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 87
           DLK++L                R   LS +   ++ YQ+  GL +    R++H+D+  +N
Sbjct: 83  DLKKYL--------------DKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQN 128

Query: 88  CLISSDLSVKISLSGLSK 105
            LI+ D  +K++  GL++
Sbjct: 129 ILINRDGVLKLADFGLAR 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 8/116 (6%)

Query: 55  STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 114
           S  +AV  A  V LGL+++ + +++++D+   N L+ ++  VKI+  GL K+      + 
Sbjct: 99  SEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM---GFG 155

Query: 115 YRNAIL---PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
            R +     P  +L  E + +  ++   D +    LI+E+   GE PFP   +++V
Sbjct: 156 DRTSTFCGTP-EFLAPEVLTETSYTRAVDWWGLGVLIYEML-VGESPFPGDDEEEV 209

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 25/162 (15%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-- 107
           + + LS      + YQ+  GL++I    +IH+D+   N  ++ D  ++I   GL++    
Sbjct: 111 KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD 170

Query: 108 ----YQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS 163
               Y    + YR   + L W+ Y            D+++  C++ E+  KG+  FP   
Sbjct: 171 EMTGYVATRW-YRAPEIMLNWMHYNQTV--------DIWSVGCIMAELL-KGKALFP--- 217

Query: 164 DDQVLSQLESKKLCWKHSSKTPEY---ITSLH-EKCIHPHPH 201
            +  + QL  K++     + +PE    I+S H  K I   PH
Sbjct: 218 GNDYIDQL--KRIMEVVGTPSPEVLKKISSEHARKYIQSLPH 257

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)

Query: 28  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 87
           DLKQ++        D  G G      LS        +Q+  GL +   +R++H+D+  +N
Sbjct: 88  DLKQYM--------DDCGGG------LSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQN 133

Query: 88  CLISSDLSVKISLSGL--SKDTYQKEYYKYRNAILPLRWLPYEAVF-DDEFSTKSDVYAY 144
            LIS    +K++  GL  +K    K    Y N ++ L + P + +    E+ST  D++  
Sbjct: 134 LLISERGELKLADFGLARAKSVPSK---TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGV 190

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
            C+ +E+   G   FP  +D  V  QL 
Sbjct: 191 GCIFYEMAT-GRPLFPGSTD--VEDQLH 215

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 8/160 (5%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R L+  Q   +  Q+   L+++   ++IH+D+ A N L++ D  +K++  G+S     K 
Sbjct: 105 RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNV-KT 163

Query: 112 YYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ 166
             +  + I    W+  E V      D  +  K+D+++    + E+  + E P  +L+  +
Sbjct: 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM-AQIEPPHHELNPMR 222

Query: 167 VLSQL-ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
           VL ++ +S+       SK         +  +  HP  RP+
Sbjct: 223 VLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPS 262

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 17/134 (12%)

Query: 28  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 87
           DLKQ+L        D  G+       +S        +Q+  GL +   ++++H+D+  +N
Sbjct: 88  DLKQYL--------DNCGN------LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQN 133

Query: 88  CLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-DDEFSTKSDVYAYAC 146
            LI+    +K++  GL++         Y N ++ L + P + +    E+ST  D++   C
Sbjct: 134 LLINEKGELKLADFGLAR-AKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGC 192

Query: 147 LIWEIFNKGEMPFP 160
           +++E+     M FP
Sbjct: 193 ILYEMATGRPM-FP 205

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 21/161 (13%)

Query: 17  KSGSGKPRV-------KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALG 69
           +  +GKP +         DLK+F+ +  +      G G+P    L      +  YQ+  G
Sbjct: 73  EEKNGKPSLYLVFEYLDSDLKKFMDSNGR------GPGRP----LPAKTIKSFMYQLLKG 122

Query: 70  LEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPLRWLPYE 128
           + H     ++H+D+  +N L+     + KI+  GL +  +      Y + I+ L +   E
Sbjct: 123 VAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR-AFSIPVKSYTHEIVTLWYRAPE 181

Query: 129 AVF-DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
            +     +ST  D+++  C+  E+  K  + FP  S+ Q L
Sbjct: 182 VLLGSTHYSTPVDIWSVGCIFAEMSRKQPL-FPGDSELQQL 221

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 29/159 (18%), Positives = 66/159 (41%), Gaps = 14/159 (8%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 105
           R       +A   A ++ LGL+ + ++ +I++D+   N L+ S+  +KI+  G+ K    
Sbjct: 89  RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL 148

Query: 106 -DTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
                  +    + I P      E +    +    D +A   L++E+   G+ PF    +
Sbjct: 149 GGVTTSTFCGTPDYIAP------EILSYQPYGPAVDWWALGVLLYEML-AGQSPFEGDDE 201

Query: 165 DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
           D++   +   ++ +           S+ +  +  +P +R
Sbjct: 202 DELFQSILEDEVRYPRWLSKEA--KSILKSFLTKNPEKR 238

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 5/112 (4%)

Query: 45  GSGKPRVRS---LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 101
           GS K ++++   L+ +       Q+  G+E++    ++H+DI   N L  S  +VK+   
Sbjct: 89  GSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDF 148

Query: 102 GLSK--DTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI 151
           G SK   T        ++      W+  E +  + +  K+DV++  C + E+
Sbjct: 149 GASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEM 200

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 19/150 (12%)

Query: 69  GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--KEYYKYRNAIL--PLRW 124
           GLE++     IH+DI A N L+  D SVKI+  G+S           K R   +  P  W
Sbjct: 114 GLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPC-W 172

Query: 125 LPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL--------SQLESKK 175
           +  E +     +  K+D++++     E+   G  P+      +VL          LE+  
Sbjct: 173 MAPEVMEQVHGYDFKADIWSFGITAIELAT-GAAPYSKYPPMKVLMLTLQNDPPSLETGA 231

Query: 176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
              K+S    + I      C+   P +RPT
Sbjct: 232 DYKKYSKSFRKMI----SLCLQKDPSKRPT 257

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 33/153 (21%), Positives = 72/153 (47%), Gaps = 3/153 (1%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           ++  Q  T+   V   L  +  + +IH+DI + + L++SD  VK+S  G       KE  
Sbjct: 112 MNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQV-SKEVP 170

Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-E 172
           + ++ +    W+  E +    + T+ D+++   ++ E+ + GE P+ +    Q + ++ +
Sbjct: 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVD-GEPPYFNEPPLQAMKRIRD 229

Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
           +     K+  K    + S  ++ +   P QR T
Sbjct: 230 NLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRAT 262

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 14/116 (12%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++ T  
Sbjct: 113 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 172

Query: 110 K-----EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
           +         YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 173 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 219

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 13/109 (11%)

Query: 70  LEHISDKRLIHKDIAARNCLISSDLSVKIS-----LSGLSKDTYQK---EYYKYRNAILP 121
           L++I     +H+ + A + LIS D  V +S     LS ++     +   ++ KY   +LP
Sbjct: 114 LDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLP 173

Query: 122 LRWLPYEAVFDD--EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             WL  E +  +   +  KSD+Y+      E+ N G +PF D+   Q+L
Sbjct: 174 --WLSPEVLQQNLQGYDAKSDIYSVGITACELAN-GHVPFKDMPATQML 219

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 27/132 (20%), Positives = 62/132 (46%), Gaps = 2/132 (1%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           +V      QAV  A ++++GL  +  + +I++D+   N ++ S+  +KI+  G+ K+ + 
Sbjct: 94  QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-HM 152

Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            +    R       ++  E +    +    D +AY  L++E+   G+ PF    +D++  
Sbjct: 153 VDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML-AGQPPFDGEDEDELFQ 211

Query: 170 QLESKKLCWKHS 181
            +    + +  S
Sbjct: 212 SIMEHNVSYPKS 223

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 3/98 (3%)

Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL +   ++++H+D+  +N LI+    +K++  GL++         Y N ++ L 
Sbjct: 111 FQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYSNEVVTLW 169

Query: 124 WLPYEAVF-DDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
           + P + +    ++ST+ D++   C+ +E+ + G   FP
Sbjct: 170 YRPPDILLGSTDYSTQIDMWGVGCIFYEM-STGRPLFP 206

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 23/115 (20%)

Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI-------SLSGLSKDTYQKEYYKYR 116
           +Q+   + +     +IH+DI   N L+S    +K+       +L      +   +Y    
Sbjct: 107 WQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRA-RPASPLTDY---- 161

Query: 117 NAILPLRWLPYEA----VFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQ 166
              +  RW  Y A    V D  +    DV+A  C++ E+ + GE  FP  SD DQ
Sbjct: 162 ---VATRW--YRAPELLVGDTNYGKPVDVWAIGCIMAELLD-GEPLFPGDSDIDQ 210

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 32/151 (21%), Positives = 69/151 (45%), Gaps = 26/151 (17%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK------ 105
            +L  +   +  YQ+  G+    + R++H+D+  +N LI+    +K++  GL++      
Sbjct: 95  GALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154

Query: 106 DTYQKE----YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD 161
           +T+  E    +Y+  + +L  R           +ST  D+++  C++ E+   G   FP 
Sbjct: 155 NTFSNEVVTLWYRAPDVLLGSR----------TYSTSIDIWSVGCIMAEMIT-GRPLFPG 203

Query: 162 LSDDQVLSQL-----ESKKLCWKHSSKTPEY 187
            +++  L ++        +  W   S+ PEY
Sbjct: 204 TNNEDQLLKIFRIMGTPTESTWPGISQLPEY 234

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 35/161 (21%)

Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+  G++H+    +IH+D+   N ++ SD ++KI   GL+           R A   
Sbjct: 128 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTACTN 176

Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF--PDLSD--DQVL 168
               PY         E +    +    D+++  C++ E+  KG + F   D  D  ++V+
Sbjct: 177 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV-KGSVIFQGTDHIDQWNKVI 235

Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
            QL +            E++  L    +  +   RP +P I
Sbjct: 236 EQLGTPSA---------EFMNRLQPT-VRNYVENRPQYPGI 266

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	223
KOG0197|consensus	468		100.0
KOG0192|consensus	362		100.0
KOG0581|consensus	364		100.0
KOG1026|consensus	774		100.0
KOG0591|consensus	375		100.0
KOG0578|consensus	550		100.0
KOG0575|consensus	592		100.0
KOG1095|consensus	1025		100.0
KOG0198|consensus	313		100.0
KOG0592|consensus	604		100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0615|consensus	475		100.0
KOG4278|consensus	1157		100.0
KOG0598|consensus	357		100.0
KOG0583|consensus	370		100.0
KOG0595|consensus	429		100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG0616|consensus	355		100.0
KOG4721|consensus	904		100.0
KOG0661|consensus	538		100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
KOG0193|consensus	678		100.0
KOG0582|consensus	516		100.0
KOG0589|consensus	426		100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
KOG0604|consensus	400		100.0
KOG0593|consensus	396		100.0
KOG0588|consensus	786		100.0
KOG0200|consensus	609		100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0599|consensus	411		100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
KOG4257|consensus	974		100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
KOG0196|consensus	996		100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
KOG0610|consensus	459		100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
KOG0201|consensus	467		100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
KOG0194|consensus	474		100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
KOG0611|consensus	668		100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
KOG0033|consensus	355		100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
KOG0597|consensus	808		100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
KOG0605|consensus	550		100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
KOG1024|consensus	563		100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
KOG0199|consensus	1039		100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
KOG0585|consensus	576		100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
KOG1989|consensus	738		100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
KOG2345|consensus	302		100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
KOG1187|consensus	361		100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
KOG0600|consensus	560		100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.98
KOG0580|consensus	281		99.98
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.98
KOG0660|consensus	359		99.98
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.98
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.98
PTZ00036	440	glycogen synthase kinase; Provisional	99.98
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.98
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.98
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.98
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.98
KOG0694|consensus	694		99.98
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.98
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.98
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.98
KOG0659|consensus	318		99.98
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.98
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.98
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.98
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.98
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.98
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.98
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.98
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.97
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.97
PTZ00284	467	protein kinase; Provisional	99.97
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.97
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.97
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.97
KOG1025|consensus	1177		99.97
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.97
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.97
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.97
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.97
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.97
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.97
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.97
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.97
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.97
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.97
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.97
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.97
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.97
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.97
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.97
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.97
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.97
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.97
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
KOG0663|consensus	419		99.97
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.97
PHA03212	391	serine/threonine kinase US3; Provisional	99.97
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.97
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.97
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.97
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.97
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.97
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.97
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.97
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.97
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.97
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.97
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.97
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
KOG0032|consensus	382		99.97
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.97
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.97
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.97
KOG1094|consensus	807		99.97
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.97
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.97
KOG4645|consensus	1509		99.97
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.97
KOG0667|consensus	586		99.97
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.97
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.97
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.97
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.97
PHA03209	357	serine/threonine kinase US3; Provisional	99.97
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.97
KOG0579|consensus	1187		99.97
KOG0690|consensus	516		99.97
KOG0658|consensus	364		99.97
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.97
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.97
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.97
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.97
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.97
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.97
KOG4279|consensus	1226		99.97
KOG4717|consensus	864		99.97
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.97
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.97
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.97
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.97
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.97
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.97
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.97
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.97
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.97
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.97
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.97
KOG0594|consensus	323		99.97
PHA02882	294	putative serine/threonine kinase; Provisional	99.97
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.97
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.97
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.97
KOG0603|consensus	612		99.97
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.97
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.97
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.97
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.97
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.97
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.97
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.97
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.97
KOG0614|consensus	732		99.97
PHA03211	461	serine/threonine kinase US3; Provisional	99.97
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.97
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.97
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.97
KOG0574|consensus	502		99.97
KOG0612|consensus	1317		99.97
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.97
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.97
KOG0577|consensus	948		99.97
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.97
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.97
KOG0983|consensus	391		99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.96
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.96
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.96
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.96
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.96
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.96
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.96
KOG0986|consensus	591		99.96
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.96
KOG0596|consensus	677		99.96
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.96
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.96
KOG0584|consensus	632		99.96
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.96
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.96
KOG1035|consensus	1351		99.96
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.96
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.96
KOG0696|consensus	683		99.96
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.96
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.96
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.96
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.96
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.96
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.96
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.96
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.96
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.96
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.96
KOG0669|consensus	376		99.96
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.96
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.96
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.96
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.96
PLN00181	793	protein SPA1-RELATED; Provisional	99.96
PHA03210	501	serine/threonine kinase US3; Provisional	99.96
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.96
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.96
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.96
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.96
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.96
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.96
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.96
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.96
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.95
PLN00009	294	cyclin-dependent kinase A; Provisional	99.95
KOG0586|consensus	596		99.95
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.95
KOG0666|consensus	438		99.95
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.95
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.95
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.95
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.95
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.95
KOG4250|consensus	732		99.95
KOG2052|consensus	513		99.95
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.95
KOG0671|consensus	415		99.95
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.95
KOG0587|consensus	953		99.94
KOG0607|consensus	463		99.94
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.94
KOG0668|consensus	338		99.94
KOG3653|consensus	534		99.94
KOG1151|consensus	775		99.94
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.93
KOG0664|consensus	449		99.93
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.93
KOG0665|consensus	369		99.93
KOG0695|consensus	593		99.93
KOG4236|consensus	888		99.92
KOG1027|consensus	903		99.92
KOG1006|consensus	361		99.92
KOG0608|consensus	1034		99.92
KOG0662|consensus	292		99.92
KOG0984|consensus	282		99.91
KOG1345|consensus	378		99.9
KOG0670|consensus	752		99.9
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.89
KOG0576|consensus	829		99.87
KOG0590|consensus	601		99.86
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.84
KOG1152|consensus	772		99.83
KOG1023|consensus	484		99.83
KOG1164|consensus	322		99.83
KOG1167|consensus	418		99.83
KOG0195|consensus	448		99.82
KOG1290|consensus	590		99.81
KOG1165|consensus	449		99.77
KOG1033|consensus	516		99.77
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.76
KOG1240|consensus	1431		99.76
KOG1163|consensus	341		99.73
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.73
KOG4158|consensus	598		99.73
KOG0603|consensus	612		99.71
KOG0606|consensus	1205		99.69
KOG1166|consensus	974		99.64
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.51
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.48
PRK09188	365	serine/threonine protein kinase; Provisional	99.47
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.45
PRK12274	218	serine/threonine protein kinase; Provisional	99.43
KOG1266|consensus	458		99.39
KOG0590|consensus	601		99.33
smart00090	237	RIO RIO-like kinase.	99.26
KOG0606|consensus	1205		99.18
PRK10345	210	hypothetical protein; Provisional	99.17
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.17
PRK14879	211	serine/threonine protein kinase; Provisional	99.14
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.11
COG4248	637	Uncharacterized protein with protein kinase and he	99.05
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.05
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.02
KOG2137|consensus	700		98.96
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.94
KOG0601|consensus	524		98.91
KOG0601|consensus	524		98.8
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.76
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.71
KOG3087|consensus	229		98.66
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.66
KOG3741|consensus	655		98.65
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.61
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.6
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.5
KOG1243|consensus	690		98.4
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.29
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.26
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.18
PRK09902	216	hypothetical protein; Provisional	98.15
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.1
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.83
KOG1035|consensus	1351		97.5
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.47
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.87
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.84
KOG1235|consensus	538		96.51
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.43
KOG1826|consensus	2724		96.07
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	95.82
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	94.88
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	94.65
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	94.64
PRK05231	319	homoserine kinase; Provisional	94.17
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	94.17
PF01636	239	APH: Phosphotransferase enzyme family This family	94.05
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	93.97
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	93.97
KOG2268|consensus	465		93.88
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	93.82
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	93.38
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	93.17
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	92.88
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	92.73
KOG0576|consensus	829		92.62
PRK10271	188	thiK thiamine kinase; Provisional	92.42
PLN02236	344	choline kinase	91.98
KOG1093|consensus	725		91.88
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	91.73
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	91.63
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	91.09
COG2334	331	Putative homoserine kinase type II (protein kinase	91.0
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	90.94
PRK12396	409	5-methylribose kinase; Reviewed	89.96
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	89.95
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	89.03
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	88.73
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	88.32
PRK09550	401	mtnK methylthioribose kinase; Reviewed	87.35
PRK11768	325	serine/threonine protein kinase; Provisional	87.02
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	86.75
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	85.25
PRK06148	1013	hypothetical protein; Provisional	85.16
PHA03111	444	Ser/Thr kinase; Provisional	84.61
PRK06149	972	hypothetical protein; Provisional	83.93
PLN02756	418	S-methyl-5-thioribose kinase	81.63
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	80.31

>KOG0197|consensus

Probab=100.00  E-value=9.3e-45  Score=288.73  Aligned_cols=190  Identities=33%  Similarity=0.545  Sum_probs=177.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .-+|+||+..|+|.++|+...+             +.++..+.+.++.||++|++||++++++||||.++|||++.+..+
T Consensus       276 iyIVtE~m~~GsLl~yLr~~~~-------------~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~v  342 (468)
T KOG0197|consen  276 IYIVTEYMPKGSLLDYLRTREG-------------GLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVV  342 (468)
T ss_pred             eEEEEEecccCcHHHHhhhcCC-------------CccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceE
Confidence            4589999999999999997433             579999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++...+..+........|+.|.|||++....++.++|||||||++||++|.|+.||.++...++++.+.++ +
T Consensus       343 KIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G-y  421 (468)
T KOG0197|consen  343 KISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG-Y  421 (468)
T ss_pred             EEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc-C
Confidence            999999999666666666777788999999999999999999999999999999999999999999999999999998 8


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      +++.|..||++++++|..||+.+|++||||+.+...|.++...+
T Consensus       422 Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~  465 (468)
T KOG0197|consen  422 RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST  465 (468)
T ss_pred             cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence            89999999999999999999999999999999999999887654

>KOG0192|consensus

Probab=100.00  E-value=1.3e-41  Score=269.90  Aligned_cols=203  Identities=28%  Similarity=0.457  Sum_probs=176.7

Q ss_pred             chHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-ccc
Q psy15108          2 DLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR-LIH   80 (223)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H   80 (223)
                      |+++|+.++.+......+||||+++|+|.++++....             ..++...++.++.+|++|+.|||+++ |+|
T Consensus       100 NIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~-------------~~l~~~~~l~~aldiArGm~YLH~~~~iIH  166 (362)
T KOG0192|consen  100 NIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRK-------------RKLPLKVRLRIALDIARGMEYLHSEGPIIH  166 (362)
T ss_pred             CeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhccc-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCeee
Confidence            4555666666655567899999999999999987411             47999999999999999999999999 999


Q ss_pred             CCCCCCCeeeecCC-CeEEcCCCCCcccchhhhhhhhcCCcccccccccccc--cCCCCcccchHHHHHHHHHHHhCCCC
Q psy15108         81 KDIAARNCLISSDL-SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF--DDEFSTKSDVYAYACLIWEIFNKGEM  157 (223)
Q Consensus        81 ~di~~~nil~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~Di~slG~il~~l~~~~~~  157 (223)
                      ||+|+.|||++..+ ++||+|||+++...... .......||..|+|||++.  ...|+.++||||||+++|||+ ++..
T Consensus       167 rDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~-t~~~  244 (362)
T KOG0192|consen  167 RDLKSDNILVDLKGKTLKIADFGLSREKVISK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELL-TGEI  244 (362)
T ss_pred             cccChhhEEEcCCCCEEEECCCccceeecccc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHH-HCCC
Confidence            99999999999997 99999999997654432 1223367889999999999  568999999999999999999 7999


Q ss_pred             CCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        158 PFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       158 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ||.+....+....+.....++..+..+++.+..+|..||..||..||++.+++..|+.+...
T Consensus       245 Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~  306 (362)
T KOG0192|consen  245 PFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH  306 (362)
T ss_pred             CCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence            99999998888888777788888888999999999999999999999999999999987654

>KOG0581|consensus

Probab=100.00  E-value=2.6e-41  Score=258.55  Aligned_cols=176  Identities=20%  Similarity=0.273  Sum_probs=157.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~   95 (223)
                      ..++||||.+|||.++++..++               ++|..+-+++.++++||.|||+ .+|+||||||+|||++..|.
T Consensus       153 isI~mEYMDgGSLd~~~k~~g~---------------i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGe  217 (364)
T KOG0581|consen  153 ISICMEYMDGGSLDDILKRVGR---------------IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGE  217 (364)
T ss_pred             EEeehhhcCCCCHHHHHhhcCC---------------CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCC
Confidence            5588999999999999997654               9999999999999999999995 89999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHH
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL-----SDDQVLSQ  170 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~-----~~~~~~~~  170 (223)
                      +|++|||.+......   .-++..||..||+||-+.+..|+.++||||||+.++|++ .|+.||...     +..+.+..
T Consensus       218 VKicDFGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a-~GrfP~~~~~~~~~~~~~Ll~~  293 (364)
T KOG0581|consen  218 VKICDFGVSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELA-IGRFPYPPPNPPYLDIFELLCA  293 (364)
T ss_pred             EEeccccccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHh-hCCCCCCCcCCCCCCHHHHHHH
Confidence            999999998765444   346789999999999999999999999999999999999 899999764     56778888


Q ss_pred             HHhCcccCCCCCC-ChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        171 LESKKLCWKHSSK-TPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       171 ~~~~~~~~~~~~~-~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      |..+ ..+..+.. +++++++|+..||++||.+||+++|+++|
T Consensus       294 Iv~~-ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  294 IVDE-PPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             HhcC-CCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            8886 44444554 99999999999999999999999999977

>KOG1026|consensus

Probab=100.00  E-value=8.6e-42  Score=284.36  Aligned_cols=199  Identities=36%  Similarity=0.652  Sum_probs=181.0

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|+||+..|||.+||+.+.+...-..+ +.+..++++..+.+.|+.||+.|+.||-++.++|||+.++|+|+..+..|||
T Consensus       566 MvFEYm~~GDL~eFLra~sP~a~~~~~-g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKI  644 (774)
T KOG1026|consen  566 MVFEYMDHGDLHEFLRARSPKADKLAS-GQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKI  644 (774)
T ss_pred             EEEEecccccHHHHHHhhCCccccccC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEe
Confidence            789999999999999988764333222 2223678999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhh-cCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         99 SLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~-~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      +|||+++...+.+++..+ ....+++|||||.+.+.+++.++||||+||++||++++|..||.+..+.++++.+.++.. 
T Consensus       645 sDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-  723 (774)
T KOG1026|consen  645 SDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-  723 (774)
T ss_pred             cccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc-
Confidence            999999998888877655 678899999999999999999999999999999999999999999999999999999966 


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ++.+..||.++++||..||+.+|++||+|+||...|+.....
T Consensus       724 L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  724 LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence            889999999999999999999999999999999999887543

>KOG0591|consensus

Probab=100.00  E-value=1.4e-39  Score=241.12  Aligned_cols=198  Identities=19%  Similarity=0.249  Sum_probs=165.9

Q ss_pred             HHHHHhh----cCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc--CC-
Q psy15108          5 QFLLATR----KDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD--KR-   77 (223)
Q Consensus         5 ~~~~~~~----~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~-   77 (223)
                      |++..+.    ++.+...+|||+|.+|+|.++|+.-+.           ....+++..+++++.|++.||..+|.  .+ 
T Consensus        79 NIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~-----------qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~  147 (375)
T KOG0591|consen   79 NIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKK-----------QKRLIPEKTVWKYFVQLCRALYHCHSKIPRG  147 (375)
T ss_pred             hHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHh-----------ccccCchHHHHHHHHHHHHHHHHHhcccccc
Confidence            4555555    234446699999999999999997765           45679999999999999999999999  44 


Q ss_pred             -cccCCCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCC
Q psy15108         78 -LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGE  156 (223)
Q Consensus        78 -i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~  156 (223)
                       ++||||||.||+++.+|.+|++|||+++...+... .....+||+.|++||.+...+|+.++||||+||++|||+ .-+
T Consensus       148 ~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~t-fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMc-aL~  225 (375)
T KOG0591|consen  148 TVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTT-FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMC-ALQ  225 (375)
T ss_pred             ceeeccCcchheEEcCCCceeeccchhHhHhcchhH-HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHH-hcC
Confidence             89999999999999999999999999986554432 234578999999999999999999999999999999999 688


Q ss_pred             CCCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        157 MPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       157 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      .||.+.+..+.-.+|.++.+.+....-++..+..++..|+..||+.||+.-.++..++.
T Consensus       226 ~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  226 SPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             CCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence            99999998888888988854433335678889999999999999999995555554443

>KOG0578|consensus

Probab=100.00  E-value=3e-39  Score=258.56  Aligned_cols=192  Identities=18%  Similarity=0.298  Sum_probs=165.7

Q ss_pred             chHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccC
Q psy15108          2 DLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK   81 (223)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~   81 (223)
                      |+++|+..+... +..-+||||++||+|.+.+...                .++|.++..+++++++||+|||.+||+||
T Consensus       331 NiVnfl~Sylv~-deLWVVMEym~ggsLTDvVt~~----------------~~~E~qIA~Icre~l~aL~fLH~~gIiHr  393 (550)
T KOG0578|consen  331 NIVNFLDSYLVG-DELWVVMEYMEGGSLTDVVTKT----------------RMTEGQIAAICREILQGLKFLHARGIIHR  393 (550)
T ss_pred             HHHHHHHHhccc-ceeEEEEeecCCCchhhhhhcc----------------cccHHHHHHHHHHHHHHHHHHHhcceeee
Confidence            456666655444 3355899999999999999764                48999999999999999999999999999


Q ss_pred             CCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q psy15108         82 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD  161 (223)
Q Consensus        82 di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~  161 (223)
                      |||..||+++.++.+|++|||++........ .....+||++|+|||++....|..++||||||++..||+ .|..||..
T Consensus       394 DIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMv-eGEPPYln  471 (550)
T KOG0578|consen  394 DIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMV-EGEPPYLN  471 (550)
T ss_pred             ccccceeEeccCCcEEEeeeeeeeccccccC-ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHh-cCCCCccC
Confidence            9999999999999999999999986654432 346789999999999999999999999999999999999 89999987


Q ss_pred             CCHHHHHHHHH-hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        162 LSDDQVLSQLE-SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       162 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .++...+..+. .+.+....+..++.++++|+.+||..|+.+|++++|+|+|
T Consensus       472 E~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  472 ENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             CChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            66655555554 4555666778899999999999999999999999999977

>KOG0575|consensus

Probab=100.00  E-value=1.1e-39  Score=262.98  Aligned_cols=177  Identities=18%  Similarity=0.319  Sum_probs=161.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .-+|.|.|.+|+|-++++.++               +++|.++..++.||+.|+.|||+.+|+|||+|-.|++++.+.++
T Consensus        93 VYivLELC~~~sL~el~Krrk---------------~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~V  157 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKRRK---------------PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNV  157 (592)
T ss_pred             eEEEEEecCCccHHHHHHhcC---------------CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcE
Confidence            336889999999999999654               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+|......+. ...+..||+.|.|||++....++..+||||+||++|.|+ .|++||...+..+++..|+...+
T Consensus       158 KIgDFGLAt~le~~~E-rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL-~G~PPFetk~vkety~~Ik~~~Y  235 (592)
T KOG0575|consen  158 KIGDFGLATQLEYDGE-RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLL-VGRPPFETKTVKETYNKIKLNEY  235 (592)
T ss_pred             EecccceeeeecCccc-ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhh-hCCCCcccchHHHHHHHHHhcCc
Confidence            9999999987654321 345788999999999999999999999999999999999 89999999999999999998876


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..  |..++.+.++||.++|+.+|.+|||+++|+.+
T Consensus       236 ~~--P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  236 SM--PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             cc--ccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            65  45788999999999999999999999999976

>KOG1095|consensus

Probab=100.00  E-value=1.8e-38  Score=272.82  Aligned_cols=195  Identities=34%  Similarity=0.573  Sum_probs=173.4

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ...+++|||++|||..+|++.+..        .-....++..+++.++.+|++|+.||++++++||||..+|+|++....
T Consensus       769 ~~~i~leyM~gGDL~sflr~~r~~--------~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~  840 (1025)
T KOG1095|consen  769 PPLILLEYMEGGDLLSFLRESRPA--------PFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRV  840 (1025)
T ss_pred             CcEEEehhcccCcHHHHHHhcccc--------cCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCc
Confidence            355889999999999999987441        112457999999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhc-CCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~-~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +|+.|||+|+......++.... ...+..|+|||.+....++.++|||||||++||+++.|..||.+.++.+++..+..+
T Consensus       841 VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g  920 (1025)
T KOG1095|consen  841 VKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG  920 (1025)
T ss_pred             EEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC
Confidence            9999999999666555554443 477899999999999999999999999999999999999999999999999977777


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      . +++.+..||+.++++|..||+.+|++||+|..|++.+..++..
T Consensus       921 g-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~  964 (1025)
T KOG1095|consen  921 G-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA  964 (1025)
T ss_pred             C-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence            5 8888999999999999999999999999999999988887654

>KOG0198|consensus

Probab=100.00  E-value=1.1e-38  Score=246.58  Aligned_cols=184  Identities=17%  Similarity=0.247  Sum_probs=154.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec-CCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~-~~~   95 (223)
                      +.+.|||+++|||.++++..+.              +|++..+..+..||++||.|||++|++||||||.|||++. ++.
T Consensus        91 ~~i~mEy~~~GsL~~~~~~~g~--------------~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~  156 (313)
T KOG0198|consen   91 YNIFMEYAPGGSLSDLIKRYGG--------------KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGD  156 (313)
T ss_pred             eEeeeeccCCCcHHHHHHHcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCe
Confidence            6688999999999999997652              5999999999999999999999999999999999999999 699


Q ss_pred             eEEcCCCCCcccch--hhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHH
Q psy15108         96 VKISLSGLSKDTYQ--KEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPD-LSDDQVLSQL  171 (223)
Q Consensus        96 ~~l~df~~~~~~~~--~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~-~~~~~~~~~~  171 (223)
                      +|+.|||++.....  ..........+++.|++||++.+.. ...++||||+||++.||+ +|+.||.. ....+....+
T Consensus       157 ~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~-Tg~~PW~~~~~~~~~~~~i  235 (313)
T KOG0198|consen  157 VKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEML-TGKPPWSEFFEEAEALLLI  235 (313)
T ss_pred             EEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEecc-CCCCcchhhcchHHHHHHH
Confidence            99999998876553  1112234578899999999998533 335999999999999999 78999988 4444444455


Q ss_pred             HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ......+..+..++++.++++.+|+..+|++|||+++++.|-..
T Consensus       236 g~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~  279 (313)
T KOG0198|consen  236 GREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL  279 (313)
T ss_pred             hccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence            54445567788899999999999999999999999999988643

>KOG0592|consensus

Probab=100.00  E-value=8.8e-38  Score=249.01  Aligned_cols=178  Identities=20%  Similarity=0.267  Sum_probs=159.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      -+|++|+++|+|.++|++-+               .|++..+..++.||+.||+|||++||+||||||+|||++.+++++
T Consensus       150 YFvLe~A~nGdll~~i~K~G---------------sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhik  214 (604)
T KOG0592|consen  150 YFVLEYAPNGDLLDLIKKYG---------------SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIK  214 (604)
T ss_pred             EEEEEecCCCcHHHHHHHhC---------------cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEE
Confidence            37899999999999999765               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhh----------hh--hcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH
Q psy15108         98 ISLSGLSKDTYQKEYY----------KY--RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD  165 (223)
Q Consensus        98 l~df~~~~~~~~~~~~----------~~--~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~  165 (223)
                      |+|||-++........          ..  ...+||..|.+||.+.....+..+|+|+|||++|.|+ .|+.||.+.+..
T Consensus       215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQml-aG~PPFra~Ney  293 (604)
T KOG0592|consen  215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQML-AGQPPFRAANEY  293 (604)
T ss_pred             EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHh-cCCCCCccccHH
Confidence            9999998865543211          11  3478999999999999999999999999999999999 799999999999


Q ss_pred             HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      .+.+.|..-.+  ..+...++.+.+|+.++|..||.+|++..+|.+|-
T Consensus       294 liFqkI~~l~y--~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp  339 (604)
T KOG0592|consen  294 LIFQKIQALDY--EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP  339 (604)
T ss_pred             HHHHHHHHhcc--cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence            99999887544  44678899999999999999999999999998874

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.4e-37  Score=248.68  Aligned_cols=168  Identities=32%  Similarity=0.624  Sum_probs=137.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhh-hhhhhcCCccccccccccc
Q psy15108         52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAV  130 (223)
Q Consensus        52 ~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~  130 (223)
                      .++++..+..++.||++||.|||+.|++||||||.||+++.++.++++|||+++...... ........++..|+|||.+
T Consensus       169 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~  248 (338)
T cd05102         169 SPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI  248 (338)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHh
Confidence            468999999999999999999999999999999999999999999999999987543221 1122333456789999999


Q ss_pred             ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHH
Q psy15108        131 FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV  210 (223)
Q Consensus       131 ~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  210 (223)
                      .+..++.++||||||+++|+|++.|..||.+....+..............+..+++++.+++.+||+.||.+||++.+++
T Consensus       249 ~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~  328 (338)
T cd05102         249 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALV  328 (338)
T ss_pred             hcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            88889999999999999999996699999876543333332222233444567889999999999999999999999999


Q ss_pred             HHHHHHhhh
Q psy15108        211 TQLSDAMCN  219 (223)
Q Consensus       211 ~~L~~~~~~  219 (223)
                      +.|++++.+
T Consensus       329 ~~l~~~~~~  337 (338)
T cd05102         329 EILGDLLQE  337 (338)
T ss_pred             HHHHHHHhc
Confidence            999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0615|consensus

Probab=100.00  E-value=8.5e-39  Score=247.43  Aligned_cols=178  Identities=18%  Similarity=0.254  Sum_probs=155.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC---
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD---   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~---   93 (223)
                      .-+|+||+.||+|.+++-.++.               +.++.-..+++|++.|+.|||++||+||||||+|||+..+   
T Consensus       251 ~YmVlE~v~GGeLfd~vv~nk~---------------l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~  315 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVVANKY---------------LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAED  315 (475)
T ss_pred             eEEEEEEecCccHHHHHHhccc---------------cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcc
Confidence            3589999999999999988765               8999999999999999999999999999999999999877   


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCC---CcccchHHHHHHHHHHHhCCCCCCCCCCHHH-HHH
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEF---STKSDVYAYACLIWEIFNKGEMPFPDLSDDQ-VLS  169 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~---~~~~Di~slG~il~~l~~~~~~p~~~~~~~~-~~~  169 (223)
                      ..+|++|||+|+..+...  ..++..||+.|.|||++....+   ..++|+||+||++|-++ +|.+||.+..... ..+
T Consensus       316 ~llKItDFGlAK~~g~~s--fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcL-sG~pPFS~~~~~~sl~e  392 (475)
T KOG0615|consen  316 CLLKITDFGLAKVSGEGS--FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCL-SGYPPFSEEYTDPSLKE  392 (475)
T ss_pred             eEEEecccchhhccccce--ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEe-ccCCCcccccCCccHHH
Confidence            678999999998765333  3467899999999999986653   34789999999999999 8999999887766 888


Q ss_pred             HHHhCcccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        170 QLESKKLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       170 ~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ++.++.+...  ....++++..++|.+||..||++||+++|+++|
T Consensus       393 QI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  393 QILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             HHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence            8888776543  345788999999999999999999999999875

>KOG4278|consensus

Probab=100.00  E-value=2.7e-37  Score=250.36  Aligned_cols=203  Identities=28%  Similarity=0.443  Sum_probs=188.7

Q ss_pred             chHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccC
Q psy15108          2 DLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK   81 (223)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~   81 (223)
                      ||++++..|....+.+ +|.||++.|+|.+||+....             ..++.-.++.++.||.+|++||..++++||
T Consensus       324 NLVqLLGVCT~EpPFY-IiTEfM~yGNLLdYLRecnr-------------~ev~avvLlyMAtQIsSaMeYLEkknFIHR  389 (1157)
T KOG4278|consen  324 NLVQLLGVCTHEPPFY-IITEFMCYGNLLDYLRECNR-------------SEVPAVVLLYMATQISSAMEYLEKKNFIHR  389 (1157)
T ss_pred             cHHHHhhhhccCCCeE-EEEecccCccHHHHHHHhch-------------hhcchhHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            7899999999876655 47899999999999998876             568899999999999999999999999999


Q ss_pred             CCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q psy15108         82 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD  161 (223)
Q Consensus        82 di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~  161 (223)
                      |+..+|+|+..+..+|+.|||+++......+.......-++.|.+||.+....++.++|||+|||++||+.|+|-.||++
T Consensus       390 DLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG  469 (1157)
T KOG4278|consen  390 DLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG  469 (1157)
T ss_pred             hhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence            99999999999999999999999988888777777788899999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        162 LSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      .+..+++..+..+ ++...+..||+.+++||+.||++.|.+||+|+|+.+.++.++.+
T Consensus       470 idlSqVY~LLEkg-yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~  526 (1157)
T KOG4278|consen  470 IDLSQVYGLLEKG-YRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS  526 (1157)
T ss_pred             ccHHHHHHHHhcc-ccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence            9999999888877 88999999999999999999999999999999999999988754

>KOG0598|consensus

Probab=100.00  E-value=2.2e-37  Score=236.97  Aligned_cols=178  Identities=18%  Similarity=0.202  Sum_probs=155.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .-+|++|+.||+|.-.|++.+.               |+++.+..++.+|+.||.|||+.||+|||+||+|||++..|++
T Consensus       100 LylVld~~~GGeLf~hL~~eg~---------------F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi  164 (357)
T KOG0598|consen  100 LYLVLDYLNGGELFYHLQREGR---------------FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHI  164 (357)
T ss_pred             EEEEEeccCCccHHHHHHhcCC---------------cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcE
Confidence            3488999999999999998765               9999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||+++..-.. .....+..||+.|+|||.+....|+..+|.||+|+++|+|+ +|..||.+.+...+.+.+...+ 
T Consensus       165 ~LtDFgL~k~~~~~-~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML-~G~pPF~~~~~~~~~~~I~~~k-  241 (357)
T KOG0598|consen  165 KLTDFGLCKEDLKD-GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEML-TGKPPFYAEDVKKMYDKILKGK-  241 (357)
T ss_pred             EEeccccchhcccC-CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHh-hCCCCCcCccHHHHHHHHhcCc-
Confidence            99999999754322 22345579999999999999999999999999999999999 8999999999999999998875 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCC----CHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRP----TFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp----s~~~ll~~  212 (223)
                      ....+.-.+.+.++++.++++.||++|.    ++.++.+|
T Consensus       242 ~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~H  281 (357)
T KOG0598|consen  242 LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH  281 (357)
T ss_pred             CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence            2333445789999999999999999995    45555433

>KOG0583|consensus

Probab=100.00  E-value=8.4e-37  Score=244.31  Aligned_cols=179  Identities=19%  Similarity=0.244  Sum_probs=157.1

Q ss_pred             CCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC
Q psy15108         14 SKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD   93 (223)
Q Consensus        14 ~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~   93 (223)
                      ...+.+|||||.+|+|.+++.+.+               .+++..+..++.|+++|+.|||++|++||||||+||+++.+
T Consensus        92 ~~~~~ivmEy~~gGdL~~~i~~~g---------------~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~  156 (370)
T KOG0583|consen   92 PTKIYIVMEYCSGGDLFDYIVNKG---------------RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGN  156 (370)
T ss_pred             CCeEEEEEEecCCccHHHHHHHcC---------------CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCC
Confidence            333568999999999999999854               49999999999999999999999999999999999999999


Q ss_pred             -CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CC-cccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy15108         94 -LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FS-TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ  170 (223)
Q Consensus        94 -~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~-~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~  170 (223)
                       +.+|++|||++.... ..........|++.|+|||++.+.. |+ .++||||+||++|.|+ +|..||...+...+...
T Consensus       157 ~~~~Kl~DFG~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml-~G~~PF~d~~~~~l~~k  234 (370)
T KOG0583|consen  157 EGNLKLSDFGLSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLL-CGRLPFDDSNVPNLYRK  234 (370)
T ss_pred             CCCEEEeccccccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHH-hCCCCCCCccHHHHHHH
Confidence             999999999998653 1222456788999999999999888 85 7899999999999999 89999999888888888


Q ss_pred             HHhCcccCCCCCCC-hHHHHHHHHHhcCCCCCCCCCHHHHHH
Q psy15108        171 LESKKLCWKHSSKT-PEYITSLHEKCIHPHPHQRPTFPSIVT  211 (223)
Q Consensus       171 ~~~~~~~~~~~~~~-~~~~~~li~~~l~~dp~~Rps~~~ll~  211 (223)
                      +..+...  .+..+ +.+++.++.+|+..+|.+|+++.+++.
T Consensus       235 i~~~~~~--~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  235 IRKGEFK--IPSYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             HhcCCcc--CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence            7776544  34555 999999999999999999999999993

>KOG0595|consensus

Probab=100.00  E-value=1.1e-36  Score=235.50  Aligned_cols=181  Identities=15%  Similarity=0.261  Sum_probs=154.5

Q ss_pred             CCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC
Q psy15108         14 SKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD   93 (223)
Q Consensus        14 ~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~   93 (223)
                      .+...+|||||.||||.+||+.++.               +++..+..++.||+.|+++||+++|+||||||+|||++..
T Consensus        81 ~~~i~lVMEyC~gGDLs~yi~~~~~---------------l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~  145 (429)
T KOG0595|consen   81 DDFIYLVMEYCNGGDLSDYIRRRGR---------------LPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTT  145 (429)
T ss_pred             CCeEEEEEEeCCCCCHHHHHHHcCC---------------CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccC
Confidence            3345599999999999999998755               9999999999999999999999999999999999999875


Q ss_pred             ------CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy15108         94 ------LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV  167 (223)
Q Consensus        94 ------~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~  167 (223)
                            ..+||.|||+++......  ...+..|++.|||||++...+|+.++|+||+|+++|+|+ +|+.||......+.
T Consensus       146 ~~~~~~~~LKIADFGfAR~L~~~~--~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l-~g~~Pf~a~t~~eL  222 (429)
T KOG0595|consen  146 ARNDTSPVLKIADFGFARFLQPGS--MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCL-TGKPPFDAETPKEL  222 (429)
T ss_pred             CCCCCCceEEecccchhhhCCchh--HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHH-hCCCCccccCHHHH
Confidence                  457999999999776443  345678899999999999999999999999999999999 89999999999998


Q ss_pred             HHHHHhCcccCCC-CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        168 LSQLESKKLCWKH-SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       168 ~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+..+....+. +...+....+++...++.++.+|.++.+...+
T Consensus       223 ~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~  268 (429)
T KOG0595|consen  223 LLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDH  268 (429)
T ss_pred             HHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence            8888776544433 33456667788888889999999888766543

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-35  Score=231.77  Aligned_cols=180  Identities=23%  Similarity=0.369  Sum_probs=154.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+.+|+|.+++...+               .+++.....++.+++.|+.|||+. +++||||+|.||+++.++.
T Consensus        97 ~~lv~Ey~~~g~L~~~l~~~~---------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~  161 (283)
T PHA02988         97 LSLILEYCTRGYLREVLDKEK---------------DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYK  161 (283)
T ss_pred             eEEEEEeCCCCcHHHHHhhCC---------------CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCc
Confidence            348899999999999998643               489999999999999999999984 8999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCccccccccccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      ++++|||++.......    ....++..|+|||.+.+  ..++.++|||||||++|+++ +|..||.+.+..+....+..
T Consensus       162 ~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~-~g~~Pf~~~~~~~~~~~i~~  236 (283)
T PHA02988        162 LKIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIF-TGKIPFENLTTKEIYDLIIN  236 (283)
T ss_pred             EEEcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHh
Confidence            9999999986443221    23456778999999865  67899999999999999999 69999998888777777765


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                      ....+..+..+++++.+++.+||+.||++||++++++..|+.+
T Consensus       237 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        237 KNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             cCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            5555555667899999999999999999999999999999865

>KOG0616|consensus

Probab=100.00  E-value=3.3e-36  Score=224.34  Aligned_cols=165  Identities=21%  Similarity=0.250  Sum_probs=152.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||+|.+||.|..++++.+.               |++..++.++.||+.|++|||+.+|++||+||+|||+|++|.+
T Consensus       119 lymvmeyv~GGElFS~Lrk~~r---------------F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~i  183 (355)
T KOG0616|consen  119 LYMVMEYVPGGELFSYLRKSGR---------------FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHI  183 (355)
T ss_pred             EEEEEeccCCccHHHHHHhcCC---------------CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcE
Confidence            4489999999999999998765               9999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      |++|||+++......    .+..||+.|+|||.+...++..++|.|+|||++|||+ .|..||...+..++++.|..+..
T Consensus       184 KitDFGFAK~v~~rT----~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMl-aG~pPF~~~~~~~iY~KI~~~~v  258 (355)
T KOG0616|consen  184 KITDFGFAKRVSGRT----WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEML-AGYPPFYDDNPIQIYEKILEGKV  258 (355)
T ss_pred             EEEeccceEEecCcE----EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHH-cCCCCCcCCChHHHHHHHHhCcc
Confidence            999999998765442    5578999999999999999999999999999999999 89999999999999999999876


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCC
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQR  203 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~R  203 (223)
                      ..  |..++..+++|+.++++.|-.+|
T Consensus       259 ~f--P~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  259 KF--PSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             cC--CcccCHHHHHHHHHHHhhhhHhh
Confidence            55  56788899999999999999988

>KOG4721|consensus

Probab=100.00  E-value=1.5e-36  Score=243.63  Aligned_cols=180  Identities=27%  Similarity=0.441  Sum_probs=163.4

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|||||..|-|++.|+..+               +++...+..+..+|+.|+.|||.+.|+|||+|.-|||+..+..+||
T Consensus       189 IiMEfCa~GqL~~VLka~~---------------~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKI  253 (904)
T KOG4721|consen  189 IIMEFCAQGQLYEVLKAGR---------------PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKI  253 (904)
T ss_pred             EeeeccccccHHHHHhccC---------------ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEe
Confidence            8899999999999999764               4999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW  178 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~  178 (223)
                      +|||-++......  ..-...||+.|||||++...+.+.++|||||||++|||+ ++..||.+.+..+++.-+....+.+
T Consensus       254 sDFGTS~e~~~~S--TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmL-T~EiPYkdVdssAIIwGVGsNsL~L  330 (904)
T KOG4721|consen  254 SDFGTSKELSDKS--TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEML-TGEIPYKDVDSSAIIWGVGSNSLHL  330 (904)
T ss_pred             ccccchHhhhhhh--hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHH-hcCCCccccchheeEEeccCCcccc
Confidence            9999887544332  223467899999999999999999999999999999999 8999999999988887777777888


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        179 KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       179 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                      +.+..+|+.++-|+++||+..|.+||+|++++.||.-+
T Consensus       331 pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  331 PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence            88999999999999999999999999999999998643

>KOG0661|consensus

Probab=100.00  E-value=6.3e-36  Score=235.18  Aligned_cols=179  Identities=22%  Similarity=0.315  Sum_probs=147.7

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ...+||||+ ..+|+++++.++              ..|++..++.|++||++||+|+|++|+.|||+||+|||+.....
T Consensus        84 ~L~fVfE~M-d~NLYqLmK~R~--------------r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~  148 (538)
T KOG0661|consen   84 ILYFVFEFM-DCNLYQLMKDRN--------------RLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDV  148 (538)
T ss_pred             eEeeeHHhh-hhhHHHHHhhcC--------------CcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccce
Confidence            344666665 579999999874              48999999999999999999999999999999999999998889


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES-  173 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~-  173 (223)
                      +||+|||+|+...+..  .+...+.|.+|.|||++... -|+.+.|+|++|||++|+. .-+.-|++.+....+..++. 
T Consensus       149 iKiaDFGLARev~Skp--PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~-sLrPLFPG~sE~Dqi~KIc~V  225 (538)
T KOG0661|consen  149 IKIADFGLAREVRSKP--PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELY-SLRPLFPGASEIDQIYKICEV  225 (538)
T ss_pred             eEecccccccccccCC--CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHH-HhcccCCCCcHHHHHHHHHHH
Confidence            9999999999877665  34567889999999998755 4889999999999999998 67777888876554444433 


Q ss_pred             ------------------CcccCCC---------CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 ------------------KKLCWKH---------SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ------------------~~~~~~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                        -.+.++.         .+.++.++.++|..|+++||.+|||+++++++
T Consensus       226 LGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  226 LGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             hCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence                              1112221         13467889999999999999999999999986

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=3e-35  Score=227.84  Aligned_cols=186  Identities=26%  Similarity=0.417  Sum_probs=156.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+              ..+++..++.++.|++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~--------------~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~  146 (266)
T cd05064          81 MMIVTEYMSNGALDSFLRKHE--------------GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVC  146 (266)
T ss_pred             cEEEEEeCCCCcHHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcE
Confidence            448999999999999997643              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+...............++..|+|||.+.+..++.++|||||||++|+++++|..||.+....+....+... .
T Consensus       147 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~  225 (266)
T cd05064         147 KISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG-F  225 (266)
T ss_pred             EECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-C
Confidence            999999775432222111122334567999999988889999999999999999876799999988887777777655 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ..+.+..++..+.+++..||+.+|.+||+++++.+.|.+++
T Consensus       226 ~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~~  266 (266)
T cd05064         226 RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKMV  266 (266)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhhC
Confidence            44556778999999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0193|consensus

Probab=100.00  E-value=1.9e-36  Score=244.14  Aligned_cols=199  Identities=24%  Similarity=0.384  Sum_probs=165.2

Q ss_pred             hHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCC
Q psy15108          3 LKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKD   82 (223)
Q Consensus         3 ~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~d   82 (223)
                      ++=||.++.++.-  .+|.-.|+|.+|+.+|+....              +|...+.+.|+.||++|+.|||.++|+|+|
T Consensus       450 IlLFMG~~~~p~~--AIiTqwCeGsSLY~hlHv~et--------------kfdm~~~idIAqQiaqGM~YLHAK~IIHrD  513 (678)
T KOG0193|consen  450 ILLFMGACMNPPL--AIITQWCEGSSLYTHLHVQET--------------KFDMNTTIDIAQQIAQGMDYLHAKNIIHRD  513 (678)
T ss_pred             heeeehhhcCCce--eeeehhccCchhhhhccchhh--------------hhhHHHHHHHHHHHHHhhhhhhhhhhhhhh
Confidence            3345555555333  677889999999999997765              699999999999999999999999999999


Q ss_pred             CCCCCeeeecCCCeEEcCCCCCcccchh-hhhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCC
Q psy15108         83 IAARNCLISSDLSVKISLSGLSKDTYQK-EYYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMP  158 (223)
Q Consensus        83 i~~~nil~~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p  158 (223)
                      +|+.||++..++.|+|+|||++.....- .........+...|+|||++.   ..+|+..+||||||+++|||+ +|.+|
T Consensus       514 LKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELl-tg~lP  592 (678)
T KOG0193|consen  514 LKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELL-TGELP  592 (678)
T ss_pred             ccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHH-hCcCC
Confidence            9999999999999999999998654322 122234456678899999986   346899999999999999999 89999


Q ss_pred             CCCCCHHHHHHHHHhCcc---cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        159 FPDLSDDQVLSQLESKKL---CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      |......+++..+.++..   ......++++++++|+..||.+++++||.|.+|+..|+.++.
T Consensus       593 ysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  593 YSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             cCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            998888888777777622   233346789999999999999999999999999999888775

>KOG0582|consensus

Probab=100.00  E-value=4.7e-36  Score=234.35  Aligned_cols=180  Identities=19%  Similarity=0.304  Sum_probs=152.1

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +||.|+.+||+.++|+..-.             ..++|..+..+++++++||.|||.+|.+|||||+.|||++.+|.+++
T Consensus       101 vVmpfMa~GS~ldIik~~~~-------------~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkL  167 (516)
T KOG0582|consen  101 VVMPFMAGGSLLDIIKTYYP-------------DGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKL  167 (516)
T ss_pred             EeehhhcCCcHHHHHHHHcc-------------ccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEE
Confidence            89999999999999997654             45999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhh---hhhhhcCCccccccccccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         99 SLSGLSKDTYQKE---YYKYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        99 ~df~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +|||.+......+   ...++...++++|++||++..  ..|+.++|||||||+..|++ +|..||....+.+++....+
T Consensus       168 adFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA-~G~aPf~k~pPmkvLl~tLq  246 (516)
T KOG0582|consen  168 ADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELA-HGHAPFSKYPPMKVLLLTLQ  246 (516)
T ss_pred             cCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHh-cCCCCcccCChHHHHHHHhc
Confidence            9999876655433   112366789999999999543  45999999999999999999 89999999998877665544


Q ss_pred             CcccC--------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCW--------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +.+..        .....++..+++++..||..||.+|||+++++++
T Consensus       247 n~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  247 NDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             CCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            43321        1123456789999999999999999999999876

>KOG0589|consensus

Probab=100.00  E-value=4.6e-36  Score=238.13  Aligned_cols=188  Identities=16%  Similarity=0.245  Sum_probs=167.2

Q ss_pred             HhhcCCCCCC---CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCC
Q psy15108          9 ATRKDSKDKS---GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA   85 (223)
Q Consensus         9 ~~~~~~~~~~---~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~   85 (223)
                      +++.+.++..   +||+||+||+|.+.|+..++             ..|+++.+..++.|++.|+.|||+++|+|||+|+
T Consensus        68 y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~-------------~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~  134 (426)
T KOG0589|consen   68 YKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKG-------------VLFPEERILKWFVQILLAVNYLHENRVLHRDLKC  134 (426)
T ss_pred             eccchhcCCceEEEEEeecCCCCHHHHHHHHhh-------------ccccHHHHHHHHHHHHHHHHHHHhhhhhcccchh
Confidence            3344444433   78999999999999998874             4799999999999999999999999999999999


Q ss_pred             CCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH
Q psy15108         86 RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD  165 (223)
Q Consensus        86 ~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~  165 (223)
                      .||+++.++.++++|||+++....... ......||+.|++||.+.+.+|..++|||||||++|||+ .-+.+|...+..
T Consensus       135 ~Nifltk~~~VkLgDfGlaK~l~~~~~-~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~-~lk~aF~a~~m~  212 (426)
T KOG0589|consen  135 ANIFLTKDKKVKLGDFGLAKILNPEDS-LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMC-TLKPAFKASNMS  212 (426)
T ss_pred             hhhhccccCceeecchhhhhhcCCchh-hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHH-hcccccCccchH
Confidence            999999999999999999987765542 235678999999999999999999999999999999999 789999999999


Q ss_pred             HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +....+.... ..+.+...+.+++.++..|+..+|..||++.+++.+
T Consensus       213 ~Li~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  213 ELILKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            9999888874 556678899999999999999999999999999876

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=5.5e-35  Score=233.57  Aligned_cols=168  Identities=33%  Similarity=0.644  Sum_probs=136.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhh-hhhhhcCCccccccccccc
Q psy15108         52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAV  130 (223)
Q Consensus        52 ~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~  130 (223)
                      ..+++..+..++.||++||.|||+.+++||||||.||+++.++.++++|||++....... ........++..|++||.+
T Consensus       168 ~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~  247 (337)
T cd05054         168 EPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESI  247 (337)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHh
Confidence            368999999999999999999999999999999999999999999999999987643222 1122334456779999999


Q ss_pred             ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHH
Q psy15108        131 FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV  210 (223)
Q Consensus       131 ~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  210 (223)
                      .+..++.++|+||+||+++++++.|..||.+....+..............+...++++.+++.+||+.+|++||++.+++
T Consensus       248 ~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell  327 (337)
T cd05054         248 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELV  327 (337)
T ss_pred             cCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            98999999999999999999995599999875543333222222233344556788899999999999999999999999


Q ss_pred             HHHHHHhhh
Q psy15108        211 TQLSDAMCN  219 (223)
Q Consensus       211 ~~L~~~~~~  219 (223)
                      ++|++++.+
T Consensus       328 ~~l~~~~~~  336 (337)
T cd05054         328 EILGDLLQE  336 (337)
T ss_pred             HHHHHHHhc
Confidence            999998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=5.9e-35  Score=225.72  Aligned_cols=187  Identities=28%  Similarity=0.473  Sum_probs=157.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++.....             ..+++..++.++.|+++||.|||+.+++|+||+|+||+++.++.+
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~~-------------~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~  143 (263)
T cd05052          77 FYIITEFMTYGNLLDYLRECNR-------------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV  143 (263)
T ss_pred             cEEEEEeCCCCcHHHHHHhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcE
Confidence            4588999999999999976433             458999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++................+..|++||...+..++.++|+||||+++|+|++.|..||.+....+....+... .
T Consensus       144 kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~  222 (263)
T cd05052         144 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-Y  222 (263)
T ss_pred             EeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-C
Confidence            999999987554322211122333567999999988889999999999999999995599999888777776666554 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ....+..++.++.+++.+||..+|++||++.++++.|+.++
T Consensus       223 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  263 (263)
T cd05052         223 RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF  263 (263)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence            45556778999999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0604|consensus

Probab=100.00  E-value=6.2e-36  Score=223.46  Aligned_cols=196  Identities=13%  Similarity=0.226  Sum_probs=165.7

Q ss_pred             CchHHHHHHhhcCCCCCC---CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q psy15108          1 GDLKQFLLATRKDSKDKS---GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR   77 (223)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~---~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~   77 (223)
                      +++++|++.+.+...+..   +|||.++||+|...|++++.             ..|++.++..|+.||..|+.|||+.+
T Consensus       115 ~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~-------------~afTErea~eI~~qI~~Av~~lH~~n  181 (400)
T KOG0604|consen  115 PHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGD-------------QAFTEREASEIMKQIGLAVRYLHSMN  181 (400)
T ss_pred             CceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHccc-------------ccchHHHHHHHHHHHHHHHHHHHhcc
Confidence            367889999998666633   89999999999999998866             67999999999999999999999999


Q ss_pred             cccCCCCCCCeeeecC---CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhC
Q psy15108         78 LIHKDIAARNCLISSD---LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK  154 (223)
Q Consensus        78 i~H~di~~~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~  154 (223)
                      |+|||+||+|+|...+   ..+|++|||+++......  ...+...|+.|.|||++...+|+.+.|+||+||++|-|+ +
T Consensus       182 IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~--~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlL-C  258 (400)
T KOG0604|consen  182 IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG--DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL-C  258 (400)
T ss_pred             hhhccCChhheeeecCCCCcceEecccccccccCCCc--cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhh-c
Confidence            9999999999998754   558999999998765433  334566789999999998888999999999999999999 9


Q ss_pred             CCCCCCCCCHH----HHHHHHHhCcccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        155 GEMPFPDLSDD----QVLSQLESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       155 ~~~p~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      |..||......    .....|..+.+.++.+  ...++..+++|+++|..+|.+|.|+.+++++
T Consensus       259 GyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  259 GYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             CCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence            99999876543    3455566666655544  3567889999999999999999999999865

>KOG0593|consensus

Probab=100.00  E-value=1.7e-35  Score=221.45  Aligned_cols=193  Identities=17%  Similarity=0.258  Sum_probs=153.5

Q ss_pred             chHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccC
Q psy15108          2 DLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK   81 (223)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~   81 (223)
                      ||++++-+++.. ....+|+|||++.=|.++=+.-               ..++.+.+.++++|++.|+.|+|+++++||
T Consensus        62 NLVnLiEVFrrk-rklhLVFE~~dhTvL~eLe~~p---------------~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHR  125 (396)
T KOG0593|consen   62 NLVNLIEVFRRK-RKLHLVFEYCDHTVLHELERYP---------------NGVPSELVKKYLYQLLKAIHFCHKNNCIHR  125 (396)
T ss_pred             hHHHHHHHHHhc-ceeEEEeeecchHHHHHHHhcc---------------CCCCHHHHHHHHHHHHHHhhhhhhcCeecc
Confidence            677787777652 2356999999987666665433               359999999999999999999999999999


Q ss_pred             CCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCC
Q psy15108         82 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP  160 (223)
Q Consensus        82 di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~  160 (223)
                      ||||+||+++.++.+|+||||+|+.... ....+...+.|.+|.|||.+.+ .+|..++|||++||++.||+ +|..-|+
T Consensus       126 DIKPENILit~~gvvKLCDFGFAR~L~~-pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~-~G~pL~P  203 (396)
T KOG0593|consen  126 DIKPENILITQNGVVKLCDFGFARTLSA-PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELL-TGEPLWP  203 (396)
T ss_pred             cCChhheEEecCCcEEeccchhhHhhcC-CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHh-cCCcCCC
Confidence            9999999999999999999999987653 2223455678899999999987 67999999999999999999 8999999


Q ss_pred             CCCHHHHHHHHHhC-------------------cccCCC----------CCCChHHHHHHHHHhcCCCCCCCCCHHHHHH
Q psy15108        161 DLSDDQVLSQLESK-------------------KLCWKH----------SSKTPEYITSLHEKCIHPHPHQRPTFPSIVT  211 (223)
Q Consensus       161 ~~~~~~~~~~~~~~-------------------~~~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  211 (223)
                      +.+....+..|...                   ....+.          .++.+..+.+++.+|++.||.+|++.++++.
T Consensus       204 G~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  204 GRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             CcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            88765444333220                   011111          1334567889999999999999999999986


Q ss_pred             H
Q psy15108        212 Q  212 (223)
Q Consensus       212 ~  212 (223)
                      |
T Consensus       284 H  284 (396)
T KOG0593|consen  284 H  284 (396)
T ss_pred             C
Confidence            5

>KOG0588|consensus

Probab=100.00  E-value=1.7e-35  Score=240.80  Aligned_cols=176  Identities=17%  Similarity=0.228  Sum_probs=160.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .-+|.||+++|.|+++|-..+.               +++.++.++++||+.|+.|+|..+|+|||+||.|++++..+++
T Consensus        87 lylvlEyv~gGELFdylv~kG~---------------l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nI  151 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVRKGP---------------LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNI  151 (786)
T ss_pred             EEEEEEecCCchhHHHHHhhCC---------------CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCE
Confidence            3488999999999999987654               9999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFS-TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ||.|||+|..-....  ...+..|.++|.+||++.+.+|. .++||||-|||+|.|+ +|.+||.+.+...++.+++++.
T Consensus       152 KIADFGMAsLe~~gk--lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALL-tG~LPFdDdNir~LLlKV~~G~  228 (786)
T KOG0588|consen  152 KIADFGMASLEVPGK--LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALL-TGKLPFDDDNIRVLLLKVQRGV  228 (786)
T ss_pred             eeeccceeecccCCc--cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHH-hCCCCCCCccHHHHHHHHHcCc
Confidence            999999986544333  45677899999999999999985 6899999999999999 8999999999999999999987


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +..  |..++.++.+|+.+|+..||..|.|.+||++|
T Consensus       229 f~M--Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  229 FEM--PSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             ccC--CCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence            665  58899999999999999999999999999987

>KOG0200|consensus

Probab=100.00  E-value=6e-35  Score=248.02  Aligned_cols=216  Identities=31%  Similarity=0.566  Sum_probs=177.8

Q ss_pred             CchHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhh-hccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcc
Q psy15108          1 GDLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI   79 (223)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~   79 (223)
                      +|+++++.++.. .....+|+||+..|+|.++++.++ .......+........++..+++.+++||+.|++||++.+++
T Consensus       362 ~niv~llG~~t~-~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~v  440 (609)
T KOG0200|consen  362 PNIVNLLGACTQ-DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCV  440 (609)
T ss_pred             cchhhheeeecc-CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCcc
Confidence            467888888888 444668999999999999999887 111111111111113599999999999999999999999999


Q ss_pred             cCCCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCC--cccccccccccccCCCCcccchHHHHHHHHHHHhCCCC
Q psy15108         80 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI--LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEM  157 (223)
Q Consensus        80 H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~--~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~  157 (223)
                      |||+..+||++..+..+|++|||+++..............  .+..|+|||.+....|+.++|||||||++||+++.|..
T Consensus       441 HRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~  520 (609)
T KOG0200|consen  441 HRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGT  520 (609)
T ss_pred             chhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCC
Confidence            9999999999999999999999999865554433322112  57789999999999999999999999999999999999


Q ss_pred             CCCCCC-HHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        158 PFPDLS-DDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       158 p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      ||.+.. .....+.+..+ .+...|..++++++++|+.||+.+|++||+|.++.+.+...+.
T Consensus       521 PYp~~~~~~~l~~~l~~G-~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~  581 (609)
T KOG0200|consen  521 PYPGIPPTEELLEFLKEG-NRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ  581 (609)
T ss_pred             CCCCCCcHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence            999876 56666666666 7788889999999999999999999999999999999988654

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=9.8e-35  Score=226.67  Aligned_cols=197  Identities=32%  Similarity=0.596  Sum_probs=158.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSG-SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~-~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .+++||+++|+|.+++............ ........+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.+
T Consensus        84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~  163 (283)
T cd05048          84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTV  163 (283)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcE
Confidence            3788999999999999875431111000 011122468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... ........++..|+|||.+....++.++|+|||||++|++++.|..||.+....+....+... 
T Consensus       164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~-  242 (283)
T cd05048         164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR-  242 (283)
T ss_pred             EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-
Confidence            999999987543222 112233455678999999888889999999999999999995599999988888777777655 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      .....+..++.++.+++.+||+.+|.+||++++++++|++
T Consensus       243 ~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         243 QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            3445567789999999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.2e-34  Score=234.60  Aligned_cols=166  Identities=30%  Similarity=0.559  Sum_probs=136.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhh-hhhhcCCccccccccccc
Q psy15108         52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAV  130 (223)
Q Consensus        52 ~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~  130 (223)
                      .++++..++.++.||++||.|||+.|++||||||.||+++.++.++++|||++........ .......++..|+|||.+
T Consensus       207 ~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~  286 (374)
T cd05106         207 WPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI  286 (374)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHh
Confidence            4689999999999999999999999999999999999999999999999999865432211 111223345679999999


Q ss_pred             ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHH
Q psy15108        131 FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV  210 (223)
Q Consensus       131 ~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  210 (223)
                      ....++.++|+|||||++|+|++.|..||.....................+...+.++.+++.+||+.||.+||++.+++
T Consensus       287 ~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~  366 (374)
T cd05106         287 FDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQIS  366 (374)
T ss_pred             cCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            88889999999999999999995599999877655444444443344444556789999999999999999999999999


Q ss_pred             HHHHHHh
Q psy15108        211 TQLSDAM  217 (223)
Q Consensus       211 ~~L~~~~  217 (223)
                      +.|++++
T Consensus       367 ~~l~~~~  373 (374)
T cd05106         367 QLIQRQL  373 (374)
T ss_pred             HHHHHHh
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0599|consensus

Probab=100.00  E-value=2.8e-35  Score=217.74  Aligned_cols=178  Identities=19%  Similarity=0.283  Sum_probs=158.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|++-|+.|.|.|+|...-               ++++....+++.|+.+|++|||.++|+|||+||.||+++.+-++
T Consensus        98 ~FlVFdl~prGELFDyLts~V---------------tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i  162 (411)
T KOG0599|consen   98 VFLVFDLMPRGELFDYLTSKV---------------TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNI  162 (411)
T ss_pred             hhhhhhhcccchHHHHhhhhe---------------eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccce
Confidence            568999999999999998654               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc------cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF------DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ  170 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~------~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~  170 (223)
                      +++|||++......+  ......||+.|+|||.+.      ...|+..+|.|+.|+|+|.++ -|..||....+.-++..
T Consensus       163 ~isDFGFa~~l~~Ge--kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL-aGcpPFwHRkQmlMLR~  239 (411)
T KOG0599|consen  163 KISDFGFACQLEPGE--KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL-AGCPPFWHRKQMLMLRM  239 (411)
T ss_pred             EEeccceeeccCCch--hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH-cCCCchhHHHHHHHHHH
Confidence            999999998776554  446678999999999864      234788899999999999999 79999988888888888


Q ss_pred             HHhCcccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        171 LESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       171 ~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ++.+++....+  .+.+...+++|.+||+.||.+|.|++|++.|
T Consensus       240 ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  240 IMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             HHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence            98887765443  5678889999999999999999999999976

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.8e-34  Score=222.25  Aligned_cols=184  Identities=26%  Similarity=0.444  Sum_probs=154.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++...+               .+++..+..++.|++.|+.|||++|++|+||+|.||+++.++.+
T Consensus        70 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~  134 (257)
T cd05116          70 WMLVMELAELGPLNKFLQKNK---------------HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYA  134 (257)
T ss_pred             cEEEEecCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeE
Confidence            347899999999999997543               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh--hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYY--KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++.........  ......++..|++||.+....++.++|+||||+++|++++.|..||......+....+...
T Consensus       135 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~  214 (257)
T cd05116         135 KISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG  214 (257)
T ss_pred             EECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC
Confidence            99999998754332211  1112233467999999887788899999999999999995599999988877777777665


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                       ..++.+..++.++.++|.+||+.||++||++++|...|++.
T Consensus       215 -~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         215 -ERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             -CCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence             34556677899999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG4257|consensus

Probab=100.00  E-value=2e-35  Score=239.25  Aligned_cols=186  Identities=31%  Similarity=0.528  Sum_probs=172.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|||.++.|.|.+||+.++.              .++...+..+++||+.|+.|||+.+++||||..+||++....-+|+
T Consensus       467 ivmEL~~~GELr~yLq~nk~--------------sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKL  532 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQQNKD--------------SLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKL  532 (974)
T ss_pred             EEEecccchhHHHHHHhccc--------------cchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeee
Confidence            78999999999999998765              6999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW  178 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~  178 (223)
                      +|||+++......++.......++.|++||.++.+.++.++|||.|||.+||+++.|..||.+..+..++..+..+ .++
T Consensus       533 aDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG-eRl  611 (974)
T KOG4257|consen  533 ADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG-ERL  611 (974)
T ss_pred             cccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCC-CCC
Confidence            9999999888777776667778899999999999999999999999999999999999999999888888777777 678


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        179 KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       179 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      +.|++||+.++.++.+||.+||.+||.|.++...|..++.+
T Consensus       612 P~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe  652 (974)
T KOG4257|consen  612 PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE  652 (974)
T ss_pred             CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence            88999999999999999999999999999999999987653

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.4e-34  Score=223.38  Aligned_cols=187  Identities=29%  Similarity=0.592  Sum_probs=153.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+|+|.++++....              .+++..++.++.|+++|+.|||+.+++|+||+|+||+++.++.+
T Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~  137 (262)
T cd05058          72 PLVVLPYMKHGDLRNFIRSETH--------------NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTV  137 (262)
T ss_pred             cEEEEecCCCCCHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcE
Confidence            4478999999999999975432              46788889999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh---hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKE---YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +++|||++.......   ........++..|++||.+....++.++||||||+++|++++.+..||...........+..
T Consensus       138 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~  217 (262)
T cd05058         138 KVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQ  217 (262)
T ss_pred             EECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc
Confidence            999999986543221   11112234466799999988888999999999999999999557778887777666666555


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      . ..+..+..+++.+.+++.+||+.+|++||++.+++..|++++.
T Consensus       218 ~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         218 G-RRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             C-CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            4 3344455678899999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=2.9e-34  Score=232.48  Aligned_cols=164  Identities=30%  Similarity=0.575  Sum_probs=133.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhh-hhhhcCCccccccccccc
Q psy15108         52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAV  130 (223)
Q Consensus        52 ~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~  130 (223)
                      ..+++..+..++.||++||.|||+.+++||||||.||+++.++.++++|||++........ ...+....+..|+|||.+
T Consensus       209 ~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~  288 (375)
T cd05104         209 LALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESI  288 (375)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHh
Confidence            3689999999999999999999999999999999999999999999999999875433221 112223445679999999


Q ss_pred             ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHH
Q psy15108        131 FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ-VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI  209 (223)
Q Consensus       131 ~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  209 (223)
                      .+..++.++|+||||+++|++++.|..||....... ....+... .....+...+.++.+++.+||+.||++||+++++
T Consensus       289 ~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei  367 (375)
T cd05104         289 FNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEG-YRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQI  367 (375)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhC-ccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            888899999999999999999966899998765443 33333333 3344455668899999999999999999999999


Q ss_pred             HHHHHHH
Q psy15108        210 VTQLSDA  216 (223)
Q Consensus       210 l~~L~~~  216 (223)
                      ++.|++.
T Consensus       368 l~~l~~~  374 (375)
T cd05104         368 VQLIEQQ  374 (375)
T ss_pred             HHHHHhh
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=4.7e-34  Score=222.58  Aligned_cols=188  Identities=23%  Similarity=0.427  Sum_probs=155.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++++|+++|+|.++++..+.              .+++..+..++.||+.|+.|||+.+++|+||||.||+++.++.++
T Consensus        84 ~~i~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~k  149 (279)
T cd05111          84 QLVTQLSPLGSLLDHVRQHRD--------------SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQ  149 (279)
T ss_pred             EEEEEeCCCCcHHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEE
Confidence            478899999999999986433              589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++....... ........++..|++||...+..++.++|+||||+++|++++.|..||.+.........+..+ .
T Consensus       150 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~  228 (279)
T cd05111         150 IADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG-E  228 (279)
T ss_pred             EcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-C
Confidence            99999987543221 111223345667999999988889999999999999999995599999888776655555444 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      ..+.+..++..+.+++..||..+|.+||++.++++.|..+..+.
T Consensus       229 ~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~  272 (279)
T cd05111         229 RLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP  272 (279)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence            34445567788999999999999999999999999998877654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=4.9e-34  Score=223.45  Aligned_cols=203  Identities=29%  Similarity=0.516  Sum_probs=162.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.+++...+.......  ...+...+++..++.++.|++.||.|||+.|++||||+|.||+++.++.+
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~  159 (288)
T cd05093          82 LIMVFEYMKHGDLNKFLRAHGPDAVLMA--EGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV  159 (288)
T ss_pred             cEEEEEcCCCCCHHHHHHHcCCcccccc--ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence            4588999999999999987653211110  11123459999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... ........++..|+|||.+.+..++.++|+||||+++++|++.|..||...........+....
T Consensus       160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~  239 (288)
T cd05093         160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR  239 (288)
T ss_pred             EeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence            999999987543221 1111223346679999999888889999999999999999955999998888777777776653


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhccC
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN  222 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~  222 (223)
                       ....+..++.++.+++.+||+.+|.+||++.++...|+++...+..
T Consensus       240 -~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~~~  285 (288)
T cd05093         240 -VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKASPV  285 (288)
T ss_pred             -cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhccc
Confidence             2334556788999999999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=5.1e-34  Score=223.67  Aligned_cols=205  Identities=28%  Similarity=0.491  Sum_probs=162.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDK-SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~-~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+|+||+++++|.+++...+...... ..........+++..++.++.||+.|+.|||++|++|+||+|.||+++.++.
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence            448899999999999998754311110 0001112245899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++++|||++........ .......++..|++||.+.+..++.++|+||||+++|+|++.|..||...+..+....+...
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~  241 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG  241 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCC
Confidence            99999999865433221 11123345677999999988889999999999999999995599999888877777666554


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhccC
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN  222 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~  222 (223)
                       .....+..++..+.+++.+||+.+|++||+++++++.|.++.....+
T Consensus       242 -~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~~~  288 (291)
T cd05094         242 -RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKATPI  288 (291)
T ss_pred             -CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhcCc
Confidence             33344556788999999999999999999999999999998765443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0196|consensus

Probab=100.00  E-value=3.6e-36  Score=248.38  Aligned_cols=187  Identities=29%  Similarity=0.489  Sum_probs=171.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      +.+.|||++|+|..+|+++.+              .|+..++..+++.|+.|++||.+.+++||||.++|||++.+..+|
T Consensus       706 MIiTEyMENGsLDsFLR~~DG--------------qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCK  771 (996)
T KOG0196|consen  706 MIITEYMENGSLDSFLRQNDG--------------QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCK  771 (996)
T ss_pred             EEEhhhhhCCcHHHHHhhcCC--------------ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEE
Confidence            367899999999999998755              599999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         98 ISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        98 l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +.|||+++...+..  .........++.|.|||++..++++.++||||+||++||.+++|..||-++.+.++++.+..+ 
T Consensus       772 VsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~g-  850 (996)
T KOG0196|consen  772 VSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQG-  850 (996)
T ss_pred             eccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhc-
Confidence            99999998654332  233344567899999999999999999999999999999999999999999999999999998 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ++++.|..||..+.+||..||++|=..||.|.+|+..|.+++.+
T Consensus       851 yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  851 YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence            88888999999999999999999999999999999999998865

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=6.8e-36  Score=230.62  Aligned_cols=183  Identities=31%  Similarity=0.514  Sum_probs=150.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+++|+|.++|+....             ..+++..+..++.||++||.|||+.+++|++|+++||+++.++.+
T Consensus        76 ~~lv~e~~~~g~L~~~L~~~~~-------------~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~  142 (259)
T PF07714_consen   76 LFLVMEYCPGGSLDDYLKSKNK-------------EPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQV  142 (259)
T ss_dssp             EEEEEE--TTEBHHHHHHHTCT-------------TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEE
T ss_pred             cccccccccccccccccccccc-------------ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            5688999999999999998622             469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      |++|||++....... .........+..|+|||.+....++.++||||||+++||+++.+..||.+.........+... 
T Consensus       143 Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~-  221 (259)
T PF07714_consen  143 KLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQG-  221 (259)
T ss_dssp             EEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTT-
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence            999999987652211 112233455678999999988889999999999999999995588999999888888888655 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      .....+..++..+.+++..||+.+|++||++.++++.|
T Consensus       222 ~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  222 QRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             EETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            55566778899999999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1.2e-34  Score=223.10  Aligned_cols=181  Identities=28%  Similarity=0.507  Sum_probs=153.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.++++.++.             ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.+
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~  141 (256)
T cd05082          75 LYIVTEYMAKGSLVDYLRSRGR-------------SVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVA  141 (256)
T ss_pred             eEEEEECCCCCcHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcE
Confidence            4588999999999999986543             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++.......    .....+..|++||.+....++.++|+||+|+++|++++.|..||...........+... .
T Consensus       142 kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~  216 (256)
T cd05082         142 KVSDFGLTKEASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-Y  216 (256)
T ss_pred             EecCCccceeccccC----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-C
Confidence            999999886543221    22334567999999988888999999999999999996699999887777766666554 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ....+..++..+.+++.+||+.+|++||++.++++.|..
T Consensus       217 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         217 KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            444556788999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=3.6e-34  Score=221.02  Aligned_cols=185  Identities=28%  Similarity=0.477  Sum_probs=155.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.++++....             ..+++..++.++.|+++|+.|||+.+++|+||+|.||+++.++.+
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~  142 (261)
T cd05072          76 IYIITEYMAKGSLLDFLKSDEG-------------GKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMC  142 (261)
T ss_pred             cEEEEecCCCCcHHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcE
Confidence            4488999999999999986533             468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|++||......++.++|+||||+++|++++.|..||...........+... .
T Consensus       143 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~  221 (261)
T cd05072         143 KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-Y  221 (261)
T ss_pred             EECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999987543322111223344667999999888888899999999999999995599999888777777666554 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ..+....++.++.+++.+||+.+|++||+++++.+.|++
T Consensus       222 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         222 RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            445556788999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0610|consensus

Probab=100.00  E-value=1.4e-34  Score=224.30  Aligned_cols=182  Identities=18%  Similarity=0.221  Sum_probs=159.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .-++||||+||+|..+++.+..             .-|+++.+..++.+++-||+|||..||++||+||+|||+..+|++
T Consensus       152 ~cl~meyCpGGdL~~LrqkQp~-------------~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHI  218 (459)
T KOG0610|consen  152 SCLVMEYCPGGDLHSLRQKQPG-------------KRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHI  218 (459)
T ss_pred             eEEEEecCCCccHHHHHhhCCC-------------CccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcE
Confidence            3489999999999999998755             679999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccch-----------------------------h---h-h----------------------hhhhcCCcc
Q psy15108         97 KISLSGLSKDTYQ-----------------------------K---E-Y----------------------YKYRNAILP  121 (223)
Q Consensus        97 ~l~df~~~~~~~~-----------------------------~---~-~----------------------~~~~~~~~~  121 (223)
                      .++||.++.....                             .   . .                      ...+..+||
T Consensus       219 MLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGT  298 (459)
T KOG0610|consen  219 MLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGT  298 (459)
T ss_pred             EeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccc
Confidence            9999988643110                             0   0 0                      011234778


Q ss_pred             cccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCC
Q psy15108        122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPH  201 (223)
Q Consensus       122 ~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~  201 (223)
                      ..|+|||++.+...+.++|.|+|||++|||+ +|..||.+.+..+++.++.......+..+..+..+++||+++|.+||.
T Consensus       299 hEYlAPEvI~G~GHgsAVDWWtfGIflYEmL-yG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~  377 (459)
T KOG0610|consen  299 HEYLAPEVIRGEGHGSAVDWWTFGIFLYEML-YGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPS  377 (459)
T ss_pred             cccccceeeecCCCCchhhHHHHHHHHHHHH-hCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChh
Confidence            8899999999999999999999999999999 899999999999999999988787777777889999999999999999


Q ss_pred             CCCC----HHHHHHH
Q psy15108        202 QRPT----FPSIVTQ  212 (223)
Q Consensus       202 ~Rps----~~~ll~~  212 (223)
                      +|..    +.||.+|
T Consensus       378 kRlg~~rGA~eIK~H  392 (459)
T KOG0610|consen  378 KRLGSKRGAAEIKRH  392 (459)
T ss_pred             hhhccccchHHhhcC
Confidence            9988    7887765

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=5.3e-34  Score=226.08  Aligned_cols=189  Identities=22%  Similarity=0.420  Sum_probs=156.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+++|+|.++++....              .+++..++.++.||+.||.|||+.+++||||||.||+++.++.+
T Consensus        83 ~~~v~e~~~~g~l~~~l~~~~~--------------~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~  148 (316)
T cd05108          83 VQLITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHV  148 (316)
T ss_pred             ceeeeecCCCCCHHHHHHhccc--------------cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcE
Confidence            4588999999999999986432              58899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++........ ........+..|++||.+....++.++|+||||+++|++++.|..||.+....+....+... 
T Consensus       149 kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-  227 (316)
T cd05108         149 KITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-  227 (316)
T ss_pred             EEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC-
Confidence            9999999975433221 11122334567999999988889999999999999999985699999887766655444433 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      ..++.+..++..+.+++.+||+.+|.+||++.+++..+.++..+.
T Consensus       228 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~  272 (316)
T cd05108         228 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  272 (316)
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence            455556678889999999999999999999999999998886543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=4.1e-34  Score=220.41  Aligned_cols=186  Identities=26%  Similarity=0.433  Sum_probs=155.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+++|+|.+++....              ..+++..++.++.|++.|+.|||++|++|+||+|.||+++.++.+
T Consensus        69 ~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~  134 (257)
T cd05115          69 LMLVMEMASGGPLNKFLSGKK--------------DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYA  134 (257)
T ss_pred             eEEEEEeCCCCCHHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcE
Confidence            448899999999999997533              358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh--hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++........  ........+..|++||.+....++.++|+||||+++|++++.|..||...........+..+
T Consensus       135 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  214 (257)
T cd05115         135 KISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG  214 (257)
T ss_pred             EeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC
Confidence            9999999875432221  11111223567999999888888999999999999999985699999988887777666665


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                       .....+..+++++.+++..||..+|++||++.++.+.|+..+
T Consensus       215 -~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~  256 (257)
T cd05115         215 -KRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY  256 (257)
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence             344556678899999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-34  Score=226.53  Aligned_cols=174  Identities=18%  Similarity=0.215  Sum_probs=150.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..+               .+++..+..++.|++.||.|||++|++||||+|+||+++.++.+
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~  140 (291)
T cd05612          76 LYMLMEYVPGGELFSYLRNSG---------------RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHI  140 (291)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCE
Confidence            458999999999999998653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++......    .....+++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+....+....+.....
T Consensus       141 kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~-~g~~pf~~~~~~~~~~~i~~~~~  215 (291)
T cd05612         141 KLTDFGFAKKLRDR----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEML-VGYPPFFDDNPFGIYEKILAGKL  215 (291)
T ss_pred             EEEecCcchhccCC----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCc
Confidence            99999998654322    12345788899999998888999999999999999999 79999998888887777766543


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                      .  .+...+..+++++.+||+.||.+||+     ++++++|
T Consensus       216 ~--~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         216 E--FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             C--CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence            3  34566888999999999999999995     8888876

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=2.3e-34  Score=240.01  Aligned_cols=182  Identities=20%  Similarity=0.251  Sum_probs=154.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+.+|+|.++|+....           ....+++..+..++.|++.||.|||+.+++||||||+||+++.++.++
T Consensus       115 ~lV~Ey~~~gsL~~~l~~~~~-----------~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vk  183 (496)
T PTZ00283        115 ALVLDYANAGDLRQEIKSRAK-----------TNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVK  183 (496)
T ss_pred             EEEEeCCCCCcHHHHHHHhhc-----------cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEE
Confidence            378999999999999986543           235699999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      |+|||+++...... ........+++.|+|||.+.+..++.++|||||||++|+|+ +|..||...+..+....+.....
T Consensus       184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLl-tG~~Pf~~~~~~~~~~~~~~~~~  262 (496)
T PTZ00283        184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELL-TLKRPFDGENMEEVMHKTLAGRY  262 (496)
T ss_pred             EEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHhcCCC
Confidence            99999987543221 11123456788999999999888999999999999999999 79999998887777776665533


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       .+.+..+++++.+++.+||+.+|.+||++.+++.+
T Consensus       263 -~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        263 -DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             -CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence             34466788999999999999999999999999875

>KOG0201|consensus

Probab=100.00  E-value=7.4e-36  Score=232.72  Aligned_cols=176  Identities=20%  Similarity=0.275  Sum_probs=154.5

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++||||.+|++.++++..+               .+.+..+.-++.+++.|+.|||.++.+|||||+.||++...|.+++
T Consensus        88 iiMey~~gGsv~~lL~~~~---------------~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl  152 (467)
T KOG0201|consen   88 IIMEYCGGGSVLDLLKSGN---------------ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKL  152 (467)
T ss_pred             HHHHHhcCcchhhhhccCC---------------CCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEE
Confidence            7899999999999998543               3699999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW  178 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~  178 (223)
                      .|||.+........++ ...+||+.|||||++....|+.++||||||++.+||+ +|..|+....+...+..|-+. .++
T Consensus       153 ~DfgVa~ql~~~~~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla-~GePP~s~~hPmrvlflIpk~-~PP  229 (467)
T KOG0201|consen  153 ADFGVAGQLTNTVKRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELA-KGEPPHSKLHPMRVLFLIPKS-APP  229 (467)
T ss_pred             Eecceeeeeechhhcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHh-cCCCCCcccCcceEEEeccCC-CCC
Confidence            9999998776655444 7889999999999999889999999999999999999 899999988876555444444 233


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        179 KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       179 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+++.+++|+..||..+|+.||++.++++|
T Consensus       230 ~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  230 RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            3345788999999999999999999999999976

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=8.6e-35  Score=231.26  Aligned_cols=176  Identities=16%  Similarity=0.238  Sum_probs=150.5

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||+||+++.++.++
T Consensus        71 ~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~k  135 (323)
T cd05571          71 CFVMEYANGGELFFHLSRER---------------VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIK  135 (323)
T ss_pred             EEEEeCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEE
Confidence            38899999999999998653               489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++....... .......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||...+.......+....  
T Consensus       136 l~DfG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-tg~~Pf~~~~~~~~~~~~~~~~--  211 (323)
T cd05571         136 ITDFGLCKEGISDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGRLPFYNQDHEKLFELILMEE--  211 (323)
T ss_pred             EeeCCCCcccccCC-CcccceecCccccChhhhcCCCCCccccCcccchhhhhhh-cCCCCCCCCCHHHHHHHHHcCC--
Confidence            99999986432211 1123346788999999998888999999999999999999 8999999888777777666543  


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                      ...+...+.++.+++.+||+.||++||     ++.++++|
T Consensus       212 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         212 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence            334567889999999999999999999     78998865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=7.7e-34  Score=219.46  Aligned_cols=187  Identities=29%  Similarity=0.476  Sum_probs=155.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+|+|.+++.....             ..+++..+..++.|+++||.|||+.+++|+||+|.||+++.++.+
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~  141 (262)
T cd05071          75 IYIVTEYMSKGSLLDFLKGEMG-------------KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC  141 (262)
T ss_pred             cEEEEEcCCCCcHHHHHhhccc-------------cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcE
Confidence            3488999999999999976432             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+...............++..|++||......++.++|+||||+++|++++.|..||.+....+....+... .
T Consensus       142 ~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-~  220 (262)
T cd05071         142 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y  220 (262)
T ss_pred             EeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC-C
Confidence            999999986543332222223345667999999888889999999999999999995589999888777776666554 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ..+.+..++..+.+++.+|++.+|++||+++++++.|+..+
T Consensus       221 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         221 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence            34445678899999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0194|consensus

Probab=100.00  E-value=6.8e-35  Score=235.38  Aligned_cols=186  Identities=34%  Similarity=0.530  Sum_probs=166.4

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|||+|.||+|+++|++.+.              .++..+...++.+.+.||+|||+++++||||-++|+|++.++.+|+
T Consensus       238 ivmEl~~gGsL~~~L~k~~~--------------~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKI  303 (474)
T KOG0194|consen  238 LVMELCNGGSLDDYLKKNKK--------------SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKI  303 (474)
T ss_pred             EEEEecCCCcHHHHHHhCCC--------------CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEe
Confidence            88999999999999998653              5999999999999999999999999999999999999999989999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW  178 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~  178 (223)
                      +|||+++...... ........|..|+|||.+....++.++|||||||++||+++.|..||.+....++...+....++.
T Consensus       304 SDFGLs~~~~~~~-~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~  382 (474)
T KOG0194|consen  304 SDFGLSRAGSQYV-MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRM  382 (474)
T ss_pred             CccccccCCccee-eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccC
Confidence            9999987654111 111234678999999999999999999999999999999988899999999999999996666888


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        179 KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       179 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      +.+...|.++..++.+||..+|++||++.++.+.++.+...
T Consensus       383 ~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~  423 (474)
T KOG0194|consen  383 PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK  423 (474)
T ss_pred             CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence            88889999999999999999999999999999999987654

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=1e-33  Score=219.09  Aligned_cols=186  Identities=29%  Similarity=0.509  Sum_probs=155.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.+++....              ..+++..++.++.|++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        80 ~~iv~e~~~~~~L~~~~~~~~--------------~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~  145 (266)
T cd05033          80 VMIITEYMENGSLDKFLREND--------------GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVC  145 (266)
T ss_pred             eEEEEEcCCCCCHHHHHHhcc--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCE
Confidence            347899999999999997643              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .........+..|++||.+.+..++.++|+||+|+++|++++.|..||...........+... 
T Consensus       146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-  224 (266)
T cd05033         146 KVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG-  224 (266)
T ss_pred             EECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-
Confidence            999999987653111 111112334567999999988889999999999999999985699999888877777666554 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ...+.+..++..+.+++.+||+.+|++||++++++++|++++
T Consensus       225 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~  266 (266)
T cd05033         225 YRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI  266 (266)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence            344445678899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=6.1e-34  Score=219.65  Aligned_cols=184  Identities=29%  Similarity=0.523  Sum_probs=156.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.++++....             ..+++..++.++.|++.|+.|||+.|++|+||+|.||+++.++.+
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~  143 (261)
T cd05148          77 VYIITELMEKGSLLAFLRSPEG-------------QVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVC  143 (261)
T ss_pred             eEEEEeecccCCHHHHHhcCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceE
Confidence            4589999999999999986432             468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+......... ......+..|++||......++.++|+||||++++++++.|..||......+....+... .
T Consensus       144 kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~  221 (261)
T cd05148         144 KVADFGLARLIKEDVYL-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG-Y  221 (261)
T ss_pred             EEccccchhhcCCcccc-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC-C
Confidence            99999988654332211 123344667999999888888999999999999999995589999988877777776654 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ..+.+..+++++.+++.+||+.+|.+||+++++++.|+.
T Consensus       222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         222 RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            455567889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=1e-33  Score=219.65  Aligned_cols=191  Identities=31%  Similarity=0.570  Sum_probs=156.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+|+|.+++...+..         .....+++..+..++.|++.|+.|||+.+++|+||||.||+++.++.+
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  151 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLG---------DCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNV  151 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhccc---------CCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCE
Confidence            34788999999999998654320         112358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++......... .......+..|++||......++.++|+||||+++|++++.|..||......+....+..+ 
T Consensus       152 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-  230 (272)
T cd05075         152 CVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG-  230 (272)
T ss_pred             EECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-
Confidence            99999998764332211 1122345677999999988889999999999999999995589999888877777776655 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      .....+..++..+.+++.+||+.+|++||++.++++.|.+++
T Consensus       231 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~~  272 (272)
T cd05075         231 NRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKAL  272 (272)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence            333445678889999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=8.7e-34  Score=227.25  Aligned_cols=168  Identities=32%  Similarity=0.621  Sum_probs=134.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhh-hhhhhcCCccccccccccc
Q psy15108         52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAV  130 (223)
Q Consensus        52 ~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~  130 (223)
                      ..+++.++..++.|+++||.|||+.+++|+||||.||+++.++.++++|||++....... ........++..|++||.+
T Consensus       174 ~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  253 (343)
T cd05103         174 KVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI  253 (343)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHh
Confidence            357899999999999999999999999999999999999999999999999987543221 1122223445679999999


Q ss_pred             ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHH
Q psy15108        131 FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV  210 (223)
Q Consensus       131 ~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  210 (223)
                      ....++.++|+||||+++|++++.|..||.....................+...++++.+++..||+.+|++||++.+++
T Consensus       254 ~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil  333 (343)
T cd05103         254 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV  333 (343)
T ss_pred             cCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            88889999999999999999996699999876543322222222233344455678899999999999999999999999


Q ss_pred             HHHHHHhhh
Q psy15108        211 TQLSDAMCN  219 (223)
Q Consensus       211 ~~L~~~~~~  219 (223)
                      ++|+.++..
T Consensus       334 ~~l~~~~~~  342 (343)
T cd05103         334 EHLGNLLQA  342 (343)
T ss_pred             HHHHHHHhc
Confidence            999998865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=8e-34  Score=218.59  Aligned_cols=183  Identities=28%  Similarity=0.543  Sum_probs=152.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++..+..              .+++..++.++.|++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~  139 (256)
T cd05059          74 IFIVTEYMANGCLLNYLRERKG--------------KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVV  139 (256)
T ss_pred             eEEEEecCCCCCHHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcE
Confidence            3488999999999999976432              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++................+..|++||.+....++.++|+||||+++|++++.|..||......+....+... .
T Consensus       140 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~  218 (256)
T cd05059         140 KVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-Y  218 (256)
T ss_pred             EECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999887543322111122233457999999988889999999999999999995589999888777777666554 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ....+..++.++.+++.+||..+|++||++.++++.|+
T Consensus       219 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         219 RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT  256 (256)
T ss_pred             cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence            44555678999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=9.7e-34  Score=218.08  Aligned_cols=183  Identities=29%  Similarity=0.502  Sum_probs=152.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||+++|+|.++++...              ..+++..+..++.|++.||.|||+.|++|+||+|.||+++.++.+
T Consensus        74 ~~iv~e~~~~~~L~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~  139 (256)
T cd05114          74 LYIVTEFMENGCLLNYLRQRQ--------------GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVV  139 (256)
T ss_pred             EEEEEEcCCCCcHHHHHHhCc--------------cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeE
Confidence            448899999999999997542              248999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+................+..|+|||.+.+..++.++|+||||+++|++++.|+.||...+..+....+.... 
T Consensus       140 kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-  218 (256)
T cd05114         140 KVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-  218 (256)
T ss_pred             EECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-
Confidence            9999998875433222222223445679999999888889999999999999999944899999888877777776653 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ....+...+.++.+++.+||+.+|++||+++++++.|+
T Consensus       219 ~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         219 RLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            33345556788999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=1.4e-33  Score=218.78  Aligned_cols=189  Identities=30%  Similarity=0.517  Sum_probs=157.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.+++....              ..+++..++.++.+++.|+.|||+.+++|+||+|+||+++.++.+
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~  146 (270)
T cd05056          81 VWIVMELAPLGELRSYLQVNK--------------YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCV  146 (270)
T ss_pred             cEEEEEcCCCCcHHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCe
Confidence            448899999999999997542              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++................+..|++||.+....++.++|+||||++++++++.|..||......+....+... .
T Consensus       147 ~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~  225 (270)
T cd05056         147 KLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG-E  225 (270)
T ss_pred             EEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999886543332111122233467999999888888999999999999999986799999888877766666554 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      ....+..++..+.+++.+|+..+|.+||++.++++.|.++..+.
T Consensus       226 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~  269 (270)
T cd05056         226 RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE  269 (270)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            44556778899999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG0611|consensus

Probab=100.00  E-value=1.6e-34  Score=224.13  Aligned_cols=175  Identities=19%  Similarity=0.259  Sum_probs=156.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      +-+||||..+|+|++||..++.               +++..+..++.||.+|+.|+|+++++|||+|..|||+|.++++
T Consensus       128 IvivMEYaS~GeLYDYiSer~~---------------LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~Ni  192 (668)
T KOG0611|consen  128 IVIVMEYASGGELYDYISERGS---------------LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNI  192 (668)
T ss_pred             EEEEEEecCCccHHHHHHHhcc---------------ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCe
Confidence            4488999999999999998755               9999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFS-TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      |+.|||++..+....  -..+..|.+-|.+||.+++.+|. ..+|.||||+++|.+. +|.+||.+.+....+.+|..+.
T Consensus       193 KIADFGLSNly~~~k--fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLV-yGtMPFDG~Dhk~lvrQIs~Ga  269 (668)
T KOG0611|consen  193 KIADFGLSNLYADKK--FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLV-YGTMPFDGRDHKRLVRQISRGA  269 (668)
T ss_pred             eeeccchhhhhcccc--HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHh-hcccccCCchHHHHHHHhhccc
Confidence            999999997665444  23567888999999999999985 6799999999999999 9999999999999999999987


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ++-+   ..|....-+|++||..+|+.|.|+.+|-.|
T Consensus       270 YrEP---~~PSdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  270 YREP---ETPSDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             ccCC---CCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence            6543   335557889999999999999999999776

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-33  Score=217.71  Aligned_cols=185  Identities=29%  Similarity=0.479  Sum_probs=154.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++.....             ..+++..+..++.|++.|+.+||+.|++|+||+|.||+++.++.+
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~  142 (261)
T cd05068          76 IYIVTELMKYGSLLEYLQGGAG-------------RALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNIC  142 (261)
T ss_pred             eeeeeecccCCcHHHHHhccCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCE
Confidence            4488999999999999976532             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++................+..|++||......++.++|+||||++++++++.|..||.+.........+... .
T Consensus       143 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~  221 (261)
T cd05068         143 KVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-Y  221 (261)
T ss_pred             EECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999887654222111122223457999999988888999999999999999995599999988877777766554 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ..+.+...+..+.+++.+|++.+|.+||++.+++..|+.
T Consensus       222 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         222 RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            444556778999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0033|consensus

Probab=100.00  E-value=2.2e-34  Score=209.95  Aligned_cols=182  Identities=18%  Similarity=0.233  Sum_probs=158.7

Q ss_pred             CCCC-CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee
Q psy15108         13 DSKD-KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS   91 (223)
Q Consensus        13 ~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~   91 (223)
                      .+++ ..+|+|++.||+|..=|-++-.               +++..+-..+.||++||.|+|.++|+|||+||.|+++.
T Consensus        80 ~~~~~~ylvFe~m~G~dl~~eIV~R~~---------------ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLA  144 (355)
T KOG0033|consen   80 QEESFHYLVFDLVTGGELFEDIVAREF---------------YSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLA  144 (355)
T ss_pred             cccceeEEEEecccchHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeee
Confidence            4444 3489999999999887777655               89999999999999999999999999999999999985


Q ss_pred             cC---CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy15108         92 SD---LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL  168 (223)
Q Consensus        92 ~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~  168 (223)
                      ..   ..+|++|||++......  ..-....|++.|++||++...+|+.++|||+-|+++|-++ .|.+||.+.+...++
T Consensus       145 SK~~~A~vKL~~FGvAi~l~~g--~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL-~G~~PF~~~~~~rly  221 (355)
T KOG0033|consen  145 SKAKGAAVKLADFGLAIEVNDG--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL-VGYPPFWDEDQHRLY  221 (355)
T ss_pred             eccCCCceeecccceEEEeCCc--cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHH-hCCCCCCCccHHHHH
Confidence            43   45899999999877632  2345678999999999999999999999999999999999 899999999999999


Q ss_pred             HHHHhCcccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        169 SQLESKKLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       169 ~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ++|+++.+..+  ..+..+++.++++++||..||.+|.|+.|.++|
T Consensus       222 e~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H  267 (355)
T KOG0033|consen  222 EQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH  267 (355)
T ss_pred             HHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence            99998876543  345788999999999999999999999999865

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=8.8e-34  Score=221.14  Aligned_cols=197  Identities=28%  Similarity=0.526  Sum_probs=156.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++...+................+++..++.++.|++.|+.|||+.|++|+||+|+||+++.++.+
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCE
Confidence            34788999999999999876542222111112223468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++........ .......++..|++||.+.+..++.++|+|||||++|++++.|..||...........+..+ 
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-  240 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG-  240 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC-
Confidence            9999998864432211 11122334577999999988889999999999999999995599999887777766666554 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      .....+..++..+.+++.+||+.||.+||++++++..|+
T Consensus       241 ~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         241 RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            334455678899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.1e-33  Score=218.22  Aligned_cols=185  Identities=32%  Similarity=0.483  Sum_probs=154.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||+.+|+|.++++....             ..+++..+..++.|++.||.|||+.|++|+||+|.||+++.++.+
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~  141 (260)
T cd05069          75 IYIVTEFMGKGSLLDFLKEGDG-------------KYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVC  141 (260)
T ss_pred             cEEEEEcCCCCCHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeE
Confidence            3488999999999999986432             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|++||...+..++.++|+||||+++|++++.|..||.+....+....+... .
T Consensus       142 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~  220 (260)
T cd05069         142 KIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-Y  220 (260)
T ss_pred             EECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999986543322222223345567999999888888999999999999999995489999988777777766554 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ..+.+...+..+.+++.+||+.+|++||+++++++.|++
T Consensus       221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         221 RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            444556778999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=2.3e-33  Score=220.56  Aligned_cols=199  Identities=28%  Similarity=0.452  Sum_probs=157.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhcccc-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKD-KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+++|+|.+++...+..... ...........+++..+..++.|++.|+.|||+.|++|+||||.||+++.++.
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~  157 (297)
T cd05089          78 LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLA  157 (297)
T ss_pred             ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCe
Confidence            45889999999999999865432111 00011112346899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++++|||++.......  .......+..|++||......++.++|||||||++|+|++.|..||...........+... 
T Consensus       158 ~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~-  234 (297)
T cd05089         158 SKIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-  234 (297)
T ss_pred             EEECCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-
Confidence            9999999885322110  1111223456999999988888999999999999999995599999988877776666554 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      .....+..++.++.+++.+||+.+|.+||+++++++.|..++.
T Consensus       235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~  277 (297)
T cd05089         235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE  277 (297)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            3444556788999999999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.3e-33  Score=217.77  Aligned_cols=185  Identities=31%  Similarity=0.486  Sum_probs=154.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|+|+.+++|.++++....             ..+++..++.++.+++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~  141 (260)
T cd05070          75 IYIVTEYMSKGSLLDFLKDGEG-------------RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVC  141 (260)
T ss_pred             cEEEEEecCCCcHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceE
Confidence            4488999999999999986432             458999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|+|||......++.++|+||||+++|++++.|..||.+....+....+... .
T Consensus       142 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~  220 (260)
T cd05070         142 KIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-Y  220 (260)
T ss_pred             EeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999986543322112222344567999999888888999999999999999995589999888777777766554 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ..+.+...+..+.+++.+||..+|.+|||++++.+.|++
T Consensus       221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         221 RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            445566788999999999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.5e-33  Score=221.06  Aligned_cols=200  Identities=33%  Similarity=0.611  Sum_probs=159.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGS-GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~-~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+++|+|.++++............ .......+++..++.++.|++.|+.|||+.+++|+||+|.||+++.++.
T Consensus        91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~  170 (293)
T cd05053          91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHV  170 (293)
T ss_pred             eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCe
Confidence            347899999999999998654211111110 1123457999999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++++|||++......... .......+..|++||......++.++|+|||||++|++++.|..||......+....+...
T Consensus       171 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  250 (293)
T cd05053         171 MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG  250 (293)
T ss_pred             EEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC
Confidence            999999998754332211 1112234567999999888889999999999999999996699999888777776666554


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                       ..+..+..++..+.+++.+||..+|++|||+.++++.|.+++
T Consensus       251 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         251 -YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             -CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence             444556677889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-33  Score=217.37  Aligned_cols=185  Identities=29%  Similarity=0.466  Sum_probs=154.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+|+|.+++...+               .+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.+
T Consensus        70 ~~~v~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~  134 (257)
T cd05060          70 LMLVMELAPLGPLLKYLKKRR---------------EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQA  134 (257)
T ss_pred             eEEEEEeCCCCcHHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcE
Confidence            458899999999999998653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh--hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYY--KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++.........  ......++..|++||...+..++.++|+||||+++|++++.|..||...+..+....+...
T Consensus       135 kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~  214 (257)
T cd05060         135 KISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG  214 (257)
T ss_pred             EeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC
Confidence            99999998755332211  1111223456999999988889999999999999999995599999888877777666555


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                       ...+.+..++..+.+++.+||..+|++||++.++++.|+++.
T Consensus       215 -~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         215 -ERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             -CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence             344556678899999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.4e-33  Score=219.85  Aligned_cols=186  Identities=23%  Similarity=0.420  Sum_probs=153.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++++|+++|+|.++++...              ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++
T Consensus        84 ~l~~~~~~~g~l~~~l~~~~--------------~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~k  149 (279)
T cd05109          84 QLVTQLMPYGCLLDYVRENK--------------DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVK  149 (279)
T ss_pred             EEEEEcCCCCCHHHHHhhcc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEE
Confidence            47889999999999997642              2589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++........ ........+..|++||...+..++.++|+|||||++||+++.|..||...........+... .
T Consensus       150 L~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~  228 (279)
T cd05109         150 ITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG-E  228 (279)
T ss_pred             ECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-C
Confidence            999999875432211 11112234567999999988889999999999999999985599999887776666555554 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      ..+.+..++..+.+++.+||+.||++||++.+++..|.++..
T Consensus       229 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         229 RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            344456788999999999999999999999999999887754

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=2.7e-33  Score=220.88  Aligned_cols=205  Identities=29%  Similarity=0.536  Sum_probs=162.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccc-cCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSK-DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+.+|+|.+++...+.... ............+++..++.++.||++||.|||+.|++|+||||.||+++.++.
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~  175 (304)
T cd05101          96 LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNV  175 (304)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCc
Confidence            3488999999999999987543111 111111112346899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++++|||++......... ......++..|+|||.+.+..++.++|+||||+++|++++.|..||......+....+...
T Consensus       176 ~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  255 (304)
T cd05101         176 MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG  255 (304)
T ss_pred             EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC
Confidence            999999998755332211 1122334567999999988889999999999999999996688899888887777776655


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhccC
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN  222 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~  222 (223)
                       .....+..++.++.+++.+||+.+|.+||++.++++.|.+++.-.-|
T Consensus       256 -~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~~  302 (304)
T cd05101         256 -HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTTN  302 (304)
T ss_pred             -CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhhc
Confidence             34445567889999999999999999999999999999998765443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0597|consensus

Probab=100.00  E-value=1.7e-34  Score=231.64  Aligned_cols=176  Identities=19%  Similarity=0.296  Sum_probs=158.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .-+|.|||.| +|..+|.+.+.               ++++++..+++++++||.|||+.+|+|||+||+||++.+.+.+
T Consensus        76 ~~vVte~a~g-~L~~il~~d~~---------------lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~  139 (808)
T KOG0597|consen   76 LWVVTEYAVG-DLFTILEQDGK---------------LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTL  139 (808)
T ss_pred             EEEEehhhhh-hHHHHHHhccC---------------CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCce
Confidence            4488899988 99999998765               9999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      |++|||+++....+.. ......|++.|+|||.+.+.+|+..+|+||+||++||++ .|+.||......+..+.|.....
T Consensus       140 KlcdFg~Ar~m~~~t~-vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~-~G~PPF~a~si~~Lv~~I~~d~v  217 (808)
T KOG0597|consen  140 KLCDFGLARAMSTNTS-VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELY-VGQPPFYARSITQLVKSILKDPV  217 (808)
T ss_pred             eechhhhhhhcccCce-eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHh-cCCCCchHHHHHHHHHHHhcCCC
Confidence            9999999987655432 235578999999999999999999999999999999999 89999999999999998888755


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .|  +...+.++..+++.++..||.+|.++.+++.|
T Consensus       218 ~~--p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  218 KP--PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             CC--cccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence            55  34778899999999999999999999999876

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=7.4e-34  Score=236.56  Aligned_cols=183  Identities=17%  Similarity=0.231  Sum_probs=154.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++|++...           ...++++..+..++.|++.||.|||+.+++||||||.||+++.++.+
T Consensus       140 ~~lv~E~~~gg~L~~~l~~~~~-----------~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~  208 (478)
T PTZ00267        140 LLLIMEYGSGGDLNKQIKQRLK-----------EHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGII  208 (478)
T ss_pred             EEEEEECCCCCCHHHHHHHHHh-----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcE
Confidence            4489999999999999976432           23468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++........ .......+++.|+|||.+.+..++.++||||+||++|+|+ +|..||......+....+..+.
T Consensus       209 kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~-tg~~Pf~~~~~~~~~~~~~~~~  287 (478)
T PTZ00267        209 KLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELL-TLHRPFKGPSQREIMQQVLYGK  287 (478)
T ss_pred             EEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCC
Confidence            9999999876533221 1123445788999999998888999999999999999999 7999999888877777766653


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      . .+.+..++.++.+++.+||+.+|++||++++++.+
T Consensus       288 ~-~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        288 Y-DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             C-CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence            3 23455678899999999999999999999998754

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1.2e-33  Score=217.59  Aligned_cols=183  Identities=29%  Similarity=0.542  Sum_probs=151.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++.....              .+++..++.++.||+.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        74 ~~lv~e~~~~~~l~~~i~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~  139 (256)
T cd05113          74 IYIVTEYMSNGCLLNYLREHGK--------------RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCV  139 (256)
T ss_pred             cEEEEEcCCCCcHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCE
Confidence            4588999999999999976432              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+...............++..|++||......++.++|+||||+++|++++.|..||...........+... .
T Consensus       140 kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~  218 (256)
T cd05113         140 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQG-L  218 (256)
T ss_pred             EECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcC-C
Confidence            999999886543332222222344567999999988888999999999999999995499999888777766666555 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ....+...+..+.+++.+||+.+|.+||++.+++..|+
T Consensus       219 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         219 RLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            33345567889999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=5.1e-34  Score=226.18  Aligned_cols=176  Identities=18%  Similarity=0.238  Sum_probs=149.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..+               .+++..+..++.|++.||.|||+.+++||||||+||+++.++.+
T Consensus        71 ~~lv~e~~~gg~L~~~~~~~~---------------~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~  135 (316)
T cd05592          71 LFFVMEYLNGGDLMFHIQSSG---------------RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHI  135 (316)
T ss_pred             EEEEEcCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCE
Confidence            348999999999999997653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||.+.+..+....+...  
T Consensus       136 kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell-~G~~Pf~~~~~~~~~~~i~~~--  211 (316)
T cd05592         136 KIADFGMCKENMNGE-GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEML-IGQSPFHGEDEDELFDSILND--  211 (316)
T ss_pred             EEccCcCCeECCCCC-CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHcC--
Confidence            999999986532221 1223456788999999998888999999999999999999 799999988887777766553  


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHH-HHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFP-SIVT  211 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~-~ll~  211 (223)
                      .+..+..++.++.+++.+||+.+|.+||++. ++++
T Consensus       212 ~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         212 RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            2344566888999999999999999999875 5544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=2.8e-33  Score=217.24  Aligned_cols=199  Identities=27%  Similarity=0.447  Sum_probs=156.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhcccc-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKD-KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..++|||+++|+|.+++...+....+ ...........+++..++.++.|++.|+.|||+.|++|+||+|+||+++.++.
T Consensus        71 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~  150 (270)
T cd05047          71 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV  150 (270)
T ss_pred             ceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCe
Confidence            44889999999999999875431111 11111122346899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++++|||++......  ........+..|++||.+....++.++|+||||++++++++.|..||...+.......+... 
T Consensus       151 ~kl~dfgl~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~-  227 (270)
T cd05047         151 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-  227 (270)
T ss_pred             EEECCCCCccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC-
Confidence            999999988532211  11111223456999999888888999999999999999995599999887776666665544 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      .....+..++.++.+++.+||..+|.+||++.+++..|.++++
T Consensus       228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~~  270 (270)
T cd05047         228 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  270 (270)
T ss_pred             CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhhC
Confidence            3344455678899999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=3e-33  Score=220.57  Aligned_cols=201  Identities=27%  Similarity=0.443  Sum_probs=157.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhcccc-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKD-KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+++|+|.++++..+....+ ......+....+++..++.++.|++.|+.|||+.|++||||+|.||+++.++.
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~  162 (303)
T cd05088          83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV  162 (303)
T ss_pred             ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCc
Confidence            44889999999999999876532111 11111123346899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++++|||++......  ........+..|++||......++.++|+||||++++++++.|..||......+....+... 
T Consensus       163 ~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-  239 (303)
T cd05088         163 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-  239 (303)
T ss_pred             EEeCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC-
Confidence            999999988632211  11111223566999999887788899999999999999995599999887776666655443 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      ..+..+...+.++.+++.+||+.+|++||++++++..|.++++..
T Consensus       240 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~  284 (303)
T cd05088         240 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  284 (303)
T ss_pred             CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            344445567889999999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=2.2e-33  Score=218.56  Aligned_cols=189  Identities=32%  Similarity=0.602  Sum_probs=152.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC--
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL--   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~--   94 (223)
                      ..+++||+++|+|.+++...+..        ......+++..++.++.||+.|+.|||+.+++|+||+|+||+++.++  
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~--------~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~  155 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPR--------PERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPG  155 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCC
Confidence            44789999999999999876431        11223589999999999999999999999999999999999998754  


Q ss_pred             -CeEEcCCCCCcccchhhhhh-hhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         95 -SVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        95 -~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                       .++++|||++.......... ......+..|++||.+.+..++.++|||||||++|++++.|..||......+....+.
T Consensus       156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~  235 (277)
T cd05036         156 RVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT  235 (277)
T ss_pred             cceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence             58999999987543222111 1122335679999999888899999999999999999966999999887776666554


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      .. ..+..+..++..+.+++.+||+.+|++||++.+++++|+
T Consensus       236 ~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         236 GG-GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             cC-CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            43 344556678899999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.8e-33  Score=217.18  Aligned_cols=190  Identities=30%  Similarity=0.581  Sum_probs=156.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++++|+++|+|.+++.......         ....+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++
T Consensus        83 ~~v~e~~~~~~l~~~l~~~~~~~---------~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~k  153 (273)
T cd05035          83 MVILPFMKHGDLHSFLLYSRLGG---------LPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVC  153 (273)
T ss_pred             EEEEeccCCCCHHHHHHHhhccC---------CcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEE
Confidence            46789999999999997654311         123689999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++......... .......+..|++||.+....++.++|+||||+++|++++.|..||.+....+....+... .
T Consensus       154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~  232 (273)
T cd05035         154 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG-N  232 (273)
T ss_pred             ECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-C
Confidence            9999998754332211 1112234567999999888888999999999999999995599999888887777766655 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ....+..++.++.+++.+||+.||++||++.++++.|++++
T Consensus       233 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~~  273 (273)
T cd05035         233 RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL  273 (273)
T ss_pred             CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence            44456678899999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=2.4e-33  Score=218.41  Aligned_cols=196  Identities=30%  Similarity=0.547  Sum_probs=157.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.++++..+....... ........+++..+..++.|++.|+.+||+.|++|+||+|.||+++.++.+
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRSHGPDAAFLK-SPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCCchhhhc-ccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence            4488999999999999987643211110 011233568999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++........ ........+..|+|||.+.+..++.++|+||+|+++|+|++.|..||...+.......+..+.
T Consensus       162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR  241 (280)
T ss_pred             EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence            9999999865432221 112233456789999999888899999999999999999944999998888877777776553


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                       ....+...+..+.+++.+||..+|++||++.|+++.|.
T Consensus       242 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         242 -LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             -cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence             33345578899999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-33  Score=217.40  Aligned_cols=191  Identities=36%  Similarity=0.631  Sum_probs=157.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++.......      .......+++..++.++.|+++|+.+||+.+++|+||+|+||+++.++.+
T Consensus        71 ~~lv~e~~~~~~L~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~  144 (262)
T cd00192          71 LYLVLEYMEGGDLLDYLRKSRPVF------PSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVV  144 (262)
T ss_pred             eEEEEEeccCCcHHHHHhhccccc------cccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcE
Confidence            458899999999999998752100      00012469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||.+....... ........++..|++||......++.++|+||+|++++++++.|..||...........+... 
T Consensus       145 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-  223 (262)
T cd00192         145 KISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG-  223 (262)
T ss_pred             EEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-
Confidence            999999987654332 112233456778999999888788999999999999999996579999988887777777664 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      .....+..++.++.+++.+||..+|.+||++.+++++|+
T Consensus       224 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         224 YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            445556677899999999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=5.4e-34  Score=226.38  Aligned_cols=177  Identities=16%  Similarity=0.207  Sum_probs=150.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.|++.||.|||+.+++||||||.||+++.++.+
T Consensus        71 ~~iv~Ey~~~g~L~~~i~~~~---------------~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~  135 (320)
T cd05590          71 LFFVMEFVNGGDLMFHIQKSR---------------RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHC  135 (320)
T ss_pred             EEEEEcCCCCchHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcE
Confidence            448899999999999997653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||...+..+....+.....
T Consensus       136 kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~g~~Pf~~~~~~~~~~~i~~~~~  213 (320)
T cd05590         136 KLADFGMCKEGIFNG-KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEML-CGHAPFEAENEDDLFEAILNDEV  213 (320)
T ss_pred             EEeeCCCCeecCcCC-CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHh-hCCCCCCCCCHHHHHHHHhcCCC
Confidence            999999986432211 1123346788999999998888999999999999999999 79999999888888777766533


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTF------PSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~------~~ll~~  212 (223)
                        ..+...+.++.+++.+||+.||.+||++      ++++.|
T Consensus       214 --~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h  253 (320)
T cd05590         214 --VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH  253 (320)
T ss_pred             --CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence              3355678999999999999999999998      666554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=3e-33  Score=220.86  Aligned_cols=205  Identities=32%  Similarity=0.552  Sum_probs=160.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSG-KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+.+|+|.+++...+......+... ......+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.
T Consensus        99 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~  178 (307)
T cd05098          99 LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV  178 (307)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCc
Confidence            4488999999999999987543111000000 001235899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhh-hhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++++|||.+.......... ......+..|++||.+.+..++.++|+||+||++|+|++.|..||......+....+...
T Consensus       179 ~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  258 (307)
T cd05098         179 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG  258 (307)
T ss_pred             EEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcC
Confidence            9999999886543222111 111223457999999988888999999999999999995589999887776666665544


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhccC
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN  222 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~  222 (223)
                       .....+..++.++.+++.+||+.+|.+||++.++++.|.+++....|
T Consensus       259 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~~  305 (307)
T cd05098         259 -HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTSN  305 (307)
T ss_pred             -CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhhc
Confidence             34455567789999999999999999999999999999999876544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=4.9e-34  Score=227.45  Aligned_cols=174  Identities=17%  Similarity=0.186  Sum_probs=150.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||+.+|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||+||+++.++.+
T Consensus        93 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~  157 (329)
T PTZ00263         93 VYFLLEFVVGGELFTHLRKAG---------------RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHV  157 (329)
T ss_pred             EEEEEcCCCCChHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCE
Confidence            348899999999999998653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++.......    ....+++.|+|||.+.+..++.++|+|||||++|+|+ +|..||.+.........+.....
T Consensus       158 kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-tg~~pf~~~~~~~~~~~i~~~~~  232 (329)
T PTZ00263        158 KVTDFGFAKKVPDRT----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFI-AGYPPFFDDTPFRIYEKILAGRL  232 (329)
T ss_pred             EEeeccCceEcCCCc----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHH-cCCCCCCCCCHHHHHHHHhcCCc
Confidence            999999987543322    2346788899999998888999999999999999999 79999998888777777766543


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                        ..+...+..+++++.+||+.||.+||+     +++++.|
T Consensus       233 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        233 --KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             --CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence              345567888999999999999999987     6888766

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.8e-34  Score=227.03  Aligned_cols=176  Identities=17%  Similarity=0.218  Sum_probs=149.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.++++..+               .+++..+..++.|++.||.|||+.|++||||||+||+++.++.+
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~---------------~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~  140 (333)
T cd05600          76 LYLAMEYVPGGDFRTLLNNLG---------------VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHI  140 (333)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCE
Confidence            348899999999999997653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++.....    ......+++.|+|||.+.+..++.++||||+||++|+|+ +|..||...+..+....+.....
T Consensus       141 kL~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~  215 (333)
T cd05600         141 KLTDFGLSKGIVT----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFL-CGFPPFSGSTPNETWENLKYWKE  215 (333)
T ss_pred             EEEeCcCCccccc----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhh-hCCCCCCCCCHHHHHHHHHhccc
Confidence            9999999875433    223456788999999998888999999999999999999 79999998887776666554322


Q ss_pred             cCCCC------CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHS------SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+      ..++.++.+++.+||..+|.+||++++++++
T Consensus       216 ~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         216 TLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             cccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            11111      2458899999999999999999999999976

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=2.5e-33  Score=216.20  Aligned_cols=185  Identities=30%  Similarity=0.488  Sum_probs=155.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+|+|.+++.....             ..+++..++.++.|++.||+|||+.|++|+||+|+||+++.++.+
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~  141 (260)
T cd05067          75 IYIITEYMENGSLVDFLKTPEG-------------IKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCC  141 (260)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCE
Confidence            4588999999999999976433             468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|++||.+....++.++|+||||++++++++.|..||.+.+..+....+... .
T Consensus       142 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~  220 (260)
T cd05067         142 KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-Y  220 (260)
T ss_pred             EEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC-C
Confidence            999999886543222222223345677999999988888999999999999999994499999988877776666554 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ..+.+...+.++.+++.+||+.+|++||++++++..|+.
T Consensus       221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         221 RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            445566778899999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.9e-34  Score=225.43  Aligned_cols=177  Identities=16%  Similarity=0.174  Sum_probs=149.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+++|+|.+++...+               .+++..+..++.|++.||.|||+.+++||||||.||+++.++.+
T Consensus        68 ~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~  132 (312)
T cd05585          68 LYLVLAFINGGELFHHLQREG---------------RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHI  132 (312)
T ss_pred             EEEEEcCCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcE
Confidence            448899999999999998643               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++........ ......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||.+....+....+.... 
T Consensus       133 kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~-tg~~pf~~~~~~~~~~~~~~~~-  209 (312)
T cd05585         133 ALCDFGLCKLNMKDDD-KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEML-TGLPPFYDENVNEMYRKILQEP-  209 (312)
T ss_pred             EEEECcccccCccCCC-ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHH-hCCCCcCCCCHHHHHHHHHcCC-
Confidence            9999999874322211 123346788999999998888999999999999999999 8999999888777777666543 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCC---HHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPT---FPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~~ll~~  212 (223)
                       ...+..+++++.+++.+||+.||.+||+   +.+++.|
T Consensus       210 -~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         210 -LRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             -CCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence             3345678899999999999999999985   5666654

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=4.2e-33  Score=218.32  Aligned_cols=202  Identities=29%  Similarity=0.567  Sum_probs=160.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCC---------CCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKS---------GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN   87 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~---------~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~n   87 (223)
                      ..+++||+.+|+|.+++...........         -........+++..++.++.|++.|+.|||+.+++|+||+|+|
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n  157 (290)
T cd05045          78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN  157 (290)
T ss_pred             cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence            3378999999999999986432111000         0111223468999999999999999999999999999999999


Q ss_pred             eeeecCCCeEEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy15108         88 CLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ  166 (223)
Q Consensus        88 il~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~  166 (223)
                      |+++.++.++++|||++....... .........+..|++||...+..++.++|+||||+++++|++.|..||.+....+
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  237 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER  237 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            999999999999999987543222 1111223445679999998888889999999999999999955999998888777


Q ss_pred             HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ....+... ..+..+..++.++.+++..||+.+|++||+++++++.|++++.+
T Consensus       238 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~  289 (290)
T cd05045         238 LFNLLKTG-YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK  289 (290)
T ss_pred             HHHHHhCC-CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence            76665544 45555667889999999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0605|consensus

Probab=100.00  E-value=8.7e-34  Score=226.01  Aligned_cols=177  Identities=18%  Similarity=0.254  Sum_probs=151.8

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +||||++||++..+|...+               .|+++.+..++.+++-|+..+|+.|++||||||.|+|+|..|++||
T Consensus       218 LiMEylPGGD~mTLL~~~~---------------~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKL  282 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMRKD---------------TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKL  282 (550)
T ss_pred             EEEEecCCccHHHHHHhcC---------------cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEee
Confidence            8999999999999998764               4999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchh----------------------h-h-----------------------hhhhcCCccccccccccccc
Q psy15108         99 SLSGLSKDTYQK----------------------E-Y-----------------------YKYRNAILPLRWLPYEAVFD  132 (223)
Q Consensus        99 ~df~~~~~~~~~----------------------~-~-----------------------~~~~~~~~~~~~~~pe~~~~  132 (223)
                      +|||++......                      . .                       ......+||+.|+|||++.+
T Consensus       283 SDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~  362 (550)
T KOG0605|consen  283 SDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG  362 (550)
T ss_pred             ccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc
Confidence            999998432110                      0 0                       00113478999999999999


Q ss_pred             CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC--CCCCCChHHHHHHHHHhcCCCCCCCCC---HH
Q psy15108        133 DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW--KHSSKTPEYITSLHEKCIHPHPHQRPT---FP  207 (223)
Q Consensus       133 ~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps---~~  207 (223)
                      ..|....|.||+|||+|||+ .|.+||.+.++.++...|......+  +....++++.+++|.+|+. ||++|..   +.
T Consensus       363 kgY~~~cDwWSLG~ImyEmL-vGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~  440 (550)
T KOG0605|consen  363 KGYGKECDWWSLGCIMYEML-VGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAE  440 (550)
T ss_pred             CCCCccccHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHH
Confidence            99999999999999999999 8999999999999999998766444  4445678999999999999 9999965   67


Q ss_pred             HHHHH
Q psy15108        208 SIVTQ  212 (223)
Q Consensus       208 ~ll~~  212 (223)
                      ||.+|
T Consensus       441 EIK~H  445 (550)
T KOG0605|consen  441 EIKKH  445 (550)
T ss_pred             HHhcC
Confidence            76654

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=7.1e-34  Score=222.27  Aligned_cols=180  Identities=19%  Similarity=0.306  Sum_probs=145.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.+++...+.             ..+++..+..++.|++.|+.|||+.+++||||||+||+++.++.+
T Consensus        75 ~~lv~e~~~~g~L~~~~~~~~~-------------~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~  141 (285)
T cd05631          75 LCLVLTIMNGGDLKFHIYNMGN-------------PGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHI  141 (285)
T ss_pred             EEEEEEecCCCcHHHHHHhhCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCE
Confidence            3488999999999999875432             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh--C
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES--K  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~--~  174 (223)
                      +++|||++.......  ......++..|+|||.+.+..++.++||||+||++|+|+ +|..||...........+..  .
T Consensus       142 kl~Dfg~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~-~g~~pf~~~~~~~~~~~~~~~~~  218 (285)
T cd05631         142 RISDLGLAVQIPEGE--TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMI-QGQSPFRKRKERVKREEVDRRVK  218 (285)
T ss_pred             EEeeCCCcEEcCCCC--eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHH-hCCCCCCCCCcchhHHHHHHHhh
Confidence            999999987543221  123346788999999999889999999999999999999 79999987654322222211  1


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                      ......+...+.++.+++.+||+.||.+||+     ++++++|
T Consensus       219 ~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         219 EDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             cccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            1223345568899999999999999999997     7888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=7.1e-34  Score=225.98  Aligned_cols=177  Identities=16%  Similarity=0.258  Sum_probs=149.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||+||+++.++.+
T Consensus        70 ~~lv~E~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~  134 (323)
T cd05595          70 LCFVMEYANGGELFFHLSRER---------------VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHI  134 (323)
T ss_pred             EEEEEeCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCE
Confidence            338899999999999997653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||...+.......+.....
T Consensus       135 kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell-~g~~Pf~~~~~~~~~~~~~~~~~  212 (323)
T cd05595         135 KITDFGLCKEGISDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGRLPFYNQDHERLFELILMEEI  212 (323)
T ss_pred             EecccHHhccccCCC-CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHH-hCCCCCCCCCHHHHHHHHhcCCC
Confidence            999999876432211 1122346788999999998888999999999999999999 79999988887777766655433


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                        ..+..+++++.+++.+||+.||.+|+     ++.+++++
T Consensus       213 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         213 --RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             --CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence              33567889999999999999999998     78888765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=1.4e-33  Score=219.88  Aligned_cols=195  Identities=30%  Similarity=0.523  Sum_probs=157.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+|+|.+++......       .+.....+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.+
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~-------~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~  156 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLG-------EANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQV  156 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhcccc-------ccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcE
Confidence            44677889999999999765331       01122469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||+++........ ......++..|++||.+....++.++||||+|+++|++++.|..||...+.......+... 
T Consensus       157 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-  235 (280)
T cd05043         157 KITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-  235 (280)
T ss_pred             EECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-
Confidence            99999998754332211 1112334567999999988888999999999999999995599999888777766665554 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ..+.....+++++.+++.+||..+|++||++.++++.|+++.+.
T Consensus       236 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         236 YRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            44445566789999999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=7.8e-34  Score=226.19  Aligned_cols=177  Identities=16%  Similarity=0.248  Sum_probs=149.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.||+.||.|||+.+++||||||+||+++.++.+
T Consensus        70 ~~lv~Ey~~~g~L~~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~  134 (328)
T cd05593          70 LCFVMEYVNGGELFFHLSRER---------------VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHI  134 (328)
T ss_pred             EEEEEeCCCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcE
Confidence            338899999999999997643               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||...+..+....+.....
T Consensus       135 kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell-tG~~Pf~~~~~~~~~~~~~~~~~  212 (328)
T cd05593         135 KITDFGLCKEGITDA-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGRLPFYNQDHEKLFELILMEDI  212 (328)
T ss_pred             EEecCcCCccCCCcc-cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHh-hCCCCCCCCCHHHHHHHhccCCc
Confidence            999999986432211 1122346788999999998888999999999999999999 79999988887777666654432


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                        ..+..++.++.+++.+||+.||.+|+     ++.++++|
T Consensus       213 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         213 --KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             --cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence              34567889999999999999999997     89999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=1.6e-33  Score=216.83  Aligned_cols=185  Identities=30%  Similarity=0.450  Sum_probs=154.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.+++.++..             ..+++..++.++.|++.||.|||+.+++|+||+|.||+++.++.+
T Consensus        70 ~~~v~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~  136 (257)
T cd05040          70 LMMVTELAPLGSLLDRLRKDAL-------------GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKV  136 (257)
T ss_pred             EEEEEEecCCCcHHHHHHhccc-------------ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEE
Confidence            4478899999999999987542             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++.......  ........++..|++||.+....++.++|+||||+++++|++.|..||......+....+...
T Consensus       137 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~  216 (257)
T cd05040         137 KIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE  216 (257)
T ss_pred             EeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc
Confidence            999999987653321  111112345677999999988889999999999999999995599999888777777666654


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ...+..+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus       217 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         217 GERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            4445555677899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=4.2e-33  Score=216.94  Aligned_cols=192  Identities=30%  Similarity=0.600  Sum_probs=153.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.+++.+.+......     +....+++..+..++.|+++|+.|||+.+++|+||||+||+++.++.+
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~  158 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENN-----PVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  158 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCcccccc-----ccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCE
Confidence            448899999999999997643311100     112357889999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++......... .......+..|++||.+....++.++|+||||+++|++++.+..||.+....+....+....
T Consensus       159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~  238 (277)
T cd05062         159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGG  238 (277)
T ss_pred             EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            99999998654322211 11123446779999999888899999999999999999955889998888777766665542


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                       ....+..++..+.+++.+||+.+|++||++.++++.|+
T Consensus       239 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         239 -LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             -cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence             23345677889999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=1.2e-33  Score=224.12  Aligned_cols=176  Identities=16%  Similarity=0.225  Sum_probs=147.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.+++...+               .+++..+..++.|+++||+|||+.|++||||||.||+++.++.++
T Consensus        72 ~lv~E~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~k  136 (316)
T cd05620          72 FFVMEFLNGGDLMFHIQDKG---------------RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIK  136 (316)
T ss_pred             EEEECCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEE
Confidence            38899999999999997643               489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++....... .......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||...+..+..+.+....  
T Consensus       137 l~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~-~g~~Pf~~~~~~~~~~~~~~~~--  212 (316)
T cd05620         137 IADFGMCKENVFGD-NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEML-IGQSPFHGDDEDELFESIRVDT--  212 (316)
T ss_pred             eCccCCCeecccCC-CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCC--
Confidence            99999886422111 1123345788999999999888999999999999999999 7999999888877777765543  


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHH-HHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFP-SIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~-~ll~~  212 (223)
                      ...+..++.++++++.+||+.||++||++. ++++|
T Consensus       213 ~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h  248 (316)
T cd05620         213 PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGH  248 (316)
T ss_pred             CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            333456788999999999999999999984 66533

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=3.7e-33  Score=219.94  Aligned_cols=188  Identities=31%  Similarity=0.556  Sum_probs=152.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.++++....             ..+++.++..++.|++.|+.|||+++++|+||+|.||+++.++.+
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~~~-------------~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~  180 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRKRE-------------SFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIV  180 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeE
Confidence            4488999999999999976432             348999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... ........++..|++||.+....++.++|+||+|+++|++++.|..||................
T Consensus       181 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~  260 (302)
T cd05055         181 KICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEG  260 (302)
T ss_pred             EECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcC
Confidence            999999987543221 1111223446779999999888899999999999999999955899998776554443333332


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      .....+...+.++.+++.+||..+|++||++.++++.|.+++
T Consensus       261 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~~  302 (302)
T cd05055         261 YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQL  302 (302)
T ss_pred             CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhhC
Confidence            344445567889999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3.7e-33  Score=214.30  Aligned_cols=183  Identities=29%  Similarity=0.503  Sum_probs=149.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+++|.+++...+              ..+++..++.++.|++.||.|||+.+++|+||+|.||+++.++.+
T Consensus        68 ~~lv~e~~~~~~L~~~~~~~~--------------~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~  133 (252)
T cd05084          68 IYIVMELVQGGDFLTFLRTEG--------------PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVL  133 (252)
T ss_pred             eEEEEeeccCCcHHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcE
Confidence            448899999999999997543              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhh-hhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++.......... ......+..|++||.+....++.++|+||+|+++|++++.+..||...........+... 
T Consensus       134 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~-  212 (252)
T cd05084         134 KISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG-  212 (252)
T ss_pred             EECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC-
Confidence            999999986533211111 111123456999999988889999999999999999995699999877766655555443 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      .....+..++..+.+++.+||+.+|++||++.++++.|+
T Consensus       213 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         213 VRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            334455677899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=4e-33  Score=219.89  Aligned_cols=198  Identities=29%  Similarity=0.541  Sum_probs=150.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCC----CCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKS----GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS   92 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~----~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~   92 (223)
                      ..+++||+.+|+|.+++...........    .........+++..++.++.||+.||.|||+.|++|+||||.||+++.
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~  173 (304)
T cd05096          94 LCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGE  173 (304)
T ss_pred             eEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcC
Confidence            4488999999999999976532111100    011223356899999999999999999999999999999999999999


Q ss_pred             CCCeEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCHHHHHHH
Q psy15108         93 DLSVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN-KGEMPFPDLSDDQVLSQ  170 (223)
Q Consensus        93 ~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~-~~~~p~~~~~~~~~~~~  170 (223)
                      ++.++++|||++........ .......++..|+|||.+....++.++|+||||+++|+|++ ++..||......+....
T Consensus       174 ~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~  253 (304)
T cd05096         174 NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIEN  253 (304)
T ss_pred             CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHH
Confidence            99999999999875432221 11223344678999999888889999999999999999974 36778887776665544


Q ss_pred             HHhC------cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        171 LESK------KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       171 ~~~~------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ....      ......+..++..+.+++.+||+.+|++||++.++.+.|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         254 AGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            3221      0112234567889999999999999999999999988875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.1e-32  Score=218.39  Aligned_cols=202  Identities=34%  Similarity=0.567  Sum_probs=159.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDK-SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~-~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+.+|+|.+++.......... ..........+++..+..++.|++.||.|||+.|++|+||+|.||+++.++.
T Consensus        93 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~  172 (314)
T cd05099          93 LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNV  172 (314)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCc
Confidence            447899999999999998754311110 0011112346899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++++|||+++........ .......+..|++||.+.+..++.++|+||||+++|++++.|..||......+....+...
T Consensus       173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  252 (314)
T cd05099         173 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREG  252 (314)
T ss_pred             EEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            999999998754332211 1112223456999999988889999999999999999995589999888877777766554


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       .....+..++.++.+++.+||+.+|++||++.++++.|.++...
T Consensus       253 -~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~  296 (314)
T cd05099         253 -HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA  296 (314)
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence             33445567788999999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=5.8e-33  Score=216.71  Aligned_cols=195  Identities=30%  Similarity=0.559  Sum_probs=155.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~-~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      ++++|+.+++|.+++........... .........+++..+..++.|++.||.|||+.|++||||||.||+++.++.++
T Consensus        85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~k  164 (283)
T cd05091          85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVK  164 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceE
Confidence            57799999999999975432111100 01111234689999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||+++....... ........++.|+|||.+....++.++|+||+|+++|+|++.|..||.+....+....+.... 
T Consensus       165 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-  243 (283)
T cd05091         165 ISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQ-  243 (283)
T ss_pred             ecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-
Confidence            999999875433221 112334456789999999888889999999999999999955889999888888777776663 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ....+..++.++.+++..||+.+|.+||++++++..|.
T Consensus       244 ~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~  281 (283)
T cd05091         244 VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR  281 (283)
T ss_pred             cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence            33456678999999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=5.3e-33  Score=215.30  Aligned_cols=186  Identities=27%  Similarity=0.458  Sum_probs=154.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.++++...              +.+++.++..++.|++.|+.|||+.|++|+|++|.||+++.++.+
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~--------------~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~  146 (268)
T cd05063          81 AMIITEYMENGALDKYLRDHD--------------GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLEC  146 (268)
T ss_pred             cEEEEEcCCCCCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcE
Confidence            348899999999999997532              358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhh--hhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYYK--YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++..........  ......+..|++||.+....++.++|+||||+++|++++.|..||......+....+...
T Consensus       147 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~  226 (268)
T cd05063         147 KVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG  226 (268)
T ss_pred             EECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC
Confidence            999999886543221111  111223456999999988888999999999999999985599999888777777776654


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                       ...+.+..++.++.+++.+||+.+|++||++.++++.|.+++
T Consensus       227 -~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~  268 (268)
T cd05063         227 -FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL  268 (268)
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence             344445567889999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=6.3e-33  Score=212.70  Aligned_cols=183  Identities=30%  Similarity=0.518  Sum_probs=151.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.+++....              ..+++..++.++.+++.|+.|+|+.|++|+||+|.||+++.++.+
T Consensus        67 ~~lv~e~~~~~~L~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~  132 (250)
T cd05085          67 IYIVMELVPGGDFLSFLRKKK--------------DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVL  132 (250)
T ss_pred             cEEEEECCCCCcHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeE
Confidence            448899999999999997543              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++................+..|++||.+....++.++|+||||+++|++++.|..||...........+... .
T Consensus       133 ~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~-~  211 (250)
T cd05085         133 KISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG-Y  211 (250)
T ss_pred             EECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999886433222111122234567999999988888999999999999999995599999888777666666544 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ....+..++..+.+++.+||+.+|++||++.++.+.|.
T Consensus       212 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         212 RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            44455678899999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=7.8e-33  Score=218.17  Aligned_cols=188  Identities=23%  Similarity=0.417  Sum_probs=155.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+++|+|.+++.....              .+++..+..++.|++.||.|||+++++|+||+|.||+++.++.+
T Consensus        83 ~~~v~e~~~~g~l~~~~~~~~~--------------~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~  148 (303)
T cd05110          83 IQLVTQLMPHGCLLDYVHEHKD--------------NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHV  148 (303)
T ss_pred             ceeeehhcCCCCHHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCce
Confidence            4478999999999999976432              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++........ .......++..|++||.+.+..++.++|+||||+++|++++.|..||.+.........+... 
T Consensus       149 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-  227 (303)
T cd05110         149 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG-  227 (303)
T ss_pred             EEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-
Confidence            9999999875432221 11122344567999999988889999999999999999986689999887766655555443 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ...+.+..++..+.+++..||..+|++||+++++++.|.++..+
T Consensus       228 ~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         228 ERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            44444566788899999999999999999999999999987644

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.5e-34  Score=227.82  Aligned_cols=179  Identities=17%  Similarity=0.255  Sum_probs=151.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||.||+++.++.+
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~---------------~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~  140 (350)
T cd05573          76 LYLVMEYMPGGDLMNLLIRKD---------------VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHI  140 (350)
T ss_pred             EEEEEcCCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCE
Confidence            458899999999999998653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh----------------------------hhhhhcCCcccccccccccccCCCCcccchHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKE----------------------------YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLI  148 (223)
Q Consensus        97 ~l~df~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il  148 (223)
                      +++|||++.......                            ........++..|+|||.+.+..++.++|||||||++
T Consensus       141 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  220 (350)
T cd05573         141 KLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVIL  220 (350)
T ss_pred             EeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhh
Confidence            999999987543221                            0112345678899999999988999999999999999


Q ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHh--CcccCCCCCCChHHHHHHHHHhcCCCCCCCCC-HHHHHHH
Q psy15108        149 WEIFNKGEMPFPDLSDDQVLSQLES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT-FPSIVTQ  212 (223)
Q Consensus       149 ~~l~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-~~~ll~~  212 (223)
                      |+|+ +|..||...........+..  .....+....+++++.+++..|+. +|.+||+ +++++++
T Consensus       221 ~ell-~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         221 YEML-YGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             hhhc-cCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            9999 89999998887777776665  223333334468999999999998 9999999 9999876

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-33  Score=215.53  Aligned_cols=180  Identities=17%  Similarity=0.231  Sum_probs=151.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++...+               .+++..+..++.|++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        79 ~~~v~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~  143 (263)
T cd06625          79 LSIFMEYMPGGSVKDQLKAYG---------------ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNV  143 (263)
T ss_pred             EEEEEEECCCCcHHHHHHHhC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCE
Confidence            337789999999999998653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhh--hcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYYKY--RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++...........  ....++..|+|||.+.+..++.++|+||+|+++|+++ +|+.||...............
T Consensus       144 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~~~~~~~~~~~  222 (263)
T cd06625         144 KLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEML-TEKPPWAEFEAMAAIFKIATQ  222 (263)
T ss_pred             EEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHH-hCCCCccccchHHHHHHHhcc
Confidence            9999999865432211111  2344667899999998888999999999999999999 799999887766666555555


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......+..++.++.+++.+||..+|.+||++.+++++
T Consensus       223 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         223 PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            45556667789999999999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=4.9e-33  Score=216.22  Aligned_cols=192  Identities=46%  Similarity=0.786  Sum_probs=158.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.++++.......      ..+...+++..+..++.|++.||.|||+.+++|+||+|.||+++..+.+
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~------~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~  156 (275)
T cd05046          83 HYMILEYTDLGDLKQFLRATKSKDE------KLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREV  156 (275)
T ss_pred             ceEEEEecCCCcHHHHHHhcccccc------cccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcE
Confidence            4588999999999999987642100      0112258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|++||.+.+..++.++|+||||++++++++.|..||...........+.....
T Consensus       157 ~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~  236 (275)
T cd05046         157 KVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKL  236 (275)
T ss_pred             EEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCc
Confidence            99999988654333222333445567799999988888889999999999999999558899988877777777766655


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      .+..+..++..+.+++.+||+.+|.+||++.++++.|.
T Consensus       237 ~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         237 ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            66666778999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.1e-33  Score=226.13  Aligned_cols=174  Identities=14%  Similarity=0.152  Sum_probs=150.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.|++.||.|||+.|++||||||.||+++.++.+
T Consensus       106 ~~lv~Ey~~~g~L~~~i~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~i  170 (340)
T PTZ00426        106 LYLVLEFVIGGEFFTFLRRNK---------------RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFI  170 (340)
T ss_pred             EEEEEeCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCE
Confidence            348899999999999998653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++......    .....+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||...+.......+.....
T Consensus       171 kL~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell-~G~~Pf~~~~~~~~~~~i~~~~~  245 (340)
T PTZ00426        171 KMTDFGFAKVVDTR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEIL-VGCPPFYANEPLLIYQKILEGII  245 (340)
T ss_pred             EEecCCCCeecCCC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHh-cCCCCCCCCCHHHHHHHHhcCCC
Confidence            99999998754322    12346788899999998888899999999999999999 89999998888777777766543


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                        ..+...++.+.+++.+|++.||.+|+     +++++++|
T Consensus       246 --~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        246 --YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             --CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence              33556788899999999999999995     89998876

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.2e-33  Score=224.61  Aligned_cols=177  Identities=16%  Similarity=0.204  Sum_probs=150.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.|+++||.|||+.|++||||||+||+++.++.+
T Consensus        71 ~~lv~E~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~  135 (321)
T cd05591          71 LFFVMEYVNGGDLMFQIQRSR---------------KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHC  135 (321)
T ss_pred             EEEEEeCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCE
Confidence            348999999999999997653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++........ ......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||...+.......+.....
T Consensus       136 kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~-tg~~Pf~~~~~~~~~~~i~~~~~  213 (321)
T cd05591         136 KLADFGMCKEGILNGV-TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMM-AGQPPFEADNEDDLFESILHDDV  213 (321)
T ss_pred             EEeecccceecccCCc-cccccccCccccCHHHHcCCCCCCccceechhHHHHHHh-cCCCCCCCCCHHHHHHHHHcCCC
Confidence            9999998864322211 122345788899999998888999999999999999999 79999999888888877766533


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCC-------CHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRP-------TFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-------s~~~ll~~  212 (223)
                        ..+..++.++.+++.+||+.||++||       ++++++++
T Consensus       214 --~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         214 --LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             --CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence              23456788999999999999999999       77788765

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.5e-33  Score=224.16  Aligned_cols=177  Identities=18%  Similarity=0.264  Sum_probs=149.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||+||+++.++.+
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~~---------------~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~  140 (324)
T cd05587          76 LYFVMEYVNGGDLMYHIQQVG---------------KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHI  140 (324)
T ss_pred             EEEEEcCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCE
Confidence            337899999999999997653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|+|||.+.+..++.++|+||+||++|+|+ +|+.||.+.+..+....+.... 
T Consensus       141 kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell-tG~~pf~~~~~~~~~~~i~~~~-  217 (324)
T cd05587         141 KIADFGMCKENIFGG-KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML-AGQPPFDGEDEDELFQSIMEHN-  217 (324)
T ss_pred             EEeecCcceecCCCC-CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHH-hCCCCCCCCCHHHHHHHHHcCC-
Confidence            999999886432111 1123345788999999999888999999999999999999 7999999888877777776543 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTF-----PSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~ll~~  212 (223)
                       ...+...+.++.+++.+||+.||.+|++.     +++++|
T Consensus       218 -~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  257 (324)
T cd05587         218 -VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH  257 (324)
T ss_pred             -CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence             33456788899999999999999999986     566554

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG1024|consensus

Probab=100.00  E-value=1.8e-33  Score=217.16  Aligned_cols=207  Identities=30%  Similarity=0.514  Sum_probs=175.8

Q ss_pred             hHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCC
Q psy15108          3 LKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKD   82 (223)
Q Consensus         3 ~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~d   82 (223)
                      +.+++..+.++.+...+...+..-|+|..+|...+.+- ++      ....++-.++..++.|++.|+.|||+.+++|.|
T Consensus       349 ll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~-~~------~aqtvtt~qlV~masQla~am~hlh~~~ViHkD  421 (563)
T KOG1024|consen  349 LLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDD-PS------YAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKD  421 (563)
T ss_pred             ccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCC-Cc------cccchhHHHHHHHHHHHHHHHHHHHhcCcccch
Confidence            44444555554444555566677799999999766421 11      235788999999999999999999999999999


Q ss_pred             CCCCCeeeecCCCeEEcCCCCCcccchhhhhhhh-cCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q psy15108         83 IAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD  161 (223)
Q Consensus        83 i~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~-~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~  161 (223)
                      |.++|++++...++|++|-.+++..++..+.-.+ ....|..|+++|.+....|+..+|+||||+++||++|.|+.|+..
T Consensus       422 iAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae  501 (563)
T KOG1024|consen  422 IAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE  501 (563)
T ss_pred             hhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc
Confidence            9999999999999999999999987766533322 345578899999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        162 LSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      .++.++...++++ ++..+|-+||+++..+|..||+.+|++||+++++...|.+..
T Consensus       502 IDPfEm~~ylkdG-yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  502 IDPFEMEHYLKDG-YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             cCHHHHHHHHhcc-ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence            9999999999888 888889999999999999999999999999999999998754

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1e-32  Score=212.88  Aligned_cols=185  Identities=32%  Similarity=0.504  Sum_probs=155.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++.....             ..+++..+..++.+++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        76 ~~~v~e~~~~~~L~~~i~~~~~-------------~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~  142 (261)
T cd05034          76 IYIVTEYMSKGSLLDFLKSGEG-------------KKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVC  142 (261)
T ss_pred             eEEEEeccCCCCHHHHHhcccc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCE
Confidence            4588999999999999986432             468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+................+..|++||.+.+..++.++|+||+|++++++++.|+.||.+.........+... .
T Consensus       143 ~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-~  221 (261)
T cd05034         143 KIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG-Y  221 (261)
T ss_pred             EECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999987654332222233344567999999988888999999999999999995599999888877777766554 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ..+.+...+.++.+++.+||..+|.+||+++++.+.|+.
T Consensus       222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         222 RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            445556678999999999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=8.9e-33  Score=215.73  Aligned_cols=198  Identities=33%  Similarity=0.556  Sum_probs=155.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGS--GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~--~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~   94 (223)
                      ..++|||+.+|+|.+++..........+..  .......+++.++..++.|++.|+.|||+++++|+||+|.||+++.++
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~  161 (283)
T cd05090          82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQL  161 (283)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCC
Confidence            348899999999999997554321111110  111234589999999999999999999999999999999999999999


Q ss_pred             CeEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         95 SVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      .++++|||++........ .......++..|++||.+.+..++.++|+||||+++|+|++.|..||.+.......+.+..
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  241 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK  241 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            999999999875433221 1122334456799999998888899999999999999999559999988777666666655


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      . ...+.+..++..+.+++.+||+.+|.+||++.++.++|..
T Consensus       242 ~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         242 R-QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             C-CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            4 3344566788999999999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.9e-33  Score=222.93  Aligned_cols=176  Identities=16%  Similarity=0.238  Sum_probs=148.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.|++.||.|||+.+++||||||.||+++.++.+
T Consensus        71 ~~lv~ey~~~g~L~~~l~~~~---------------~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~  135 (316)
T cd05619          71 LFFVMEYLNGGDLMFHIQSCH---------------KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHI  135 (316)
T ss_pred             EEEEEeCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCE
Confidence            338899999999999998643               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||...+..+....+.... 
T Consensus       136 kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~-~G~~pf~~~~~~~~~~~i~~~~-  212 (316)
T cd05619         136 KIADFGMCKENMLGD-AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEML-IGQSPFHGHDEEELFQSIRMDN-  212 (316)
T ss_pred             EEccCCcceECCCCC-CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCC-
Confidence            999999886432111 1122345788899999998888999999999999999999 7999999888877777765543 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHH-HHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFP-SIVT  211 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~-~ll~  211 (223)
                       +..+..++.++.+++.+||+.+|++||++. ++++
T Consensus       213 -~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         213 -PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             -CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence             233456788899999999999999999996 6654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=4.7e-33  Score=226.56  Aligned_cols=166  Identities=30%  Similarity=0.613  Sum_probs=136.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhh-hhhhhcCCccccccccccc
Q psy15108         52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAV  130 (223)
Q Consensus        52 ~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~  130 (223)
                      ..+++..+..++.|+++|+.|||+.+++|+||||.||+++.++.++++|||++....... ........++..|++||.+
T Consensus       232 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~  311 (400)
T cd05105         232 EGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESI  311 (400)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhh
Confidence            358999999999999999999999999999999999999999999999999987543222 1122234456779999999


Q ss_pred             ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHH
Q psy15108        131 FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV-LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI  209 (223)
Q Consensus       131 ~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  209 (223)
                      .+..++.++||||||+++|+|++.|..||........ ...+... ..+..+..++.++.+++.+||+.+|++||++.++
T Consensus       312 ~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l  390 (400)
T cd05105         312 FDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSG-YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHL  390 (400)
T ss_pred             cCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcC-CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHH
Confidence            8888999999999999999999668899987654333 3333333 4455566788999999999999999999999999


Q ss_pred             HHHHHHHhh
Q psy15108        210 VTQLSDAMC  218 (223)
Q Consensus       210 l~~L~~~~~  218 (223)
                      .+.|+++++
T Consensus       391 ~~~l~~l~~  399 (400)
T cd05105         391 SDIVESLLP  399 (400)
T ss_pred             HHHHHHHcC
Confidence            999998875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=1.7e-33  Score=223.90  Aligned_cols=176  Identities=18%  Similarity=0.277  Sum_probs=149.5

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.+++...+               .+++..+..++.|++.||.|||+.|++||||||.||+++.++.++
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~k  141 (323)
T cd05616          77 YFVMEYVNGGDLMYQIQQVG---------------RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIK  141 (323)
T ss_pred             EEEEcCCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEE
Confidence            38899999999999997653               489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++....... .......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||.+.+.......+..... 
T Consensus       142 L~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell-tg~~Pf~~~~~~~~~~~i~~~~~-  218 (323)
T cd05616         142 IADFGMCKENMWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML-AGQAPFEGEDEDELFQSIMEHNV-  218 (323)
T ss_pred             EccCCCceecCCCC-CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCC-
Confidence            99999986432211 1123456788999999999888999999999999999999 79999998888888777776543 


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTF-----PSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~ll~~  212 (223)
                       ..+...+.++.+++.+|++.+|.+|++.     ++++++
T Consensus       219 -~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         219 -AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             -CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence             3356788999999999999999999985     565543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=8.3e-33  Score=212.63  Aligned_cols=181  Identities=31%  Similarity=0.518  Sum_probs=152.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++.....             ..+++..++.++.|++.|+.|||+.|++||||+|.||+++.++.+
T Consensus        73 ~~~v~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~  139 (254)
T cd05083          73 LYIVMELMSKGNLVNFLRTRGR-------------ALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVA  139 (254)
T ss_pred             cEEEEECCCCCCHHHHHHhcCc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcE
Confidence            4588999999999999986533             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++......    ......+..|++||.+....++.++|+||||++++++++.|..||......+....+... .
T Consensus       140 kl~Dfg~~~~~~~~----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~  214 (254)
T cd05083         140 KVSDFGLARVGSMG----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-Y  214 (254)
T ss_pred             EECCCccceecccc----CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-C
Confidence            99999988643221    122334567999999888888999999999999999995699999988877776666554 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ....+..++..+.+++.+||+.+|++||++++++..|++
T Consensus       215 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         215 RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            444456788999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.1e-33  Score=215.84  Aligned_cols=192  Identities=32%  Similarity=0.622  Sum_probs=155.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++.........     ......+++..++.++.|++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~  158 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAEN-----NPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTV  158 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhh-----ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCE
Confidence            44789999999999999865431110     0112357899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||+++........ ......++..|++||.+....++.++|+||||+++|++++.|..||......+....+... 
T Consensus       159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-  237 (277)
T cd05032         159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDG-  237 (277)
T ss_pred             EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcC-
Confidence            99999998754433211 1223345677999999888888999999999999999995599999888887777777644 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ..+..+..++.++.+++.+||+.+|++|||+.++++.|+
T Consensus       238 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         238 GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            344556678999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2e-33  Score=222.92  Aligned_cols=177  Identities=17%  Similarity=0.247  Sum_probs=149.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.+
T Consensus        71 ~~lv~e~~~~~~L~~~~~~~~---------------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~  135 (318)
T cd05570          71 LFFVMEYVNGGDLMFHIQRSG---------------RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHI  135 (318)
T ss_pred             EEEEEcCCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcE
Confidence            348899999999999997653               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++........ ......++..|+|||.+.+..++.++|+||+||++|+++ +|..||...+.......+.....
T Consensus       136 kl~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~-~G~~pf~~~~~~~~~~~i~~~~~  213 (318)
T cd05570         136 KIADFGMCKEGILGGV-TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEML-AGQSPFEGDDEDELFQSILEDEV  213 (318)
T ss_pred             EecccCCCeecCcCCC-cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHh-hCCCCCCCCCHHHHHHHHHcCCC
Confidence            9999998864222111 112345778899999999888999999999999999999 79999998887777776665433


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTF-----PSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~ll~~  212 (223)
                        ..+..++.++.+++.+||+.||.+||++     .+++++
T Consensus       214 --~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         214 --RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             --CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence              3355678999999999999999999999     777754

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0199|consensus

Probab=100.00  E-value=1.7e-33  Score=230.54  Aligned_cols=183  Identities=30%  Similarity=0.439  Sum_probs=165.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .++|+|.++.|+|.+.|++...             ..|-...+..++.||+.|+.||.+++++|||+..+|+++.....+
T Consensus       185 ~mMV~ELaplGSLldrLrka~~-------------~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtV  251 (1039)
T KOG0199|consen  185 AMMVFELAPLGSLLDRLRKAKK-------------AILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTV  251 (1039)
T ss_pred             hhHHhhhcccchHHHHHhhccc-------------cceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheeccccee
Confidence            3488999999999999998443             579999999999999999999999999999999999999988899


Q ss_pred             EEcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ||+|||+.+.....+  +........++.|.+||++....++.++|+|++||++|||+++|..||.+-....+++.+..+
T Consensus       252 KI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~  331 (1039)
T KOG0199|consen  252 KICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAG  331 (1039)
T ss_pred             eeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccc
Confidence            999999999876554  333445677888999999999999999999999999999999999999999999999999854


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                       .+++.+..|++.+++++..||..+|++||+|..|.+.+
T Consensus       332 -erLpRPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  332 -ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             -ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence             78888999999999999999999999999999997554

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.8e-32  Score=214.59  Aligned_cols=198  Identities=31%  Similarity=0.603  Sum_probs=157.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||+.+|+|.++++..+....     .......++...+..++.|++.||.|||+.+++|+||||.||+++.++.+
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~  158 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAE-----NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV  158 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccc-----cCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcE
Confidence            4488999999999999987543211     11122456788999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhh-hhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||+++......... .....++..|++||.+....++.++|+|||||++|++++.+..||.+....+....+... 
T Consensus       159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-  237 (288)
T cd05061         159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-  237 (288)
T ss_pred             EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-
Confidence            999999987543322111 122334567999999988888999999999999999996688999888877766665544 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      .....+..+++.+.+++.+||+.+|++||++.++++.|.+.+...
T Consensus       238 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~  282 (288)
T cd05061         238 GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS  282 (288)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCC
Confidence            233445567889999999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-32  Score=211.96  Aligned_cols=181  Identities=31%  Similarity=0.555  Sum_probs=153.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.++++....             ..+++..+..++.|++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~  141 (256)
T cd05039          75 LYIVTEYMAKGSLVDYLRSRGR-------------AVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVA  141 (256)
T ss_pred             eEEEEEecCCCcHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCE
Confidence            4488999999999999986542             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+.......    .....+..|++||.+....++.++|+||+|++++++++.|..||...........+... .
T Consensus       142 ~l~d~g~~~~~~~~~----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~  216 (256)
T cd05039         142 KVSDFGLAKEASQGQ----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-Y  216 (256)
T ss_pred             EEccccccccccccc----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-C
Confidence            999999987552221    12334567999999888888899999999999999995699999888777766665554 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      .+..+..+++++.+++.+||..+|++||+++++++.|+.
T Consensus       217 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         217 RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            445556788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=1.2e-32  Score=212.58  Aligned_cols=185  Identities=29%  Similarity=0.488  Sum_probs=153.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++.....             ..+++..++.++.|++.|+.|||+.|++|+||+|.||+++..+.+
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~  141 (260)
T cd05073          75 IYIITEFMAKGSLLDFLKSDEG-------------SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVC  141 (260)
T ss_pred             eEEEEEeCCCCcHHHHHHhCCc-------------cccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcE
Confidence            4478999999999999976432             457899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+...............++..|++||.+....++.++|+||||++++++++.|..||...+.......+... .
T Consensus       142 ~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~  220 (260)
T cd05073         142 KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-Y  220 (260)
T ss_pred             EECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-C
Confidence            999999886543322112222344567999999988888999999999999999995599999988777666666554 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ..+.+...+.++.+++.+||+.+|++||++.++++.|..
T Consensus       221 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         221 RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            444556788899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.1e-33  Score=222.30  Aligned_cols=177  Identities=16%  Similarity=0.231  Sum_probs=150.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||+.+|+|.++++..+               .+++..+..++.|++.||.|||+.|++||||||.||+++.++.+
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~  139 (323)
T cd05584          75 LYLILEYLSGGELFMHLEREG---------------IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHV  139 (323)
T ss_pred             EEEEEeCCCCchHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCE
Confidence            448899999999999998654               48899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +|+|||++........ ......++..|+|||.+.+..++.++||||+||++|+|+ +|..||...+.......+.... 
T Consensus       140 kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~G~~pf~~~~~~~~~~~~~~~~-  216 (323)
T cd05584         140 KLTDFGLCKESIHEGT-VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDML-TGAPPFTAENRKKTIDKILKGK-  216 (323)
T ss_pred             EEeeCcCCeecccCCC-cccccCCCccccChhhccCCCCCCcceecccHHHHHHHh-cCCCCCCCCCHHHHHHHHHcCC-
Confidence            9999999864322211 122346788999999998888899999999999999999 8999999888877777766653 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                       ...+..+++.+.+++.+||+.+|++||     ++.+++.+
T Consensus       217 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         217 -LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             -CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence             344567789999999999999999999     78888765

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.1e-33  Score=224.09  Aligned_cols=177  Identities=19%  Similarity=0.201  Sum_probs=143.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++|||+.+|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||.||+++.++.++
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~k  145 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRD---------------NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVV  145 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEE
Confidence            38899999999999997653               489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLS----DDQVLSQLE  172 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~----~~~~~~~~~  172 (223)
                      ++|||++...............++..|+|||.+.+.. ++.++|||||||++|+|+ +|..||....    .......+.
T Consensus       146 l~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-tg~~pf~~~~~~~~~~~~~~~~~  224 (332)
T cd05614         146 LTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELL-TGASPFTLEGERNTQSEVSRRIL  224 (332)
T ss_pred             EeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhh-cCCCCCCCCCCCCCHHHHHHHHh
Confidence            9999998754332211223346788999999987654 788999999999999999 7999996432    223333333


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                      ..  ....+...+..+.+++.+||+.||++||     +++++++|
T Consensus       225 ~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         225 KC--DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             cC--CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence            32  2344566889999999999999999999     67788765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0585|consensus

Probab=100.00  E-value=2.6e-34  Score=226.13  Aligned_cols=195  Identities=24%  Similarity=0.286  Sum_probs=158.7

Q ss_pred             hHHHHHHhhc-CCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccC
Q psy15108          3 LKQFLLATRK-DSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK   81 (223)
Q Consensus         3 ~~~~~~~~~~-~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~   81 (223)
                      +++++-+-++ .++..-+|+|||.+|.+..-=               .....+++.++++++..++.||+|||.+||+||
T Consensus       170 VV~LiEvLDDP~s~~~YlVley~s~G~v~w~p---------------~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHR  234 (576)
T KOG0585|consen  170 VVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP---------------PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHR  234 (576)
T ss_pred             eeEEEEeecCcccCceEEEEEeccCCccccCC---------------CCcccccHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence            3344444444 333355899999999854322               112239999999999999999999999999999


Q ss_pred             CCCCCCeeeecCCCeEEcCCCCCcccch----hhhhhhhcCCcccccccccccccCC----CCcccchHHHHHHHHHHHh
Q psy15108         82 DIAARNCLISSDLSVKISLSGLSKDTYQ----KEYYKYRNAILPLRWLPYEAVFDDE----FSTKSDVYAYACLIWEIFN  153 (223)
Q Consensus        82 di~~~nil~~~~~~~~l~df~~~~~~~~----~~~~~~~~~~~~~~~~~pe~~~~~~----~~~~~Di~slG~il~~l~~  153 (223)
                      ||||.|+|++.+|.+||.|||.+.....    ..........||+.|+|||.+....    .+.+.||||+||++|.++ 
T Consensus       235 DIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCll-  313 (576)
T KOG0585|consen  235 DIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLL-  313 (576)
T ss_pred             ccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhh-
Confidence            9999999999999999999998875411    1112234489999999999987632    356899999999999999 


Q ss_pred             CCCCCCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        154 KGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       154 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      .|+.||.+....++...|.......+..+.+.+.++++|.+||.+||++|.++.+|..|.
T Consensus       314 fG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp  373 (576)
T KOG0585|consen  314 FGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP  373 (576)
T ss_pred             hccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence            899999999999999999998777777777889999999999999999999999997764

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=9.1e-34  Score=226.01  Aligned_cols=180  Identities=13%  Similarity=0.201  Sum_probs=148.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.++++....              .+++..+..++.|++.||.|||+.+++||||||.||+++.++.+
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~--------------~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~  141 (330)
T cd05601          76 LYLVMEYQPGGDLLSLLNRYED--------------QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHI  141 (330)
T ss_pred             EEEEECCCCCCCHHHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCE
Confidence            4488999999999999986532              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc------cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF------DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ  170 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~------~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~  170 (223)
                      +++|||++...............++..|+|||.+.      ...++.++||||+||++|+|+ +|..||...........
T Consensus       142 kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~-~g~~Pf~~~~~~~~~~~  220 (330)
T cd05601         142 KLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMI-YGRSPFHEGTSAKTYNN  220 (330)
T ss_pred             EeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeec-cCCCCCCCCCHHHHHHH
Confidence            99999998754433222222346788899999986      345778999999999999999 79999988877777666


Q ss_pred             HHhCcc--cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        171 LESKKL--CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       171 ~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +.....  ..+.....+.++.+++.+|+. +|.+||++++++.|
T Consensus       221 i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         221 IMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             HHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence            655322  223334578899999999998 99999999999865

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=4e-33  Score=218.07  Aligned_cols=180  Identities=15%  Similarity=0.208  Sum_probs=141.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.++++..+....               ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.+
T Consensus        75 ~~lv~e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~  139 (287)
T cd07848          75 LYLVFEYVEKNMLELLEEMP---------------NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVL  139 (287)
T ss_pred             EEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcE
Confidence            45899999988776655432               358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc-
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK-  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~-  175 (223)
                      +++|||++...............++..|+|||.+.+..++.++|+||+||++|+|+ +|+.||...+.......+.... 
T Consensus       140 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~-~g~~pf~~~~~~~~~~~~~~~~~  218 (287)
T cd07848         140 KLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELS-DGQPLFPGESEIDQLFTIQKVLG  218 (287)
T ss_pred             EEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHhhC
Confidence            99999998764332222223346788899999998888999999999999999999 7999998776544332221100 


Q ss_pred             ------------------ccCCC-----------CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ------------------LCWKH-----------SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ------------------~~~~~-----------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                        ...+.           ...++.++.+++.+||+.||++|||++++++|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         219 PLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             CCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                              00000           11357789999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.1e-32  Score=219.89  Aligned_cols=178  Identities=16%  Similarity=0.242  Sum_probs=143.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~~   95 (223)
                      ..+||||+++|+|.++++..+               .+++..+..++.|++.|+.|||+. +++|+||||.||+++.++.
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~  142 (331)
T cd06649          78 ISICMEHMDGGSLDQVLKEAK---------------RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE  142 (331)
T ss_pred             EEEEeecCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCc
Confidence            448899999999999998653               489999999999999999999986 6999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE---  172 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~---  172 (223)
                      ++++|||++......   ......++..|+|||.+.+..++.++|+||+||++|+++ +|+.||......+....+.   
T Consensus       143 ~kl~Dfg~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~-tg~~p~~~~~~~~~~~~~~~~~  218 (331)
T cd06649         143 IKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELA-IGRYPIPPPDAKELEAIFGRPV  218 (331)
T ss_pred             EEEccCccccccccc---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHhcccc
Confidence            999999998654322   123346788999999998888999999999999999999 7999997665443322211   


Q ss_pred             -------------------------------------------hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHH
Q psy15108        173 -------------------------------------------SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI  209 (223)
Q Consensus       173 -------------------------------------------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  209 (223)
                                                                 ...........++.++.+++.+||+.||++||+++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~el  298 (331)
T cd06649         219 VDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKML  298 (331)
T ss_pred             cccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHH
Confidence                                                       1100111112467889999999999999999999999


Q ss_pred             HHHH
Q psy15108        210 VTQL  213 (223)
Q Consensus       210 l~~L  213 (223)
                      +++-
T Consensus       299 l~h~  302 (331)
T cd06649         299 MNHT  302 (331)
T ss_pred             hcCh
Confidence            9874

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG1989|consensus

Probab=100.00  E-value=3.6e-33  Score=233.63  Aligned_cols=185  Identities=16%  Similarity=0.268  Sum_probs=154.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCCCCCeeeecCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~~~nil~~~~~   94 (223)
                      +.+.||||.+|.|-|+|+++..             ..|++.++++|++++++|+.+||...  |+|||||.+|||+..++
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq-------------~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g  183 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQ-------------TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG  183 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHh-------------ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC
Confidence            3478999999999999997755             45999999999999999999999886  99999999999999999


Q ss_pred             CeEEcCCCCCcccchhh-------hh-hhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q psy15108         95 SVKISLSGLSKDTYQKE-------YY-KYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS  163 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~-------~~-~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~  163 (223)
                      ..||||||-+.......       .. ..-...-|+.|++||.+.   +.+.+.|+|||+|||+||.|| +...||.+..
T Consensus       184 ~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLC-y~t~PFe~sg  262 (738)
T KOG1989|consen  184 NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLC-YFTTPFEESG  262 (738)
T ss_pred             CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHH-HhCCCcCcCc
Confidence            99999999775432111       11 112345578899999875   556899999999999999999 8999998764


Q ss_pred             HHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        164 DDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ...    |..+.+..+..+.++..+++||+.||+.+|.+||++-+++..+.++...
T Consensus       263 ~la----Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~  314 (738)
T KOG1989|consen  263 KLA----ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK  314 (738)
T ss_pred             cee----EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence            433    4455677777788999999999999999999999999999999887654

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=2.1e-33  Score=223.33  Aligned_cols=172  Identities=17%  Similarity=0.180  Sum_probs=146.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.||++||.|||+.|++||||||.||+++.++.+
T Consensus        71 ~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~  135 (323)
T cd05575          71 LYFVLDYVNGGELFFHLQRER---------------SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHV  135 (323)
T ss_pred             EEEEEcCCCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcE
Confidence            348899999999999997653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|+|||.+.+..++.++|+|||||++|+|+ +|..||...+..+....+.....
T Consensus       136 kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~  213 (323)
T cd05575         136 VLTDFGLCKEGIEHS-KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEML-YGLPPFYSRDTAEMYDNILNKPL  213 (323)
T ss_pred             EEeccCCCcccccCC-CccccccCChhhcChhhhcCCCCCccccccccchhhhhhh-cCCCCCCCCCHHHHHHHHHcCCC
Confidence            999999886432211 1122345788999999998888999999999999999999 89999998888777777665533


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFP  207 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~  207 (223)
                        ..+...+.++.+++.+||+.||.+||+++
T Consensus       214 --~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         214 --RLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             --CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence              33456789999999999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=3.4e-33  Score=225.82  Aligned_cols=179  Identities=16%  Similarity=0.181  Sum_probs=149.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+++|+|.++++..                .+++..+..++.|++.||.|||+.|++||||||+||+++.++.+
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~----------------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~  181 (370)
T cd05596         118 LYMVMEYMPGGDLVNLMSNY----------------DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL  181 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhc----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCE
Confidence            34899999999999999642                47899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC----CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD----EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~----~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      +++|||++...............+++.|+|||.+...    .++.++|+||+||++|+|+ +|..||...+.......+.
T Consensus       182 kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyell-tG~~Pf~~~~~~~~~~~i~  260 (370)
T cd05596         182 KLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML-VGDTPFYADSLVGTYSKIM  260 (370)
T ss_pred             EEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHH-hCCCCcCCCCHHHHHHHHH
Confidence            9999999875433222222345688999999998643    3778999999999999999 7999999888877777776


Q ss_pred             hCcccC--CCCCCChHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q psy15108        173 SKKLCW--KHSSKTPEYITSLHEKCIHPHPHQ--RPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~--Rps~~~ll~~  212 (223)
                      ......  +....++.++.+++.+|++.+|.+  |++++++++|
T Consensus       261 ~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         261 DHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             cCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            543333  223357899999999999999987  9999999876

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.4e-32  Score=212.91  Aligned_cols=186  Identities=28%  Similarity=0.470  Sum_probs=154.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.+++....              ..+++.+++.++.|++.|+.+||+.+++|+||+|.||+++.++.+
T Consensus        80 ~~lv~e~~~~~~L~~~~~~~~--------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~  145 (267)
T cd05066          80 VMIVTEYMENGSLDAFLRKHD--------------GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVC  145 (267)
T ss_pred             cEEEEEcCCCCCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeE
Confidence            447899999999999997542              358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhh--hhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYYK--YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++..........  ......+..|++||.+.+..++.++|+||||++++++++.|..||......+....+...
T Consensus       146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~  225 (267)
T cd05066         146 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG  225 (267)
T ss_pred             EeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC
Confidence            999999887543322111  111223457999999988889999999999999999885699999888777666666654


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                       ...+.+..++..+.+++.+||+.+|.+||++.++++.|.+++
T Consensus       226 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~  267 (267)
T cd05066         226 -YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKLI  267 (267)
T ss_pred             -CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhhC
Confidence             344555677889999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.2e-33  Score=224.79  Aligned_cols=177  Identities=17%  Similarity=0.263  Sum_probs=149.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||+ .|++||||||.||+++.++.
T Consensus        70 ~~lv~E~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~  134 (325)
T cd05594          70 LCFVMEYANGGELFFHLSRER---------------VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH  134 (325)
T ss_pred             EEEEEeCCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCC
Confidence            338899999999999997543               48999999999999999999997 79999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++++|||++....... .......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||...+.......+....
T Consensus       135 ~kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~-tG~~Pf~~~~~~~~~~~i~~~~  212 (325)
T cd05594         135 IKITDFGLCKEGIKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGRLPFYNQDHEKLFELILMEE  212 (325)
T ss_pred             EEEecCCCCeecCCCC-cccccccCCcccCCHHHHccCCCCCccccccccceeeeec-cCCCCCCCCCHHHHHHHHhcCC
Confidence            9999999886432211 1122345788999999998888999999999999999999 8999998888777766665443


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                      .  ..+...++++.+++.+||+.||++|+     ++.++++|
T Consensus       213 ~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         213 I--RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             C--CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            2  33566789999999999999999996     89999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=6.6e-33  Score=217.14  Aligned_cols=178  Identities=21%  Similarity=0.328  Sum_probs=143.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+. ++|.+++.....             ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++
T Consensus        85 ~lv~e~~~-~~l~~~~~~~~~-------------~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~k  150 (290)
T cd07862          85 TLVFEHVD-QDLTTYLDKVPE-------------PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK  150 (290)
T ss_pred             EEEEccCC-CCHHHHHHhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEE
Confidence            37788886 699999976432             4589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc-
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL-  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~-  176 (223)
                      ++|||++.......  ......++..|+|||.+....++.++|+||+||++|+|+ +|..||.+....+.+..+..... 
T Consensus       151 l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~g~~~f~~~~~~~~~~~i~~~~~~  227 (290)
T cd07862         151 LADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKPLFRGSSDVDQLGKILDVIGL  227 (290)
T ss_pred             EccccceEeccCCc--ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHH-cCCCCcCCCCHHHHHHHHHHHhCC
Confidence            99999986543221  223446788899999998888999999999999999999 89999988776665555432100 


Q ss_pred             ----cC--------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 ----CW--------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ----~~--------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                          .+                    ...+..++.+.+++.+||+.||++||++.++++|
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         228 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             CChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence                00                    0013456778999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.7e-32  Score=212.58  Aligned_cols=189  Identities=23%  Similarity=0.418  Sum_probs=157.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++.....              .+++..+..++.|++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        83 ~~~v~e~~~~g~L~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~  148 (279)
T cd05057          83 VQLITQLMPLGCLLDYVRNHKD--------------NIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHV  148 (279)
T ss_pred             eEEEEecCCCCcHHHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeE
Confidence            4478999999999999986433              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||.+....... .........+..|++||......++.++|+||||++++++++.|..||......+....+... 
T Consensus       149 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-  227 (279)
T cd05057         149 KITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-  227 (279)
T ss_pred             EECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-
Confidence            999999987543221 111112223567999999888888999999999999999994499999988877776666654 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      ...+.+..++..+.+++.+||..+|..||++.++++.|.++..+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05057         228 ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP  272 (279)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence            344555667888999999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=2.3e-32  Score=210.17  Aligned_cols=180  Identities=23%  Similarity=0.314  Sum_probs=151.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++.....             ..+++..++.++.|++.|+.|||+.|++|+|++|+||+++.++.+
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~  140 (256)
T cd08529          74 LNIVMEYAENGDLHKLLKMQRG-------------RPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNV  140 (256)
T ss_pred             EEEEEEeCCCCcHHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCE
Confidence            3488999999999999986532             468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++........ ......++..|++||......++.++|+||||+++++++ +|..||...........+.... 
T Consensus       141 ~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~-  217 (256)
T cd08529         141 KIGDLGVAKLLSDNTN-FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECC-TGKHPFDANNQGALILKIIRGV-  217 (256)
T ss_pred             EEcccccceeccCccc-hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHcCC-
Confidence            9999998875443321 122345677899999998888899999999999999999 7999998887766666655542 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+..++.++.+++.+||+.+|++||++.+++++
T Consensus       218 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         218 FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             CCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            333444678899999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.8e-32  Score=210.90  Aligned_cols=183  Identities=26%  Similarity=0.509  Sum_probs=151.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+++|.+++....              +.++++.+..++.|++.|+.+||+.+++|+||+|.||+++.++.+
T Consensus        74 ~~~v~e~~~~~~L~~~~~~~~--------------~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~  139 (256)
T cd05112          74 ICLVFEFMEHGCLSDYLRAQR--------------GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVV  139 (256)
T ss_pred             eEEEEEcCCCCcHHHHHHhCc--------------cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeE
Confidence            347899999999999997543              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++................+..|++||.+.+..++.++|+||+|+++|++++.|..||...........+... .
T Consensus       140 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~  218 (256)
T cd05112         140 KVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-F  218 (256)
T ss_pred             EECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-C
Confidence            999999886543322222223344567999999988888999999999999999995599999888777777776554 2


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ....+...+..+.+++.+||+.+|++||++.++++.|+
T Consensus       219 ~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         219 RLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             CCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            33334557899999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=3.2e-32  Score=217.50  Aligned_cols=201  Identities=32%  Similarity=0.572  Sum_probs=158.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhcccc-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKD-KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+.+|+|.+++...+....+ ....-..+...+++..++.++.|+++||.|||+.|++|+||+|.||+++.++.
T Consensus        93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~  172 (334)
T cd05100          93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNV  172 (334)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCc
Confidence            34789999999999999875421100 00000112345899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++++|||+++........ .......+..|++||.+....++.++|+||||+++|+|++.|..||.+.+..+....+...
T Consensus       173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  252 (334)
T cd05100         173 MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG  252 (334)
T ss_pred             EEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            999999998654322211 1112233456999999988889999999999999999995589999988877777766554


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                       .....+..++.++.+++.+||+.+|.+||++.+++..|.++..
T Consensus       253 -~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         253 -HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence             3445566778899999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=3.7e-33  Score=222.04  Aligned_cols=173  Identities=15%  Similarity=0.167  Sum_probs=146.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++|||+.+|+|.+++...+               .+++..+..++.||++||.|||+.|++||||||.||+++.++.++
T Consensus        72 ~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~k  136 (325)
T cd05602          72 YFVLDYINGGELFYHLQRER---------------CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIV  136 (325)
T ss_pred             EEEEeCCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEE
Confidence            37899999999999998653               488999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++........ ......++..|+|||.+.+..++.++||||+||++|+|+ +|..||...+..+....+....  
T Consensus       137 l~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~~i~~~~--  212 (325)
T cd05602         137 LTDFGLCKENIEHNG-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML-YGLPPFYSRNTAEMYDNILNKP--  212 (325)
T ss_pred             EccCCCCcccccCCC-CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHh-cCCCCCCCCCHHHHHHHHHhCC--
Confidence            999999864322111 123346788999999998888999999999999999999 8999999888877777766543  


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI  209 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  209 (223)
                      .......+.++.+++.+|++.+|.+|+++.+.
T Consensus       213 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~  244 (325)
T cd05602         213 LQLKPNITNSARHLLEGLLQKDRTKRLGAKDD  244 (325)
T ss_pred             cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence            23345788999999999999999999987643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=2.6e-32  Score=213.62  Aligned_cols=198  Identities=29%  Similarity=0.546  Sum_probs=155.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCC-------CCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCee
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKS-------GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL   89 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil   89 (223)
                      ..+++||+.+|+|.+++...........       .........+++..++.++.|++.||.|||+.+++|+||+|.||+
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil  162 (288)
T cd05050          83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL  162 (288)
T ss_pred             cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence            4588999999999999986532111100       001112346899999999999999999999999999999999999


Q ss_pred             eecCCCeEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy15108         90 ISSDLSVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL  168 (223)
Q Consensus        90 ~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~  168 (223)
                      ++.++.++++|||++........ ........+..|++||.+.+..++.++|+|||||++|+|++.+..||.+....+..
T Consensus       163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~  242 (288)
T cd05050         163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVI  242 (288)
T ss_pred             ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            99999999999998865432221 11122334567999999888889999999999999999996588899888877777


Q ss_pred             HHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ..+.... .+..+..++.++.+++.+||+.+|.+||++.|+++.|++
T Consensus       243 ~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         243 YYVRDGN-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHhcCC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            7666553 333455678999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG2345|consensus

Probab=100.00  E-value=7.6e-33  Score=201.84  Aligned_cols=189  Identities=18%  Similarity=0.293  Sum_probs=152.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCCCCCeeeecCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~~~nil~~~~~   94 (223)
                      .-+++.|+..|||.+.++..+.           ++..+++.+++.++.++++||++||+..  ++|+||||.||++...+
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~-----------kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~  166 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKI-----------KGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSG  166 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhh-----------cCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCC
Confidence            3378999999999999998766           5568999999999999999999999998  99999999999999999


Q ss_pred             CeEEcCCCCCcccc-----hhhh---hhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q psy15108         95 SVKISLSGLSKDTY-----QKEY---YKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS  163 (223)
Q Consensus        95 ~~~l~df~~~~~~~-----~~~~---~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~  163 (223)
                      .+++.|||-+....     +...   ........+..|.|||.+.   +...+.++|||||||++|+|+ ++..||....
T Consensus       167 ~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~m-f~~sPfe~~~  245 (302)
T KOG2345|consen  167 LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMM-FGESPFERIY  245 (302)
T ss_pred             ceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHH-HcCCcchHHh
Confidence            99999999775432     1111   1112335577899999875   334688999999999999999 8999996433


Q ss_pred             HHH--HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        164 DDQ--VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       164 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ...  +.-.+..+...++....+++.+.+++.+|++.||.+||++.+++.++.+++
T Consensus       246 ~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  246 QQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             hcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            211  111233445667777779999999999999999999999999999998765

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=3.7e-32  Score=210.40  Aligned_cols=187  Identities=21%  Similarity=0.286  Sum_probs=150.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.+++.....           ....+++..+..++.|+++|+.|||+.+++|+||+|+||+++.++.+
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~  145 (267)
T cd08228          77 LNIVLELADAGDLSQMIKYFKK-----------QKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVV  145 (267)
T ss_pred             EEEEEEecCCCcHHHHHHHhhh-----------ccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCE
Confidence            4478999999999999975432           22458999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS--DDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~--~~~~~~~~~~~  174 (223)
                      +++|||++........ ......++..|++||.+.+..++.++|+||+|+++|+++ +|..||....  .......+...
T Consensus       146 ~l~d~g~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~-~g~~p~~~~~~~~~~~~~~~~~~  223 (267)
T cd08228         146 KLGDLGLGRFFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA-ALQSPFYGDKMNLFSLCQKIEQC  223 (267)
T ss_pred             EECccccceeccchhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHh-cCCCCCccccccHHHHHHHHhcC
Confidence            9999998875543321 123345777899999998888899999999999999999 7888886543  23444444443


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                      ..........+..+.+++.+||..+|.+||+++++++.++.+
T Consensus       224 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         224 DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            222222345678899999999999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=8.8e-33  Score=219.72  Aligned_cols=171  Identities=19%  Similarity=0.287  Sum_probs=146.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.|++.||.|||+.|++||||||.||+++.++.+
T Consensus        76 ~~lv~Ey~~~g~L~~~i~~~~---------------~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~i  140 (323)
T cd05615          76 LYFVMEYVNGGDLMYHIQQVG---------------KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHI  140 (323)
T ss_pred             EEEEEcCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCE
Confidence            448899999999999997653               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++........ ......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||.+.........+.....
T Consensus       141 kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell-tG~~pf~~~~~~~~~~~i~~~~~  218 (323)
T cd05615         141 KIADFGMCKEHMVDGV-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML-AGQPPFDGEDEDELFQSIMEHNV  218 (323)
T ss_pred             EEeccccccccCCCCc-cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCC
Confidence            9999999864322211 123345788999999998888999999999999999999 79999998888877777766543


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTF  206 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~  206 (223)
                        ..+...+.++.+++.+||+.+|.+|++.
T Consensus       219 --~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         219 --SYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             --CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence              3456678899999999999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1e-32  Score=219.43  Aligned_cols=176  Identities=20%  Similarity=0.300  Sum_probs=148.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|..+++.                ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.+
T Consensus        77 ~~lv~E~~~~~~L~~~~~~----------------~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~  140 (324)
T cd05589          77 VCFVMEYAAGGDLMMHIHT----------------DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFV  140 (324)
T ss_pred             EEEEEcCCCCCcHHHHhhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcE
Confidence            3488999999999988853                258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++........ ......++..|+|||.+.+..++.++|+|||||++|+|+ +|..||.+.+..+....+.....
T Consensus       141 kL~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~G~~pf~~~~~~~~~~~i~~~~~  218 (324)
T cd05589         141 KIADFGLCKEGMGFGD-RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEML-VGESPFPGDDEEEVFDSIVNDEV  218 (324)
T ss_pred             EeCcccCCccCCCCCC-cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCC
Confidence            9999998764322111 123456788999999998888999999999999999999 79999998888777777666533


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                        ..+..++.++.+++.+||+.||.+||     ++.+++++
T Consensus       219 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         219 --RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             --CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence              34566889999999999999999999     56777665

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=2.6e-32  Score=211.56  Aligned_cols=186  Identities=28%  Similarity=0.484  Sum_probs=152.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.++++..+              +.+++.+++.++.|++.|+.|||+.|++|+||+|+||+++.++.+
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~  145 (269)
T cd05065          80 VMIITEFMENGALDSFLRQND--------------GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVC  145 (269)
T ss_pred             eEEEEecCCCCcHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcE
Confidence            447899999999999997643              358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh-hhhc---CCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYY-KYRN---AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-~~~~---~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      +++|||++......... ....   ...+..|++||.+....++.++|+||+|+++||+++.|..||...........+.
T Consensus       146 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~  225 (269)
T cd05065         146 KVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE  225 (269)
T ss_pred             EECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence            99999987643322110 0111   1123469999999888899999999999999998856999998887777666665


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      .. ...+.+..++..+.+++..||+.+|.+||++++++..|++++
T Consensus       226 ~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~  269 (269)
T cd05065         226 QD-YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKMI  269 (269)
T ss_pred             cC-CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence            44 444555678889999999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=4e-32  Score=210.38  Aligned_cols=189  Identities=32%  Similarity=0.574  Sum_probs=152.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC--
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL--   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~--   94 (223)
                      ..+++||+++|+|.+++........        ....+++.+++.++.|++.|+.|||+.+++|+|++|+||+++.++  
T Consensus        74 ~~~v~e~~~~~~L~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~  145 (269)
T cd05044          74 QYIIMELMEGGDLLSYLRDARVERF--------GPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYD  145 (269)
T ss_pred             eEEEEeccCCCcHHHHHHHhhhccc--------CCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCC
Confidence            4488999999999999986533100        123478999999999999999999999999999999999999877  


Q ss_pred             ---CeEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy15108         95 ---SVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ  170 (223)
Q Consensus        95 ---~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~  170 (223)
                         .++++|||++........ ........+..|++||.+.+..++.++|+||||+++|++++.|..||......+....
T Consensus       146 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~  225 (269)
T cd05044         146 ADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQH  225 (269)
T ss_pred             CCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHH
Confidence               799999998865432221 1122334467799999998888999999999999999999559999988777666665


Q ss_pred             HHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      +... .....+...+..+.+++.+||..+|.+||+++++++.|+
T Consensus       226 ~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         226 VTAG-GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             HhcC-CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            5443 333445667899999999999999999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=3.5e-32  Score=221.39  Aligned_cols=166  Identities=31%  Similarity=0.593  Sum_probs=136.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhh-hhhhhcCCccccccccccc
Q psy15108         52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAV  130 (223)
Q Consensus        52 ~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~  130 (223)
                      ..+++..+..++.|++.||.|||+.+++|+||||.||+++..+.++++|||++....... ........++..|++||.+
T Consensus       234 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~  313 (401)
T cd05107         234 PALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESI  313 (401)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHh
Confidence            468899999999999999999999999999999999999999999999999987543221 1112233556789999999


Q ss_pred             ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHH
Q psy15108        131 FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV  210 (223)
Q Consensus       131 ~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  210 (223)
                      ....++.++|+||||++++++++.|..||......+..........+...+..++.++.+++.+||..+|.+||++++++
T Consensus       314 ~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell  393 (401)
T cd05107         314 FNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLV  393 (401)
T ss_pred             cCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            88888999999999999999996588999876655544443333344555667889999999999999999999999999


Q ss_pred             HHHHHHh
Q psy15108        211 TQLSDAM  217 (223)
Q Consensus       211 ~~L~~~~  217 (223)
                      ..|++++
T Consensus       394 ~~L~~~~  400 (401)
T cd05107         394 HLVGDLL  400 (401)
T ss_pred             HHHHHHh
Confidence            9999876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=3.2e-32  Score=209.56  Aligned_cols=179  Identities=19%  Similarity=0.253  Sum_probs=149.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+++++|.++++....             ..+++.++..++.+++.|+.+||+.|++|+||+|+||+++.++.++
T Consensus        76 ~lv~e~~~~~~l~~~l~~~~~-------------~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~  142 (257)
T cd08223          76 YIVMGFCEGGDLYHKLKEQKG-------------KLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIK  142 (257)
T ss_pred             EEEecccCCCcHHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEE
Confidence            378999999999999986433             4589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++....... .......++..|+|||...+..++.++|+||+|+++++++ +|..||...+.......+.... .
T Consensus       143 l~df~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~-~g~~~~~~~~~~~~~~~~~~~~-~  219 (257)
T cd08223         143 VGDLGIARVLENQC-DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMA-TLKHAFNAKDMNSLVYRIIEGK-L  219 (257)
T ss_pred             EecccceEEecccC-CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHH-cCCCCCCCCCHHHHHHHHHhcC-C
Confidence            99999886543221 1123345678899999998888899999999999999999 7889998777666555555442 2


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +..+...++++.+++.+||+.+|++||++.+++.+
T Consensus       220 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         220 PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            33456788999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=3.4e-32  Score=212.45  Aligned_cols=184  Identities=23%  Similarity=0.341  Sum_probs=145.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||+.+|+|.+++...                .+++.+++.++.|++.|+.|||+.+++|+||||.||+++.++.+
T Consensus        83 ~~lv~e~~~~~~l~~~~~~~----------------~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~  146 (283)
T cd05080          83 LQLIMEYVPLGSLRDYLPKH----------------KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLV  146 (283)
T ss_pred             EEEEecCCCCCCHHHHHHHc----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcE
Confidence            34889999999999999642                48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh--hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---------
Q psy15108         97 KISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD---------  165 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~---------  165 (223)
                      +++|||++........  ........+..|++||.+....++.++|+||||+++++|+ +|..||......         
T Consensus       147 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~-tg~~p~~~~~~~~~~~~~~~~  225 (283)
T cd05080         147 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELL-THCDSKQSPPKKFEEMIGPKQ  225 (283)
T ss_pred             EEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHH-hCCCCCCCCcchhhhhhcccc
Confidence            9999999875432211  1112233456689999988888899999999999999999 788887543211         


Q ss_pred             -----HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        166 -----QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       166 -----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                           .............+.+..++.++.+++..||+.+|++||++++++..|+++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         226 GQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             cccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence                 0011111111233345667899999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=6.6e-33  Score=220.97  Aligned_cols=177  Identities=17%  Similarity=0.261  Sum_probs=142.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.|++.||.|||+.|++||||||+||+++.++.+
T Consensus        71 ~~lv~e~~~~g~L~~~~~~~~---------------~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~  135 (329)
T cd05588          71 LFFVIEFVSGGDLMFHMQRQR---------------KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHI  135 (329)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCE
Confidence            348899999999999997653               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--------H-HHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS--------D-DQV  167 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~--------~-~~~  167 (223)
                      +++|||++....... .......++..|+|||.+.+..++.++|+||+||++|+++ +|..||....        . ...
T Consensus       136 kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~-~g~~Pf~~~~~~~~~~~~~~~~~  213 (329)
T cd05588         136 KLTDYGMCKEGIRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM-AGRSPFDIVGMSDNPDQNTEDYL  213 (329)
T ss_pred             EECcCccccccccCC-CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHH-HCCCCcccccccccccccchHHH
Confidence            999999886422111 1123346788999999999888999999999999999999 7999996321        1 122


Q ss_pred             HHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCC------HHHHHHH
Q psy15108        168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT------FPSIVTQ  212 (223)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps------~~~ll~~  212 (223)
                      ...+....  ...+..++.++.+++.+||+.||.+|++      ++++++|
T Consensus       214 ~~~~~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         214 FQVILEKQ--IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             HHHHHcCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence            33333332  3345678889999999999999999997      6777654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=1.9e-32  Score=212.51  Aligned_cols=180  Identities=21%  Similarity=0.289  Sum_probs=146.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+.+|+|.+++...+.             ..+++..+..++.|++.|+.|||+.+++|+|++|.||+++.++.++
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~~-------------~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~  151 (272)
T cd06637          85 WLVMEFCGAGSVTDLIKNTKG-------------NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVK  151 (272)
T ss_pred             EEEEEcCCCCcHHHHHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEE
Confidence            478999999999999986433             4689999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      ++|||++....... .......++..|++||.+.     ...++.++|+||+||++|+++ +|..||...........+.
T Consensus       152 l~Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~-~g~~p~~~~~~~~~~~~~~  229 (272)
T cd06637         152 LVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA-EGAPPLCDMHPMRALFLIP  229 (272)
T ss_pred             EccCCCceeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHH-hCCCCccccCHHHHHHHHh
Confidence            99999986542211 1123345677899999875     335788999999999999999 7999998766655544444


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...........++.++.+++.+||..+|.+||++.+++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         230 RNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             cCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            4333333345678899999999999999999999999864

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG1187|consensus

Probab=100.00  E-value=2.1e-33  Score=224.24  Aligned_cols=200  Identities=22%  Similarity=0.340  Sum_probs=152.9

Q ss_pred             chHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC---c
Q psy15108          2 DLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR---L   78 (223)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i   78 (223)
                      ||++++.+|.++.+...+|+||+++|||.++|+....             .+++|..+++|+.++++||+|||...   |
T Consensus       132 Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~-------------~~L~W~~R~kIa~g~A~gL~yLH~~~~~~i  198 (361)
T KOG1187|consen  132 NLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKG-------------EPLDWETRLKIALGAARGLAYLHEGCPPPI  198 (361)
T ss_pred             CcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCC-------------CCCCHHHHHHHHHHHHHHHHHHccCCCCCE
Confidence            6788888888877667799999999999999986532             16899999999999999999999854   9


Q ss_pred             ccCCCCCCCeeeecCCCeEEcCCCCCcccch-hhhhhhhcC-CcccccccccccccCCCCcccchHHHHHHHHHHHhCCC
Q psy15108         79 IHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRNA-ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGE  156 (223)
Q Consensus        79 ~H~di~~~nil~~~~~~~~l~df~~~~~~~~-~~~~~~~~~-~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~  156 (223)
                      +|||||++|||+|.+...|++|||+++.... ..  ..... .++..|++||.......+.++||||||+++.|++ +|+
T Consensus       199 iHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~--~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllEli-tgr  275 (361)
T KOG1187|consen  199 IHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDT--SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELI-TGR  275 (361)
T ss_pred             ecCCCCHHHeeECCCCCEEccCccCcccCCcccc--ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHH-hCC
Confidence            9999999999999999999999999965433 21  11122 7889999999998888999999999999999999 677


Q ss_pred             CCCCCCC---H---HHH-HHHHHhCccc----CCCC-CCC-----hHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        157 MPFPDLS---D---DQV-LSQLESKKLC----WKHS-SKT-----PEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       157 ~p~~~~~---~---~~~-~~~~~~~~~~----~~~~-~~~-----~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      .+.....   .   ... ...+......    +... ...     -..+..+...|++.+|..||++.++++.|..+.
T Consensus       276 ~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  276 KAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             cccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence            6665322   1   111 1122221111    0000 122     223556778999999999999999999996654

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-33  Score=223.73  Aligned_cols=178  Identities=16%  Similarity=0.221  Sum_probs=147.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.||++||.|||+.|++||||||+||+++.++.+
T Consensus        71 ~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~  135 (330)
T cd05586          71 LYLVTDYMSGGELFWHLQKEG---------------RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHI  135 (330)
T ss_pred             EEEEEcCCCCChHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCE
Confidence            448899999999999997653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .......++..|+|||.+.+. .++.++||||+||++|+|+ +|..||...+..+....+....
T Consensus       136 kl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~ell-tG~~Pf~~~~~~~~~~~i~~~~  213 (330)
T cd05586         136 ALCDFGLSKANLTDN-KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMC-CGWSPFYAEDTQQMYRNIAFGK  213 (330)
T ss_pred             EEecCCcCcCCCCCC-CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEec-cCCCCCCCCCHHHHHHHHHcCC
Confidence            999999986532221 112345678899999998654 4788999999999999999 7999999888877777776654


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCC----CHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRP----TFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rp----s~~~ll~~  212 (223)
                      ...+ ...+++++.+++.+||+.||.+||    ++.++++|
T Consensus       214 ~~~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h  253 (330)
T cd05586         214 VRFP-KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH  253 (330)
T ss_pred             CCCC-CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence            4332 234688899999999999999998    56666654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=2.7e-32  Score=211.17  Aligned_cols=188  Identities=21%  Similarity=0.301  Sum_probs=149.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+++++|.++++....           ....+++..++.++.|++.|+.|||+.|++|+||+|+||+++.++.+
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~  145 (267)
T cd08229          77 LNIVLELADAGDLSRMIKHFKK-----------QKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVV  145 (267)
T ss_pred             EEEEEEecCCCCHHHHHHHhhc-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCE
Confidence            4488999999999999975322           22468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD--DQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~--~~~~~~~~~~  174 (223)
                      +++|||++........ ......++..|++||.+....++.++|+||+|+++|+++ +|..||.....  ......+...
T Consensus       146 ~l~dfg~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~  223 (267)
T cd08229         146 KLGDLGLGRFFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA-ALQSPFYGDKMNLYSLCKKIEQC  223 (267)
T ss_pred             EECcchhhhccccCCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHH-hCCCCcccccchHHHHhhhhhcC
Confidence            9999998765432221 112345677899999998888899999999999999999 79999865433  2333333333


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ..........+..+.+++.+||+.+|++|||+.++++.++++.
T Consensus       224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         224 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            2222223457889999999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.6e-32  Score=214.05  Aligned_cols=181  Identities=19%  Similarity=0.265  Sum_probs=144.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++.....           ....+++..+..++.||++||.|||+.+++|+||+|.||+++.++.+
T Consensus        68 ~~lv~e~~~~g~L~~~~~~~~~-----------~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~  136 (280)
T cd05608          68 LCLVMTIMNGGDLRYHIYNVDE-----------ENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNV  136 (280)
T ss_pred             EEEEEeCCCCCCHHHHHHhccc-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCE
Confidence            3388999999999998864322           23468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD----QVLSQLE  172 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~----~~~~~~~  172 (223)
                      +++|||++........ ......++..|++||.+.+..++.++|+||+|+++|+++ +|..||......    .....+.
T Consensus       137 ~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~-~g~~pf~~~~~~~~~~~~~~~~~  214 (280)
T cd05608         137 RISDLGLAVELKDGQS-KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMI-AARGPFRARGEKVENKELKQRIL  214 (280)
T ss_pred             EEeeCccceecCCCCc-cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHH-hCCCCCCCCCcchhHHHHHHhhc
Confidence            9999999865433221 122346778899999999888999999999999999999 799999765432    2222222


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                      ..  ....+..++..+.+++.+||+.||++||     +++++++|
T Consensus       215 ~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         215 ND--SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             cc--CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence            21  2233456889999999999999999999     66777765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.3e-32  Score=214.31  Aligned_cols=180  Identities=16%  Similarity=0.239  Sum_probs=143.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||+.+|+|.+++...+.             ..+++..+..++.|++.|+.|||+.|++|+||+|.||+++.++.+
T Consensus        68 ~~lv~e~~~g~~L~~~~~~~~~-------------~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~  134 (277)
T cd05607          68 LCLVMSLMNGGDLKYHIYNVGE-------------RGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNC  134 (277)
T ss_pred             EEEEEecCCCCCHHHHHHhccc-------------cCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCE
Confidence            4488999999999999976543             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD----QVLSQLE  172 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~----~~~~~~~  172 (223)
                      +++|||++.......  ......++..|+|||.+.+..++.++|+||+||++|+++ +|..||......    .......
T Consensus       135 ~l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~-~g~~p~~~~~~~~~~~~~~~~~~  211 (277)
T cd05607         135 RLSDLGLAVELKDGK--TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMV-AGRTPFKDHKEKVAKEELKRRTL  211 (277)
T ss_pred             EEeeceeeeecCCCc--eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHH-hCCCCCCCCcchhhHHHHHHHhh
Confidence            999999886543321  112345778899999998888999999999999999999 799999765332    2222222


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      ..... .....++.++.+++.+||+.||++||+++|+++.+
T Consensus       212 ~~~~~-~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~  251 (277)
T cd05607         212 EDEVK-FEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP  251 (277)
T ss_pred             ccccc-cccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence            22111 11245788999999999999999999997665443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=6.9e-32  Score=208.61  Aligned_cols=175  Identities=22%  Similarity=0.385  Sum_probs=139.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC-
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~-   95 (223)
                      ..+++||+.+|+|..++....              ..+++..++.++.||++|+.|||+.+++|+||+|.||+++.++. 
T Consensus        79 ~~lv~e~~~~~~l~~~~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~  144 (262)
T cd05077          79 NIMVEEFVEFGPLDLFMHRKS--------------DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGID  144 (262)
T ss_pred             CEEEEecccCCCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCcc
Confidence            448899999999999987533              35899999999999999999999999999999999999986654 


Q ss_pred             ------eEEcCCCCCcccchhhhhhhhcCCcccccccccccc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy15108         96 ------VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL  168 (223)
Q Consensus        96 ------~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~  168 (223)
                            ++++|||++......     ....++..|+|||.+. ...++.++||||||+++|++++.+..||......+..
T Consensus       145 ~~~~~~~~l~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~  219 (262)
T cd05077         145 GECGPFIKLSDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE  219 (262)
T ss_pred             CCCCceeEeCCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH
Confidence                  899999988644322     2344567799999886 4568889999999999999986788888766544432


Q ss_pred             HHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      . +.....  ......++++.+++.+||+.||.+||++.++++++
T Consensus       220 ~-~~~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         220 R-FYEGQC--MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             H-HHhcCc--cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            2 222211  22334567899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG0600|consensus

Probab=100.00  E-value=6.2e-33  Score=219.75  Aligned_cols=178  Identities=21%  Similarity=0.289  Sum_probs=146.6

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|+||+++ ||.-++..-+              -.|++.++..++.|++.||+|||++|++|||||.+|||++.+|.+||
T Consensus       195 lVFeYMdh-DL~GLl~~p~--------------vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKi  259 (560)
T KOG0600|consen  195 LVFEYMDH-DLSGLLSSPG--------------VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKI  259 (560)
T ss_pred             EEEecccc-hhhhhhcCCC--------------cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEe
Confidence            77777765 7888886533              37999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh---C
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES---K  174 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~---~  174 (223)
                      .|||+++.............+.|.+|.|||.+.+. .|+..+|+||.|||+.||+ .|+..|.+....+.++.|..   .
T Consensus       260 aDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~-~gkPI~~G~tEveQl~kIfklcGS  338 (560)
T KOG0600|consen  260 ADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELF-LGKPILQGRTEVEQLHKIFKLCGS  338 (560)
T ss_pred             ccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHH-cCCCCcCCccHHHHHHHHHHHhCC
Confidence            99999997666655556778899999999999875 4999999999999999999 89999998877665555432   0


Q ss_pred             c--ccCC----------------------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 K--LCWK----------------------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~--~~~~----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .  ..|+                      ....++....+|+..+|..||.+|.|+.++++.
T Consensus       339 P~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  339 PTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS  400 (560)
T ss_pred             CChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence            0  0011                      013346778899999999999999999988754

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.1e-31  Score=207.98  Aligned_cols=186  Identities=27%  Similarity=0.442  Sum_probs=144.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++++...           ....+++..+..++.||++||.|||+.+++|+||||.||+++.++.+
T Consensus        70 ~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~  138 (268)
T cd05086          70 YLLVFEYCELGDLKSYLSQEQW-----------HRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTV  138 (268)
T ss_pred             cEEEEecCCCCcHHHHHHhhhc-----------ccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccE
Confidence            4489999999999999986533           12346788889999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh-hhhhcCCccccccccccccc-------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy15108         97 KISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFD-------DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL  168 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~-------~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~  168 (223)
                      +++|||++........ .......++..|++||.+..       ..++.++|+||||+++|+|++.+..||......+..
T Consensus       139 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~  218 (268)
T cd05086         139 KVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVL  218 (268)
T ss_pred             EecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            9999998754322211 11223456778999998743       235678999999999999997778899877776666


Q ss_pred             HHHHhCc-c---cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        169 SQLESKK-L---CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       169 ~~~~~~~-~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ..+.... .   .+......++.+.+++..|| .+|++||+++++++.|+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         219 NHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            6543321 1   22233456788999999999 67999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.7e-32  Score=219.28  Aligned_cols=178  Identities=19%  Similarity=0.278  Sum_probs=138.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+. ++|.+++...+               .+++..+..++.||++||.|||+.|++||||||+||+++.++.++
T Consensus        80 ~lv~e~~~-~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~k  143 (338)
T cd07859          80 YVVFELME-SDLHQVIKAND---------------DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLK  143 (338)
T ss_pred             EEEEecCC-CCHHHHHHhcc---------------cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEE
Confidence            47889984 79999997643               489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh--hhhhhcCCccccccccccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         98 ISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        98 l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      ++|||++.......  ........++..|+|||.+.+  ..++.++||||+||++|+|+ +|+.||.+.+.......+..
T Consensus       144 L~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~-tg~~pf~~~~~~~~~~~~~~  222 (338)
T cd07859         144 ICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVL-TGKPLFPGKNVVHQLDLITD  222 (338)
T ss_pred             EccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHH-cCCCCCCCCChHHHHHHHHH
Confidence            99999987543221  111233567889999999765  56888999999999999999 79999976654322211100


Q ss_pred             --------------------------CcccC---CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 --------------------------KKLCW---KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 --------------------------~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                                .....   ......++.+.+++.+||+.||++||++++++++
T Consensus       223 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         223 LLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence                                      00000   0112456778999999999999999999999976

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2e-32  Score=220.91  Aligned_cols=180  Identities=17%  Similarity=0.203  Sum_probs=145.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.|++.||.|||+.|++||||||+||+++.++.+
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~v  140 (363)
T cd05628          76 LYLIMEFLPGGDMMTLLMKKD---------------TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHV  140 (363)
T ss_pred             EEEEEcCCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCE
Confidence            448999999999999998653               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh----------------------------------hhhhcCCcccccccccccccCCCCcccchH
Q psy15108         97 KISLSGLSKDTYQKEY----------------------------------YKYRNAILPLRWLPYEAVFDDEFSTKSDVY  142 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~  142 (223)
                      +++|||++........                                  .......+++.|+|||.+.+..++.++|+|
T Consensus       141 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~Dvw  220 (363)
T cd05628         141 KLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWW  220 (363)
T ss_pred             EEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhh
Confidence            9999999864321100                                  001134688999999999888899999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc--CCCCCCChHHHHHHHHHhcC--CCCCCCCCHHHHHHH
Q psy15108        143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC--WKHSSKTPEYITSLHEKCIH--PHPHQRPTFPSIVTQ  212 (223)
Q Consensus       143 slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~--~dp~~Rps~~~ll~~  212 (223)
                      |+||++|+|+ +|..||.+....+....+......  .+.....++++++++.+++.  .++..||+++++++|
T Consensus       221 SlGvil~ell-~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         221 SLGVIMYEML-IGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             hhHHHHHHHH-hCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence            9999999999 799999988888877777653222  22223467889999988654  233356899999876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=4.1e-32  Score=216.70  Aligned_cols=177  Identities=17%  Similarity=0.237  Sum_probs=140.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~~   95 (223)
                      ..+|+||+.+|+|.++++..+               .+++..+..++.+++.|+.|||+. +++|+||||+||+++.++.
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~  142 (333)
T cd06650          78 ISICMEHMDGGSLDQVLKKAG---------------RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE  142 (333)
T ss_pred             EEEEEecCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCC
Confidence            448899999999999998653               389999999999999999999975 7999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL----  171 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~----  171 (223)
                      ++++|||++......   ......++..|+|||.+.+..++.++|+||+||++|+++ +|..||...........+    
T Consensus       143 ~kL~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~  218 (333)
T cd06650         143 IKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA-IGRYPIPPPDAKELELMFGCPV  218 (333)
T ss_pred             EEEeeCCcchhhhhh---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCcchhHHHHHhcCcc
Confidence            999999988644221   123345778899999998888999999999999999999 799999765443322111    


Q ss_pred             ----------------------------------------HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHH
Q psy15108        172 ----------------------------------------ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVT  211 (223)
Q Consensus       172 ----------------------------------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  211 (223)
                                                              .............+.++++++.+||+.||++||++++++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         219 EGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             cCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence                                                    1110011111235678999999999999999999999987


Q ss_pred             H
Q psy15108        212 Q  212 (223)
Q Consensus       212 ~  212 (223)
                      +
T Consensus       299 h  299 (333)
T cd06650         299 H  299 (333)
T ss_pred             C
Confidence            6

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.4e-33  Score=221.62  Aligned_cols=173  Identities=19%  Similarity=0.239  Sum_probs=146.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++....               .+++..+..++.||++||.|||+.+++||||||.||+++.++.+
T Consensus        73 ~~lv~e~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  137 (318)
T cd05582          73 LYLILDFLRGGDLFTRLSKEV---------------MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHI  137 (318)
T ss_pred             EEEEEcCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcE
Confidence            348899999999999997543               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|++||.+....++.++|+|||||++|+|+ +|..||......+....+.....
T Consensus       138 kL~Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~-tg~~p~~~~~~~~~~~~i~~~~~  215 (318)
T cd05582         138 KLTDFGLSKESIDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML-TGSLPFQGKDRKETMTMILKAKL  215 (318)
T ss_pred             EEeeccCCcccCCCC-CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeec-cCCCCCCCCCHHHHHHHHHcCCC
Confidence            999999986543221 1122345788899999998888899999999999999999 79999998888777777665432


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPS  208 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  208 (223)
                        ..+..+++.+.+++.+||+.||.+||++.+
T Consensus       216 --~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         216 --GMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             --CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence              345667899999999999999999999433

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=9.3e-32  Score=206.83  Aligned_cols=183  Identities=39%  Similarity=0.688  Sum_probs=153.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+++++|.++++....             ..+++..+..++.|++.|+.+||+.+++|+||+|.||+++.++.+
T Consensus        76 ~~~i~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~  142 (258)
T smart00219       76 LMIVMEYMEGGDLLDYLRKNRP-------------KELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVV  142 (258)
T ss_pred             eEEEEeccCCCCHHHHHHhhhh-------------ccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeE
Confidence            4588999999999999986543             228999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|++||......++.++|+|++|++++++++.|..||...........+... .
T Consensus       143 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~  221 (258)
T smart00219      143 KISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG-Y  221 (258)
T ss_pred             EEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-C
Confidence            999999987654432222112335678999999877888999999999999999996689999888777777776665 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      ....+...+.++.+++.+|+..+|++|||+.++++.|
T Consensus       222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            3444566889999999999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.4e-32  Score=218.41  Aligned_cols=172  Identities=17%  Similarity=0.159  Sum_probs=145.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+.+...+               .+++..+..++.||++||.|||+.+++||||||.||+++.++.+
T Consensus        71 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~  135 (321)
T cd05603          71 LYFVLDYVNGGELFFHLQRER---------------CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHV  135 (321)
T ss_pred             EEEEEcCCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCE
Confidence            348899999999999987543               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++........ ......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||...+.......+.... 
T Consensus       136 kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~~i~~~~-  212 (321)
T cd05603         136 VLTDFGLCKEGVEPEE-TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEML-YGLPPFYSRDVSQMYDNILHKP-  212 (321)
T ss_pred             EEccCCCCccCCCCCC-ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhh-cCCCCCCCCCHHHHHHHHhcCC-
Confidence            9999998864322211 123345788899999998888999999999999999999 8999999888777777666543 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFP  207 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~  207 (223)
                       ...+...+.++.+++.+||+.+|.+||+..
T Consensus       213 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         213 -LQLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             -CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence             334556788899999999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=5e-32  Score=212.67  Aligned_cols=194  Identities=32%  Similarity=0.550  Sum_probs=151.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.+++..........    ......+++..++.++.|++.||.|||+.+++|+||||.||+++.++.+
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~  169 (296)
T cd05051          94 LCMIMEYMENGDLNQFLQKHVAETSGL----ACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTI  169 (296)
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccc----cccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCce
Confidence            457899999999999998754211110    1122468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN-KGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~-~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++......... ......++..|++||.+....++.++|+||||+++|++++ .+..||........+..+...
T Consensus       170 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~  249 (296)
T cd05051         170 KIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHF  249 (296)
T ss_pred             EEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhc
Confidence            99999998754332211 1223345678999999888888999999999999999984 267788877766665554332


Q ss_pred             ------cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        175 ------KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       175 ------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                            ......+..++.++.+++.+||+.+|.+||++.++++.|+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         250 FRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             cccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence                  1122334456789999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=2.9e-32  Score=212.69  Aligned_cols=180  Identities=18%  Similarity=0.261  Sum_probs=144.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++|||+.+|+|.+++.....             ..+++..++.++.|+++|+.|||+.+++|+|++|.||+++.++.++
T Consensus        95 ~iv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~  161 (282)
T cd06636          95 WLVMEFCGAGSVTDLVKNTKG-------------NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVK  161 (282)
T ss_pred             EEEEEeCCCCcHHHHHHHccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence            488999999999999986543             4588999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      ++|||++....... .......++..|+|||.+.     ...++.++|+||+|+++|+++ +|..||...........+.
T Consensus       162 l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~-~g~~p~~~~~~~~~~~~~~  239 (282)
T cd06636         162 LVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMA-EGAPPLCDMHPMRALFLIP  239 (282)
T ss_pred             EeeCcchhhhhccc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHH-hCCCCccccCHHhhhhhHh
Confidence            99999876432211 1123345677899999875     345778999999999999999 7999998776655444443


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...........++.++.+++.+||+.||.+||++.+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         240 RNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             hCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence            3322222334578899999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=3.6e-32  Score=209.15  Aligned_cols=180  Identities=20%  Similarity=0.279  Sum_probs=150.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+++|+|.+++.....             ..++++.++.++.|+++|+.+||+.|++|+||+|.||+++.++.+
T Consensus        73 ~~lv~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~  139 (255)
T cd08219          73 LYIVMEYCDGGDLMQKIKLQRG-------------KLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKV  139 (255)
T ss_pred             EEEEEeeCCCCcHHHHHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcE
Confidence            3488999999999999976433             458999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+........ ......++..|++||.+.+..++.++|+||+|+++|+|+ +|..||...+.......+.....
T Consensus       140 ~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~-~g~~p~~~~~~~~~~~~~~~~~~  217 (255)
T cd08219         140 KLGDFGSARLLTSPGA-YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELC-TLKHPFQANSWKNLILKVCQGSY  217 (255)
T ss_pred             EEcccCcceeeccccc-ccccccCCccccCHHHHccCCcCchhhhhhhchhheehh-hccCCCCCCCHHHHHHHHhcCCC
Confidence            9999998865432221 112345677899999998888899999999999999999 79999998877776666655533


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       .+.+..++..+.+++.+||+.+|++||++++++..
T Consensus       218 -~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         218 -KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             -CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence             33456678889999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.6e-32  Score=218.55  Aligned_cols=177  Identities=16%  Similarity=0.230  Sum_probs=142.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.||+.|+.|||+.|++||||||+||+++.++.+
T Consensus        71 ~~lv~e~~~~~~L~~~~~~~~---------------~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~  135 (327)
T cd05617          71 LFLVIEYVNGGDLMFHMQRQR---------------KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHI  135 (327)
T ss_pred             EEEEEeCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCE
Confidence            348899999999999997653               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC------CHH-HHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL------SDD-QVLS  169 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~------~~~-~~~~  169 (223)
                      +++|||++....... .......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||...      ... ....
T Consensus       136 kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell-~g~~pf~~~~~~~~~~~~~~~~~  213 (327)
T cd05617         136 KLTDYGMCKEGLGPG-DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMM-AGRSPFDIITDNPDMNTEDYLFQ  213 (327)
T ss_pred             EEeccccceeccCCC-CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHH-hCCCCCCccCCCcccccHHHHHH
Confidence            999999886422111 1123356788999999998888999999999999999999 799999532      112 2223


Q ss_pred             HHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q psy15108        170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF------PSIVTQ  212 (223)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~------~~ll~~  212 (223)
                      .+...  ....+...+..+.+++.+||+.||.+|+++      ++++.|
T Consensus       214 ~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  260 (327)
T cd05617         214 VILEK--PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH  260 (327)
T ss_pred             HHHhC--CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence            33332  233456678899999999999999999984      566654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.7e-32  Score=221.59  Aligned_cols=179  Identities=16%  Similarity=0.183  Sum_probs=147.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...                .+++..+..++.||+.||.|||+.+++||||||+||+++.++.+
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~----------------~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~  181 (370)
T cd05621         118 LYMVMEYMPGGDLVNLMSNY----------------DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHL  181 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhc----------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCE
Confidence            44899999999999999642                47899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCC----CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE----FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~----~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      +++|||++...............+++.|+|||.+....    ++.++|+||+||++|+|+ +|..||...+.......+.
T Consensus       182 kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell-~G~~Pf~~~~~~~~~~~i~  260 (370)
T cd05621         182 KLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML-VGDTPFYADSLVGTYSKIM  260 (370)
T ss_pred             EEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHH-hCCCCCCCCCHHHHHHHHH
Confidence            99999998765333222223456889999999986543    678999999999999999 7999999888877777776


Q ss_pred             hCcccC--CCCCCChHHHHHHHHHhcCCCCC--CCCCHHHHHHH
Q psy15108        173 SKKLCW--KHSSKTPEYITSLHEKCIHPHPH--QRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~--~~~~~~~~~~~~li~~~l~~dp~--~Rps~~~ll~~  212 (223)
                      ......  +.....+..+++++..|+..++.  .|++++++++|
T Consensus       261 ~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         261 DHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             hCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            543333  22335688899999999985554  38899999887

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-32  Score=221.79  Aligned_cols=179  Identities=14%  Similarity=0.186  Sum_probs=147.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.|++.||.|||+.|++||||||.||+++.++.+
T Consensus        76 ~~lv~E~~~~g~L~~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~  140 (364)
T cd05599          76 LYLIMEYLPGGDMMTLLMKKD---------------TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHI  140 (364)
T ss_pred             EEEEECCCCCcHHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCE
Confidence            448899999999999998643               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh-------------------------------------hhhcCCcccccccccccccCCCCccc
Q psy15108         97 KISLSGLSKDTYQKEYY-------------------------------------KYRNAILPLRWLPYEAVFDDEFSTKS  139 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~  139 (223)
                      +++|||++.........                                     ......+++.|+|||.+....++.++
T Consensus       141 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  220 (364)
T cd05599         141 KLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKEC  220 (364)
T ss_pred             EEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCee
Confidence            99999988643211000                                     00123578899999999888899999


Q ss_pred             chHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCC--CCCChHHHHHHHHHhcCCCCCCCCC---HHHHHHH
Q psy15108        140 DVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH--SSKTPEYITSLHEKCIHPHPHQRPT---FPSIVTQ  212 (223)
Q Consensus       140 Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps---~~~ll~~  212 (223)
                      |+||+||++|+|+ +|..||...+..+....+.........  ...+++++++++.+|+. +|.+|++   +++++.|
T Consensus       221 DiwSlG~il~el~-~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         221 DWWSLGVIMYEML-VGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             eeecchhHHHHhh-cCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            9999999999999 899999988887776666543332222  23568899999999997 9999998   8888765

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.5e-32  Score=218.85  Aligned_cols=177  Identities=18%  Similarity=0.256  Sum_probs=141.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.|++.||.|||+.+++||||||+||+++.++.+
T Consensus        71 ~~lv~E~~~~~~L~~~~~~~~---------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~  135 (329)
T cd05618          71 LFFVIEYVNGGDLMFHMQRQR---------------KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHI  135 (329)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCE
Confidence            348899999999999987643               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---------HHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS---------DDQV  167 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~---------~~~~  167 (223)
                      +++|||++....... .......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||....         ....
T Consensus       136 kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~g~~Pf~~~~~~~~~~~~~~~~~  213 (329)
T cd05618         136 KLTDYGMCKEGLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM-AGRSPFDIVGSSDNPDQNTEDYL  213 (329)
T ss_pred             EEeeCCccccccCCC-CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHh-hCCCCCccCCCcCCcccccHHHH
Confidence            999999986432111 1123346788999999999888999999999999999999 7999995211         1122


Q ss_pred             HHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCC------HHHHHHH
Q psy15108        168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT------FPSIVTQ  212 (223)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps------~~~ll~~  212 (223)
                      ...+...  ....+...+..+.+++.+||+.||++||+      +.++++|
T Consensus       214 ~~~i~~~--~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         214 FQVILEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             HHHHhcC--CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence            2223332  23345677889999999999999999998      4676655

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=2.4e-32  Score=213.66  Aligned_cols=180  Identities=21%  Similarity=0.301  Sum_probs=146.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||+++|+|.+++.....             ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.+
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~  141 (285)
T cd05605          75 LCLVLTLMNGGDLKFHIYNMGN-------------PGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHI  141 (285)
T ss_pred             EEEEEeccCCCcHHHHHHhcCc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCE
Confidence            4488999999999999975432             468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC--
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK--  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~--  174 (223)
                      +++|||++.......  ......++..|++||.+.+..++.++|+||+|+++|+++ +|..||.+.......+.+...  
T Consensus       142 ~l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~-~g~~pf~~~~~~~~~~~~~~~~~  218 (285)
T cd05605         142 RISDLGLAVEIPEGE--TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMI-EGKSPFRQRKEKVKREEVERRVK  218 (285)
T ss_pred             EEeeCCCceecCCCC--ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHH-HCCCCCCCCchhhHHHHHHHHhh
Confidence            999999986543221  112346778899999998888999999999999999999 799999876554333332221  


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                      ......+...+..+.+++.+||+.||.+||     ++++++++
T Consensus       219 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         219 EDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             hcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            122233456788999999999999999999     88888765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0580|consensus

Probab=99.98  E-value=2.6e-32  Score=198.04  Aligned_cols=189  Identities=23%  Similarity=0.252  Sum_probs=166.3

Q ss_pred             HHHHHhhc--CCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCC
Q psy15108          5 QFLLATRK--DSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKD   82 (223)
Q Consensus         5 ~~~~~~~~--~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~d   82 (223)
                      ||++-+..  ++...-+++||..+|+|+..|...+.             ..+++.....++.|++.|+.|+|..+++|||
T Consensus        83 nilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~-------------~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRd  149 (281)
T KOG0580|consen   83 NILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRM-------------KRFDEQRAATYIKQLANALLYCHLKRVIHRD  149 (281)
T ss_pred             cHHhhhhheeccceeEEEEEecCCchHHHHHHhccc-------------ccccccchhHHHHHHHHHHHHhccCCcccCC
Confidence            46666665  44445589999999999999985443             5699999999999999999999999999999


Q ss_pred             CCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Q psy15108         83 IAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL  162 (223)
Q Consensus        83 i~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~  162 (223)
                      |||.|+|++..+.+|+.|||++.....+   ...+..+|..|++||...+..++..+|+|++|++.||++ .|..||...
T Consensus       150 iKpenlLlg~~~~lkiAdfGwsV~~p~~---kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yefl-vg~ppFes~  225 (281)
T KOG0580|consen  150 IKPENLLLGSAGELKIADFGWSVHAPSN---KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFL-VGLPPFESQ  225 (281)
T ss_pred             CCHHHhccCCCCCeeccCCCceeecCCC---CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHH-hcCCchhhh
Confidence            9999999999999999999999765432   345678999999999999999999999999999999999 899999999


Q ss_pred             CHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        163 SDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+++..+.+-....  +..++.++.++|.+|+..+|.+|....|+++|
T Consensus       226 ~~~etYkrI~k~~~~~--p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  226 SHSETYKRIRKVDLKF--PSTISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             hhHHHHHHHHHccccC--CcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            9999999887754443  47789999999999999999999999999876

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.98  E-value=4.8e-32  Score=208.69  Aligned_cols=175  Identities=21%  Similarity=0.348  Sum_probs=141.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC--
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL--   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~--   94 (223)
                      ..+++||+.+|+|.+++...+.              .+++..++.++.||+.||.|||+.+++|+||||.||+++..+  
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~  140 (259)
T cd05037          75 NIMVEEYVKFGPLDVFLHREKN--------------NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLN  140 (259)
T ss_pred             cEEEEEcCCCCcHHHHHHhhcc--------------CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccc
Confidence            4578999999999999986542              589999999999999999999999999999999999999887  


Q ss_pred             -----CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy15108         95 -----SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD--EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV  167 (223)
Q Consensus        95 -----~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~  167 (223)
                           .++++|||++.....     .....++..|++||.+...  .++.++|+||+|++++++++.+..||......+.
T Consensus       141 ~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~  215 (259)
T cd05037         141 EGYVPFIKLSDPGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK  215 (259)
T ss_pred             cCCceeEEeCCCCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH
Confidence                 799999999875433     1223455679999998766  6888999999999999999557888877754443


Q ss_pred             HHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      ....... ...  +......+.+++.+||..+|.+||++.++++.|
T Consensus       216 ~~~~~~~-~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         216 ERFYQDQ-HRL--PMPDCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             HHHHhcC-CCC--CCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            3333322 111  222237789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0660|consensus

Probab=99.98  E-value=1.2e-32  Score=210.47  Aligned_cols=177  Identities=20%  Similarity=0.249  Sum_probs=141.4

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|+|.+ +.+|.+.|++...               ++++.+..+++||+.||+|+|+.+++|||+||.|++++.+..+|+
T Consensus       103 iV~elM-etDL~~iik~~~~---------------L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI  166 (359)
T KOG0660|consen  103 LVFELM-ETDLHQIIKSQQD---------------LTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKI  166 (359)
T ss_pred             EehhHH-hhHHHHHHHcCcc---------------ccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEe
Confidence            555555 8899999987543               999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhh-hhhcCCcccccccccccc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh---
Q psy15108         99 SLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVF-DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES---  173 (223)
Q Consensus        99 ~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~-~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~---  173 (223)
                      +|||+|+........ .....+.|.+|.|||.+. ...|+...||||+|||+.||+ +|+.-|++.+...-+..+..   
T Consensus       167 ~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL-~gkplFpG~d~v~Ql~lI~~~lG  245 (359)
T KOG0660|consen  167 CDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEML-TGKPLFPGKDYVHQLQLILELLG  245 (359)
T ss_pred             ccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHH-cCCCCCCCCchHHHHHHHHHhcC
Confidence            999999876432111 124567899999999975 456999999999999999999 89988887765433322211   


Q ss_pred             ---------------------CcccCC-----CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 ---------------------KKLCWK-----HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ---------------------~~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                           -...+.     ..+..++...+++.+||..||.+|+|++|.++|
T Consensus       246 tP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  246 TPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             CCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence                                 101111     114566888999999999999999999999977

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.98  E-value=9.3e-32  Score=206.35  Aligned_cols=183  Identities=30%  Similarity=0.512  Sum_probs=150.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+++|.+++....              ..+++..+..++.+++.|+.|||+++++|+||+|+||+++.++.+
T Consensus        67 ~~~v~e~~~~~~l~~~l~~~~--------------~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~  132 (251)
T cd05041          67 IYIVMELVPGGSLLTFLRKKK--------------NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVL  132 (251)
T ss_pred             eEEEEEcCCCCcHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcE
Confidence            347899999999999997643              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhh-hhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++.......... ......+..|++||.+.+..++.++|+||+|++++++++.+..||...........+... 
T Consensus       133 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-  211 (251)
T cd05041         133 KISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-  211 (251)
T ss_pred             EEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-
Confidence            999999886543211111 112233566999999888888999999999999999995588999887776666555543 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      .....+...+.++.+++.+||..+|.+||++.++++.|.
T Consensus       212 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         212 YRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            334445677899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.98  E-value=1.2e-31  Score=207.34  Aligned_cols=188  Identities=21%  Similarity=0.315  Sum_probs=149.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.+++.....           ....+++.+++.++.++++|+.|||+.|++|+||+|+||+++.++.+
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~  145 (267)
T cd08224          77 LNIVLELADAGDLSRMIKHFKK-----------QKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVV  145 (267)
T ss_pred             EEEEEecCCCCCHHHHHHHhcc-----------cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcE
Confidence            4478999999999999975422           23468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS--DDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~--~~~~~~~~~~~  174 (223)
                      +++|||++........ ......++..|.+||.+.+..++.++|+||+|+++|+++ +|..||....  .......+...
T Consensus       146 ~l~d~~~~~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~  223 (267)
T cd08224         146 KLGDLGLGRFFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA-ALQSPFYGDKMNLYSLCKKIEKC  223 (267)
T ss_pred             EEeccceeeeccCCCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHH-HCCCCcccCCccHHHHHhhhhcC
Confidence            9999998864432211 112235677799999998888999999999999999999 7888986443  23334444443


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ..........+..+.+++.+||..+|++||++.++++.|+.+.
T Consensus       224 ~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         224 DYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             CCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            2222222367788999999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.98  E-value=2.9e-32  Score=224.74  Aligned_cols=179  Identities=17%  Similarity=0.206  Sum_probs=139.3

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC-CeE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-SVK   97 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~-~~~   97 (223)
                      +||||+. ++|.+++.....           ....+++..+..++.||+.||.|||+.+++||||||+||+++.++ .++
T Consensus       144 lvmE~~~-~~l~~~~~~~~~-----------~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vk  211 (440)
T PTZ00036        144 VVMEFIP-QTVHKYMKHYAR-----------NNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLK  211 (440)
T ss_pred             EEEecCC-ccHHHHHHHHhh-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCcee
Confidence            6888887 578888765322           234689999999999999999999999999999999999998665 699


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc-
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK-  175 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~-  175 (223)
                      |+|||++.......  ......+++.|+|||.+.+. .++.++||||+||++|+|+ +|..||.+......+..+.... 
T Consensus       212 L~DFGla~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell-tG~~pf~~~~~~~~~~~i~~~~~  288 (440)
T PTZ00036        212 LCDFGSAKNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMI-LGYPIFSGQSSVDQLVRIIQVLG  288 (440)
T ss_pred             eeccccchhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhC
Confidence            99999997543221  11234568889999997654 5889999999999999999 7999998876554443332200 


Q ss_pred             --------------------------ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 --------------------------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 --------------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                                .....+...++++.+++.+||+.||.+|||+.++++|
T Consensus       289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence                                      0011123467889999999999999999999999866

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.98  E-value=1.4e-31  Score=208.20  Aligned_cols=176  Identities=23%  Similarity=0.374  Sum_probs=139.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC--
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL--   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~--   94 (223)
                      ..+||||+++|+|..++....              +.+++..++.++.|+++||.|||+++++||||||+||+++..+  
T Consensus        91 ~~lv~ey~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~  156 (274)
T cd05076          91 NIMVEEFVEHGPLDVCLRKEK--------------GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLA  156 (274)
T ss_pred             eEEEEecCCCCcHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcc
Confidence            348899999999999997532              3589999999999999999999999999999999999997643  


Q ss_pred             -----CeEEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy15108         95 -----SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL  168 (223)
Q Consensus        95 -----~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~  168 (223)
                           .++++|||++......     ....++..|++||.+.. ..++.++|+||||+++|++++.|..||......+..
T Consensus       157 ~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~  231 (274)
T cd05076         157 EGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE  231 (274)
T ss_pred             cCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH
Confidence                 3799999987543221     22345677999998765 457899999999999999975799999877655443


Q ss_pred             HHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ...... .  ..+...+..+.+++.+||+.+|++||+++++++.|+
T Consensus       232 ~~~~~~-~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         232 RFYEKK-H--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HHHHhc-c--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            332222 1  223334567999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.98  E-value=4.4e-32  Score=211.98  Aligned_cols=185  Identities=22%  Similarity=0.357  Sum_probs=143.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++....              ..+++..+..++.|++.||.|||++|++|+||+|.||+++.++.+
T Consensus        83 ~~lv~e~~~g~~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~  148 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPRNK--------------NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQV  148 (284)
T ss_pred             eEEEEEccCCCCHHHHHHhcc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCE
Confidence            458999999999999997543              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh--hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC------------
Q psy15108         97 KISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL------------  162 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~------------  162 (223)
                      +++|||++........  .......++..|++||.+.+..++.++|+||||+++|+++ ++..|....            
T Consensus       149 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ell-t~~~~~~~~~~~~~~~~~~~~  227 (284)
T cd05079         149 KIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELL-TYCDSESSPMTLFLKMIGPTH  227 (284)
T ss_pred             EECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhh-cCCCCCccccchhhhhccccc
Confidence            9999999875433221  1112334566799999988888899999999999999999 454433211            


Q ss_pred             ---CHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        163 ---SDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       163 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                         ........+... ...+.+..++..+.+++.+||+.+|++||+++++++.++.++
T Consensus       228 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~  284 (284)
T cd05079         228 GQMTVTRLVRVLEEG-KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL  284 (284)
T ss_pred             ccccHHHHHHHHHcC-ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence               011111222222 233445668899999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.98  E-value=1.2e-32  Score=219.18  Aligned_cols=172  Identities=17%  Similarity=0.152  Sum_probs=145.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||.||+++.++.+
T Consensus        71 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~  135 (325)
T cd05604          71 LYFVLDFVNGGELFFHLQRER---------------SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHV  135 (325)
T ss_pred             EEEEEcCCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCE
Confidence            348899999999999997543               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||...+..+....+.....
T Consensus       136 kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~-~G~~pf~~~~~~~~~~~~~~~~~  213 (325)
T cd05604         136 VLTDFGLCKEGIAQS-DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEML-YGLPPFYCRDVAEMYDNILHKPL  213 (325)
T ss_pred             EEeecCCcccCCCCC-CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhh-cCCCCCCCCCHHHHHHHHHcCCc
Confidence            999999986432211 1123345788999999998888999999999999999999 89999998887777776665432


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFP  207 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~  207 (223)
                        ......+..+.+++.+|++.+|.+||+++
T Consensus       214 --~~~~~~~~~~~~ll~~ll~~~p~~R~~~~  242 (325)
T cd05604         214 --VLRPGASLTAWSILEELLEKDRQRRLGAK  242 (325)
T ss_pred             --cCCCCCCHHHHHHHHHHhccCHHhcCCCC
Confidence              23446788899999999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.98  E-value=3.5e-32  Score=219.99  Aligned_cols=180  Identities=16%  Similarity=0.203  Sum_probs=147.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..                .+++..+..++.||+.||.|||+.|++||||||+||+++.++.+
T Consensus       118 ~~lv~Ey~~gg~L~~~~~~~----------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~i  181 (371)
T cd05622         118 LYMVMEYMPGGDLVNLMSNY----------------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL  181 (371)
T ss_pred             EEEEEcCCCCCcHHHHHHhc----------------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCE
Confidence            33889999999999999642                47899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCC----CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE----FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~----~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      +++|||++...............+++.|+|||.+....    ++.++|+||+||++|+|+ +|..||...+.......+.
T Consensus       182 kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell-~G~~Pf~~~~~~~~~~~i~  260 (371)
T cd05622         182 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML-VGDTPFYADSLVGTYSKIM  260 (371)
T ss_pred             EEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHH-hCCCCCCCCCHHHHHHHHH
Confidence            99999998755433222233456889999999986543    778999999999999999 7999999888877777776


Q ss_pred             hCcc--cCCCCCCChHHHHHHHHHhcCCCCCC--CCCHHHHHHHH
Q psy15108        173 SKKL--CWKHSSKTPEYITSLHEKCIHPHPHQ--RPTFPSIVTQL  213 (223)
Q Consensus       173 ~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~~ll~~L  213 (223)
                      ....  ..+.....+.++++++..|+..++.+  |++++++++|.
T Consensus       261 ~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         261 NHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             cCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence            5432  23334468899999999999844432  78999998874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0694|consensus

Probab=99.98  E-value=7e-33  Score=226.45  Aligned_cols=175  Identities=19%  Similarity=0.293  Sum_probs=153.3

Q ss_pred             cCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee
Q psy15108         12 KDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS   91 (223)
Q Consensus        12 ~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~   91 (223)
                      +..+....||||..||++..+.+.                ..|++..+..++.+++.||.|||++||++||+|-+|||+|
T Consensus       439 QT~~~l~fvmey~~Ggdm~~~~~~----------------~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD  502 (694)
T KOG0694|consen  439 QTKEHLFFVMEYVAGGDLMHHIHT----------------DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLD  502 (694)
T ss_pred             ccCCeEEEEEEecCCCcEEEEEec----------------ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEc
Confidence            345555689999999994444432                3599999999999999999999999999999999999999


Q ss_pred             cCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         92 SDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        92 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      ..|.+||.|||+++.....+ ....+..||+.|+|||++....|+.++|.|+|||++|||+ .|..||.+.+..++...|
T Consensus       503 ~eGh~kiADFGlcKe~m~~g-~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML-~Gq~PF~gddEee~FdsI  580 (694)
T KOG0694|consen  503 TEGHVKIADFGLCKEGMGQG-DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEML-VGESPFPGDDEEEVFDSI  580 (694)
T ss_pred             ccCcEEecccccccccCCCC-CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHH-cCCCCCCCCCHHHHHHHH
Confidence            99999999999998654222 2456789999999999999999999999999999999999 899999999999999999


Q ss_pred             HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCH
Q psy15108        172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF  206 (223)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~  206 (223)
                      ....  ...|..++.+..+++++++..+|++|...
T Consensus       581 ~~d~--~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  581 VNDE--VRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             hcCC--CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence            8754  44567789999999999999999999765

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.98  E-value=4.4e-32  Score=212.45  Aligned_cols=178  Identities=19%  Similarity=0.295  Sum_probs=140.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+. |+|.+++...+.              .+++..+..++.||++||.|||++|++||||||+||+++.++.++
T Consensus        79 ~lv~e~~~-~~l~~~l~~~~~--------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~k  143 (288)
T cd07871          79 TLVFEYLD-SDLKQYLDNCGN--------------LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELK  143 (288)
T ss_pred             EEEEeCCC-cCHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEE
Confidence            37889987 599999975432              578999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++....... .......++..|+|||.+.+ ..++.++|+||+||++|+|+ +|..||.+.+..+....+.....
T Consensus       144 l~DfG~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~-~g~~pf~~~~~~~~~~~~~~~~~  221 (288)
T cd07871         144 LADFGLARAKSVPT-KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMA-TGRPMFPGSTVKEELHLIFRLLG  221 (288)
T ss_pred             ECcCcceeeccCCC-ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHhC
Confidence            99999986532211 11233456788999998865 45789999999999999999 79999988776555444322100


Q ss_pred             -------------------cC---------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 -------------------CW---------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 -------------------~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                         ..         ......+.++.+++.+|++.||.+|||++|+++|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         222 TPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             CCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                               00         0012456788999999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.98  E-value=1.5e-31  Score=210.09  Aligned_cols=194  Identities=30%  Similarity=0.574  Sum_probs=150.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++..........    ......+++..+..++.|++.|+.|||+.|++|+||||.||+++.++.+
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~  169 (296)
T cd05095          94 LCMITEYMENGDLNQFLSRHEPQEAAE----KADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTI  169 (296)
T ss_pred             cEEEEEeCCCCcHHHHHHhcCcccccc----cccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCE
Confidence            448899999999999998754321110    1123458899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHh-
Q psy15108         97 KISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN-KGEMPFPDLSDDQVLSQLES-  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~-~~~~p~~~~~~~~~~~~~~~-  173 (223)
                      +++|||++........ ........+..|++||......++.++|+|||||++|++++ .+..||...+..+....... 
T Consensus       170 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~  249 (296)
T cd05095         170 KIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEF  249 (296)
T ss_pred             EeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHH
Confidence            9999999875432221 11122334567999998888889999999999999999984 27789987766555443321 


Q ss_pred             -----CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        174 -----KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       174 -----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                           .....+.+..++..+.+++.+||+.||.+||++.++++.|+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         250 FRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence                 11122334567889999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.98  E-value=1.1e-31  Score=208.13  Aligned_cols=187  Identities=32%  Similarity=0.490  Sum_probs=143.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||+.+|+|.+++.....          ......++..+..++.||+.|+.|||+.+++||||||.||+++.++.+
T Consensus        70 ~~lv~e~~~~g~L~~~l~~~~~----------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~  139 (269)
T cd05042          70 YLLVLEFCPLGDLKNYLRSNRG----------MVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSV  139 (269)
T ss_pred             eEEEEEeCCCCcHHHHHHhccc----------cccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcE
Confidence            4478999999999999987543          011235788899999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh-hhhcCCccccccccccccc-------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFD-------DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL  168 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~-------~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~  168 (223)
                      +++|||++......... .......+..|++||....       ..++.++|+||+||++|+|++.+..||......+..
T Consensus       140 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~  219 (269)
T cd05042         140 KIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVL  219 (269)
T ss_pred             EEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHH
Confidence            99999988643322211 1123344667999998642       346789999999999999996588999887766655


Q ss_pred             HHHHhCc-cc---CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        169 SQLESKK-LC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       169 ~~~~~~~-~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ....... ..   ...+..++..+.+++..|| .||++||+++++++.|+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         220 KQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             HHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            5543321 11   2223467888899999999 49999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0659|consensus

Probab=99.98  E-value=8.6e-32  Score=198.12  Aligned_cols=179  Identities=22%  Similarity=0.223  Sum_probs=143.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+ ..||+..|+++..              .++..++..++.++++|++|||++.|+|||+||.|++++.+|.+
T Consensus        76 l~lVfEfm-~tdLe~vIkd~~i--------------~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~l  140 (318)
T KOG0659|consen   76 LSLVFEFM-PTDLEVVIKDKNI--------------ILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQL  140 (318)
T ss_pred             eEEEEEec-cccHHHHhccccc--------------ccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcE
Confidence            34667766 4789999997654              79999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      |+.|||+++.+++.... ....+.|.+|.|||.+++. .|...+|+||.|||+.||+ .+..-|++.+..+.+..+-+.-
T Consensus       141 KiADFGLAr~f~~p~~~-~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELl-lr~P~fpG~sDidQL~~If~~L  218 (318)
T KOG0659|consen  141 KIADFGLARFFGSPNRI-QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELL-LRVPFFPGDSDIDQLSKIFRAL  218 (318)
T ss_pred             EeecccchhccCCCCcc-cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHH-ccCCCCCCCchHHHHHHHHHHc
Confidence            99999999977654321 2233788999999999875 5899999999999999999 7887777776655444432200


Q ss_pred             -----ccCC---------------------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 -----LCWK---------------------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 -----~~~~---------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                           ..|+                     .....++...+++.+|+.+||.+|+++.|++++
T Consensus       219 GTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  219 GTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             CCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence                 0111                     123445677899999999999999999999876

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.98  E-value=9.7e-32  Score=208.04  Aligned_cols=179  Identities=21%  Similarity=0.316  Sum_probs=148.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++...+               .+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.+
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~  145 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYG---------------AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGI  145 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhcc---------------CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCE
Confidence            448899999999999997643               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh-----hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYY-----KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||.+.........     ......++..|++||.+.+..++.++|+||+|+++|+++ +|..||...........+
T Consensus       146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~~~~~~~~  224 (267)
T cd06628         146 KISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEML-TGKHPFPDCTQLQAIFKI  224 (267)
T ss_pred             EecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHh-hCCCCCCCccHHHHHHHH
Confidence            99999988765422110     111234567899999998888889999999999999999 799999877665555544


Q ss_pred             HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ... ..+..+...+..+.+++.+||+.+|.+||++.+++++
T Consensus       225 ~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         225 GEN-ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             hcc-CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence            443 3344556788999999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.98  E-value=4.9e-32  Score=219.98  Aligned_cols=180  Identities=17%  Similarity=0.210  Sum_probs=144.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||.||+++.++.+
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~---------------~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~  140 (381)
T cd05626          76 LYFVMDYIPGGDMMSLLIRME---------------VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHI  140 (381)
T ss_pred             EEEEEecCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCE
Confidence            448899999999999998653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh---h-------------------------------------------hhhhcCCccccccccccc
Q psy15108         97 KISLSGLSKDTYQKE---Y-------------------------------------------YKYRNAILPLRWLPYEAV  130 (223)
Q Consensus        97 ~l~df~~~~~~~~~~---~-------------------------------------------~~~~~~~~~~~~~~pe~~  130 (223)
                      +++|||++.......   .                                           .......++..|+|||.+
T Consensus       141 kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~  220 (381)
T cd05626         141 KLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVL  220 (381)
T ss_pred             EEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHH
Confidence            999999875321000   0                                           001124688999999999


Q ss_pred             ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc--ccCCCCCCChHHHHHHHHH--hcCCCCCCCCCH
Q psy15108        131 FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK--LCWKHSSKTPEYITSLHEK--CIHPHPHQRPTF  206 (223)
Q Consensus       131 ~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~--~l~~dp~~Rps~  206 (223)
                      .+..++.++||||+||++|+|+ +|..||......+....+....  ...+....+++++.+++.+  |+..++..||++
T Consensus       221 ~~~~~~~~~DiwSlG~il~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~  299 (381)
T cd05626         221 LRKGYTQLCDWWSVGVILFEML-VGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGA  299 (381)
T ss_pred             cCCCCCCccceeehhhHHHHHH-hCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCH
Confidence            8888999999999999999999 8999998877666555554321  2233334578899999998  445666679999


Q ss_pred             HHHHHH
Q psy15108        207 PSIVTQ  212 (223)
Q Consensus       207 ~~ll~~  212 (223)
                      ++++.|
T Consensus       300 ~~~l~h  305 (381)
T cd05626         300 DDIKAH  305 (381)
T ss_pred             HHHhcC
Confidence            999876

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.98  E-value=1.6e-31  Score=205.66  Aligned_cols=181  Identities=15%  Similarity=0.204  Sum_probs=152.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.+++.....             ..+++..+..++.|+++|+.|||+.+++|+||+|.||+++.++.+
T Consensus        74 ~~~~~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~  140 (256)
T cd08221          74 LLIEMEYANGGTLYDKIVRQKG-------------QLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLI  140 (256)
T ss_pred             EEEEEEecCCCcHHHHHHhccc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCE
Confidence            3377999999999999986532             458999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++........ ......++..|.+||...+..++.++|+||+|+++++|+ +|..||......+....+..+..
T Consensus       141 kl~d~~~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~-~g~~~~~~~~~~~~~~~~~~~~~  218 (256)
T cd08221         141 KLGDFGISKILGSEYS-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL-TLKRTFDATNPLNLVVKIVQGNY  218 (256)
T ss_pred             EECcCcceEEcccccc-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHcCCC
Confidence            9999998865433221 123345778899999988888889999999999999999 78899988877777777665533


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      . +.+..++.++.+++.+||..+|.+||+++++++++
T Consensus       219 ~-~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         219 T-PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             C-CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            3 33466788999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.98  E-value=1.9e-31  Score=205.62  Aligned_cols=175  Identities=24%  Similarity=0.433  Sum_probs=139.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC-
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~-   95 (223)
                      ..+|+||+.+|+|.++++..+.              .+++..++.++.||+.|+.|||+.+++|+||||.||+++.++. 
T Consensus        74 ~~lv~e~~~~g~L~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~  139 (258)
T cd05078          74 SIMVQEYVKFGSLDTYLKKNKN--------------LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDR  139 (258)
T ss_pred             cEEEEecCCCCcHHHHHhcCCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEeccccc
Confidence            4588999999999999986432              5899999999999999999999999999999999999987654 


Q ss_pred             -------eEEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy15108         96 -------VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV  167 (223)
Q Consensus        96 -------~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~  167 (223)
                             ++++|||++......     ....++..|++||.+.+. .++.++|+||+|+++|++++.+..|+........
T Consensus       140 ~~~~~~~~~l~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~  214 (258)
T cd05078         140 KTGNPPFIKLSDPGISITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK  214 (258)
T ss_pred             ccCCCceEEecccccccccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH
Confidence                   689999987644322     223456779999998763 4788999999999999999434677766655544


Q ss_pred             HHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      ......   ....+...+.++.+++.+||+.+|++||+++++++.|
T Consensus       215 ~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         215 LQFYED---RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             HHHHHc---cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            332222   2233445667899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.98  E-value=9.7e-32  Score=210.27  Aligned_cols=178  Identities=18%  Similarity=0.250  Sum_probs=141.5

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+. ++|.+++.....             ..+++..+..++.|++.||.|||+.|++|+||||.||+++.++.++
T Consensus        83 ~lv~e~~~-~~l~~~~~~~~~-------------~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~k  148 (288)
T cd07863          83 TLVFEHVD-QDLRTYLDKVPP-------------PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVK  148 (288)
T ss_pred             EEEEcccc-cCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence            47788887 589999976432             3589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc--
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK--  175 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~--  175 (223)
                      ++|||++.......  ......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||...........+....  
T Consensus       149 l~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~-~g~~~f~~~~~~~~~~~~~~~~~~  225 (288)
T cd07863         149 LADFGLARIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKPLFCGNSEADQLGKIFDLIGL  225 (288)
T ss_pred             ECccCccccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHH-hCCcCcCCCCHHHHHHHHHHHhCC
Confidence            99999986543221  122345678899999998888999999999999999999 8999998776554443332200  


Q ss_pred             ---ccC--------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ---LCW--------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ---~~~--------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                         ..+                    ...+.++..+.+++.+|++.||++||++.+++.|
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         226 PPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             CChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence               000                    0113457788999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.98  E-value=1.9e-31  Score=209.54  Aligned_cols=195  Identities=30%  Similarity=0.546  Sum_probs=148.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.+++........-.   .......+++..++.++.|++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        92 ~~lv~e~~~~~~L~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~  168 (295)
T cd05097          92 LCMITEYMENGDLNQFLSQREIESTFT---HANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTI  168 (295)
T ss_pred             cEEEEecCCCCcHHHHHHhcccccccc---ccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcE
Confidence            347899999999999997643210000   00112347899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHh-
Q psy15108         97 KISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN-KGEMPFPDLSDDQVLSQLES-  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~-~~~~p~~~~~~~~~~~~~~~-  173 (223)
                      +++|||++........ .......++..|++||......++.++|+||||++++++++ .+..||......+....+.. 
T Consensus       169 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~  248 (295)
T cd05097         169 KIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEF  248 (295)
T ss_pred             EecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHh
Confidence            9999999865432221 11222344678999999888889999999999999999984 26778887766655544322 


Q ss_pred             -----CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        174 -----KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       174 -----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                           .......+...+..+.+++.+||+.+|++||+++++++.|+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         249 FRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             hhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence                 11112334557889999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.98  E-value=1.5e-31  Score=208.65  Aligned_cols=179  Identities=20%  Similarity=0.276  Sum_probs=145.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+.+|+|.+++....              .++++..+..++.|+++||.|||+.|++|+||+|+||+++.++.++
T Consensus        78 ~~v~e~~~~~~l~~~~~~~~--------------~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~k  143 (282)
T cd06643          78 WILIEFCAGGAVDAVMLELE--------------RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIK  143 (282)
T ss_pred             EEEEEecCCCcHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEE
Confidence            37899999999999887532              3589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      ++|||++....... .......++..|++||.+.     ...++.++|+||+||++|+++ +|..||...+..+....+.
T Consensus       144 l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~-~g~~p~~~~~~~~~~~~~~  221 (282)
T cd06643         144 LADFGVSAKNTRTI-QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA-QIEPPHHELNPMRVLLKIA  221 (282)
T ss_pred             Eccccccccccccc-cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHc-cCCCCccccCHHHHHHHHh
Confidence            99999986543221 1123345678899999874     344678999999999999999 7999998877666555554


Q ss_pred             hCcc-cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKL-CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .... ....+..++.++.+++.+||+.+|.+||++.+++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         222 KSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             hcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            4322 223345678899999999999999999999999865

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.97  E-value=5.1e-32  Score=216.14  Aligned_cols=181  Identities=15%  Similarity=0.206  Sum_probs=147.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..+.              .+++..+..++.|++.|+.|||+.+++||||||+||+++.++.+
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~~--------------~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~  141 (332)
T cd05623          76 LYLVMDYYVGGDLLTLLSKFED--------------RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHI  141 (332)
T ss_pred             EEEEEeccCCCcHHHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCE
Confidence            4489999999999999986432              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||++...............++..|+|||.+.     ...++.++|+|||||++|+|+ +|..||...+..+....+
T Consensus       142 kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell-~g~~Pf~~~~~~~~~~~i  220 (332)
T cd05623         142 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKI  220 (332)
T ss_pred             EEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHh-cCCCCCCCCCHHHHHHHH
Confidence            99999998654332222223356788999999975     345788999999999999999 799999988887777777


Q ss_pred             HhCcccCCC---CCCChHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q psy15108        172 ESKKLCWKH---SSKTPEYITSLHEKCIHPHPHQ--RPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~--Rps~~~ll~~  212 (223)
                      .........   ...+++++++++.+|+..++..  |++++++++|
T Consensus       221 ~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         221 MNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             hCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            654333222   2357889999999988654443  6899999877

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.97  E-value=3.6e-31  Score=205.22  Aligned_cols=187  Identities=32%  Similarity=0.518  Sum_probs=142.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+++|+|.++++....          ......++..+..++.|++.|+.|||+.+++|+||||.||+++..+.+
T Consensus        70 ~~lv~e~~~~g~L~~~l~~~~~----------~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~  139 (269)
T cd05087          70 YLLVMEFCPLGDLKGYLRSCRK----------AELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTV  139 (269)
T ss_pred             cEEEEECCCCCcHHHHHHHhhh----------cccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcE
Confidence            4488999999999999986543          012346778888999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh-hhhhcCCcccccccccccccC-------CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy15108         97 KISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDD-------EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL  168 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~-------~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~  168 (223)
                      +++|||++........ .......++..|++||.+...       .++.++|+||||+++|++++.|..||......+..
T Consensus       140 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~  219 (269)
T cd05087         140 KIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL  219 (269)
T ss_pred             EECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH
Confidence            9999998864332221 112233456779999987532       35779999999999999985599999877665544


Q ss_pred             HHHHhC-cccC---CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        169 SQLESK-KLCW---KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       169 ~~~~~~-~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ...... ....   ......++.+.+++..|| .+|++||++++|+..|+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         220 TYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             HHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            332221 1111   122346788999999999 58999999999998774

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>PTZ00284 protein kinase; Provisional

Probab=99.97  E-value=2.9e-32  Score=226.65  Aligned_cols=173  Identities=15%  Similarity=0.212  Sum_probs=134.2

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCC---
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDL---   94 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~---   94 (223)
                      +|++++ +++|.+++...+               .+++..+..++.||+.||.|||+ .||+||||||.||+++..+   
T Consensus       209 iv~~~~-g~~l~~~l~~~~---------------~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~  272 (467)
T PTZ00284        209 IVMPKY-GPCLLDWIMKHG---------------PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVV  272 (467)
T ss_pred             EEEecc-CCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccc
Confidence            455554 889999997653               49999999999999999999998 5999999999999998664   


Q ss_pred             -------------CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q psy15108         95 -------------SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD  161 (223)
Q Consensus        95 -------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~  161 (223)
                                   .+||+|||.+.....    ......++..|+|||.+.+..++.++|||||||++|||+ +|+.||.+
T Consensus       273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~ell-tG~~pf~~  347 (467)
T PTZ00284        273 DPVTNRALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELY-TGKLLYDT  347 (467)
T ss_pred             ccccccccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHH-hCCCCCCC
Confidence                         489999998753221    123456788999999999989999999999999999999 79999987


Q ss_pred             CCHHHHHHHHHhCcc-------------------------cCCC---------------CCCChHHHHHHHHHhcCCCCC
Q psy15108        162 LSDDQVLSQLESKKL-------------------------CWKH---------------SSKTPEYITSLHEKCIHPHPH  201 (223)
Q Consensus       162 ~~~~~~~~~~~~~~~-------------------------~~~~---------------~~~~~~~~~~li~~~l~~dp~  201 (223)
                      .+..+.+..+.....                         .+..               .....+.+.+||.+||+.||+
T Consensus       348 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~  427 (467)
T PTZ00284        348 HDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQ  427 (467)
T ss_pred             CChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChh
Confidence            765544333221100                         0000               000134567999999999999


Q ss_pred             CCCCHHHHHHH
Q psy15108        202 QRPTFPSIVTQ  212 (223)
Q Consensus       202 ~Rps~~~ll~~  212 (223)
                      +|||++|+++|
T Consensus       428 ~R~ta~e~L~H  438 (467)
T PTZ00284        428 KRLNARQMTTH  438 (467)
T ss_pred             hCCCHHHHhcC
Confidence            99999999975

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.97  E-value=2.4e-32  Score=221.52  Aligned_cols=179  Identities=15%  Similarity=0.153  Sum_probs=144.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||.||+++.++.+
T Consensus        76 ~~lv~E~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~i  140 (376)
T cd05598          76 LYFVMDYIPGGDMMSLLIRLG---------------IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHI  140 (376)
T ss_pred             EEEEEeCCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCE
Confidence            348899999999999997653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh------------------------------------------hhhhhcCCcccccccccccccCC
Q psy15108         97 KISLSGLSKDTYQKE------------------------------------------YYKYRNAILPLRWLPYEAVFDDE  134 (223)
Q Consensus        97 ~l~df~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~~~pe~~~~~~  134 (223)
                      +++|||++.......                                          ........+++.|+|||.+.+..
T Consensus       141 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  220 (376)
T cd05598         141 KLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTG  220 (376)
T ss_pred             EEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCC
Confidence            999999874221000                                          00011246788999999999888


Q ss_pred             CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc--CCCCCCChHHHHHHHHHhcCCCCCCCC---CHHHH
Q psy15108        135 FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC--WKHSSKTPEYITSLHEKCIHPHPHQRP---TFPSI  209 (223)
Q Consensus       135 ~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rp---s~~~l  209 (223)
                      ++.++||||+||++|+|+ +|..||.+....+....+......  .+....++.++.+++.+|+ .+|.+|+   ++.++
T Consensus       221 ~~~~~DiwSlGvilyell-~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el  298 (376)
T cd05598         221 YTQLCDWWSVGVILYEML-VGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI  298 (376)
T ss_pred             CCcceeeeeccceeeehh-hCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence            999999999999999999 799999988876666555443222  2223457888999999976 5999999   89999


Q ss_pred             HHH
Q psy15108        210 VTQ  212 (223)
Q Consensus       210 l~~  212 (223)
                      ++|
T Consensus       299 l~h  301 (376)
T cd05598         299 KAH  301 (376)
T ss_pred             hCC
Confidence            876

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.97  E-value=3.5e-31  Score=205.55  Aligned_cols=188  Identities=30%  Similarity=0.547  Sum_probs=151.3

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++++|+.+|+|.+++......         .+...+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.+++
T Consensus        84 ~~~~~~~~~~l~~~~~~~~~~---------~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl  154 (273)
T cd05074          84 VILPFMKHGDLHTFLLMSRIG---------EEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCV  154 (273)
T ss_pred             EEEecCCCCcHHHHHHHhccc---------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEE
Confidence            557899999999998754320         01135899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         99 SLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        99 ~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      +|||++........ ........+..|++||......++.++|+||||+++|++++.|..||.+.+..+....+... ..
T Consensus       155 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~  233 (273)
T cd05074         155 ADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG-NR  233 (273)
T ss_pred             CcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC-Cc
Confidence            99998875432221 11122334567899999888888999999999999999995589999888777666665544 22


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                      ...+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus       234 ~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         234 LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            333456788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.97  E-value=6.4e-32  Score=209.13  Aligned_cols=180  Identities=19%  Similarity=0.221  Sum_probs=141.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+++|.++++..+               ++++..+..++.|+++|+.|||+.+++|+|++|.||+++.++.+
T Consensus        81 ~~iv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~  145 (267)
T cd06646          81 LWICMEYCGGGSLQDIYHVTG---------------PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDV  145 (267)
T ss_pred             EEEEEeCCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCE
Confidence            347899999999999997543               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +++|||++....... .......++..|++||.+.   ...++.++|+||+|+++++|+ +|..||...........+..
T Consensus       146 ~l~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~-~g~~p~~~~~~~~~~~~~~~  223 (267)
T cd06646         146 KLADFGVAAKITATI-AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELA-ELQPPMFDLHPMRALFLMSK  223 (267)
T ss_pred             EECcCccceeecccc-cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHH-hCCCCccccchhhhheeeec
Confidence            999999987543221 1112345667899999874   344678999999999999999 78889876554433332222


Q ss_pred             CcccCC---CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        174 KKLCWK---HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       174 ~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      .....+   .....+..+.+++.+||..+|++||+++++++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         224 SNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             CCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            222221   1234678899999999999999999999999865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG1025|consensus

Probab=99.97  E-value=8.8e-32  Score=223.72  Aligned_cols=201  Identities=23%  Similarity=0.413  Sum_probs=176.3

Q ss_pred             chHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccC
Q psy15108          2 DLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK   81 (223)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~   81 (223)
                      ||+.++..+..+.  ..+|..+++.|+|.++++.++.              ++.....+.+.+||++|+.|||+++++||
T Consensus       759 nl~RLLgvc~~s~--~qlvtq~mP~G~LlDyvr~hr~--------------~igsq~lLnw~~QIAkgM~YLe~qrlVHr  822 (1177)
T KOG1025|consen  759 NLLRLLGVCMLST--LQLVTQLMPLGCLLDYVREHRD--------------NIGSQDLLNWCYQIAKGMKYLEEQRLVHR  822 (1177)
T ss_pred             hHHHHhhhcccch--HHHHHHhcccchHHHHHHHhhc--------------cccHHHHHHHHHHHHHHHHHHHhcchhhh
Confidence            3566666666544  6688999999999999998765              69999999999999999999999999999


Q ss_pred             CCCCCCeeeecCCCeEEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCC
Q psy15108         82 DIAARNCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP  160 (223)
Q Consensus        82 di~~~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~  160 (223)
                      ||-++|+|+.....+|+.|||+++...... .........++.|++-|.+....|+.++|||||||++||++|.|..|+.
T Consensus       823 dLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~  902 (1177)
T KOG1025|consen  823 DLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYD  902 (1177)
T ss_pred             hhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccC
Confidence            999999999999999999999998654433 2223345567889999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        161 DLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      +....++...+..+ .+++.|+.++..++.++.+||..|+..||+|+++...+.+...+
T Consensus       903 gi~~~eI~dlle~g-eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard  960 (1177)
T KOG1025|consen  903 GIPAEEIPDLLEKG-ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD  960 (1177)
T ss_pred             CCCHHHhhHHHhcc-ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence            99999998888887 55888999999999999999999999999999999998886543

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.97  E-value=2.5e-31  Score=204.34  Aligned_cols=179  Identities=20%  Similarity=0.277  Sum_probs=148.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC-C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-S   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~-~   95 (223)
                      ..+|+||+++++|.+++.....             ..+++..++.++.++++|+.|||++|++|+||+|.||+++.++ .
T Consensus        74 ~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~  140 (256)
T cd08220          74 LMIVMEYAPGGTLAEYIQKRCN-------------SLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMV  140 (256)
T ss_pred             EEEEEecCCCCCHHHHHHHhcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCE
Confidence            4488999999999999987543             4589999999999999999999999999999999999998654 5


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++++|||++.......  ......++..|++||.+....++.++|+||+|+++++++ ++..||...+.......+....
T Consensus       141 ~~l~d~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~  217 (256)
T cd08220         141 VKIGDFGISKILSSKS--KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELA-SLKRAFEAANLPALVLKIMSGT  217 (256)
T ss_pred             EEEccCCCceecCCCc--cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHH-hCCCCcccCchHHHHHHHHhcC
Confidence            7999999987543322  112345677899999998888889999999999999999 7899998877666665555542


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       ..+.+..++.++.+++..||+.+|.+||++++++++
T Consensus       218 -~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         218 -FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             -CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence             233455678899999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.97  E-value=2.2e-31  Score=207.96  Aligned_cols=185  Identities=25%  Similarity=0.381  Sum_probs=142.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+++|+|.+++...+.              .+++..++.++.|++.||.|||+.|++|+||+|.||+++.++.+
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~--------------~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~  147 (284)
T cd05081          82 LRLVMEYLPYGSLRDYLQKHRE--------------RLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRV  147 (284)
T ss_pred             eEEEEEecCCCCHHHHHHhcCc--------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeE
Confidence            4478999999999999975432              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh--hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--------
Q psy15108         97 KISLSGLSKDTYQKEYY--KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ--------  166 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~--------  166 (223)
                      +++|||++.........  .......+..|++||...+..++.++|+||+|+++++++ ++..++.......        
T Consensus       148 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~-~~~~~~~~~~~~~~~~~~~~~  226 (284)
T cd05081         148 KIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF-TYSDKSCSPPAEFMRMMGNDK  226 (284)
T ss_pred             EECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHh-hcCCcCCCcchhhhhhccccc
Confidence            99999998754322110  111122345589999998888899999999999999999 5554543221110        


Q ss_pred             -------HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        167 -------VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       167 -------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                             ............+.+..++.++.+++.+||..+|++|||+.++++.|+.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         227 QGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             ccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence                   01111222233444567788999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.97  E-value=9.2e-32  Score=217.79  Aligned_cols=178  Identities=18%  Similarity=0.268  Sum_probs=139.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+. ++|.+++...               ..+++..+..++.||+.||.|||+.|++||||||+||+++.++.++
T Consensus        80 ~lv~e~~~-~~l~~~~~~~---------------~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~k  143 (372)
T cd07853          80 YVVTELMQ-SDLHKIIVSP---------------QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLK  143 (372)
T ss_pred             EEEeeccc-cCHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEE
Confidence            36777775 6888888643               3499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh---
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES---  173 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~---  173 (223)
                      ++|||++...............++..|+|||.+.+. .++.++|+||+||++|+|+ +|+.||.+.+.......+..   
T Consensus       144 L~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~~i~~~~g  222 (372)
T cd07853         144 ICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELL-GRRILFQAQSPIQQLDLITDLLG  222 (372)
T ss_pred             eccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHH-cCCCCCCCCCHHHHHHHHHHHcC
Confidence            999999875432221122334567889999998764 4788999999999999999 79999987765544433321   


Q ss_pred             --------------------CcccC-------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 --------------------KKLCW-------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 --------------------~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                          .....       ......++++.+++.+||+.||++|||+.+++.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         223 TPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             CCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence                                00000       1123457789999999999999999999999876

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.5e-32  Score=219.43  Aligned_cols=179  Identities=16%  Similarity=0.181  Sum_probs=144.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.|++.||.|||+.|++||||||+||+++.++.+
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~---------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~  140 (377)
T cd05629          76 LYLIMEFLPGGDLMTMLIKYD---------------TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHI  140 (377)
T ss_pred             eEEEEeCCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCE
Confidence            448899999999999998643               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-------------hh---------------------------------hhhcCCccccccccccc
Q psy15108         97 KISLSGLSKDTYQKE-------------YY---------------------------------KYRNAILPLRWLPYEAV  130 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-------------~~---------------------------------~~~~~~~~~~~~~pe~~  130 (223)
                      +++|||++.......             ..                                 ......+++.|+|||.+
T Consensus       141 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  220 (377)
T cd05629         141 KLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIF  220 (377)
T ss_pred             EEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHH
Confidence            999999985321100             00                                 00123578899999999


Q ss_pred             ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC--CCCCCChHHHHHHHHHhcCCCCCCC---CC
Q psy15108        131 FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW--KHSSKTPEYITSLHEKCIHPHPHQR---PT  205 (223)
Q Consensus       131 ~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R---ps  205 (223)
                      .+..++.++|+||+||++|+|+ +|..||......+....+.......  +....++.++.+++.+|+. +|.+|   ++
T Consensus       221 ~~~~~~~~~DiwSlGvil~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~  298 (377)
T cd05629         221 LQQGYGQECDWWSLGAIMFECL-IGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGG  298 (377)
T ss_pred             ccCCCCCceeeEecchhhhhhh-cCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence            8888999999999999999999 8999998887777666665432222  2223568889999999997 67665   59


Q ss_pred             HHHHHHH
Q psy15108        206 FPSIVTQ  212 (223)
Q Consensus       206 ~~~ll~~  212 (223)
                      +.+++.|
T Consensus       299 ~~~~l~h  305 (377)
T cd05629         299 AHEIKSH  305 (377)
T ss_pred             HHHHhcC
Confidence            9998876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.97  E-value=3.4e-31  Score=205.27  Aligned_cols=184  Identities=17%  Similarity=0.291  Sum_probs=152.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+++++|.+++.....           ....+++..++.++.|++.|+.|||+ .+++|+||+|.||+++..+.
T Consensus        84 ~~lv~e~~~~~~l~~~l~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~  152 (269)
T cd08528          84 LYIVMDLIEGAPLGEHFNSLKE-----------KKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDK  152 (269)
T ss_pred             EEEEEecCCCCcHHHHHHHHHh-----------ccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCc
Confidence            4488999999999999865332           22468999999999999999999996 78999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++++|||.+.......  ......++..|++||...+..++.++|+||||+++|+++ +|..||...........+....
T Consensus       153 ~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~-~g~~p~~~~~~~~~~~~~~~~~  229 (269)
T cd08528         153 VTITDFGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMC-TLQPPFYSTNMLSLATKIVEAV  229 (269)
T ss_pred             EEEecccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHH-hCCCcccccCHHHHHHHHhhcc
Confidence            9999999987544332  223455677899999998888899999999999999999 7899998777666666655553


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      .........+.++.+++.+||+.||++||++.|+..++.
T Consensus       230 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         230 YEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             CCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            333333367889999999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.97  E-value=2.1e-31  Score=206.00  Aligned_cols=180  Identities=14%  Similarity=0.236  Sum_probs=147.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++.+.+               ++++..+..++.|++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~  141 (265)
T cd06631          77 ISIFMEFVPGGSISSILNRFG---------------PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGII  141 (265)
T ss_pred             EEEEEecCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeE
Confidence            448899999999999997643               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-----hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKE-----YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||++.......     ........++..|++||...+..++.++|+||+|+++++++ +|..||...+.......+
T Consensus       142 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~-~g~~p~~~~~~~~~~~~~  220 (265)
T cd06631         142 KLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMA-TGKPPLASMDRLAAMFYI  220 (265)
T ss_pred             EeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHH-hCCCccccCChHHHHHHh
Confidence            999999886532111     11112345677899999998888899999999999999999 799999877665544443


Q ss_pred             HhC-cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESK-KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ... ...+..+...+.++.+++++||+.+|.+||++.+++.+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         221 GAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             hhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            332 22334556788999999999999999999999999864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.97  E-value=1.6e-31  Score=206.94  Aligned_cols=179  Identities=20%  Similarity=0.208  Sum_probs=142.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.++++..+               .+++.+++.++.|++.|+.|||+.|++|+||+|.||+++.++.+
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~  145 (267)
T cd06645          81 LWICMEFCGGGSLQDIYHVTG---------------PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHV  145 (267)
T ss_pred             EEEEEeccCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCE
Confidence            448899999999999997653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +++|||++....... .......++..|+|||.+.   ...++.++|+||+||++|+++ ++..||..............
T Consensus       146 ~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~-~~~~p~~~~~~~~~~~~~~~  223 (267)
T cd06645         146 KLADFGVSAQITATI-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELA-ELQPPMFDLHPMRALFLMTK  223 (267)
T ss_pred             EECcceeeeEccCcc-cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHh-cCCCCcccccchhhHHhhhc
Confidence            999999876443221 1123346778899999874   445788999999999999999 78889876554443333322


Q ss_pred             CcccCCC---CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWKH---SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....++.   ...++..+.+++.+||+.+|++||++++++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         224 SNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             cCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            2222211   22467889999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.97  E-value=7e-32  Score=219.19  Aligned_cols=179  Identities=16%  Similarity=0.166  Sum_probs=143.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.||+.||.|||+.+++||||||+||+++.++.+
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~---------------~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~  140 (382)
T cd05625          76 LYFVMDYIPGGDMMSLLIRMG---------------IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHI  140 (382)
T ss_pred             EEEEEeCCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCE
Confidence            348999999999999997653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh----------------------------------------------hhhhhcCCccccccccccc
Q psy15108         97 KISLSGLSKDTYQKE----------------------------------------------YYKYRNAILPLRWLPYEAV  130 (223)
Q Consensus        97 ~l~df~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~pe~~  130 (223)
                      +++|||++.......                                              ........+++.|+|||.+
T Consensus       141 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~  220 (382)
T cd05625         141 KLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVL  220 (382)
T ss_pred             EEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHh
Confidence            999999874221000                                              0001123578899999999


Q ss_pred             ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc--cCCCCCCChHHHHHHHHHhcCCCCCCCCC---
Q psy15108        131 FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL--CWKHSSKTPEYITSLHEKCIHPHPHQRPT---  205 (223)
Q Consensus       131 ~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps---  205 (223)
                      .+..++.++|+||+||++|+|+ +|..||...+..+....+.....  ..+.....++++.+++.+|+ .+|.+|++   
T Consensus       221 ~~~~~~~~~DiwSlGvil~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~  298 (382)
T cd05625         221 LRTGYTQLCDWWSVGVILYEML-VGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNG  298 (382)
T ss_pred             cCCCCCCeeeEEechHHHHHHH-hCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCC
Confidence            8888999999999999999999 79999998877666655544222  22223457888999998876 49999987   


Q ss_pred             HHHHHHH
Q psy15108        206 FPSIVTQ  212 (223)
Q Consensus       206 ~~~ll~~  212 (223)
                      +.+++.|
T Consensus       299 ~~ei~~h  305 (382)
T cd05625         299 ADEIKAH  305 (382)
T ss_pred             HHHHhcC
Confidence            8888765

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.97  E-value=1.6e-31  Score=206.86  Aligned_cols=178  Identities=19%  Similarity=0.260  Sum_probs=144.5

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+++++|.+++...+               .+++..++.++.|++.|+.|||+.+++|+|++|+||+++.++.++
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~  146 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYG---------------ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVK  146 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEE
Confidence            36889999999999997643               489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         98 ISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        98 l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++|||++.......  ........++..|+|||.+.+..++.++|+||+||++|+++ +|..||......+.........
T Consensus       147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~-~g~~pf~~~~~~~~~~~~~~~~  225 (266)
T cd06651         147 LGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEML-TEKPPWAEYEAMAAIFKIATQP  225 (266)
T ss_pred             EccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHH-HCCCCccccchHHHHHHHhcCC
Confidence            99999886542211  01112234677899999998888899999999999999999 7999998777666555544433


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..+..+...++.+.+++ .||..+|++||++++++.|
T Consensus       226 ~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         226 TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence            34444556678888888 6777899999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.97  E-value=2.6e-31  Score=208.88  Aligned_cols=178  Identities=17%  Similarity=0.280  Sum_probs=145.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+++++|.++++.                ..+++.++..++.|++.|+.|||+.|++|+||+|+||+++.++.+
T Consensus        92 ~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~  155 (296)
T cd06654          92 LWVVMEYLAGGSLTDVVTE----------------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV  155 (296)
T ss_pred             EEEeecccCCCCHHHHHHh----------------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCE
Confidence            4489999999999999964                247899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC-c
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK-K  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~-~  175 (223)
                      +++|||++........ ......++..|++||.+....++.++|+|||||++|+++ +|..||............... .
T Consensus       156 kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~-~g~~pf~~~~~~~~~~~~~~~~~  233 (296)
T cd06654         156 KLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI-EGEPPYLNENPLRALYLIATNGT  233 (296)
T ss_pred             EECccccchhcccccc-ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHH-hCCCCCCCCCHHHhHHHHhcCCC
Confidence            9999998765332211 112345677899999998888899999999999999999 799999877654443333222 1


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+...+..+.+++.+||..+|++||++++++++
T Consensus       234 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             CCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            2223345677889999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.97  E-value=1.2e-31  Score=209.66  Aligned_cols=179  Identities=20%  Similarity=0.307  Sum_probs=144.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++...+.             ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.+
T Consensus        75 ~~lv~e~~~g~~L~~~l~~~~~-------------~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~  141 (285)
T cd05630          75 LCLVLTLMNGGDLKFHIYHMGE-------------AGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHI  141 (285)
T ss_pred             EEEEEEecCCCcHHHHHHHhcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCE
Confidence            3388999999999999976433             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD---QVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~---~~~~~~~~  173 (223)
                      +++|||++.......  ......++..|+|||.+.+..++.++|+||+|+++|+|+ +|..||......   ........
T Consensus       142 ~l~Dfg~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~-~g~~Pf~~~~~~~~~~~~~~~~~  218 (285)
T cd05630         142 RISDLGLAVHVPEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI-AGQSPFQQRKKKIKREEVERLVK  218 (285)
T ss_pred             EEeeccceeecCCCc--cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHH-hCCCCCCCCCccchHHHHHhhhh
Confidence            999999886433221  112346788899999998888999999999999999999 799999865432   22222212


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                      . .....+..+++++.+++.+||+.||++||+     ++++++|
T Consensus       219 ~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h  261 (285)
T cd05630         219 E-VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH  261 (285)
T ss_pred             h-hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence            1 122334567888999999999999999999     7888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.97  E-value=4.4e-32  Score=218.78  Aligned_cols=179  Identities=16%  Similarity=0.186  Sum_probs=145.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+               .+++..+..++.|++.||.|||+.|++||||||.||+++.++.+
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~---------------~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~v  140 (360)
T cd05627          76 LYLIMEFLPGGDMMTLLMKKD---------------TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHV  140 (360)
T ss_pred             EEEEEeCCCCccHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCE
Confidence            448899999999999998653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh----------------------------------hhhhcCCcccccccccccccCCCCcccchH
Q psy15108         97 KISLSGLSKDTYQKEY----------------------------------YKYRNAILPLRWLPYEAVFDDEFSTKSDVY  142 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~  142 (223)
                      +++|||++........                                  .......+++.|+|||.+.+..++.++|+|
T Consensus       141 kL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~Diw  220 (360)
T cd05627         141 KLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWW  220 (360)
T ss_pred             EEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceec
Confidence            9999998764321100                                  001124678899999999888899999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC--CCCCCChHHHHHHHHHhcCCCCCCCCC---HHHHHHH
Q psy15108        143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW--KHSSKTPEYITSLHEKCIHPHPHQRPT---FPSIVTQ  212 (223)
Q Consensus       143 slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps---~~~ll~~  212 (223)
                      |+||++|+|+ +|..||...........+.......  +.....++++++++.+++. +|.+|++   +.++++|
T Consensus       221 SlGvilyel~-tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         221 SLGVIMYEML-IGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH  293 (360)
T ss_pred             cccceeeecc-cCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence            9999999999 8999999888877777666432222  2223467889999998774 9999985   6777765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.97  E-value=4.3e-31  Score=203.24  Aligned_cols=180  Identities=21%  Similarity=0.283  Sum_probs=150.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+++|.+++.....             ..+++.+++.++.|++.|+.|||+.+++|+||+|+||+++.++.+
T Consensus        74 ~~lv~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~  140 (256)
T cd08218          74 LYIVMDYCEGGDLYKKINAQRG-------------VLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTI  140 (256)
T ss_pred             EEEEEecCCCCcHHHHHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCE
Confidence            3488999999999999976432             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++........ ......++..|++||...+..++.++|+||||+++++++ +|..||...........+..+ .
T Consensus       141 ~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~-~g~~~~~~~~~~~~~~~~~~~-~  217 (256)
T cd08218         141 KLGDFGIARVLNSTVE-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMC-TLKHAFEAGNMKNLVLKIIRG-S  217 (256)
T ss_pred             EEeeccceeecCcchh-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHH-cCCCCccCCCHHHHHHHHhcC-C
Confidence            9999998865433221 122345677899999998888889999999999999999 799999877777666666554 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..+.+...+.++.+++.+||+.+|.+||++++++++
T Consensus       218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         218 YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            334456778899999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.97  E-value=2.2e-31  Score=208.16  Aligned_cols=179  Identities=19%  Similarity=0.276  Sum_probs=146.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+.+|+|.+++...+.             ..+++..+..++.|++.||.|||+.+++|+||+|.||+++.++.++
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~k  142 (285)
T cd05632          76 CLVLTIMNGGDLKFHIYNMGN-------------PGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIR  142 (285)
T ss_pred             EEEEEeccCccHHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEE
Confidence            378999999999999976433             4699999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc--
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK--  175 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~--  175 (223)
                      ++|||++.......  ......++..|++||.+.+..++.++|+||+|+++|+++ +|..||...........+....  
T Consensus       143 l~Dfg~~~~~~~~~--~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~-~g~~P~~~~~~~~~~~~~~~~~~~  219 (285)
T cd05632         143 ISDLGLAVKIPEGE--SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMI-EGQSPFRGRKEKVKREEVDRRVLE  219 (285)
T ss_pred             EecCCcceecCCCC--cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHhhhc
Confidence            99999886432221  123346788999999998888999999999999999999 7999998776554433332211  


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                      .........+.++.+++..||+.+|++||+     +++++.+
T Consensus       220 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         220 TEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             cccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            122334567888999999999999999999     6677765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.97  E-value=4.7e-31  Score=203.55  Aligned_cols=181  Identities=17%  Similarity=0.264  Sum_probs=152.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh-----cCCcccCCCCCCCeeeec
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS-----DKRLIHKDIAARNCLISS   92 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~i~H~di~~~nil~~~   92 (223)
                      .+++||+.+++|.+++.....           ...++++..++.++.|++.|+.+||     +.+++|+||+|.||+++.
T Consensus        77 ~~~~e~~~~~~L~~~l~~~~~-----------~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~  145 (265)
T cd08217          77 YIVMEYCEGGDLAQLIQKCKK-----------ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA  145 (265)
T ss_pred             EEEehhccCCCHHHHHHHHhh-----------cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec
Confidence            478999999999999986532           2356999999999999999999999     899999999999999999


Q ss_pred             CCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         93 DLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        93 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      ++.++++|||++......... .....++..|++||.+....++.++|+||||+++++++ +|..||...+.......+.
T Consensus       146 ~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~~~~~~~~~  223 (265)
T cd08217         146 NNNVKLGDFGLAKILGHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELC-ALSPPFTARNQLQLASKIK  223 (265)
T ss_pred             CCCEEEecccccccccCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHH-HCCCcccCcCHHHHHHHHh
Confidence            999999999988765433211 22345678899999998888899999999999999999 7999998887666666655


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .. .....+...+..+.+++.+|++.+|++||++++++++
T Consensus       224 ~~-~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         224 EG-KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             cC-CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            54 3334456778999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.97  E-value=2.7e-31  Score=208.35  Aligned_cols=179  Identities=18%  Similarity=0.273  Sum_probs=146.0

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ...+++||+++++|.+++..                ..+++..+..++.||+.|+.|||+.+++|+||+|.||+++.++.
T Consensus        93 ~~~lv~e~~~~~~L~~~~~~----------------~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~  156 (292)
T cd06658          93 ELWVVMEFLEGGALTDIVTH----------------TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR  156 (292)
T ss_pred             eEEEEEeCCCCCcHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC
Confidence            35589999999999999853                24899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++++|||++....... .......++..|+|||......++.++|+||+|+++++++ +|..||...........+....
T Consensus       157 ~kL~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~-~g~~p~~~~~~~~~~~~~~~~~  234 (292)
T cd06658         157 IKLSDFGFCAQVSKEV-PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI-DGEPPYFNEPPLQAMRRIRDNL  234 (292)
T ss_pred             EEEccCcchhhccccc-ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhcC
Confidence            9999999886432211 1122345678899999998888899999999999999999 7999998877666555544321


Q ss_pred             -ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 -LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 -~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       .........+..+.+++.+||..+|.+||++++++++
T Consensus       235 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         235 PPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             CCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence             1112223567889999999999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.97  E-value=5.1e-31  Score=205.23  Aligned_cols=177  Identities=21%  Similarity=0.275  Sum_probs=146.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+++|.+++..                ..+++..+..++.|+++|+.|||+++++|+||+|+||+++.++.+
T Consensus        77 ~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~  140 (277)
T cd06642          77 LWIIMEYLGGGSALDLLKP----------------GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDV  140 (277)
T ss_pred             eEEEEEccCCCcHHHHhhc----------------CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCE
Confidence            5589999999999999853                358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|++||.+.+..++.++|+||||+++++++ +|..|+...........+... .
T Consensus       141 ~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~-tg~~p~~~~~~~~~~~~~~~~-~  217 (277)
T cd06642         141 KLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELA-KGEPPNSDLHPMRVLFLIPKN-S  217 (277)
T ss_pred             EEccccccccccCcc-hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHH-hCCCCCcccchhhHHhhhhcC-C
Confidence            999999886543221 1122345677899999998888899999999999999999 799999876665555444333 2


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ........+.++.+++.+||+.+|.+||++.+++.+
T Consensus       218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         218 PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            233345678889999999999999999999999986

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.97  E-value=6.9e-31  Score=205.99  Aligned_cols=180  Identities=19%  Similarity=0.290  Sum_probs=144.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+++|..++.+...              .+++..+..++.|++.|+.|||+.+++|+|++|.||+++.++.+
T Consensus        84 ~~lv~e~~~~~~l~~~~~~~~~--------------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~  149 (292)
T cd06644          84 LWIMIEFCPGGAVDAIMLELDR--------------GLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDI  149 (292)
T ss_pred             EEEEEecCCCCcHHHHHHhhcC--------------CCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCE
Confidence            4488999999999998875432              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||++....... .......++..|++||.+.     ...++.++|+||||+++|+|+ +|..||...........+
T Consensus       150 kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~-~g~~p~~~~~~~~~~~~~  227 (292)
T cd06644         150 KLADFGVSAKNVKTL-QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA-QIEPPHHELNPMRVLLKI  227 (292)
T ss_pred             EEccCccceeccccc-cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHh-cCCCCCccccHHHHHHHH
Confidence            999999876432211 1122345677899999874     344678899999999999999 799999877765555554


Q ss_pred             HhCcc-cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKL-CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..... ....+..++.++.+++.+||+.+|++||++++++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         228 AKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             hcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            43322 223345677889999999999999999999999875

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.7e-31  Score=210.50  Aligned_cols=182  Identities=19%  Similarity=0.231  Sum_probs=149.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.+++.....             ..+++..+..++.|+++||.|||+.|++|+||||+||+++.++.+
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~-------------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~  142 (316)
T cd05574          76 LCLVMDYCPGGELFRLLQRQPG-------------KCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHI  142 (316)
T ss_pred             EEEEEEecCCCCHHHHHHhCCC-------------CccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCE
Confidence            3478999999999999975432             468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh----------------------------hhhhcCCcccccccccccccCCCCcccchHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEY----------------------------YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLI  148 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il  148 (223)
                      +++|||++........                            ...+...++..|++||.+.+..++.++|+||||+++
T Consensus       143 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll  222 (316)
T cd05574         143 MLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILL  222 (316)
T ss_pred             EEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHH
Confidence            9999998764321110                            011123567789999999888889999999999999


Q ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCC----HHHHHHH
Q psy15108        149 WEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT----FPSIVTQ  212 (223)
Q Consensus       149 ~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~~  212 (223)
                      |+++ +|..||.+.+.......+.......+.....+..+.+++.+||..+|++||+    +++++.+
T Consensus       223 ~~l~-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         223 YEML-YGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             HHHh-hCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            9999 7999998888777666666554444444447899999999999999999999    7777765

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.1e-31  Score=212.49  Aligned_cols=181  Identities=15%  Similarity=0.193  Sum_probs=144.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+              ..+++..+..++.||+.||.|||+++++||||||.||+++.++.+
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~--------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~  141 (331)
T cd05597          76 LYLVMDYYVGGDLLTLLSKFE--------------DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHI  141 (331)
T ss_pred             EEEEEecCCCCcHHHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCE
Confidence            348899999999999997643              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-----DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||++...............+++.|+|||.+..     ..++.++|+||+||++|+|+ +|..||......+....+
T Consensus       142 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~-~g~~Pf~~~~~~~~~~~i  220 (331)
T cd05597         142 RLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKI  220 (331)
T ss_pred             EEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHh-hCCCCCCCCCHHHHHHHH
Confidence            999999986543322212223457889999999863     34678999999999999999 799999888777766666


Q ss_pred             HhCcccCCC---CCCChHHHHHHHHHhcCCCCC--CCCCHHHHHHH
Q psy15108        172 ESKKLCWKH---SSKTPEYITSLHEKCIHPHPH--QRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~--~Rps~~~ll~~  212 (223)
                      .........   ....++.+++++.+|+..+++  .|+++++++.|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         221 MNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             HcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            543322222   234688999999998865333  37899999877

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.5e-31  Score=203.15  Aligned_cols=180  Identities=22%  Similarity=0.260  Sum_probs=145.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.++++...              .++++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.+
T Consensus        75 ~~l~~e~~~~~~l~~~~~~~~--------------~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~  140 (262)
T cd06613          75 LWIVMEYCGGGSLQDIYQVTR--------------GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDV  140 (262)
T ss_pred             EEEEEeCCCCCcHHHHHHhhc--------------cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCE
Confidence            347899999999999998652              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD---EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +++|||++....... .......++..|++||.+...   .++.++|+||+|+++++|+ +|..||...........+..
T Consensus       141 ~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~-tg~~p~~~~~~~~~~~~~~~  218 (262)
T cd06613         141 KLADFGVSAQLTATI-AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELA-ELQPPMFDLHPMRALFLISK  218 (262)
T ss_pred             EECccccchhhhhhh-hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHh
Confidence            999999886543221 112334567789999998766   7888999999999999999 79999988776655544443


Q ss_pred             CcccC---CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCW---KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....   ......+.++.+++.+||..+|.+||++.+++.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         219 SNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             ccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            32222   1233456789999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.97  E-value=4e-31  Score=204.12  Aligned_cols=178  Identities=16%  Similarity=0.196  Sum_probs=149.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++....               .+++..+..++.|+++|+.|||+.+++|+||+|+||+++.++.+
T Consensus        68 ~~lv~e~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~  132 (262)
T cd05572          68 IYMLMEYCLGGELWTILRDRG---------------LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYV  132 (262)
T ss_pred             cEEEEecCCCCcHHHHHhhcC---------------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCE
Confidence            448899999999999997643               38999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS--DDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~--~~~~~~~~~~~  174 (223)
                      +++|||.+.......  ......++..|++||.+....++.++|+|++|+++|+++ +|..||....  .......+...
T Consensus       133 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~  209 (262)
T cd05572         133 KLVDFGFAKKLKSGQ--KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELL-TGRPPFGEDDEDPMEIYNDILKG  209 (262)
T ss_pred             EEeeCCcccccCccc--ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHH-hCCCCcCCCCCCHHHHHHHHhcc
Confidence            999999887654332  122345677899999988888899999999999999999 7999998776  55556655543


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                      ......+...+.++.+++.+||+.+|.+||+     ++|++++
T Consensus       210 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~  252 (262)
T cd05572         210 NGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH  252 (262)
T ss_pred             CCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence            3445555666889999999999999999999     7887764

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=1.9e-31  Score=210.21  Aligned_cols=179  Identities=21%  Similarity=0.333  Sum_probs=135.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+ +++|.+++..+.              ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.+
T Consensus        78 ~~lv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~  142 (303)
T cd07869          78 LTLVFEYV-HTDLCQYMDKHP--------------GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGEL  142 (303)
T ss_pred             EEEEEECC-CcCHHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCE
Confidence            33788988 478888887643              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~~~~~~  174 (223)
                      +++|||++....... .......++..|+|||.+.+. .++.++|+||+||++|+|+ +|..||.+.... .....+...
T Consensus       143 kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~  220 (303)
T cd07869         143 KLADFGLARAKSVPS-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMI-QGVAAFPGMKDIQDQLERIFLV  220 (303)
T ss_pred             EECCCCcceeccCCC-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCccHHHHHHHHHHH
Confidence            999999886432211 112334567889999987653 4788999999999999999 799999875432 222221110


Q ss_pred             --cc---cC----------------CC---------CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 --KL---CW----------------KH---------SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 --~~---~~----------------~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                        ..   .+                ..         ....++.+.+++.+||+.||++|||++++++|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h  288 (303)
T cd07869         221 LGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH  288 (303)
T ss_pred             hCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence              00   00                00         01234678899999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0663|consensus

Probab=99.97  E-value=1.4e-31  Score=202.84  Aligned_cols=180  Identities=21%  Similarity=0.290  Sum_probs=144.8

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ++.+|||||++ +|..+|..-+.              +|+..++..++.|+++|++|||.+.|+|||+|++|+|+...|.
T Consensus       151 ~iy~VMe~~Eh-DLksl~d~m~q--------------~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~  215 (419)
T KOG0663|consen  151 KIYIVMEYVEH-DLKSLMETMKQ--------------PFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGI  215 (419)
T ss_pred             eeeeeHHHHHh-hHHHHHHhccC--------------CCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCc
Confidence            35588888875 78888876543              6999999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +|++|||+|+..++. .......+.|.+|.|||.+.+.+ |+.+.|+||+|||+.|++ .++.-|.+......+..|..-
T Consensus       216 lKiaDFGLAR~ygsp-~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l-~~kPlf~G~sE~dQl~~If~l  293 (419)
T KOG0663|consen  216 LKIADFGLAREYGSP-LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELL-TQKPLFPGKSEIDQLDKIFKL  293 (419)
T ss_pred             EEecccchhhhhcCC-cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHH-hcCCCCCCCchHHHHHHHHHH
Confidence            999999999976654 23345667899999999988765 899999999999999999 788888877765544443320


Q ss_pred             c-----ccCC------------------------CC-CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 K-----LCWK------------------------HS-SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~-----~~~~------------------------~~-~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      -     -.|+                        .. ...++.-.+++..++.+||.+|.|+++.++|
T Consensus       294 lGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  294 LGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             hCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence            0     0000                        00 1134677899999999999999999999875

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.4e-31  Score=204.37  Aligned_cols=182  Identities=18%  Similarity=0.259  Sum_probs=145.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+.+++|.+++.....           .+..+++..+..++.|+++|+.|||+.+++|+||+|+||+++.++.++
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~  153 (275)
T cd06608          85 WLVMELCGGGSVTDLVKGLRK-----------KGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVK  153 (275)
T ss_pred             EEEEEcCCCCcHHHHHHHHhh-----------cCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEE
Confidence            488999999999999976441           124689999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-----DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      ++|||++....... .......++..|+|||.+..     ..++.++|+||+|+++++++ +|..||...........+.
T Consensus       154 l~d~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~~~~~~~~~  231 (275)
T cd06608         154 LVDFGVSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELA-DGKPPLCDMHPMRALFKIP  231 (275)
T ss_pred             ECCCccceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHH-hCCCCccccchHHHHHHhh
Confidence            99999886543222 12233456778999998753     34677899999999999999 7999998766655555544


Q ss_pred             hCcc-cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKL-CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .... ....+...+.++.+++.+||..||++|||+.+++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         232 RNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             ccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            4322 222233467889999999999999999999999864

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=4.2e-31  Score=214.80  Aligned_cols=177  Identities=18%  Similarity=0.221  Sum_probs=133.8

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++++++ +++|.+++...+               .+++..++.++.||+.||.|||+.|++||||||.||+++.++.++|
T Consensus       160 lv~e~~-~~~L~~~l~~~~---------------~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL  223 (391)
T PHA03212        160 LILPRY-KTDLYCYLAAKR---------------NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCL  223 (391)
T ss_pred             EEEecC-CCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEE
Confidence            667776 579999987643               4899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHH
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-------DQVLSQL  171 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-------~~~~~~~  171 (223)
                      +|||++...............+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||.....       ...+..+
T Consensus       224 ~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell-tg~~p~~~~~~~~~~~~~~~~l~~i  302 (391)
T PHA03212        224 GDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMA-TCHDSLFEKDGLDGDCDSDRQIKLI  302 (391)
T ss_pred             EeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHH-HCCCCcCCcccccccCchhHHHHHH
Confidence            999998643322211223456889999999998888999999999999999999 67766543210       0001000


Q ss_pred             --------------------------HhCccc-------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 --------------------------ESKKLC-------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 --------------------------~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                                ......       +......+.++.+++.+||+.||.+|||++|++++
T Consensus       303 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h  376 (391)
T PHA03212        303 IRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF  376 (391)
T ss_pred             HHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence                                      000000       00011345678999999999999999999999875

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.97  E-value=4.1e-31  Score=204.42  Aligned_cols=177  Identities=15%  Similarity=0.222  Sum_probs=144.6

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +++||+++++|.+++...+               .+++..++.++.|++.||.+||+.+++|+||+|+||+++.++.+++
T Consensus        83 ~v~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l  147 (265)
T cd06652          83 IFMEHMPGGSIKDQLKSYG---------------ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKL  147 (265)
T ss_pred             EEEEecCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEE
Confidence            6889999999999998643               4899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhh--hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         99 SLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        99 ~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +|||++........  .......++..|++||...+..++.++|+||||+++|+++ +|..||.................
T Consensus       148 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~-~g~~p~~~~~~~~~~~~~~~~~~  226 (265)
T cd06652         148 GDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEML-TEKPPWAEFEAMAAIFKIATQPT  226 (265)
T ss_pred             CcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHh-hCCCCCCccchHHHHHHHhcCCC
Confidence            99998865322110  0112234677899999988888899999999999999999 79999987766555555444433


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+..+...+..+.+++.+|+. +|++||++++++++
T Consensus       227 ~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         227 NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence            444455667888999999995 99999999999865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.5e-31  Score=204.88  Aligned_cols=180  Identities=22%  Similarity=0.296  Sum_probs=147.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+++|.+++...+.              .+++..+..++.|++.|+.|||+.+++|+|++|.||+++.++.+
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~~--------------~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~  142 (280)
T cd06611          77 LWILIEFCDGGALDSIMLELER--------------GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDV  142 (280)
T ss_pred             EEEEeeccCCCcHHHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCE
Confidence            4488999999999999986533              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||++........ ......++..|++||.+.     ...++.++|+||+|+++|+++ +|..||...........+
T Consensus       143 ~l~d~g~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~-~g~~p~~~~~~~~~~~~~  220 (280)
T cd06611         143 KLADFGVSAKNKSTLQ-KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELA-QMEPPHHELNPMRVLLKI  220 (280)
T ss_pred             EEccCccchhhccccc-ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHH-hCCCCcccCCHHHHHHHH
Confidence            9999998764332211 122345677899999874     334677899999999999999 799999888776666555


Q ss_pred             HhCcc-cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKL-CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..... ....+..++.++.+++..||+.+|.+||++.+++++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         221 LKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             hcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            44322 223345678899999999999999999999999876

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4.5e-31  Score=203.59  Aligned_cols=174  Identities=21%  Similarity=0.289  Sum_probs=145.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.++++..+               ++++..+..++.|+++||.|||+.+++|+||+|.||+++.++.+
T Consensus        72 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~  136 (260)
T cd05611          72 LYLVMEYLNGGDCASLIKTLG---------------GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHL  136 (260)
T ss_pred             EEEEEeccCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcE
Confidence            348899999999999997643               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++.....     .....++..|++||...+..++.++|+||+|+++|+++ +|..||...........+.....
T Consensus       137 ~l~dfg~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~  210 (260)
T cd05611         137 KLTDFGLSRNGLE-----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFL-FGYPPFHAETPDAVFDNILSRRI  210 (260)
T ss_pred             EEeecccceeccc-----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHhccc
Confidence            9999998864322     22345677899999988877899999999999999999 79999988887777666655433


Q ss_pred             cCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHH
Q psy15108        177 CWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVT  211 (223)
Q Consensus       177 ~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  211 (223)
                      .++  ....++.++.+++.+||+.+|++||++.++.+
T Consensus       211 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~  247 (260)
T cd05611         211 NWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQE  247 (260)
T ss_pred             CCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence            332  23357899999999999999999997654433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.97  E-value=7.7e-31  Score=206.98  Aligned_cols=182  Identities=18%  Similarity=0.255  Sum_probs=146.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      -+++||+++++|.++++..+               .+++..+..++.|+++|+.|||+.+++|+||+|.||+++.++.++
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~  141 (305)
T cd05609          77 CMVMEYVEGGDCATLLKNIG---------------ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIK  141 (305)
T ss_pred             EEEEecCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEE
Confidence            38899999999999997653               489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchh--------------hhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q psy15108         98 ISLSGLSKDTYQK--------------EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS  163 (223)
Q Consensus        98 l~df~~~~~~~~~--------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~  163 (223)
                      ++|||+++.....              .........++..|++||.+....++.++|+||||+++|+++ +|..||.+..
T Consensus       142 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~-~g~~pf~~~~  220 (305)
T cd05609         142 LTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFL-VGCVPFFGDT  220 (305)
T ss_pred             EeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCC
Confidence            9999987631100              000111234567899999988888899999999999999999 7999998887


Q ss_pred             HHHHHHHHHhCcccCCC-CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        164 DDQVLSQLESKKLCWKH-SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       164 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ..+............+. ...++.++.+++.+||+.+|++||++.++.+.|+.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         221 PEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             HHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            77777766654333322 23578899999999999999999996555554443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.97  E-value=7.1e-31  Score=206.40  Aligned_cols=178  Identities=17%  Similarity=0.280  Sum_probs=147.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+++|.+++..                ..+++.++..++.+++.|+.|||+.|++|+||+|+||+++.++.+
T Consensus        91 ~~lv~e~~~~~~L~~~~~~----------------~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~  154 (296)
T cd06655          91 LFVVMEYLAGGSLTDVVTE----------------TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSV  154 (296)
T ss_pred             EEEEEEecCCCcHHHHHHh----------------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCE
Confidence            4478999999999999964                248999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC-c
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK-K  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~-~  175 (223)
                      +++|||++........ ......++..|++||.+....++.++|+||||+++|+++ +|..||...+.......+... .
T Consensus       155 kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~ll-tg~~pf~~~~~~~~~~~~~~~~~  232 (296)
T cd06655         155 KLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV-EGEPPYLNENPLRALYLIATNGT  232 (296)
T ss_pred             EEccCccchhcccccc-cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhcCC
Confidence            9999998765432221 122345677899999998888899999999999999999 799999887765555444332 2


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       233 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         233 PELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             cccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            2333455678899999999999999999999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.97  E-value=6.8e-31  Score=205.30  Aligned_cols=184  Identities=16%  Similarity=0.269  Sum_probs=144.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.+++.....           ....+++..+..++.|+++|+.|||+.+++|+|++|.||+++.++.+
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~  163 (286)
T cd06638          95 LWLVLELCNGGSVTDLVKGFLK-----------RGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGV  163 (286)
T ss_pred             EEEEEeecCCCCHHHHHHHhhc-----------cCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCE
Confidence            4588999999999999875322           22468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-----DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||++....... .......++..|++||.+..     ..++.++|+||+||++|+++ +|..||...........+
T Consensus       164 kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~-~g~~p~~~~~~~~~~~~~  241 (286)
T cd06638         164 KLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELG-DGDPPLADLHPMRALFKI  241 (286)
T ss_pred             EEccCCceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHh-cCCCCCCCCchhHHHhhc
Confidence            999999986543221 11223457788999998742     34788999999999999999 799999876654443333


Q ss_pred             HhCc-ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        172 ESKK-LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       172 ~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      .... .....+..++..+.+++.+||+.+|++||++.+++++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         242 PRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             cccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence            2221 12222344677899999999999999999999999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.97  E-value=1.5e-31  Score=213.41  Aligned_cols=181  Identities=15%  Similarity=0.200  Sum_probs=145.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..+.              .+++..+..++.|++.||.|||+.+++||||||.||+++.++.+
T Consensus        76 ~~lv~Ey~~gg~L~~~l~~~~~--------------~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~  141 (331)
T cd05624          76 LYLVMDYYVGGDLLTLLSKFED--------------RLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHI  141 (331)
T ss_pred             EEEEEeCCCCCcHHHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCE
Confidence            4489999999999999986432              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-----DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||++...............++..|+|||.+..     ..++.++|+||+|+++|+|+ +|..||...+..+....+
T Consensus       142 kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell-~g~~Pf~~~~~~~~~~~i  220 (331)
T cd05624         142 RLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKI  220 (331)
T ss_pred             EEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhh-hCCCCccCCCHHHHHHHH
Confidence            999999986543332222223467889999998865     45778999999999999999 799999988877777776


Q ss_pred             HhCcccCCCC---CCChHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q psy15108        172 ESKKLCWKHS---SKTPEYITSLHEKCIHPHPHQ--RPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~--Rps~~~ll~~  212 (223)
                      .....+.+.+   ..+++++.+++.+|+..+++.  |++++++++|
T Consensus       221 ~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         221 MNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             HcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            6543333222   346889999999999865544  4688888766

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.97  E-value=6.3e-31  Score=206.08  Aligned_cols=183  Identities=17%  Similarity=0.276  Sum_probs=145.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.++++....           ....+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.+
T Consensus        99 ~~lv~ey~~~~sL~~~~~~~~~-----------~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~  167 (291)
T cd06639          99 LWLVLELCNGGSVTELVKGLLI-----------CGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGV  167 (291)
T ss_pred             eEEEEEECCCCcHHHHHHHhhh-----------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCE
Confidence            4488999999999999975322           22468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-----CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-----EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-----~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||++........ ......++..|++||.+...     .++.++|+||+|+++|+++ +|+.||...........+
T Consensus       168 kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~-~g~~p~~~~~~~~~~~~~  245 (291)
T cd06639         168 KLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELG-DGDPPLFDMHPVKTLFKI  245 (291)
T ss_pred             EEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHh-hCCCCCCCCcHHHHHHHH
Confidence            9999998875432221 12234567789999987533     2578999999999999999 799999887765555544


Q ss_pred             HhCcc-cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKL-CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..... ....+...+..+.+++.+||+.+|++||++.+++++
T Consensus       246 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         246 PRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             hcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            43321 222234566789999999999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.1e-31  Score=204.87  Aligned_cols=175  Identities=22%  Similarity=0.291  Sum_probs=146.3

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +++||+.+++|.+++...                .+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.+++
T Consensus        76 ~v~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l  139 (274)
T cd06609          76 IIMEYCGGGSCLDLLKPG----------------KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKL  139 (274)
T ss_pred             EEEEeeCCCcHHHHHhhc----------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEE
Confidence            788999999999999753                4899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW  178 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~  178 (223)
                      +|||++....... .......++..|++||.+.+..++.++|+||||+++|+++ +|..||...+.......+.... ..
T Consensus       140 ~d~g~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~-tg~~p~~~~~~~~~~~~~~~~~-~~  216 (274)
T cd06609         140 ADFGVSGQLTSTM-SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELA-KGEPPLSDLHPMRVLFLIPKNN-PP  216 (274)
T ss_pred             cccccceeecccc-cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHH-hCCCCcccCchHHHHHHhhhcC-CC
Confidence            9999987654321 1123345667899999998888999999999999999999 7999998777666555554442 22


Q ss_pred             CCCCC-ChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        179 KHSSK-TPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       179 ~~~~~-~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..... ++.++.+++.+||..+|++||++++++++
T Consensus       217 ~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         217 SLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             CCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            22333 78889999999999999999999999865

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.97  E-value=4.5e-31  Score=205.82  Aligned_cols=176  Identities=18%  Similarity=0.273  Sum_probs=142.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++..++               .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.+
T Consensus        72 ~~lv~e~~~~~~L~~~i~~~~---------------~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~  136 (279)
T cd05633          72 LCFILDLMNGGDLHYHLSQHG---------------VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHV  136 (279)
T ss_pred             EEEEEecCCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCE
Confidence            448899999999999997653               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD--QVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~--~~~~~~~~  173 (223)
                      +++|||++.......   .....++..|++||... +..++.++|+||+||++++++ +|..||......  ........
T Consensus       137 ~l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~-~g~~pf~~~~~~~~~~~~~~~~  212 (279)
T cd05633         137 RISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLL-RGHSPFRQHKTKDKHEIDRMTL  212 (279)
T ss_pred             EEccCCcceeccccC---ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHH-hCCCCcCCCCCcCHHHHHHHhh
Confidence            999999886443221   12345778899999876 355788999999999999999 799999754321  12222111


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                      . .....+..++.++.+++.+||..||.+||     +++++++|
T Consensus       213 ~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         213 T-VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             c-CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            1 23344567889999999999999999999     59998876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.97  E-value=5.9e-31  Score=204.89  Aligned_cols=177  Identities=21%  Similarity=0.277  Sum_probs=147.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++..                .++++.++..++.|++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        77 ~~lv~e~~~~~~L~~~i~~----------------~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~  140 (277)
T cd06640          77 LWIIMEYLGGGSALDLLRA----------------GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDV  140 (277)
T ss_pred             EEEEEecCCCCcHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCE
Confidence            4488999999999999964                248899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++........ ......++..|++||.+.+..++.++|+||||+++|+|+ +|..||...........+... .
T Consensus       141 ~l~dfg~~~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~-tg~~p~~~~~~~~~~~~~~~~-~  217 (277)
T cd06640         141 KLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELA-KGEPPNSDMHPMRVLFLIPKN-N  217 (277)
T ss_pred             EEcccccceeccCCcc-ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHH-HCCCCCCCcChHhHhhhhhcC-C
Confidence            9999998865432221 122335677899999998888899999999999999999 799999887766655544333 2


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+.....++..+.+++.+||+.+|++||++++++.+
T Consensus       218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         218 PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            334445678889999999999999999999999877

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.97  E-value=5.9e-31  Score=205.26  Aligned_cols=185  Identities=24%  Similarity=0.383  Sum_probs=146.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++.....              .+++..++.++.|++.||.|||+.|++|+||+|.||+++.++.+
T Consensus        83 ~~lv~e~~~~~~l~~~l~~~~~--------------~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~  148 (284)
T cd05038          83 LRLIMEYLPSGSLRDYLQRHRD--------------QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLV  148 (284)
T ss_pred             eEEEEecCCCCCHHHHHHhCcc--------------ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCE
Confidence            4488999999999999986532              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh--hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--------
Q psy15108         97 KISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ--------  166 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~--------  166 (223)
                      +++|||++........  ........+..|.+||......++.++|+||||+++++++ +|..|+.......        
T Consensus       149 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~-tg~~p~~~~~~~~~~~~~~~~  227 (284)
T cd05038         149 KISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELF-TYGDPSQSPPAEFLRMIGIAQ  227 (284)
T ss_pred             EEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheee-ccCCCcccccchhcccccccc
Confidence            9999999876542211  1111234456689999988888899999999999999999 6877875432211        


Q ss_pred             ------HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        167 ------VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       167 ------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                            ..............+..++.++.+++.+||+.+|++||++.++++.|.++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         228 GQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             ccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence                  11122222234444566788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=6.7e-31  Score=211.82  Aligned_cols=174  Identities=16%  Similarity=0.267  Sum_probs=135.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+.+ +|.+.+..                 .+++..+..++.|+++||.|||+.|++||||||+||+++.++.++
T Consensus       102 ~lv~e~~~~-~l~~~~~~-----------------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~k  163 (359)
T cd07876         102 YLVMELMDA-NLCQVIHM-----------------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK  163 (359)
T ss_pred             EEEEeCCCc-CHHHHHhc-----------------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEE
Confidence            477888864 67666642                 488999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh----
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES----  173 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~----  173 (223)
                      ++|||++.......  ......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||.+.+....+..+..    
T Consensus       164 l~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~-tg~~pf~~~~~~~~~~~~~~~~~~  240 (359)
T cd07876         164 ILDFGLARTACTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV-KGSVIFQGTDHIDQWNKVIEQLGT  240 (359)
T ss_pred             EecCCCccccccCc--cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHhcCC
Confidence            99999986533221  123346678899999998888999999999999999999 79999987654332221111    


Q ss_pred             ------------------CcccC------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 ------------------KKLCW------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ------------------~~~~~------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                        .....                  ......++++++++.+||..||++|||++|+++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         241 PSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             CcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence                              00000                  0011235678999999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.97  E-value=6.4e-31  Score=202.12  Aligned_cols=178  Identities=20%  Similarity=0.324  Sum_probs=145.4

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +++||+.+++|.+++...+              ..+++..+..++.|+++|+.|||+.+++|+|++|.||+++.++.+++
T Consensus        75 l~~e~~~~~~L~~~l~~~~--------------~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l  140 (256)
T cd06612          75 IVMEYCGAGSVSDIMKITN--------------KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKL  140 (256)
T ss_pred             EEEecCCCCcHHHHHHhCc--------------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEE
Confidence            7899999999999997643              36899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc-cc
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK-LC  177 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~-~~  177 (223)
                      +|||++........ ......++..|++||.+.+..++.++|+||+|+++++|+ +|..||...........+.... ..
T Consensus       141 ~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~  218 (256)
T cd06612         141 ADFGVSGQLTDTMA-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMA-EGKPPYSDIHPMRAIFMIPNKPPPT  218 (256)
T ss_pred             cccccchhcccCcc-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHH-hCCCCCCCcchhhhhhhhccCCCCC
Confidence            99998875433221 122334667899999998888899999999999999999 7999998776655444433221 12


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+..++.++.+++.+||+.+|++||++++++.+
T Consensus       219 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         219 LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence            22334567889999999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=5.7e-31  Score=212.58  Aligned_cols=174  Identities=17%  Similarity=0.250  Sum_probs=138.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+. ++|.+++..                 .+++..+..++.|++.||.|||++|++||||||.||+++.++.++
T Consensus       105 ~lv~e~~~-~~l~~~~~~-----------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k  166 (364)
T cd07875         105 YIVMELMD-ANLCQVIQM-----------------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK  166 (364)
T ss_pred             EEEEeCCC-CCHHHHHHh-----------------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEE
Confidence            37888886 577777752                 378999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++.......  ......++..|+|||.+.+..++.++|+||+||++|+|+ +|+.||.+.+.......+......
T Consensus       167 L~DfG~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~~~~~~~~  243 (364)
T cd07875         167 ILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT  243 (364)
T ss_pred             EEeCCCccccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHhcCC
Confidence            99999987543321  123346788899999998888999999999999999999 799999877765544433221000


Q ss_pred             ----------------------------------------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 ----------------------------------------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ----------------------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                                              .......+..+.+++.+|++.||.+|||+.++++|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             CCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                                                    00001124568899999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=6.6e-31  Score=211.52  Aligned_cols=174  Identities=16%  Similarity=0.250  Sum_probs=136.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++|||+.+ +|.+.+..                 .+++..+..++.|+++||.|||+.|++||||||+||+++.++.++
T Consensus        98 ~lv~e~~~~-~l~~~~~~-----------------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~k  159 (355)
T cd07874          98 YLVMELMDA-NLCQVIQM-----------------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK  159 (355)
T ss_pred             EEEhhhhcc-cHHHHHhh-----------------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEE
Confidence            378888864 67777742                 488999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC---
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK---  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~---  174 (223)
                      ++|||++.......  ......++..|+|||.+.+..++.++|+||+||++|+|+ +|..||.+.+.......+...   
T Consensus       160 l~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~~~~~~~~~  236 (355)
T cd07874         160 ILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT  236 (355)
T ss_pred             EeeCcccccCCCcc--ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHhCC
Confidence            99999987543321  123346788899999998888999999999999999999 799999877644332221110   


Q ss_pred             -------------------ccc------------------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 -------------------KLC------------------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 -------------------~~~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                         ...                  .......+.++++++.+||+.||++|||+.|+++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             CCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence                               000                  00011234678999999999999999999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0032|consensus

Probab=99.97  E-value=5.2e-31  Score=211.11  Aligned_cols=178  Identities=14%  Similarity=0.181  Sum_probs=157.8

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC--
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD--   93 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~--   93 (223)
                      ...+|||+|.||+|.+.|...                .+++..+..++.|++.++.|||+.|++|||+||+|+++...  
T Consensus       110 ~~~lvmEL~~GGeLfd~i~~~----------------~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~  173 (382)
T KOG0032|consen  110 SVYLVMELCEGGELFDRIVKK----------------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDE  173 (382)
T ss_pred             eEEEEEEecCCchHHHHHHHc----------------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccC
Confidence            356999999999999999763                28999999999999999999999999999999999998644  


Q ss_pred             --CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         94 --LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        94 --~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                        +.++++|||++.....  ........|++.|+|||++....|+..+|+||+|+++|.|+ +|..||.+....+....+
T Consensus       174 ~~~~ik~~DFGla~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL-~G~~PF~~~~~~~~~~~i  250 (382)
T KOG0032|consen  174 GSGRIKLIDFGLAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILL-SGVPPFWGETEFEIFLAI  250 (382)
T ss_pred             CCCcEEEeeCCCceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHh-hCCCCCcCCChhHHHHHH
Confidence              4699999999987655  33456789999999999999999999999999999999999 899999999988888888


Q ss_pred             HhCcccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..+.+....  ...++..++++++.|+..||..|+++.++++|
T Consensus       251 ~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  251 LRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             HcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence            877654332  35678999999999999999999999999987

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.97  E-value=3.8e-31  Score=212.77  Aligned_cols=174  Identities=17%  Similarity=0.200  Sum_probs=135.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+..                   ..++..+..++.||+.||.|||+.|++|||||++||+++.++.+
T Consensus       147 ~~lv~e~~~~~~L~~~~-------------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~  207 (353)
T PLN00034        147 IQVLLEFMDGGSLEGTH-------------------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNV  207 (353)
T ss_pred             EEEEEecCCCCcccccc-------------------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCE
Confidence            34789999999986532                   35788889999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-----CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH---HH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-----EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ---VL  168 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-----~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~---~~  168 (223)
                      +|+|||++....... .......++..|++||.+...     ..+.++|||||||++|+|+ +|+.||.......   ..
T Consensus       208 kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~-~g~~pf~~~~~~~~~~~~  285 (353)
T PLN00034        208 KIADFGVSRILAQTM-DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFY-LGRFPFGVGRQGDWASLM  285 (353)
T ss_pred             EEcccccceeccccc-ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHH-hCCCCCCCCCCccHHHHH
Confidence            999999987543211 112345678899999987432     2346899999999999999 8999997433222   22


Q ss_pred             HHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..+... .....+..++.++++++.+||+.||++||++.|+++|
T Consensus       286 ~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        286 CAICMS-QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHhcc-CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            222222 2334456778999999999999999999999999987

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.97  E-value=8.3e-31  Score=202.20  Aligned_cols=182  Identities=21%  Similarity=0.313  Sum_probs=149.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+++|.++++..+               .+++..+..++.|+++||.|||+.+++|+||+|+||+++.++.+
T Consensus        68 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~  132 (265)
T cd05579          68 LYLVMEYLPGGDLASLLENVG---------------SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHL  132 (265)
T ss_pred             EEEEEecCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCE
Confidence            448899999999999998643               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh-------hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEY-------YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS  169 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~  169 (223)
                      +++|||++........       .......++..|++||.......+.++|+||+|+++++++ +|..||......+...
T Consensus       133 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~-~g~~p~~~~~~~~~~~  211 (265)
T cd05579         133 KLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFL-VGIPPFHGETPEEIFQ  211 (265)
T ss_pred             EEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHH-hCCCCCCCCCHHHHHH
Confidence            9999998765432211       0122345667899999988888889999999999999999 7999998888877777


Q ss_pred             HHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      .+......++.....+..+.+++.+||+.+|.+||++..+.+.|.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         212 NILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             HHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            776654444433345889999999999999999999955554443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.97  E-value=9.1e-31  Score=201.39  Aligned_cols=178  Identities=19%  Similarity=0.294  Sum_probs=147.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++...+               .+++..+..++.|+++|+.|||+.|++|+||+|+||+++.++.+
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~  141 (258)
T cd06632          77 LYIFLELVPGGSLAKLLKKYG---------------SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVV  141 (258)
T ss_pred             EEEEEEecCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCE
Confidence            448899999999999997643               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||.+.......  ......++..|++||.+.... ++.++|+||+|+++|+++ +|..||...........+....
T Consensus       142 kl~d~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~-~g~~pf~~~~~~~~~~~~~~~~  218 (258)
T cd06632         142 KLADFGMAKQVVEFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMA-TGKPPWSQLEGVAAVFKIGRSK  218 (258)
T ss_pred             EEccCccceeccccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHH-hCCCCcccCcHHHHHHHHHhcc
Confidence            999999876543222  123455678899999987666 889999999999999999 7999998776555554444422


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+..++..+.+++.+||+.+|.+||++.+++.+
T Consensus       219 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         219 ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence            3344456678899999999999999999999999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG1094|consensus

Probab=99.97  E-value=2.2e-31  Score=214.36  Aligned_cols=185  Identities=30%  Similarity=0.601  Sum_probs=158.6

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +++||++.|+|.+++..+..             ..+.-....+++.||++|++||.+.+++|||+.++|+|+++++++|+
T Consensus       612 mI~EYmEnGDLnqFl~ahea-------------pt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKi  678 (807)
T KOG1094|consen  612 MITEYMENGDLNQFLSAHEL-------------PTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKI  678 (807)
T ss_pred             HHHHHHhcCcHHHHHHhccC-------------cccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEe
Confidence            68999999999999998754             23566777889999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHhC--
Q psy15108         99 SLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN-KGEMPFPDLSDDQVLSQLESK--  174 (223)
Q Consensus        99 ~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~-~~~~p~~~~~~~~~~~~~~~~--  174 (223)
                      +|||+++...+..+. ..+..+.+..|+|+|.+...+++.++|+|+||+++||+++ +...||......++.+....-  
T Consensus       679 adfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~  758 (807)
T KOG1094|consen  679 ADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFR  758 (807)
T ss_pred             cCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcC
Confidence            999999876655533 3456677899999999999999999999999999999842 578899999888887775432  


Q ss_pred             ----cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        175 ----KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       175 ----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                          ..-+..|+-||.+++++|..||..|..+||+|+++..+|++.
T Consensus       759 ~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  759 DQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             CCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence                112345678999999999999999999999999999999764

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.97  E-value=2.2e-30  Score=199.00  Aligned_cols=180  Identities=19%  Similarity=0.273  Sum_probs=151.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+++++|.+++.....           ....+++..++.++.|++.|+.|||+.|++|+||+|.||+++.++.+
T Consensus        74 ~~~v~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~  142 (256)
T cd08530          74 LCIVMEYAPFGDLSKAISKRKK-----------KRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLV  142 (256)
T ss_pred             EEEEehhcCCCCHHHHHHHHHh-----------hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcE
Confidence            4488999999999999976433           22468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++......   ......++..|++||...+..++.++|+||+|+++++++ +|..||...+..+....+.... 
T Consensus       143 kl~d~g~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~-~g~~p~~~~~~~~~~~~~~~~~-  217 (256)
T cd08530         143 KIGDLGISKVLKKN---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMA-TFAPPFEARSMQDLRYKVQRGK-  217 (256)
T ss_pred             EEeeccchhhhccC---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHhcCC-
Confidence            99999988654332   122345677899999998888889999999999999999 7999999888766666655542 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+...+.++.+++.+|++.+|++||++.+++++
T Consensus       218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         218 YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            233445778899999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.97  E-value=1.1e-30  Score=204.16  Aligned_cols=178  Identities=19%  Similarity=0.273  Sum_probs=146.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+++|.+++..                .++++..+..++.|++.|+.+||+.|++|+||+|+||+++.++.+
T Consensus        91 ~~~v~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~  154 (285)
T cd06648          91 LWVVMEFLEGGALTDIVTH----------------TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRV  154 (285)
T ss_pred             EEEEEeccCCCCHHHHHHh----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcE
Confidence            4478999999999999975                248999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++........ ......++..|++||...+..++.++|+||+|+++++++ +|..||...+.......+.....
T Consensus       155 ~l~d~g~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell-~g~~p~~~~~~~~~~~~~~~~~~  232 (285)
T cd06648         155 KLSDFGFCAQVSKEVP-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMV-DGEPPYFNEPPLQAMKRIRDNLP  232 (285)
T ss_pred             EEcccccchhhccCCc-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHH-hCCCCCcCCCHHHHHHHHHhcCC
Confidence            9999998754322111 112345678899999998888899999999999999999 79999987776666666554422


Q ss_pred             c-CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 C-WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      . ......++..+.+++.+||+.+|++||++.+++++
T Consensus       233 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  269 (285)
T cd06648         233 PKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH  269 (285)
T ss_pred             CCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence            1 12223477899999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG4645|consensus

Probab=99.97  E-value=5.8e-32  Score=233.54  Aligned_cols=178  Identities=15%  Similarity=0.220  Sum_probs=153.4

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +.||||.+|+|.+++...+.               .++.....+..|++.|+.|||+.||+||||||.||+++.+|.+|+
T Consensus      1311 IFMEyC~~GsLa~ll~~gri---------------~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~ 1375 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGRI---------------EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKY 1375 (1509)
T ss_pred             HHHHHhccCcHHHHHHhcch---------------hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEe
Confidence            56999999999999986544               788888899999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhh---hhhhhcCCcccccccccccccCC---CCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHH
Q psy15108         99 SLSGLSKDTYQKE---YYKYRNAILPLRWLPYEAVFDDE---FSTKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQL  171 (223)
Q Consensus        99 ~df~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~---~~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~~~  171 (223)
                      +|||.++....+.   ....+...||+.|||||++.+..   ...++||||+||++.||+ +|+.||...+.. +++..+
T Consensus      1376 ~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~-tGkrPW~~~dne~aIMy~V 1454 (1509)
T KOG4645|consen 1376 GDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMA-TGKRPWAELDNEWAIMYHV 1454 (1509)
T ss_pred             ecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEee-cCCCchhhccchhHHHhHH
Confidence            9999998765432   23456789999999999987654   457899999999999999 899999888764 455555


Q ss_pred             HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      ..+ ..++.|..++.+-++++..|++.||+.|.++.|++++-
T Consensus      1455 ~~g-h~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1455 AAG-HKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred             hcc-CCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence            554 66777888999999999999999999999999998874

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.97  E-value=7.3e-31  Score=203.43  Aligned_cols=175  Identities=18%  Similarity=0.234  Sum_probs=141.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC-C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-S   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~-~   95 (223)
                      ..+||||+++|+|.++++...               .+++..+..++.|+++|+.|||+.|++|+||+|.||+++.++ .
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~  148 (267)
T PHA03390         84 HVLIMDYIKDGDLFDLLKKEG---------------KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDR  148 (267)
T ss_pred             eEEEEEcCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCe
Confidence            448899999999999998643               489999999999999999999999999999999999999988 8


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHh-
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV-LSQLES-  173 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~-~~~~~~-  173 (223)
                      ++++|||++......     ....++..|+|||.+.+..++.++|+||+|+++++++ +|..||........ ...+.. 
T Consensus       149 ~~l~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~  222 (267)
T PHA03390        149 IYLCDYGLCKIIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELL-TGKHPFKEDEDEELDLESLLKR  222 (267)
T ss_pred             EEEecCccceecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHH-HCCCCCCCCCcchhhHHHHHHh
Confidence            999999988654322     2235678899999998888899999999999999999 79999975543221 111111 


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCC-HHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT-FPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-~~~ll~~  212 (223)
                      ...........+..+.+++.+||+.+|.+||+ ++++++|
T Consensus       223 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        223 QQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             hcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence            11222334467899999999999999999996 6998864

>KOG0667|consensus

Probab=99.97  E-value=1.7e-31  Score=217.56  Aligned_cols=176  Identities=20%  Similarity=0.280  Sum_probs=141.0

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC--CCe
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD--LSV   96 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~--~~~   96 (223)
                      -+..++-..||+++|+.++.             .+|+...+..++.||++||.+||+.+|+|+||||+|||+...  ..+
T Consensus       264 ciVfELL~~NLYellK~n~f-------------~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~v  330 (586)
T KOG0667|consen  264 CIVFELLSTNLYELLKNNKF-------------RGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRI  330 (586)
T ss_pred             eeeehhhhhhHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCce
Confidence            34556778899999999877             789999999999999999999999999999999999999755  458


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh---
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES---  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~---  173 (223)
                      ||+|||.++.....-+    .......|.|||++.+.+|+.+.|+||||||++||+ +|..-|++.+....+..|..   
T Consensus       331 KVIDFGSSc~~~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~-tG~PLfpG~ne~DQl~~I~e~lG  405 (586)
T KOG0667|consen  331 KVIDFGSSCFESQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELF-TGEPLFPGDNEYDQLARIIEVLG  405 (586)
T ss_pred             eEEecccccccCCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHh-cCccccCCCCHHHHHHHHHHHhC
Confidence            9999999976543321    566778899999999999999999999999999999 78777777766554443322   


Q ss_pred             ------------------C-----------------------------cccCCCC-----------CCChHHHHHHHHHh
Q psy15108        174 ------------------K-----------------------------KLCWKHS-----------SKTPEYITSLHEKC  195 (223)
Q Consensus       174 ------------------~-----------------------------~~~~~~~-----------~~~~~~~~~li~~~  195 (223)
                                        .                             ......+           ......+.+++.+|
T Consensus       406 ~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~  485 (586)
T KOG0667|consen  406 LPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRC  485 (586)
T ss_pred             CCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHH
Confidence                              0                             0000001           01125678999999


Q ss_pred             cCCCCCCCCCHHHHHHH
Q psy15108        196 IHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       196 l~~dp~~Rps~~~ll~~  212 (223)
                      +..||.+|+|..+.++|
T Consensus       486 L~~dP~~R~tp~qal~H  502 (586)
T KOG0667|consen  486 LEWDPAERITPAQALNH  502 (586)
T ss_pred             hccCchhcCCHHHHhcC
Confidence            99999999999999876

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.97  E-value=8.3e-31  Score=208.75  Aligned_cols=182  Identities=19%  Similarity=0.248  Sum_probs=137.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+++|+|.+++..+..             ..+++..++.++.|++.||.|||+.+++|+||||.||+++.++.+
T Consensus        74 ~~lv~e~~~~~~l~~~~~~~~~-------------~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~  140 (327)
T cd08227          74 LWVVTSFMAYGSAKDLICTHFM-------------DGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKV  140 (327)
T ss_pred             EEEEEeccCCCcHHHHHHhhcc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcE
Confidence            3478999999999999976533             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh------hhhcCCccccccccccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYY------KYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL  168 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~  168 (223)
                      ++.||+...........      ......++..|++||.+.+  ..++.++|+||+||++++++ +|..||.........
T Consensus       141 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~  219 (327)
T cd08227         141 YLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELA-NGHVPFKDMPATQML  219 (327)
T ss_pred             EEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHH-HCCCCCCCcchhHHH
Confidence            99998754332211100      0112244567999999875  35889999999999999999 799999765543322


Q ss_pred             HHHHhCccc--------------------------------------------CCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy15108        169 SQLESKKLC--------------------------------------------WKHSSKTPEYITSLHEKCIHPHPHQRP  204 (223)
Q Consensus       169 ~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rp  204 (223)
                      .........                                            .+.....++.+.+++.+||+.||++||
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp  299 (327)
T cd08227         220 LEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARP  299 (327)
T ss_pred             HHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcC
Confidence            221111000                                            001123456789999999999999999


Q ss_pred             CHHHHHHH
Q psy15108        205 TFPSIVTQ  212 (223)
Q Consensus       205 s~~~ll~~  212 (223)
                      |+++++++
T Consensus       300 t~~ell~~  307 (327)
T cd08227         300 SASTLLNH  307 (327)
T ss_pred             CHHHHhcC
Confidence            99999875

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.97  E-value=1.3e-30  Score=206.04  Aligned_cols=177  Identities=16%  Similarity=0.254  Sum_probs=140.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+++++|.++++..+               .+++..+..++.|+++||.|||+ .+++|+||+|.||+++.++.
T Consensus        74 ~~lv~ey~~~~~L~~~l~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~  138 (308)
T cd06615          74 ISICMEHMDGGSLDQVLKKAG---------------RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGE  138 (308)
T ss_pred             EEEEeeccCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCc
Confidence            348899999999999998653               48999999999999999999997 58999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++++|||++.......   .....++..|++||.+.+..++.++|+||||+++++++ +|..||...+.......+....
T Consensus       139 ~~l~dfg~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~-~g~~p~~~~~~~~~~~~~~~~~  214 (308)
T cd06615         139 IKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMA-IGRYPIPPPDAKELEAMFGRPV  214 (308)
T ss_pred             EEEccCCCcccccccc---cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHH-hCCCCCCCcchhhHHHhhcCcc
Confidence            9999999886432211   23345678899999988888899999999999999999 7998987554333222211100


Q ss_pred             -----------------------------------ccCCCC-CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 -----------------------------------LCWKHS-SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 -----------------------------------~~~~~~-~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                                         ..+..+ ..++.++.+++.+||..+|++||++++++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         215 SEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             ccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                                               000111 1356789999999999999999999999987

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.97  E-value=8.7e-31  Score=202.42  Aligned_cols=177  Identities=18%  Similarity=0.291  Sum_probs=143.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~   95 (223)
                      ..++++|+.+++|.+++....              ..+++..+..++.|+++|+.|||+ .+++|+||+|.||+++.++.
T Consensus        74 ~~lv~e~~~~~~L~~~~~~~~--------------~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~  139 (265)
T cd06605          74 ISICMEYMDGGSLDKILKEVQ--------------GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQ  139 (265)
T ss_pred             EEEEEEecCCCcHHHHHHHcc--------------CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCC
Confidence            448889999999999998642              258999999999999999999999 99999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHH
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-----DDQVLSQ  170 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~-----~~~~~~~  170 (223)
                      ++++|||.+.......   .....++..|++||...+..++.++|+||+|+++++++ +|..||....     .......
T Consensus       140 ~~l~d~g~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~-~g~~p~~~~~~~~~~~~~~~~~  215 (265)
T cd06605         140 IKLCDFGVSGQLVNSL---AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELA-TGRFPYPPENDPPDGIFELLQY  215 (265)
T ss_pred             EEEeecccchhhHHHH---hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHH-hCCCCCCccccccccHHHHHHH
Confidence            9999999886543221   11256677899999998888999999999999999999 7898986542     2223333


Q ss_pred             HHhCcccCCCCCC-ChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        171 LESKKLCWKHSSK-TPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       171 ~~~~~~~~~~~~~-~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +... ..+..+.. ++.++.++|.+||..+|++||++.+++.+
T Consensus       216 ~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         216 IVNE-PPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             HhcC-CCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence            3332 22222333 78889999999999999999999999865

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.97  E-value=1.1e-31  Score=206.66  Aligned_cols=178  Identities=20%  Similarity=0.376  Sum_probs=142.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++++|+.+++|.+++...+               .+++..++.++.|+++||.+||+.+++|+||+|.||+++.++.++
T Consensus        74 ~~v~~~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~  138 (260)
T PF00069_consen   74 YIVMEYCPGGSLQDYLQKNK---------------PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVK  138 (260)
T ss_dssp             EEEEEEETTEBHHHHHHHHS---------------SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEE
T ss_pred             cccccccccccccccccccc---------------ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            37899999999999998443               589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHh
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS---DDQVLSQLES  173 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~---~~~~~~~~~~  173 (223)
                      ++|||.+..... .........++..|.|||.+. ...++.++|+||+|+++++|+ +|..||....   ..........
T Consensus       139 l~Dfg~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~~~~p~~~~~~~~~~~~~~~~~~  216 (260)
T PF00069_consen  139 LIDFGSSVKLSE-NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELL-TGKLPFEESNSDDQLEIIEKILK  216 (260)
T ss_dssp             ESSGTTTEESTS-TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHH-HSSSSSTTSSHHHHHHHHHHHHH
T ss_pred             cccccccccccc-ccccccccccccccccccccccccccccccccccccccccccc-ccccccccccchhhhhhhhhccc
Confidence            999999864311 111234456778899999987 777899999999999999999 7889998873   3333333322


Q ss_pred             CcccC--CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCW--KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....  ......+.++.+++..||+.||++||++++++++
T Consensus       217 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  217 RPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             THHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             ccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            21111  1112235889999999999999999999999864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=9e-31  Score=210.85  Aligned_cols=178  Identities=19%  Similarity=0.232  Sum_probs=133.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|++++ .|+|.+++....              ..+++..++.++.||+.||.|||+.|++||||||.||+++..+.++
T Consensus       133 ~lv~e~~-~~~l~~~l~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~k  197 (357)
T PHA03209        133 CMVLPHY-SSDLYTYLTKRS--------------RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVC  197 (357)
T ss_pred             EEEEEcc-CCcHHHHHHhcc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence            3677777 578999987543              3689999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH----------HH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD----------QV  167 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~----------~~  167 (223)
                      ++|||++.......  ......++..|++||.+.+..++.++|+|||||++|+|++.+..+|......          ..
T Consensus       198 l~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l  275 (357)
T PHA03209        198 IGDLGAAQFPVVAP--AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHL  275 (357)
T ss_pred             EecCccccccccCc--ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHH
Confidence            99999986432211  1123457888999999988889999999999999999996566555432211          01


Q ss_pred             HHHHHhCc---ccCC----------------------------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        168 LSQLESKK---LCWK----------------------------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       168 ~~~~~~~~---~~~~----------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+....   ...+                            .....+..+.++|.+||+.||.+|||+.|+++|
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h  351 (357)
T PHA03209        276 LKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY  351 (357)
T ss_pred             HHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence            11111000   0000                            011345566779999999999999999999876

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.9e-30  Score=207.98  Aligned_cols=172  Identities=17%  Similarity=0.265  Sum_probs=135.0

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +++++ .+++|.++++.                ..+++..+..++.|+++||.|||+.|++||||||.||+++.++.+++
T Consensus        97 ~~~~~-~~~~l~~~~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl  159 (343)
T cd07878          97 LVTNL-MGADLNNIVKC----------------QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI  159 (343)
T ss_pred             EEeec-CCCCHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEE
Confidence            44454 48999988853                35899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc-
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL-  176 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~-  176 (223)
                      +|||++......    .....++..|+|||.+.+ ..++.++||||+||++|+|+ +|..||.+.+.......+..... 
T Consensus       160 ~Dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~~~~~~~~~  234 (343)
T cd07878         160 LDFGLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-KGKALFPGNDYIDQLKRIMEVVGT  234 (343)
T ss_pred             cCCccceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHH-HCCCCCCCCCHHHHHHHHHHHhCC
Confidence            999998754322    123467888999999876 45788999999999999999 79999987665444333221000 


Q ss_pred             ----------------------cCC------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 ----------------------CWK------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ----------------------~~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                            ..+      .....++.+.+++.+|++.||.+|||+.+++.|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         235 PSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             CCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                                  000      012345668899999999999999999999976

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0579|consensus

Probab=99.97  E-value=1.2e-30  Score=212.34  Aligned_cols=178  Identities=20%  Similarity=0.322  Sum_probs=154.8

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +..|||.||-...++-.-+.              ++++.++..+++|++.||.|||+++|+|||+|+.|||++.+|.+++
T Consensus       106 iliEFC~GGAVDaimlEL~r--------------~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirL  171 (1187)
T KOG0579|consen  106 ILIEFCGGGAVDAIMLELGR--------------VLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRL  171 (1187)
T ss_pred             EEEeecCCchHhHHHHHhcc--------------ccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEee
Confidence            56799999999999876554              7999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      .|||.+...... ....-...||++|+|||++.     ..+|+.++|||||||++.+|. .+.+|....++..++-.+..
T Consensus       172 ADFGVSAKn~~t-~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMA-qiEPPHhelnpMRVllKiaK  249 (1187)
T KOG0579|consen  172 ADFGVSAKNKST-RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMA-QIEPPHHELNPMRVLLKIAK  249 (1187)
T ss_pred             ecccccccchhH-HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHh-ccCCCccccchHHHHHHHhh
Confidence            999988654332 23345689999999999853     678999999999999999999 89999999998877766654


Q ss_pred             -CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 -KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 -~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       .++.+..|...+..+.+++..||..||..||+++++++|
T Consensus       250 SePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  250 SEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             cCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence             444556677889999999999999999999999999876

>KOG0690|consensus

Probab=99.97  E-value=1.5e-31  Score=202.43  Aligned_cols=182  Identities=15%  Similarity=0.229  Sum_probs=158.3

Q ss_pred             cCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee
Q psy15108         12 KDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS   91 (223)
Q Consensus        12 ~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~   91 (223)
                      +..+..-+||||..||.|.-.|...+.               |+++....+..+|+.||.|||+++|++||+|..|.+++
T Consensus       238 Qt~drlCFVMeyanGGeLf~HLsrer~---------------FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLD  302 (516)
T KOG0690|consen  238 QTQDRLCFVMEYANGGELFFHLSRERV---------------FSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLD  302 (516)
T ss_pred             ccCceEEEEEEEccCceEeeehhhhhc---------------ccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheec
Confidence            344445589999999999999987655               99999999999999999999999999999999999999


Q ss_pred             cCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         92 SDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        92 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      ++|++|+.|||+++..... ........|++.|+|||++....|..++|.|.+|+++|||+ +|++||...+.....+.|
T Consensus       303 kDGHIKitDFGLCKE~I~~-g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMm-CGRLPFyn~dh~kLFeLI  380 (516)
T KOG0690|consen  303 KDGHIKITDFGLCKEEIKY-GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMM-CGRLPFYNKDHEKLFELI  380 (516)
T ss_pred             cCCceEeeecccchhcccc-cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHH-hccCcccccchhHHHHHH
Confidence            9999999999999754332 22346688999999999999999999999999999999999 999999999999888887


Q ss_pred             HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                      .....+.  |..++++.+.++..+|..||.+|.     +++||.++
T Consensus       381 l~ed~kF--Pr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h  424 (516)
T KOG0690|consen  381 LMEDLKF--PRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH  424 (516)
T ss_pred             HhhhccC--CccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence            7654444  677899999999999999999994     35666655

>KOG0658|consensus

Probab=99.97  E-value=4.1e-31  Score=202.35  Aligned_cols=180  Identities=19%  Similarity=0.248  Sum_probs=142.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC-CCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~-~~~   96 (223)
                      .+||||++ .||++.++.--.           .+..++.-.+.-+.+||++|+.|||+.||+||||||+|+|+|.. +.+
T Consensus        98 nlVleymP-~tL~~~~r~~~~-----------~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~L  165 (364)
T KOG0658|consen   98 NLVLEYMP-ETLYRVIRHYTR-----------ANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVL  165 (364)
T ss_pred             HHHHHhch-HHHHHHHHHHhh-----------cCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeE
Confidence            37777775 589999985311           12468889999999999999999999999999999999999977 889


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh--
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES--  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~--  173 (223)
                      |++|||-|+.....+  .......+..|.|||.+.+.. |+.+.||||.||++.||+ .|+.-|++.+....+..+.+  
T Consensus       166 KicDFGSAK~L~~~e--pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl-~g~plFpG~s~~dQL~eIik~l  242 (364)
T KOG0658|consen  166 KICDFGSAKVLVKGE--PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELL-KGQPLFPGDSSVDQLVEIIKVL  242 (364)
T ss_pred             EeccCCcceeeccCC--CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHh-cCCcccCCCCHHHHHHHHHHHh
Confidence            999999998765544  224556788899999998765 899999999999999999 89999988765443332221  


Q ss_pred             ----------Ccc-------------cC--CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 ----------KKL-------------CW--KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ----------~~~-------------~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                ...             .|  ......+++..+++.++++++|.+|.++.+++.|
T Consensus       243 G~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  243 GTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             CCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence                      000             01  1234567889999999999999999999999876

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.97  E-value=1.6e-30  Score=203.69  Aligned_cols=174  Identities=21%  Similarity=0.203  Sum_probs=147.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.+++...+               .+++..+..++.|+++||.|||+.|++|+||+|.||+++.++.+
T Consensus        76 ~~~v~e~~~~~~L~~~~~~~~---------------~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~  140 (290)
T cd05580          76 LYLVMEYVPGGELFSHLRKSG---------------RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYI  140 (290)
T ss_pred             EEEEEecCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCE
Confidence            337899999999999998653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++......    .....+++.|++||.+.....+.++|+||||+++++|+ +|..||...........+.... 
T Consensus       141 kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~-  214 (290)
T cd05580         141 KITDFGFAKRVKGR----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEML-AGYPPFFDDNPIQIYEKILEGK-  214 (290)
T ss_pred             EEeeCCCccccCCC----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHhcCC-
Confidence            99999998754332    23345678899999988778889999999999999999 7999998877666666655432 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                       ...+...+..+.+++.+||..+|.+|+     ++++++.+
T Consensus       215 -~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         215 -VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             -ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence             344566788999999999999999999     77888755

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.97  E-value=1.8e-30  Score=201.45  Aligned_cols=180  Identities=22%  Similarity=0.292  Sum_probs=143.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+++|+|.+++...+               .+++..+..++.|++.|+.+||+.+++|+||+|.||+++.++.+
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~  147 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTYG---------------RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGIC  147 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhcc---------------CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeE
Confidence            458899999999999997653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCC--CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~--~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +++|||++....... ........++..|++||......  ++.++|+||+|+++++++ +|..||......+....+..
T Consensus       148 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~-~g~~p~~~~~~~~~~~~~~~  226 (272)
T cd06629         148 KISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMF-AGRRPWSDEEAIAAMFKLGN  226 (272)
T ss_pred             EEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHH-hCCCCCcCcchHHHHHHhhc
Confidence            999999886543211 11122345677899999987654  788999999999999999 79999976665544443322


Q ss_pred             CcccCC----CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWK----HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......    ....++.++.+++.+||+.+|.+||++++++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         227 KRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             cccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            212221    123467899999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=3.8e-31  Score=229.71  Aligned_cols=180  Identities=19%  Similarity=0.256  Sum_probs=140.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------CcccCCCCCCCee
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-------RLIHKDIAARNCL   89 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------~i~H~di~~~nil   89 (223)
                      ..+||||+.+|+|.++|.....           ....+++..++.++.||+.||.|||+.       +|+|+||||.|||
T Consensus        89 lyIVMEY~~gGSL~~lL~k~~~-----------~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNIL  157 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQKCYK-----------MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF  157 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHHHhh-----------ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeE
Confidence            4488999999999999986432           124699999999999999999999984       4999999999999


Q ss_pred             eecC-----------------CCeEEcCCCCCcccchhhhhhhhcCCccccccccccccc--CCCCcccchHHHHHHHHH
Q psy15108         90 ISSD-----------------LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYACLIWE  150 (223)
Q Consensus        90 ~~~~-----------------~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~~  150 (223)
                      ++..                 ..++|+|||++.......  ......+++.|+|||.+..  ..++.++|||||||++|+
T Consensus       158 L~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYE  235 (1021)
T PTZ00266        158 LSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYE  235 (1021)
T ss_pred             eecCccccccccccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHH
Confidence            9642                 348999999987543222  1234467899999999854  347889999999999999


Q ss_pred             HHhCCCCCCCCCCHHH-HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        151 IFNKGEMPFPDLSDDQ-VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       151 l~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      |+ +|..||....... ....+... ...+ ....+.++.+||..||..+|.+||++.+++.+
T Consensus       236 LL-TGk~PF~~~~~~~qli~~lk~~-p~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h  295 (1021)
T PTZ00266        236 LC-SGKTPFHKANNFSQLISELKRG-PDLP-IKGKSKELNILIKNLLNLSAKERPSALQCLGY  295 (1021)
T ss_pred             HH-HCCCCCCcCCcHHHHHHHHhcC-CCCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence            99 7999997665443 33333332 2222 23568889999999999999999999999854

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.97  E-value=2.5e-30  Score=202.20  Aligned_cols=180  Identities=21%  Similarity=0.308  Sum_probs=147.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.+++.....              .+++..+..++.|++.|+.|||+.|++|+|++|.||+++.++.+
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~--------------~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~  155 (286)
T cd06614          90 LWVVMEYMDGGSLTDIITQNFV--------------RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSV  155 (286)
T ss_pred             EEEEEeccCCCcHHHHHHHhcc--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCE
Confidence            4478899999999999987541              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++........ ......++..|++||.+.+..++.++|+||||+++|+++ +|..||...........+.....
T Consensus       156 ~l~d~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~-~g~~p~~~~~~~~~~~~~~~~~~  233 (286)
T cd06614         156 KLADFGFAAQLTKEKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMA-EGEPPYLREPPLRALFLITTKGI  233 (286)
T ss_pred             EECccchhhhhccchh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhcCC
Confidence            9999998754332211 122334667899999988888899999999999999999 79999988776665555444322


Q ss_pred             cC-CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CW-KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .. .....++.++.+++.+||+.+|.+||++.+++.+
T Consensus       234 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         234 PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            22 2223478899999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.97  E-value=1.5e-30  Score=204.59  Aligned_cols=178  Identities=20%  Similarity=0.272  Sum_probs=146.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++..                ..+++..++.++.|++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        93 ~~iv~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~  156 (297)
T cd06659          93 LWVLMEFLQGGALTDIVSQ----------------TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRV  156 (297)
T ss_pred             EEEEEecCCCCCHHHHHhh----------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcE
Confidence            4488999999999998854                248999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|++||.+....++.++|+||+|+++++++ +|..||......+....+.....
T Consensus       157 kL~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~-~g~~p~~~~~~~~~~~~~~~~~~  234 (297)
T cd06659         157 KLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMV-DGEPPYFSDSPVQAMKRLRDSPP  234 (297)
T ss_pred             EEeechhHhhccccc-ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHhccCC
Confidence            999999875432211 1122345678899999998888899999999999999999 79999987776666555544322


Q ss_pred             -cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 -CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       .+......+..+.+++.+||+.+|++||++++++++
T Consensus       235 ~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         235 PKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             CCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence             222334678889999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.97  E-value=1.8e-30  Score=199.70  Aligned_cols=180  Identities=21%  Similarity=0.300  Sum_probs=147.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC-
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~-   95 (223)
                      ..+++||+.+++|.+++.....             ..+++..+..++.|+++|+.|||+.+++|+|++|.||+++.++. 
T Consensus        74 ~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~  140 (257)
T cd08225          74 LFIVMEYCDGGDLMKRINRQRG-------------VLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMV  140 (257)
T ss_pred             EEEEEecCCCCcHHHHHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCe
Confidence            4588999999999999976433             35899999999999999999999999999999999999988754 


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++++|||.+....... .......++..|++||......++.++|+||+|+++++++ +|..||......+....+....
T Consensus       141 ~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~  218 (257)
T cd08225         141 AKLGDFGIARQLNDSM-ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELC-TLKHPFEGNNLHQLVLKICQGY  218 (257)
T ss_pred             EEecccccchhccCCc-ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHH-hCCCCCCCccHHHHHHHHhccc
Confidence            6999999886543321 1112335677899999988888899999999999999999 7999998777666665555442


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       ........+.++.+++.+||..+|++||++.+++++
T Consensus       219 -~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         219 -FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             -CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence             233345678899999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG4279|consensus

Probab=99.97  E-value=2.5e-31  Score=218.07  Aligned_cols=191  Identities=18%  Similarity=0.268  Sum_probs=152.3

Q ss_pred             HHHHHhhcCCC-C-CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHHhhcCCccc
Q psy15108          5 QFLLATRKDSK-D-KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSL--STSQAVTMAYQVALGLEHISDKRLIH   80 (223)
Q Consensus         5 ~~~~~~~~~~~-~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~i~H   80 (223)
                      ||.++-...++ + ....||..+||+|.++|+..=              +++  ++...-.+..||++||.|||++.|+|
T Consensus       633 NIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskW--------------GPlKDNEstm~fYtkQILeGLkYLHen~IVH  698 (1226)
T KOG4279|consen  633 NIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKW--------------GPLKDNESTMNFYTKQILEGLKYLHENKIVH  698 (1226)
T ss_pred             hHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhcc--------------CCCccchhHHHHHHHHHHHHhhhhhhcceee
Confidence            44444445333 3 447899999999999998532              245  78889999999999999999999999


Q ss_pred             CCCCCCCeeeecC-CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCC--CCcccchHHHHHHHHHHHhCCCC
Q psy15108         81 KDIAARNCLISSD-LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEM  157 (223)
Q Consensus        81 ~di~~~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~Di~slG~il~~l~~~~~~  157 (223)
                      ||||..|+++... |.+|++|||-+++...-... ..+..||..|+|||++..++  |..++|||||||++.||. +|++
T Consensus       699 RDIKGDNVLvNTySGvlKISDFGTsKRLAginP~-TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMA-TGrP  776 (1226)
T KOG4279|consen  699 RDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC-TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMA-TGRP  776 (1226)
T ss_pred             ccccCCcEEEeeccceEEecccccchhhccCCcc-ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeec-cCCC
Confidence            9999999999765 78999999998765433322 24567899999999998654  889999999999999999 8999


Q ss_pred             CCCCCC-HHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHH
Q psy15108        158 PFPDLS-DDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVT  211 (223)
Q Consensus       158 p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  211 (223)
                      ||.... +...+.++.-.+.-++.|...+.+.+.+|.+|+.+||.+||++++++.
T Consensus       777 PF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  777 PFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             CeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            997654 344444433333345667788899999999999999999999999875

>KOG4717|consensus

Probab=99.97  E-value=8.4e-31  Score=208.79  Aligned_cols=174  Identities=17%  Similarity=0.280  Sum_probs=154.4

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCee-eecCCCeE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL-ISSDLSVK   97 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil-~~~~~~~~   97 (223)
                      +|.|.-.+|+|++||-++..              .++++.+.+++.||+.|+.|+|+..++|||+||+|++ +.+-|-+|
T Consensus        94 LiLELGD~GDl~DyImKHe~--------------Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVK  159 (864)
T KOG4717|consen   94 LILELGDGGDLFDYIMKHEE--------------GLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVK  159 (864)
T ss_pred             EEEEecCCchHHHHHHhhhc--------------cccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceE
Confidence            77888899999999987654              6999999999999999999999999999999999986 45668899


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFS-TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++..+.+..  ...+..|...|-|||.+.+..|+ +++||||||||+|-+. +|+.||...+..+.+-.|+..++
T Consensus       160 LTDFGFSNkf~PG~--kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLV-CGq~PFqeANDSETLTmImDCKY  236 (864)
T KOG4717|consen  160 LTDFGFSNKFQPGK--KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLV-CGQPPFQEANDSETLTMIMDCKY  236 (864)
T ss_pred             eeeccccccCCCcc--hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHH-hCCCccccccchhhhhhhhcccc
Confidence            99999998765544  44667788899999999999987 5699999999999888 99999999999999999988765


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVT  211 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  211 (223)
                      .  +|...+.+++++|..||..||++|.+.++|..
T Consensus       237 t--vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  237 T--VPSHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             c--CchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            4  46778999999999999999999999999874

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.97  E-value=2.9e-30  Score=199.28  Aligned_cols=179  Identities=15%  Similarity=0.266  Sum_probs=142.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.+++....               .+++..+..++.++++|+.|||+.+++|+||+|.||+++.++.+
T Consensus        74 ~~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~  138 (264)
T cd06626          74 VYIFMEYCSGGTLEELLEHGR---------------ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVI  138 (264)
T ss_pred             EEEEEecCCCCcHHHHHhhcC---------------CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCE
Confidence            458899999999999997543               38899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhh---hhcCCcccccccccccccCC---CCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHH
Q psy15108         97 KISLSGLSKDTYQKEYYK---YRNAILPLRWLPYEAVFDDE---FSTKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLS  169 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~---~~~~~~~~~~~~pe~~~~~~---~~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~  169 (223)
                      +++|||.+..........   .....++..|++||.+....   .+.++|+|+||+++++++ +|..||...... ....
T Consensus       139 kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~-~g~~pf~~~~~~~~~~~  217 (264)
T cd06626         139 KLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMA-TGKRPWSELDNEFQIMF  217 (264)
T ss_pred             EEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHH-hCCCCccCCcchHHHHH
Confidence            999999887543322111   12345677899999987665   788999999999999999 799999766432 2222


Q ss_pred             HHHhCcccCCCCC--CChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        170 QLESKKLCWKHSS--KTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       170 ~~~~~~~~~~~~~--~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+... ..+..+.  ..+..+.+++.+||+.+|.+||++++++.+
T Consensus       218 ~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         218 HVGAG-HKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             HHhcC-CCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            22222 2222233  347889999999999999999999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.97  E-value=2.3e-30  Score=201.75  Aligned_cols=175  Identities=18%  Similarity=0.275  Sum_probs=142.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++...+               .+++..+..++.|+++|+.|||+.+++|+||+|+||+++.++.+
T Consensus        72 ~~~v~e~~~g~~L~~~l~~~~---------------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~  136 (278)
T cd05606          72 LSFILDLMNGGDLHYHLSQHG---------------VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHV  136 (278)
T ss_pred             EEEEEecCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCE
Confidence            347899999999999997543               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLS---DDQVLSQLE  172 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~---~~~~~~~~~  172 (223)
                      +++|||++.......   .....++..|++||.+... .++.++|+||+|+++|+++ +|..||....   .........
T Consensus       137 kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~-~g~~p~~~~~~~~~~~~~~~~~  212 (278)
T cd05606         137 RISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-RGHSPFRQHKTKDKHEIDRMTL  212 (278)
T ss_pred             EEccCcCccccCccC---CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHH-hCCCCCCCCCccchHHHHHHhh
Confidence            999999886443221   1234677889999998744 5788999999999999999 7999997663   222222222


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                      .  .....+...+.++.+++.+|+..+|.+||     ++.+++++
T Consensus       213 ~--~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         213 T--MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             c--cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence            2  22344556788999999999999999999     89999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.97  E-value=1.7e-30  Score=205.35  Aligned_cols=179  Identities=20%  Similarity=0.310  Sum_probs=139.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+ +|.+++...+.              .+++..+..++.|+++||.|||+.|++||||+|+||+++.++.+
T Consensus        79 ~~lv~e~~~~-~l~~~~~~~~~--------------~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~  143 (309)
T cd07872          79 LTLVFEYLDK-DLKQYMDDCGN--------------IMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGEL  143 (309)
T ss_pred             EEEEEeCCCC-CHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCE
Confidence            3378898874 89888876433              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .......++..|+|||.+.+ ..++.++|+||+|+++|+|+ +|..||.+.+..+....+....
T Consensus       144 kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~-tg~~pf~~~~~~~~~~~~~~~~  221 (309)
T cd07872         144 KLADFGLARAKSVPT-KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMA-SGRPLFPGSTVEDELHLIFRLL  221 (309)
T ss_pred             EECccccceecCCCc-cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHh
Confidence            999999986532221 11223456788999998765 45788999999999999999 7999998776554433332100


Q ss_pred             ---------------------cc-------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ---------------------LC-------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ---------------------~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                           ..       ......++.++.+++.+|++.||.+|||++|++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  286 (309)
T cd07872         222 GTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH  286 (309)
T ss_pred             CCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence                                 00       00112457789999999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=4.1e-30  Score=200.95  Aligned_cols=179  Identities=19%  Similarity=0.307  Sum_probs=142.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+++++|.+++.....            ...+++..+..++.|+++|+.|||+ .+++|+||+|+||+++.++.
T Consensus        74 ~~lv~e~~~~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~  141 (286)
T cd06622          74 VYMCMEYMDAGSLDKLYAGGVA------------TEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQ  141 (286)
T ss_pred             EEEEEeecCCCCHHHHHHhccc------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCC
Confidence            4588999999999999975311            1358999999999999999999996 59999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCC------CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE------FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS  169 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~------~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~  169 (223)
                      ++++|||++.......   .....++..|++||.+....      ++.++|+||+||++|+++ +|..||..........
T Consensus       142 ~~l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~~~~~~  217 (286)
T cd06622         142 VKLCDFGVSGNLVASL---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMA-LGRYPYPPETYANIFA  217 (286)
T ss_pred             EEEeecCCcccccCCc---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHH-hCCCCCCCcchhhHHH
Confidence            9999999886442221   12234667899999875433      478899999999999999 7999997665544433


Q ss_pred             HH---HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        170 QL---ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       170 ~~---~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+   ... .....+..++.++.+++.+||+.+|.+||++++++.+
T Consensus       218 ~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         218 QLSAIVDG-DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             HHHHHhhc-CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            32   222 2334455688999999999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.97  E-value=4e-30  Score=197.52  Aligned_cols=182  Identities=19%  Similarity=0.267  Sum_probs=152.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++.....           ....+++..+..++.++++|+.+||+.|++|+|++|+||+++.++.+
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~  142 (258)
T cd08215          74 LCIVMEYADGGDLSQKIKKQKK-----------EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLV  142 (258)
T ss_pred             EEEEEEecCCCcHHHHHHHhhc-----------cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcE
Confidence            3478999999999999987531           12469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|++||......++.++|+|++|+++++++ +|..||............... .
T Consensus       143 ~l~d~~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~-~g~~p~~~~~~~~~~~~~~~~-~  219 (258)
T cd08215         143 KLGDFGISKVLSSTV-DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELC-TLKHPFEGENLLELALKILKG-Q  219 (258)
T ss_pred             EECCccceeecccCc-ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHH-cCCCCCCCCcHHHHHHHHhcC-C
Confidence            999999886543322 1122345677899999988888899999999999999999 899999888776666666554 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..+.+..++..+.+++.+||..+|++||++.+++++
T Consensus       220 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         220 YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            344455788999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.97  E-value=3.1e-30  Score=200.70  Aligned_cols=179  Identities=20%  Similarity=0.312  Sum_probs=149.6

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ...++||++.+++|.+++.+.+               .+++..++.++.|++.|+.+||+.|++|+|++|.||+++.++.
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~~---------------~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~  140 (280)
T cd05581          76 NLYFVLEYAPNGELLQYIRKYG---------------SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMH  140 (280)
T ss_pred             eEEEEEcCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC
Confidence            3558999999999999998653               4999999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhh-------------------hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCC
Q psy15108         96 VKISLSGLSKDTYQKEY-------------------YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGE  156 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~-------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~  156 (223)
                      ++++|||++........                   .......++..|++||......++.++|+|++|+++++++ +|.
T Consensus       141 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~-~g~  219 (280)
T cd05581         141 IKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQML-TGK  219 (280)
T ss_pred             EEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHH-hCC
Confidence            99999998875433221                   1222345678899999988888889999999999999999 799


Q ss_pred             CCCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCH----HHHHHH
Q psy15108        157 MPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF----PSIVTQ  212 (223)
Q Consensus       157 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~~ll~~  212 (223)
                      .||...........+..  ..+..+...++.+.+++.+||+.+|.+||++    ++++++
T Consensus       220 ~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         220 PPFRGSNEYLTFQKILK--LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             CCCCCccHHHHHHHHHh--cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence            99998876666555543  3344556778899999999999999999999    787764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.97  E-value=3.3e-30  Score=198.90  Aligned_cols=178  Identities=19%  Similarity=0.244  Sum_probs=147.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+++++|.+++....               ++++..++.++.|+++|+.|||+ .+++|+||+|.||+++.++.
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~  138 (264)
T cd06623          74 ISIVLEYMDGGSLADLLKKVG---------------KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGE  138 (264)
T ss_pred             EEEEEEecCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCC
Confidence            447899999999999998653               48999999999999999999999 99999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHH
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS---DDQVLSQLE  172 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~---~~~~~~~~~  172 (223)
                      ++++|||.+......... .....++..|++||.+....++.++|+|+||+++|+++ +|..||....   ..+....+.
T Consensus       139 ~~l~df~~~~~~~~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~-tg~~p~~~~~~~~~~~~~~~~~  216 (264)
T cd06623         139 VKIADFGISKVLENTLDQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECA-LGKFPFLPPGQPSFFELMQAIC  216 (264)
T ss_pred             EEEccCccceecccCCCc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHH-hCCCCCccccccCHHHHHHHHh
Confidence            999999988754332211 12345677899999998888899999999999999999 7999997773   444455555


Q ss_pred             hCcccCCCCCC-ChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKLCWKHSSK-TPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~~~~~-~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .. .....+.. ++..+.+++.+||+.+|++||++.+++++
T Consensus       217 ~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         217 DG-PPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             cC-CCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            43 33334445 78899999999999999999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.97  E-value=2.1e-30  Score=199.66  Aligned_cols=175  Identities=17%  Similarity=0.197  Sum_probs=144.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+++|.+++....               ++++..+..++.|+++|+.|||+.+++|+||+|.||+++.++.+
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~  139 (258)
T cd05578          75 MYLVVDLLLGGDLRYHLSQKV---------------KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHV  139 (258)
T ss_pred             EEEEEeCCCCCCHHHHHHhcC---------------CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCE
Confidence            558899999999999997642               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD---DQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~---~~~~~~~~~  173 (223)
                      +++|||.+.......  ......++..|++||.+....++.++|+||+|+++|+++ +|..||.....   ...... ..
T Consensus       140 ~l~d~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~~~~~~~~~~-~~  215 (258)
T cd05578         140 HITDFNIATKVTPDT--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECL-RGKRPYRGHSRTIRDQIRAK-QE  215 (258)
T ss_pred             EEeecccccccCCCc--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHH-hCCCCCCCCCccHHHHHHHH-hc
Confidence            999999886543322  123345677899999998888899999999999999999 79999987764   232222 22


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCH--HHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF--PSIVT  211 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~--~~ll~  211 (223)
                      . .....+...+..+.+++.+||+.||.+||++  +++++
T Consensus       216 ~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         216 T-ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             c-ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence            1 3344556788999999999999999999999  66654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.97  E-value=3.1e-30  Score=199.38  Aligned_cols=183  Identities=20%  Similarity=0.253  Sum_probs=146.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++++.+++|.+++.....            ...+++..+..++.|++.|+.+||+.|++|+|++|+||+++.++.+
T Consensus        74 ~~iv~e~~~~~~l~~~~~~~~~------------~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~  141 (267)
T cd06610          74 LWLVMPYLSGGSLLDIMKSSYP------------RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSV  141 (267)
T ss_pred             EEEEEeccCCCcHHHHHHHhcc------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCE
Confidence            3388999999999999986422            1358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh---hhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYY---KYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      +++|||++.........   ......++..|++||.+... .++.++|+||+|+++++|+ +|..||...+..+......
T Consensus       142 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~-~g~~p~~~~~~~~~~~~~~  220 (267)
T cd06610         142 KIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELA-TGAAPYSKYPPMKVLMLTL  220 (267)
T ss_pred             EEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHH-hCCCCccccChhhhHHHHh
Confidence            99999988654432211   12233567789999998766 6788999999999999999 7999998777655554443


Q ss_pred             hCcc-cCCCC---CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKL-CWKHS---SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~-~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .... .....   ..++..+.+++.+||..+|++||++++++.+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         221 QNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             cCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            3321 11111   2567889999999999999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.97  E-value=2.4e-30  Score=202.11  Aligned_cols=178  Identities=15%  Similarity=0.202  Sum_probs=139.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+++++|..++...               ..+++..++.++.|++.||.|||+.+++|+||+|.||+++.++.++
T Consensus        76 ~~v~e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~  140 (286)
T cd07847          76 HLVFEYCDHTVLNELEKNP---------------RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIK  140 (286)
T ss_pred             EEEEeccCccHHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEE
Confidence            3789999999998887643               3489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++........ ......++..|++||.+.+ ..++.++|+||+|+++++|+ +|..||.+....+....+.....
T Consensus       141 l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~-~g~~p~~~~~~~~~~~~~~~~~~  218 (286)
T cd07847         141 LCDFGFARILTGPGD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELL-TGQPLWPGKSDVDQLYLIRKTLG  218 (286)
T ss_pred             ECccccceecCCCcc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhC
Confidence            999999875433221 1123346678999999765 45788999999999999999 79999987765444333221000


Q ss_pred             ---------------------cCC--------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 ---------------------CWK--------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ---------------------~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                           ..+        .....+..+.+++.+||+.+|++||++.+++.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         219 DLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             CCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence                                 000        012456788999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=2.6e-30  Score=202.27  Aligned_cols=181  Identities=20%  Similarity=0.260  Sum_probs=142.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++.....           ....+++..+..++.|++.||.|||+.+++|+|++|.||+++.++.+
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~  144 (287)
T cd06621          76 IGIAMEYCEGGSLDSIYKKVKK-----------RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQV  144 (287)
T ss_pred             EEEEEEecCCCCHHHHHHHHHh-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeE
Confidence            4478999999999999875432           23468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL-----SDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~-----~~~~~~~~~  171 (223)
                      +++|||++.......   .....++..|++||.+....++.++|+|++|+++|+|+ +|..||...     ...+....+
T Consensus       145 ~l~dfg~~~~~~~~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~  220 (287)
T cd06621         145 KLCDFGVSGELVNSL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVA-QNRFPFPPEGEPPLGPIELLSYI  220 (287)
T ss_pred             EEeeccccccccccc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHH-hCCCCCCcccCCCCChHHHHHHH
Confidence            999999876443221   11234567799999998888899999999999999999 799999765     223444443


Q ss_pred             HhCcc-cCCC----CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKL-CWKH----SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~-~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..... ....    ....++.+.+++.+||+.+|.+||++.|++.+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~  266 (287)
T cd06621         221 VNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH  266 (287)
T ss_pred             hcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence            33111 1111    12346789999999999999999999999875

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.97  E-value=1.6e-30  Score=204.53  Aligned_cols=178  Identities=16%  Similarity=0.271  Sum_probs=144.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+++++|.+++..                ..+++.++..++.|++.|+.|||+.+++|+||+|+||+++.++.+
T Consensus        91 ~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~  154 (297)
T cd06656          91 LWVVMEYLAGGSLTDVVTE----------------TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSV  154 (297)
T ss_pred             EEEeecccCCCCHHHHHHh----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCE
Confidence            3488999999999999964                247899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-Cc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES-KK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~-~~  175 (223)
                      +++|||++........ ......++..|++||...+..++.++|+||+|+++|+++ +|..||...+.......+.. ..
T Consensus       155 ~l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~-tg~~pf~~~~~~~~~~~~~~~~~  232 (297)
T cd06656         155 KLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV-EGEPPYLNENPLRALYLIATNGT  232 (297)
T ss_pred             EECcCccceEccCCcc-CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCcchheeeeccCCC
Confidence            9999998865432211 122345677899999998888899999999999999999 79999977655333322222 21


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+...+..+.+++.+||+.+|++||++++++++
T Consensus       233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         233 PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            2223345678889999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=3.1e-30  Score=210.11  Aligned_cols=178  Identities=14%  Similarity=0.101  Sum_probs=136.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++|+++. ++|.+++...               ..+++..++.++.||+.||.|||+.|++||||||.||+++..+.++
T Consensus       162 ~lv~e~~~-~~l~~~l~~~---------------~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~  225 (392)
T PHA03207        162 CMVMPKYK-CDLFTYVDRS---------------GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAV  225 (392)
T ss_pred             EEEehhcC-CCHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEE
Confidence            36677764 7899999543               3599999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHh
Q psy15108         98 ISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD---QVLSQLES  173 (223)
Q Consensus        98 l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~---~~~~~~~~  173 (223)
                      ++|||++........ .......++..|++||.+....++.++|+||+||++|+|+ +|..||.+....   ..+..+..
T Consensus       226 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~-~g~~pf~~~~~~~~~~~l~~i~~  304 (392)
T PHA03207        226 LGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMS-VKNVTLFGKQVKSSSSQLRSIIR  304 (392)
T ss_pred             EccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHH-HCCCCCCCCCCCCcHHHHHHHHH
Confidence            999999865433221 1122356789999999998888999999999999999999 788888654321   11111100


Q ss_pred             ----Cc---------------------ccC--CC-----CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 ----KK---------------------LCW--KH-----SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ----~~---------------------~~~--~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                          ..                     .++  ..     ....+.++.++|.+||..||++||++.+++.+
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        305 CMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             HhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence                00                     000  00     01345678889999999999999999999876

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.97  E-value=3.7e-30  Score=201.00  Aligned_cols=180  Identities=18%  Similarity=0.235  Sum_probs=141.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+ +++|.+++....              .++++..++.++.||++||.|||+.+++|+||+|.||+++.++.+
T Consensus        74 ~~~v~e~~-~~~L~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~  138 (286)
T cd07832          74 FVLVMEYM-PSDLSEVLRDEE--------------RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVL  138 (286)
T ss_pred             eEEEeccc-CCCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcE
Confidence            34889999 999999997643              359999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++...............++..|++||.+... .++.++|+||+|+++++++ +|..+|.+.........+....
T Consensus       139 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~-tg~~~~~~~~~~~~~~~~~~~~  217 (286)
T cd07832         139 KIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELL-NGSPLFPGENDIEQLAIVFRTL  217 (286)
T ss_pred             EEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHH-cCCcCcCCCCHHHHHHHHHHHc
Confidence            9999998875543322122345677889999987654 3688999999999999999 6888887666544433332210


Q ss_pred             c-------------------cC---------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 L-------------------CW---------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~-------------------~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                   ..         ......+.++.+++.+|+..+|++||++++++.|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         218 GTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             CCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            0                   00         0112456889999999999999999999999876

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.7e-30  Score=200.25  Aligned_cols=176  Identities=18%  Similarity=0.288  Sum_probs=142.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+.+++|.++++.                ..+++..++.++.|+++|+.|||+.|++|+||+|+||+++..+.++
T Consensus        78 ~lv~e~~~~~~L~~~~~~----------------~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~  141 (277)
T cd06917          78 WIIMEYAEGGSVRTLMKA----------------GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVK  141 (277)
T ss_pred             EEEEecCCCCcHHHHHHc----------------cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEE
Confidence            378999999999999864                2589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++........ ......++..|++||.+.. ..++.++|+||+|+++|+|+ +|..||...........+.....
T Consensus       142 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll-~g~~p~~~~~~~~~~~~~~~~~~  219 (277)
T cd06917         142 LCDFGVAALLNQNSS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMA-TGNPPYSDVDAFRAMMLIPKSKP  219 (277)
T ss_pred             EccCCceeecCCCcc-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHH-hCCCCCCCCChhhhhhccccCCC
Confidence            999998875543321 1223456778999998764 34688999999999999999 79999987766554443333211


Q ss_pred             cCCCCC-CChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSS-KTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~-~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       +..+. ..+.++.+++..||+.+|++||++.+++.+
T Consensus       220 -~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         220 -PRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             -CCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence             22222 377889999999999999999999999875

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0594|consensus

Probab=99.97  E-value=3.8e-30  Score=196.81  Aligned_cols=180  Identities=21%  Similarity=0.289  Sum_probs=141.0

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|+|| ..-+|.+++...+.           .+..++...+..+++||++|+.|||+++|+||||||+||+++..|.+|+
T Consensus        94 lvfe~-~d~DL~~ymd~~~~-----------~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKl  161 (323)
T KOG0594|consen   94 LVFEF-LDRDLKKYMDSLPK-----------KPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKL  161 (323)
T ss_pred             EEEEe-ecccHHHHHHhccc-----------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEee
Confidence            44444 45789999987653           1135777999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC---
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK---  174 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~---  174 (223)
                      +|||+++...... ......+.|.+|.|||++.+. .|+...|+||+|||++||+ +++.-|++......+..+-.-   
T Consensus       162 aDFGlAra~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~-~~~~LFpG~se~~ql~~If~~lGt  239 (323)
T KOG0594|consen  162 ADFGLARAFSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMF-TRRPLFPGDSEIDQLFRIFRLLGT  239 (323)
T ss_pred             eccchHHHhcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHH-hCCCCCCCCcHHHHHHHHHHHcCC
Confidence            9999998554221 224556778899999999887 5899999999999999999 788889888775554443320   


Q ss_pred             ------------------cccCCCC-------CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 ------------------KLCWKHS-------SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ------------------~~~~~~~-------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                        .+.+..+       +.......+++.+|++.+|.+|.|++.++.|
T Consensus       240 P~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  240 PNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             CCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence                              0011101       1112467889999999999999999999987

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.97  E-value=4.5e-30  Score=201.67  Aligned_cols=156  Identities=12%  Similarity=0.157  Sum_probs=126.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhh------hhhhcCCcccccccc
Q psy15108         54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY------YKYRNAILPLRWLPY  127 (223)
Q Consensus        54 l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~------~~~~~~~~~~~~~~p  127 (223)
                      .++..+..++.|+++|+.|||+.+++||||||+||+++.++.++++|||+++.......      .......+++.|+||
T Consensus       123 ~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ap  202 (294)
T PHA02882        123 KNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGL  202 (294)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCH
Confidence            67888999999999999999999999999999999999999999999999876532210      011224578899999


Q ss_pred             cccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-HHH--------HHHHHhCcccCCCCCCChHHHHHHHHHhcCC
Q psy15108        128 EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQV--------LSQLESKKLCWKHSSKTPEYITSLHEKCIHP  198 (223)
Q Consensus       128 e~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  198 (223)
                      |...+..++.++||||+||++++++ +|..||.+... ...        ...+..+..   ....+++++.+++..||+.
T Consensus       203 e~~~~~~~~~~~DiwSlG~~l~el~-~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  278 (294)
T PHA02882        203 DAHNGACVTRRGDLESLGYCMLKWA-GIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVTKL  278 (294)
T ss_pred             HHhCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCccccchHHHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhC
Confidence            9998888999999999999999999 79999987732 221        122222211   2345688899999999999


Q ss_pred             CCCCCCCHHHHHHHH
Q psy15108        199 HPHQRPTFPSIVTQL  213 (223)
Q Consensus       199 dp~~Rps~~~ll~~L  213 (223)
                      +|++||+++++++.+
T Consensus       279 ~~~~rp~~~~l~~~~  293 (294)
T PHA02882        279 SYEEKPDYDALIKIF  293 (294)
T ss_pred             CCCCCCCHHHHHHhh
Confidence            999999999999876

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.97  E-value=2e-30  Score=202.15  Aligned_cols=177  Identities=19%  Similarity=0.278  Sum_probs=138.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+. |+|.+++....              ..+++.+++.++.|++.||.|||+.+++|+||+|.||+++. +.+
T Consensus        75 ~~lv~e~~~-~~l~~~l~~~~--------------~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~  138 (282)
T cd07831          75 LALVFELMD-MNLYELIKGRK--------------RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DIL  138 (282)
T ss_pred             EEEEEecCC-ccHHHHHHhcc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCe
Confidence            457888886 68888887543              25899999999999999999999999999999999999999 999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++.......  ......++..|++||.+.. ..++.++|+||+||++|+|+ +|..||...+..+....+....
T Consensus       139 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~-~~~~p~~~~~~~~~~~~~~~~~  215 (282)
T cd07831         139 KLADFGSCRGIYSKP--PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEIL-SLFPLFPGTNELDQIAKIHDVL  215 (282)
T ss_pred             EEEecccccccccCC--CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHH-cCCcCCCCCCHHHHHHHHHHHc
Confidence            999999887543222  1122346778999997654 44688999999999999999 7999998776554443332100


Q ss_pred             ----------------ccCC-----------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ----------------LCWK-----------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ----------------~~~~-----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                      ....           .....+.++.+++.+||+.+|++||++++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         216 GTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             CCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence                            0000           012457889999999999999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.97  E-value=3.1e-30  Score=201.06  Aligned_cols=173  Identities=17%  Similarity=0.284  Sum_probs=138.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|..+.                   .+++..+..++.|++.|+.|||+.|++|+||+|.||+++.++.+
T Consensus        74 ~~lv~e~~~~~~l~~~~-------------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~  134 (279)
T cd06619          74 ISICTEFMDGGSLDVYR-------------------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQV  134 (279)
T ss_pred             EEEEEecCCCCChHHhh-------------------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCE
Confidence            34789999999997553                   37899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-------HHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-------DQVLS  169 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-------~~~~~  169 (223)
                      +++|||++......   ......++..|++||.+....++.++|+||+|+++|+++ +|..||.....       .+...
T Consensus       135 ~l~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~-~g~~pf~~~~~~~~~~~~~~~~~  210 (279)
T cd06619         135 KLCDFGVSTQLVNS---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELA-LGRFPYPQIQKNQGSLMPLQLLQ  210 (279)
T ss_pred             EEeeCCcceecccc---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHH-hCCCCchhhcccccccchHHHHH
Confidence            99999998654322   123346778899999998888999999999999999999 79999865322       12222


Q ss_pred             HHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+.............+.++.+++.+||+.+|++||++++++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         211 CIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            2222211111123467889999999999999999999999876

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.97  E-value=6.7e-30  Score=186.09  Aligned_cols=166  Identities=13%  Similarity=0.228  Sum_probs=130.9

Q ss_pred             CChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         27 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        27 g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      |||.++++.++.              ++++.+++.++.|+++||.|||+++      ||.||+++.++.+++  ||.+..
T Consensus         1 GsL~~~l~~~~~--------------~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~   58 (176)
T smart00750        1 VSLADILEVRGR--------------PLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAF   58 (176)
T ss_pred             CcHHHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEe
Confidence            799999986533              6999999999999999999999998      999999999999998  998765


Q ss_pred             cchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhCcccC-----CC
Q psy15108        107 TYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCW-----KH  180 (223)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-~~~~~~~~~~~~~~-----~~  180 (223)
                      ....      ...++..|+|||.+.+..++.++||||+||++|+|+ +|..||..... ......+.......     ..
T Consensus        59 ~~~~------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (176)
T smart00750       59 KTPE------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEAL-DYELPYNEERELSAILEILLNGMPADDPRDRSN  131 (176)
T ss_pred             eccc------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHH-hCCCCccccchhcHHHHHHHHHhccCCcccccc
Confidence            4322      125678999999999889999999999999999999 79999975543 23333332221111     01


Q ss_pred             CCCChH--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhcc
Q psy15108        181 SSKTPE--YITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDV  221 (223)
Q Consensus       181 ~~~~~~--~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~  221 (223)
                      ....+.  ++++++..||..+|.+||++.++++++.....+.+
T Consensus       132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~~  174 (176)
T smart00750      132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAETL  174 (176)
T ss_pred             HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHHh
Confidence            112233  68999999999999999999999999988876654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0603|consensus

Probab=99.97  E-value=1.7e-30  Score=211.18  Aligned_cols=170  Identities=15%  Similarity=0.259  Sum_probs=142.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeee-ecCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI-SSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~-~~~~~~   96 (223)
                      ..|||.+.||.|.+.+...+.               +. ..+..|+.+|+.|+.|||++|++|||+||.|||+ +..+++
T Consensus       392 ~~v~e~l~g~ell~ri~~~~~---------------~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~l  455 (612)
T KOG0603|consen  392 YLVMELLDGGELLRRIRSKPE---------------FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHL  455 (612)
T ss_pred             eeeehhccccHHHHHHHhcch---------------hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcE
Confidence            389999999999998876433               44 7888899999999999999999999999999999 588999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~~~~~~~  175 (223)
                      +++|||.+......    .-...-+..|.|||++....|+.++|+||||+++|+|+ +|..||...... ++..++..+.
T Consensus       456 rltyFG~a~~~~~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML-~G~tp~~~~P~~~ei~~~i~~~~  530 (612)
T KOG0603|consen  456 RLTYFGFWSELERS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEML-TGRTLFAAHPAGIEIHTRIQMPK  530 (612)
T ss_pred             EEEEechhhhCchh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHH-hCCCccccCCchHHHHHhhcCCc
Confidence            99999999765443    11234467799999999999999999999999999999 899999877665 4444444332


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                          .....+++.++|+.+||+.||.+|+++.++..+
T Consensus       531 ----~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  531 ----FSECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             ----cccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence                236789999999999999999999999999765

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.97  E-value=3.4e-30  Score=201.18  Aligned_cols=179  Identities=18%  Similarity=0.259  Sum_probs=135.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+. ++|.+++...+              ..+++..++.++.||++||.|||+.+++|+||+|+||+++.++.+
T Consensus        74 ~~lv~e~~~-~~l~~~~~~~~--------------~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~  138 (284)
T cd07839          74 LTLVFEYCD-QDLKKYFDSCN--------------GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGEL  138 (284)
T ss_pred             eEEEEecCC-CCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcE
Confidence            447888886 68888887543              358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCC-CCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMP-FPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p-~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++....... .......++..|++||.+.+.. ++.++|+||+||++|+|+ +|..| |.+.+..+....+...
T Consensus       139 ~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~-tg~~p~~~~~~~~~~~~~~~~~  216 (284)
T cd07839         139 KLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA-NAGRPLFPGNDVDDQLKRIFRL  216 (284)
T ss_pred             EECccchhhccCCCC-CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHH-hcCCCCcCCCCHHHHHHHHHHH
Confidence            999999886543211 1122345577899999876644 688999999999999999 56656 4444433333222110


Q ss_pred             c------------------cc---------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 K------------------LC---------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~------------------~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                  ..         .+.....++++.+++.+||+.||.+|||+++++.+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         217 LGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             hCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            0                  00         01113467889999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.97  E-value=5.5e-30  Score=199.82  Aligned_cols=181  Identities=18%  Similarity=0.230  Sum_probs=139.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||++ |+|.+++.....           ....+++..++.++.|++.|+.|||++ +++|+||+|+||+++.++.
T Consensus        75 ~~lv~e~~~-~~l~~~l~~~~~-----------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~  142 (283)
T cd06617          75 VWICMEVMD-TSLDKFYKKVYD-----------KGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQ  142 (283)
T ss_pred             EEEEhhhhc-ccHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCC
Confidence            337788886 789999876432           224689999999999999999999997 9999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCccccccccccccc----CCCCcccchHHHHHHHHHHHhCCCCCCCCCC-HHHHHHH
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD----DEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQ  170 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~Di~slG~il~~l~~~~~~p~~~~~-~~~~~~~  170 (223)
                      ++++|||++.......  ......++..|++||.+.+    ..++.++|+||+|+++|+|+ +|..||.... ..+....
T Consensus       143 ~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~~~~~~~~  219 (283)
T cd06617         143 VKLCDFGISGYLVDSV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELA-TGRFPYDSWKTPFQQLKQ  219 (283)
T ss_pred             EEEeeccccccccccc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHH-hCCCCCCccccCHHHHHH
Confidence            9999999987543221  1122456778999998754    34678999999999999999 7999996532 2233333


Q ss_pred             HHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .............++.++.+++.+||+.+|.+||++++++.+
T Consensus       220 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         220 VVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             HHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            333322222223578899999999999999999999999874

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.97  E-value=1.4e-29  Score=195.29  Aligned_cols=182  Identities=18%  Similarity=0.215  Sum_probs=147.9

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ...+++||+.+++|.+++.....           ....+++..++.++.|+++|+.|||+.|++|+|++|+||+++. +.
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~  143 (260)
T cd08222          76 AFCIITEYCEGRDLDCKLEELKH-----------TGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NL  143 (260)
T ss_pred             ceEEEEEeCCCCCHHHHHHHHhh-----------cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CC
Confidence            35589999999999999975332           2246999999999999999999999999999999999999975 56


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++++|||++....... .......++..|++||......++.++|+||+|+++++++ ++..||...........+... 
T Consensus       144 ~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~-~~~~~~~~~~~~~~~~~~~~~-  220 (260)
T cd08222         144 LKIGDFGVSRLLMGSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMC-CLAHAFEGQNFLSVVLRIVEG-  220 (260)
T ss_pred             EeecccCceeecCCCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHH-hCCCCCCCccHHHHHHHHHcC-
Confidence            9999999886543221 1122345667899999988778888999999999999999 799999877666666555444 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..+..+..++.++.+++.+||..+|++||++.+++++
T Consensus       221 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         221 PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence            3334455678899999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.97  E-value=5.5e-30  Score=198.26  Aligned_cols=181  Identities=15%  Similarity=0.247  Sum_probs=143.7

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC-
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-   94 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~-   94 (223)
                      ...++++|+++++|.++++..+               ++++..+..++.|++.|+.|||+.|++|+||+|.||+++.++ 
T Consensus        77 ~~~~v~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~  141 (268)
T cd06630          77 HFNLFVEWMAGGSVSHLLSKYG---------------AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ  141 (268)
T ss_pred             eEEEEEeccCCCcHHHHHHHhC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence            3558899999999999997643               489999999999999999999999999999999999998775 


Q ss_pred             CeEEcCCCCCcccchhhh---hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHH
Q psy15108         95 SVKISLSGLSKDTYQKEY---YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD---QVL  168 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~---~~~  168 (223)
                      .++++|||.+........   .......++..|++||.+.+..++.++|+|++|+++++++ +|..||......   ...
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~-~g~~p~~~~~~~~~~~~~  220 (268)
T cd06630         142 RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMA-TAKPPWNAEKHSNHLALI  220 (268)
T ss_pred             EEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHH-hCCCCCCCCCCcchHHHH
Confidence            589999998865433211   0112335677899999988888899999999999999999 799999654432   222


Q ss_pred             HHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ............+...+.++.+++.+||..+|.+||++.+++.+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         221 FKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             HHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence            22222223344455678889999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.97  E-value=6e-30  Score=202.60  Aligned_cols=182  Identities=20%  Similarity=0.294  Sum_probs=139.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.++++....             ..+++..+..++.|+++||.|||+.+++|+||+|+||+++.++.+
T Consensus        74 ~~~~~e~~~~~~l~~~l~~~~~-------------~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~  140 (314)
T cd08216          74 LYVVSPLMAYGSCEDLLKTHFP-------------EGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKV  140 (314)
T ss_pred             EEEEEeccCCCCHHHHHHHhcc-------------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCce
Confidence            4578999999999999986533             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh------hhhhcCCccccccccccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy15108         97 KISLSGLSKDTYQKEY------YKYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL  168 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~  168 (223)
                      ++.||+.+........      .......++..|++||.+..  ..++.++|+||+|+++++++ +|..||.........
T Consensus       141 kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~-~g~~pf~~~~~~~~~  219 (314)
T cd08216         141 VLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELA-NGHVPFKDMPATQML  219 (314)
T ss_pred             EEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHH-hCCCCCCCCCHHHHH
Confidence            9999998764432211      01122345567999999865  34788999999999999999 799999876544332


Q ss_pred             -HHHHhCc-------------------------------ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        169 -SQLESKK-------------------------------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       169 -~~~~~~~-------------------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       +.+....                               .........+.++.+++.+||+.+|++||++++++++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         220 LEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             HHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence             2211100                               0000011224678899999999999999999999876

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.97  E-value=7.4e-30  Score=195.28  Aligned_cols=179  Identities=23%  Similarity=0.353  Sum_probs=145.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+++|.+++....              .++++..+..++.|+++|+.+||+.|++|+||+|.||+++.++.+
T Consensus        72 ~~l~~e~~~~~~L~~~~~~~~--------------~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~  137 (253)
T cd05122          72 LWIVMEFCSGGSLKDLLKSTN--------------QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEV  137 (253)
T ss_pred             EEEEEecCCCCcHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeE
Confidence            447899999999999997642              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+........  .....++..|++||.+....++.++|+||+|+++++++ +|..||...+.............
T Consensus       138 ~l~d~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~  214 (253)
T cd05122         138 KLIDFGLSAQLSDTKA--RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELA-EGKPPYSELPPMKALFKIATNGP  214 (253)
T ss_pred             EEeecccccccccccc--ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHH-hCCCCCCCCchHHHHHHHHhcCC
Confidence            9999998865543321  23445677899999998878889999999999999999 79999987755544444433211


Q ss_pred             c-CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 C-WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      . ......++..+.+++..||+.||++||++.+++++
T Consensus       215 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         215 PGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             CCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            1 11122337889999999999999999999999864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=7.5e-30  Score=197.30  Aligned_cols=178  Identities=17%  Similarity=0.218  Sum_probs=147.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+++++|.+++...+               .+++..+..++.|+++|+.|||+.+++|+|++|+||+++.++.++
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~---------------~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~  146 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYG---------------ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVK  146 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEE
Confidence            36889999999999997643               389999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         98 ISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        98 l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++|||++.......  ........++..|++||.+.+..++.++|+||||+++++++ +|..||......+...++....
T Consensus       147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~  225 (264)
T cd06653         147 LGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEML-TEKPPWAEYEAMAAIFKIATQP  225 (264)
T ss_pred             ECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHH-hCCCCCCccCHHHHHHHHHcCC
Confidence            99999987542211  01112345677899999998888889999999999999999 7999998877666555555443


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+...++++.+++.+||. +|..||++.+++.|
T Consensus       226 ~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         226 TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence            4455677788999999999999 57999999998765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=7.8e-30  Score=199.27  Aligned_cols=178  Identities=21%  Similarity=0.280  Sum_probs=142.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+|+||+++|+|.+++...+               .+++..+..++.+++.|+.|||+ .+++|+||+|.||+++.++.
T Consensus        78 ~~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~  142 (284)
T cd06620          78 ICMCMEFMDCGSLDRIYKKGG---------------PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQ  142 (284)
T ss_pred             EEEEEecCCCCCHHHHHHhcc---------------CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCc
Confidence            348999999999999997643               48999999999999999999997 58999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH----------
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD----------  165 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~----------  165 (223)
                      ++++|||++......   ......++..|++||.+....++.++|+||+||++++++ +|..||......          
T Consensus       143 ~~l~d~gl~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~-tg~~p~~~~~~~~~~~~~~~~~  218 (284)
T cd06620         143 IKLCDFGVSGELINS---IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELA-LGKFPFAFSNIDDDGQDDPMGI  218 (284)
T ss_pred             EEEccCCcccchhhh---ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHH-hCCCCCcccchhhhhhhhhhHH
Confidence            999999987643221   112345778899999988888899999999999999999 799999765432          


Q ss_pred             -HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        166 -QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       166 -~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                       .....+............++.++.+++.+||+.||.+||+++|++++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         219 LDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             HHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence             222222222111111123678899999999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.97  E-value=5.7e-30  Score=199.35  Aligned_cols=180  Identities=19%  Similarity=0.313  Sum_probs=142.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .-+++||+++++|.+++...+.             ..+++..+..++.|++.|+.|||+.|++|+||+|.||+++.++.+
T Consensus        68 ~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~  134 (277)
T cd05577          68 LCLVMTLMNGGDLKYHIYNVGE-------------PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNV  134 (277)
T ss_pred             EEEEEecCCCCcHHHHHHHcCc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCE
Confidence            3488999999999999986542             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC--
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK--  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~--  174 (223)
                      +++|||.+.......  ......++..|++||.+.+..++.++|+||+|+++++++ +|..||...........+...  
T Consensus       135 ~l~dfg~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~  211 (277)
T cd05577         135 RISDLGLAVELKGGK--KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMI-AGRSPFRQRKEKVEKEELKRRTL  211 (277)
T ss_pred             EEccCcchhhhccCC--ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHh-hCCCCCCCCcccccHHHHHhccc
Confidence            999999876432211  112345567899999988888899999999999999999 799999765442222222111  


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                      ......+...++.+.+++.+||+.+|.+||     ++.+++.+
T Consensus       212 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h  254 (277)
T cd05577         212 EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH  254 (277)
T ss_pred             cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence            122334456788999999999999999999     66667653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0614|consensus

Probab=99.97  E-value=2e-30  Score=206.00  Aligned_cols=178  Identities=17%  Similarity=0.173  Sum_probs=162.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .-+.||-|.||+|...|++++.               |++..+..++.-+++|++|||++||++||+||+|.+++.+|.+
T Consensus       495 vYmLmEaClGGElWTiLrdRg~---------------Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~  559 (732)
T KOG0614|consen  495 VYMLMEACLGGELWTILRDRGS---------------FDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYL  559 (732)
T ss_pred             hhhhHHhhcCchhhhhhhhcCC---------------cccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCce
Confidence            3367899999999999998755               9999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      |+.|||+++......  ...+..||+.|.|||.+.++..+.++|.|+||+++||++ +|.+||.+.++..++..|.++-.
T Consensus       560 KLVDFGFAKki~~g~--KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL-~G~pPFs~~dpmktYn~ILkGid  636 (732)
T KOG0614|consen  560 KLVDFGFAKKIGSGR--KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELL-TGSPPFSGVDPMKTYNLILKGID  636 (732)
T ss_pred             EEeehhhHHHhccCC--ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHH-cCCCCCCCCchHHHHHHHHhhhh
Confidence            999999998776554  457789999999999999999999999999999999999 89999999999999999999888


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                      .+..|..++....++|+++-..+|.+|..     +.+|.+|
T Consensus       637 ~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH  677 (732)
T KOG0614|consen  637 KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH  677 (732)
T ss_pred             hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence            88888899999999999999999999965     5666555

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=4.4e-30  Score=211.79  Aligned_cols=178  Identities=17%  Similarity=0.170  Sum_probs=133.6

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++++++ .++|.+++....              ..+++.+++.++.|++.||.|||+.|++||||||.||+++.++.++|
T Consensus       237 lv~e~~-~~~L~~~l~~~~--------------~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL  301 (461)
T PHA03211        237 LVLPKY-RSDLYTYLGARL--------------RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICL  301 (461)
T ss_pred             EEEEcc-CCCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEE
Confidence            667777 579999987542              25999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC--------CHHHHHH
Q psy15108         99 SLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL--------SDDQVLS  169 (223)
Q Consensus        99 ~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~--------~~~~~~~  169 (223)
                      +|||+++........ ......++..|++||.+.+..++.++|||||||++||++ .+..++...        ...++..
T Consensus       302 ~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~-~g~~~lf~~~~~~~~~~~~~~l~~  380 (461)
T PHA03211        302 GDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAA-VHTASLFSASRGDERRPYDAQILR  380 (461)
T ss_pred             cccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHH-HcCCCcccCCcccccCCcHHHHHH
Confidence            999998754322111 112346789999999998888999999999999999998 444333211        1222222


Q ss_pred             HHHhCccc--------------------------------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        170 QLESKKLC--------------------------------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       170 ~~~~~~~~--------------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+......                                |......+..+.+++.+||+.||.+|||+.|+++|
T Consensus       381 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        381 IIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             HHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence            22211100                                00111334578899999999999999999999986

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.97  E-value=2.8e-29  Score=199.15  Aligned_cols=177  Identities=17%  Similarity=0.282  Sum_probs=144.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+. |+|.+++..++              .++++.++..++.+++.|+.|||+.+++|+||+|.||+++.++.++
T Consensus       101 ~lv~e~~~-g~l~~~~~~~~--------------~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~k  165 (317)
T cd06635         101 WLVMEYCL-GSASDLLEVHK--------------KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVK  165 (317)
T ss_pred             EEEEeCCC-CCHHHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEE
Confidence            37888886 58888886543              3589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++|||++.....     .....++..|++||.+.   ...++.++|+||+|+++|+++ +|..||...........+...
T Consensus       166 l~dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~-~g~~p~~~~~~~~~~~~~~~~  239 (317)
T cd06635         166 LADFGSASIASP-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNMNAMSALYHIAQN  239 (317)
T ss_pred             EecCCCccccCC-----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHH-hCCCCCCCccHHHHHHHHHhc
Confidence            999998764322     12345677899999874   345788999999999999999 799999877766666665554


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ..........+..+.+++.+||+.+|.+||++.+++++...
T Consensus       240 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~  280 (317)
T cd06635         240 ESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV  280 (317)
T ss_pred             cCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence            34333445678889999999999999999999999987543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.97  E-value=6.5e-30  Score=201.31  Aligned_cols=179  Identities=19%  Similarity=0.294  Sum_probs=139.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+. ++|.+++...+.              .+++..+..++.|+++||.|||+.+++|+||+|+||+++.++.+
T Consensus        79 ~~lv~e~~~-~~l~~~l~~~~~--------------~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~  143 (301)
T cd07873          79 LTLVFEYLD-KDLKQYLDDCGN--------------SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGEL  143 (301)
T ss_pred             EEEEEeccc-cCHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcE
Confidence            337889987 699999976433              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .......++..|++||.+.+. .++.++|+||+|+++|+|+ +|..||...+..+....+....
T Consensus       144 kl~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~-tg~~~f~~~~~~~~~~~~~~~~  221 (301)
T cd07873         144 KLADFGLARAKSIPT-KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMS-TGRPLFPGSTVEEQLHFIFRIL  221 (301)
T ss_pred             EECcCcchhccCCCC-CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHc
Confidence            999999886432211 111233457789999987653 4788999999999999999 7999998776654443322110


Q ss_pred             c-------------------cCC---------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 L-------------------CWK---------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~-------------------~~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                   ..+         ....+++.+++++.+|++.||.+|||++++++|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h  286 (301)
T cd07873         222 GTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH  286 (301)
T ss_pred             CCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            0                   000         012467789999999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.97  E-value=1.7e-29  Score=199.51  Aligned_cols=174  Identities=17%  Similarity=0.278  Sum_probs=140.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+. |+|.+++....              ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++
T Consensus        91 ~lv~e~~~-g~l~~~~~~~~--------------~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~k  155 (307)
T cd06607          91 WLVMEYCL-GSASDILEVHK--------------KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVK  155 (307)
T ss_pred             EEEHHhhC-CCHHHHHHHcc--------------cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEE
Confidence            37788886 68888876432              2589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++|||++......     ....++..|++||.+.   ...++.++|+||||+++|+++ +|..||...+.......+...
T Consensus       156 L~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~-tg~~p~~~~~~~~~~~~~~~~  229 (307)
T cd06607         156 LADFGSASLVSPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNMNAMSALYHIAQN  229 (307)
T ss_pred             EeecCcceecCCC-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHH-cCCCCCCCccHHHHHHHHhcC
Confidence            9999988643221     2345667899999874   345788999999999999999 799999887766655544433


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .........++..+.+++.+||+.+|++||++.+++.+
T Consensus       230 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         230 DSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             CCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            22222233467889999999999999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.97  E-value=7.5e-30  Score=199.26  Aligned_cols=181  Identities=18%  Similarity=0.181  Sum_probs=137.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|++|+. ++|.+++.....            ...+++..+..++.|+++||.|||+.+++|+||+|+||+++.++.+
T Consensus        74 ~~~v~e~~~-~~l~~~~~~~~~------------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~  140 (285)
T cd07861          74 LYLIFEFLS-MDLKKYLDSLPK------------GQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVI  140 (285)
T ss_pred             EEEEEecCC-CCHHHHHhcCCC------------CCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcE
Confidence            447889987 799999875422            2468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC-
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK-  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~-  174 (223)
                      +++|||++....... .......++..|+|||.+.+. .++.++|+||+|+++++++ +|..||.+............. 
T Consensus       141 ~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~-tg~~~~~~~~~~~~~~~~~~~~  218 (285)
T cd07861         141 KLADFGLARAFGIPV-RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMA-TKKPLFHGDSEIDQLFRIFRIL  218 (285)
T ss_pred             EECcccceeecCCCc-ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHHHh
Confidence            999999886543221 112233457789999987654 4688999999999999999 789899766543222111100 


Q ss_pred             --------------------c------ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 --------------------K------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 --------------------~------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                          .      ........+++++.+++.+||..||.+|||+++++.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         219 GTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             CCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence                                0      0000123467889999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0574|consensus

Probab=99.97  E-value=2.7e-31  Score=199.33  Aligned_cols=178  Identities=20%  Similarity=0.297  Sum_probs=153.3

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      .|||||-.|+..++++.++.              +++++.+..++...++||+|||...-+|||||+.||++..+|..|+
T Consensus       105 IVMEYCGAGSiSDI~R~R~K--------------~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKL  170 (502)
T KOG0574|consen  105 IVMEYCGAGSISDIMRARRK--------------PLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKL  170 (502)
T ss_pred             eehhhcCCCcHHHHHHHhcC--------------CccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhh
Confidence            89999999999999998765              8999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc-cc
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK-LC  177 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~-~~  177 (223)
                      .|||.+....... ...++..+++.|++||++..-.|..++||||+|++..||. .|+.||.+..+...+..+-... +.
T Consensus       171 ADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMA-EG~PPYsDIHPMRAIFMIPT~PPPT  248 (502)
T KOG0574|consen  171 ADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMA-EGRPPYSDIHPMRAIFMIPTKPPPT  248 (502)
T ss_pred             hhccccchhhhhH-HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhh-cCCCCcccccccceeEeccCCCCCC
Confidence            9999987654432 2357789999999999999889999999999999999999 8999999887755444333321 22


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +..+...+.++-++++.||...|++|.++.++++|
T Consensus       249 F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  249 FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            22344567889999999999999999999999876

>KOG0612|consensus

Probab=99.97  E-value=3.1e-30  Score=220.46  Aligned_cols=183  Identities=17%  Similarity=0.199  Sum_probs=157.4

Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec
Q psy15108         13 DSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS   92 (223)
Q Consensus        13 ~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~   92 (223)
                      +..---+||+|++||+|..+|.+..               .+++.-+..++.+|+-||..+|+.|++||||||.|||++.
T Consensus       146 D~~~LYlVMdY~pGGDlltLlSk~~---------------~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~  210 (1317)
T KOG0612|consen  146 DERYLYLVMDYMPGGDLLTLLSKFD---------------RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK  210 (1317)
T ss_pred             CccceEEEEecccCchHHHHHhhcC---------------CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc
Confidence            4444448999999999999998653               4999999999999999999999999999999999999999


Q ss_pred             CCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccc----c-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy15108         93 DLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF----D-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV  167 (223)
Q Consensus        93 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~----~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~  167 (223)
                      .|++++.|||-+......+.......+|||.|.+||++.    + ..|....|.||+||++|||+ +|..||...+..++
T Consensus       211 ~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMl-yG~TPFYadslveT  289 (1317)
T KOG0612|consen  211 SGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEML-YGETPFYADSLVET  289 (1317)
T ss_pred             cCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHH-cCCCcchHHHHHHH
Confidence            999999999988777655555567789999999999986    2 45889999999999999999 99999999999999


Q ss_pred             HHHHHhCcccCCCC--CCChHHHHHHHHHhcCCCCCCCCC---HHHHHHH
Q psy15108        168 LSQLESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPT---FPSIVTQ  212 (223)
Q Consensus       168 ~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps---~~~ll~~  212 (223)
                      +..|+...-.+..|  ...+++.++||.+.+. +|+.|..   ++++..|
T Consensus       290 Y~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H  338 (1317)
T KOG0612|consen  290 YGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH  338 (1317)
T ss_pred             HHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence            99998874444434  6789999999998776 6667766   8888766

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.2e-29  Score=194.64  Aligned_cols=178  Identities=21%  Similarity=0.293  Sum_probs=148.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+++|.+++...+               .+++..+..++.|++.|+.+||+.|++|+||+|.||+++.++.+
T Consensus        74 ~~~v~e~~~~~~L~~~~~~~~---------------~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~  138 (254)
T cd06627          74 LYIILEYAENGSLRQIIKKFG---------------PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVV  138 (254)
T ss_pred             EEEEEecCCCCcHHHHHHhcc---------------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCE
Confidence            447889999999999998653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+......... .....++..|++||......++.++|+|++|+++++++ +|..||............... .
T Consensus       139 ~l~d~~~~~~~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~-~g~~p~~~~~~~~~~~~~~~~-~  215 (254)
T cd06627         139 KLADFGVATKLNDVSKD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELL-TGNPPYYDLNPMAALFRIVQD-D  215 (254)
T ss_pred             EEeccccceecCCCccc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHH-hCCCCCCCccHHHHHHHHhcc-C
Confidence            99999988755433211 12345677899999988777889999999999999999 799999877765555554433 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+...+..+.+++.+||..+|++||++.+++.+
T Consensus       216 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  251 (254)
T cd06627         216 HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH  251 (254)
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence            344556778999999999999999999999998753

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.97  E-value=5.3e-30  Score=203.20  Aligned_cols=186  Identities=17%  Similarity=0.239  Sum_probs=132.1

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee----cCC
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS----SDL   94 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~----~~~   94 (223)
                      ++++|+ +++|.+++.......      ...+...+++..+..++.|++.||.|||++|++||||||+||++.    ..+
T Consensus        77 lv~e~~-~~~l~~~~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~  149 (317)
T cd07868          77 LLFDYA-EHDLWHIIKFHRASK------ANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG  149 (317)
T ss_pred             EEEecc-CCCHHHHHHhccccc------ccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcC
Confidence            566765 468999987543210      001223589999999999999999999999999999999999994    457


Q ss_pred             CeEEcCCCCCcccchhh--hhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHH------
Q psy15108         95 SVKISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD------  165 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~------  165 (223)
                      .++++|||++.......  ........++..|+|||.+.+. .++.++|+||+||++++|+ +|..||......      
T Consensus       150 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~-~g~~~f~~~~~~~~~~~~  228 (317)
T cd07868         150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNP  228 (317)
T ss_pred             cEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHH-hCCCCccCCccccccccc
Confidence            89999999987543221  1122345678889999998764 5788999999999999999 799898643211      


Q ss_pred             ---HHHHHHHh---------------Cc--------cc---C----------CCCCCChHHHHHHHHHhcCCCCCCCCCH
Q psy15108        166 ---QVLSQLES---------------KK--------LC---W----------KHSSKTPEYITSLHEKCIHPHPHQRPTF  206 (223)
Q Consensus       166 ---~~~~~~~~---------------~~--------~~---~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~  206 (223)
                         .....+..               ..        ..   .          ......+.++.+++.+||+.||.+|||+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~  308 (317)
T cd07868         229 YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITS  308 (317)
T ss_pred             ccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCH
Confidence               00111000               00        00   0          0001224567899999999999999999


Q ss_pred             HHHHHH
Q psy15108        207 PSIVTQ  212 (223)
Q Consensus       207 ~~ll~~  212 (223)
                      +|+++|
T Consensus       309 ~e~l~h  314 (317)
T cd07868         309 EQAMQD  314 (317)
T ss_pred             HHHhcC
Confidence            999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.97  E-value=1.9e-29  Score=196.40  Aligned_cols=177  Identities=21%  Similarity=0.285  Sum_probs=147.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+++|.+++..                ..+++..+..++.|++.|+.+||+.+++|+||+|.||+++.++.+
T Consensus        77 ~~lv~e~~~~~~l~~~i~~----------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~  140 (277)
T cd06641          77 LWIIMEYLGGGSALDLLEP----------------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEV  140 (277)
T ss_pred             EEEEEEeCCCCcHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCE
Confidence            4488999999999999963                248999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|++||.+....++.++|+||+|+++++++ +|..||...........+... .
T Consensus       141 ~l~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~-~g~~p~~~~~~~~~~~~~~~~-~  217 (277)
T cd06641         141 KLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA-KGEPPHSELHPMKVLFLIPKN-N  217 (277)
T ss_pred             EEeecccceecccch-hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHH-cCCCCCCccchHHHHHHHhcC-C
Confidence            999999886543322 1122345677899999988888889999999999999999 799999877766655554433 2


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .......++.++.+++.+||+.+|.+||++.+++++
T Consensus       218 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         218 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            333455678899999999999999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.1e-29  Score=193.02  Aligned_cols=176  Identities=17%  Similarity=0.220  Sum_probs=147.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+++|.+++...+               .+++..+..++.|+++|+.+||+.+++|+||+|.||+++.++.+
T Consensus        68 ~~~v~e~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~  132 (250)
T cd05123          68 LYLVLEYAPGGELFSHLSKEG---------------RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHI  132 (250)
T ss_pred             eEEEEecCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcE
Confidence            568899999999999998643               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+....... .......++..|++||...+...+.++|+|+||+++++++ +|..||...+..+....+...  
T Consensus       133 ~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~-~g~~p~~~~~~~~~~~~~~~~--  208 (250)
T cd05123         133 KLTDFGLAKELSSEG-SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEML-TGKPPFYAEDRKEIYEKILKD--  208 (250)
T ss_pred             EEeecCcceecccCC-CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHhcC--
Confidence            999999886543321 1123345667899999998888888999999999999999 799999888776666665553  


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCH---HHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTF---PSIVT  211 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~---~~ll~  211 (223)
                      ....+...+..+.+++.+||..||++||++   ++++.
T Consensus       209 ~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         209 PLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence            344566678999999999999999999999   55544

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.97  E-value=6.6e-30  Score=200.63  Aligned_cols=178  Identities=17%  Similarity=0.283  Sum_probs=144.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+++++|.+++.+.                .+++..+..++.|++.|+.|||+.|++|+|++|+||+++.++.+
T Consensus        91 ~~lv~e~~~~~~L~~~~~~~----------------~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~  154 (293)
T cd06647          91 LWVVMEYLAGGSLTDVVTET----------------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV  154 (293)
T ss_pred             EEEEEecCCCCcHHHHHhhc----------------CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCE
Confidence            44889999999999999642                47899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC-c
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK-K  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~-~  175 (223)
                      +++|||++........ ......++..|++||.+....++.++|+||||+++|+++ +|..||...........+... .
T Consensus       155 kL~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll-~g~~pf~~~~~~~~~~~~~~~~~  232 (293)
T cd06647         155 KLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV-EGEPPYLNENPLRALYLIATNGT  232 (293)
T ss_pred             EEccCcceeccccccc-ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHH-hCCCCCCCCChhhheeehhcCCC
Confidence            9999998764433221 122345677899999998888899999999999999999 799999876654433333222 1


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+...+..+.+++.+||..+|++||++++++.+
T Consensus       233 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         233 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            2222334567889999999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0577|consensus

Probab=99.97  E-value=2.5e-30  Score=208.89  Aligned_cols=173  Identities=18%  Similarity=0.272  Sum_probs=149.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|||||-| |-.|++..++.              ++.+..+..|..+.+.||.|||+.+.+|||||+.||+++..|.||+
T Consensus       103 LVMEYClG-SAsDlleVhkK--------------plqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKL  167 (948)
T KOG0577|consen  103 LVMEYCLG-SASDLLEVHKK--------------PLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKL  167 (948)
T ss_pred             HHHHHHhc-cHHHHHHHHhc--------------cchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeee
Confidence            89999875 55666665554              7999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      .|||-+....     +.+..+||++|+|||++.   .+.|+.++||||+||+..|+. .+++|+.+++....+..|.+..
T Consensus       168 aDFGSAsi~~-----PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELA-ERkPPlFnMNAMSALYHIAQNe  241 (948)
T KOG0577|consen  168 ADFGSASIMA-----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNMNAMSALYHIAQNE  241 (948)
T ss_pred             ccccchhhcC-----chhcccCCccccchhHheeccccccCCccceeeccchhhhhh-hcCCCccCchHHHHHHHHHhcC
Confidence            9999775332     346789999999999975   567999999999999999999 8999999998887777787764


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+.......+..+..|+..||+.-|.+|||.++++.|
T Consensus       242 sPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  242 SPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             CCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence            4444456789999999999999999999999999876

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.97  E-value=1.5e-29  Score=195.98  Aligned_cols=180  Identities=20%  Similarity=0.294  Sum_probs=139.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec-C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSL--STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-D   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~-~   93 (223)
                      ..+++||+.+++|.+++.....              ++  ++..+..++.|++.|+.|||+.+++|+||+|.||+++. .
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~  145 (268)
T cd06624          80 FKIFMEQVPGGSLSALLRSKWG--------------PLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYS  145 (268)
T ss_pred             EEEEEecCCCCCHHHHHHHhcc--------------cCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC
Confidence            4488899999999999986422              34  88899999999999999999999999999999999976 5


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCC--CCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-HHHH
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ-VLSQ  170 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~-~~~~  170 (223)
                      +.++++|||.+........ ......++..|++||.+....  ++.++|+||+|+++|+++ +|..||....... ....
T Consensus       146 ~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~-~g~~p~~~~~~~~~~~~~  223 (268)
T cd06624         146 GVVKISDFGTSKRLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMA-TGKPPFIELGEPQAAMFK  223 (268)
T ss_pred             CeEEEecchhheecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHH-hCCCCCccccChhhhHhh
Confidence            7899999998865432211 112234677899999976543  778999999999999999 7999997654322 1111


Q ss_pred             HHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..........+..+++++.+++.+||+.+|.+||++.+++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         224 VGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             hhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence            111112333456678899999999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.97  E-value=5.5e-30  Score=200.24  Aligned_cols=180  Identities=17%  Similarity=0.252  Sum_probs=139.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.++.+..++.+.               ..+++..+..++.|++.|+.|||+.+++|+|++|.||+++.++.+
T Consensus        75 ~~iv~e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~  139 (288)
T cd07833          75 LYLVFEYVERTLLELLEASP---------------GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVL  139 (288)
T ss_pred             EEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCE
Confidence            44889999987777766543               348999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++...............++..|+|||..... .++.++|+||+|+++|+++ +|..||...........+....
T Consensus       140 kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~-~g~~~~~~~~~~~~~~~~~~~~  218 (288)
T cd07833         140 KLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELL-DGEPLFPGDSDIDQLYLIQKCL  218 (288)
T ss_pred             EEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHh
Confidence            9999998865433321122234556779999998877 7889999999999999999 7998997665443322221100


Q ss_pred             ----------------c---cC-----------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ----------------L---CW-----------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ----------------~---~~-----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                      .   ..           ..+..++.++.+++++||..+|++||++++++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         219 GPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             CCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence                            0   00           0122347889999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG0983|consensus

Probab=99.97  E-value=1.3e-29  Score=187.69  Aligned_cols=158  Identities=15%  Similarity=0.268  Sum_probs=130.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCccccccccccc
Q psy15108         52 RSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAV  130 (223)
Q Consensus        52 ~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~  130 (223)
                      .+++|..+-++...+++||.||-+ ++++|||+||+|||+|..|++|++|||++....++.  ......|-+.|++||-+
T Consensus       186 ~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk--AhtrsAGC~~YMaPERi  263 (391)
T KOG0983|consen  186 GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--AHTRSAGCAAYMAPERI  263 (391)
T ss_pred             CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccc--ccccccCCccccCcccc
Confidence            369999999999999999999975 589999999999999999999999999997765544  33445666789999988


Q ss_pred             cc---CCCCcccchHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHhCcc-cCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy15108        131 FD---DEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQLESKKL-CWKHSSKTPEYITSLHEKCIHPHPHQRPT  205 (223)
Q Consensus       131 ~~---~~~~~~~Di~slG~il~~l~~~~~~p~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps  205 (223)
                      ..   ..|+..+||||||+.++|+. +|+.||.+-+ ..+++..+....+ .++...++++.+.+++..||+.|+.+||.
T Consensus       264 dp~~~~kYDiRaDVWSlGITlveLa-Tg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~  342 (391)
T KOG0983|consen  264 DPPDKPKYDIRADVWSLGITLVELA-TGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPK  342 (391)
T ss_pred             CCCCCCccchhhhhhhhccchhhhh-cccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcc
Confidence            63   35889999999999999999 8999998743 4556655555433 23333458999999999999999999999


Q ss_pred             HHHHHHH
Q psy15108        206 FPSIVTQ  212 (223)
Q Consensus       206 ~~~ll~~  212 (223)
                      +.++++|
T Consensus       343 Y~~Ll~h  349 (391)
T KOG0983|consen  343 YNKLLEH  349 (391)
T ss_pred             hHHHhcC
Confidence            9999876

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.96  E-value=1.4e-29  Score=201.85  Aligned_cols=178  Identities=18%  Similarity=0.227  Sum_probs=142.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++++|+. ++|.++++..               ..+++..++.++.|+++|+.+||+.|++|+||+|.||+++.++.++
T Consensus        80 ~lv~e~~~-~~l~~~l~~~---------------~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~  143 (330)
T cd07834          80 YIVTELME-TDLHKVIKSP---------------QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLK  143 (330)
T ss_pred             EEEecchh-hhHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence            47788877 5899999753               2599999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhh--hhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         98 ISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++|||++........  .......++..|++||.+.+. .++.++|+||+|+++++++ +|..||.+.+..+....+...
T Consensus       144 L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~-~g~~pf~~~~~~~~~~~i~~~  222 (330)
T cd07834         144 ICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL-TRKPLFPGRDYIDQLNLIVEV  222 (330)
T ss_pred             EcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHH-cCCCCcCCCCHHHHHHHHHHh
Confidence            999998875533221  112234567789999998877 7889999999999999999 799999877765554443331


Q ss_pred             cccC-----------------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCW-----------------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~-----------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+                             ......+.++.+++.+||+.+|.+||++++++.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  289 (330)
T cd07834         223 LGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH  289 (330)
T ss_pred             cCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            1000                             0113357788999999999999999999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.96  E-value=7.1e-30  Score=194.55  Aligned_cols=164  Identities=10%  Similarity=0.098  Sum_probs=132.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++....               .+++..+..++.|+++|+.|||+.+++|+||+|+||+++.++.+
T Consensus        60 ~~lv~e~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  124 (237)
T cd05576          60 VFLVLQHAEGGKLWSHISKFL---------------NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHI  124 (237)
T ss_pred             EEEEEecCCCCCHHHHHHHhc---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCE
Confidence            458999999999999997643               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||.+.......    .....+..|++||......++.++|+||+|+++|+++ +|..|+......     + ....
T Consensus       125 ~l~df~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~-~g~~~~~~~~~~-----~-~~~~  193 (237)
T cd05576         125 QLTYFSRWSEVEDSC----DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELL-TGKTLVECHPSG-----I-NTHT  193 (237)
T ss_pred             EEecccchhcccccc----ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHH-HCcchhhcCchh-----c-cccc
Confidence            999999775433211    1223456699999988788889999999999999999 688776533211     0 1111


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTF  206 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~  206 (223)
                      ....+..++..+++++.+|++.||++||++
T Consensus       194 ~~~~~~~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         194 TLNIPEWVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             ccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence            223445678889999999999999999996

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.96  E-value=1.1e-29  Score=198.52  Aligned_cols=179  Identities=21%  Similarity=0.286  Sum_probs=138.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.++....               ..+++..++.++.|+++|+.|||+.+++|+|++|+||+++.++.+
T Consensus        75 ~~lv~e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~  139 (286)
T cd07846          75 LYLVFEFVDHTVLDDLEKYP---------------NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVV  139 (286)
T ss_pred             EEEEEecCCccHHHHHHhcc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcE
Confidence            45889999999999887643               248999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .......++..|++||...+. .++.++|+||||+++++++ +|..||...........+....
T Consensus       140 ~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~-~g~~~~~~~~~~~~~~~~~~~~  217 (286)
T cd07846         140 KLCDFGFARTLAAPG-EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEML-TGEPLFPGDSDIDQLYHIIKCL  217 (286)
T ss_pred             EEEeeeeeeeccCCc-cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHH-cCCCCCCCCchHHHHHHHHHHh
Confidence            999999886543222 112234567789999987653 4678899999999999999 7888887655433322222100


Q ss_pred             --------------------ccC---------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 --------------------LCW---------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 --------------------~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                          ..+         ...+.++..+.+++.+||+.+|++||++++++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         218 GNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             CCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence                                000         0123567889999999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.96  E-value=1.6e-29  Score=194.20  Aligned_cols=180  Identities=21%  Similarity=0.281  Sum_probs=148.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.+++.+..               .+++..+..++.|++.|+.|||+.+++|+|++|.||+++.++.+
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~  140 (260)
T cd06606          76 LNIFLEYVSGGSLSSLLKKFG---------------KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVV  140 (260)
T ss_pred             EEEEEEecCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCE
Confidence            458899999999999998653               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~-~~~~~~~~~~~  174 (223)
                      +++|||.+......... ......++..|.+||.......+.++|+|++|+++++++ +|..||.... .......+...
T Consensus       141 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~  219 (260)
T cd06606         141 KLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMA-TGKPPWSELGNPMAALYKIGSS  219 (260)
T ss_pred             EEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCchHHHHHhcccc
Confidence            99999988765443210 123456678899999998888899999999999999999 7999998766 33333333332


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......+...+..+.+++.+|++.+|.+||++.+++.+
T Consensus       220 ~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         220 GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence            23344556678999999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.96  E-value=2.3e-29  Score=198.82  Aligned_cols=176  Identities=18%  Similarity=0.272  Sum_probs=142.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+. |+|.+++...+              ..+++..+..++.|++.|+.|||+.+++|+||+|.||+++.++.+
T Consensus        90 ~~lv~e~~~-~~l~~~~~~~~--------------~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~  154 (308)
T cd06634          90 AWLVMEYCL-GSASDLLEVHK--------------KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLV  154 (308)
T ss_pred             eEEEEEccC-CCHHHHHHHcC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcE
Confidence            337889986 68888886543              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +++|||++......     ....++..|++||.+.   ...++.++|+||+|+++|+++ +|..||...........+..
T Consensus       155 kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~~~~~~~~~~  228 (308)
T cd06634         155 KLGDFGSASIMAPA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNMNAMSALYHIAQ  228 (308)
T ss_pred             EECCcccceeecCc-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHH-cCCCCCccccHHHHHHHHhh
Confidence            99999988644321     2345677899999874   345788999999999999999 79999887766555555444


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      ...........+.++.+++.+||..+|.+||++.+++.+-
T Consensus       229 ~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~  268 (308)
T cd06634         229 NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR  268 (308)
T ss_pred             cCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence            4333333456788899999999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.96  E-value=1.1e-29  Score=199.68  Aligned_cols=179  Identities=17%  Similarity=0.203  Sum_probs=138.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+ +|+|.+++....              ..+++..++.++.||++||.|||+.|++|+||+|+||+++.++.+
T Consensus        77 ~~lv~e~~-~~~L~~~i~~~~--------------~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~  141 (298)
T cd07841          77 INLVFEFM-ETDLEKVIKDKS--------------IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVL  141 (298)
T ss_pred             EEEEEccc-CCCHHHHHhccC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCE
Confidence            45889999 999999997543              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... ........+..|++||.+.+ ..++.++|+||+||++++++ +|..+|...........+....
T Consensus       142 ~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~-~g~~~~~~~~~~~~~~~~~~~~  219 (298)
T cd07841         142 KLADFGLARSFGSPN-RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELL-LRVPFLPGDSDIDQLGKIFEAL  219 (298)
T ss_pred             EEccceeeeeccCCC-ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHH-cCCccccCCccHHHHHHHHHHc
Confidence            999999987543321 11122345677999998754 45788999999999999999 6777777665544333332110


Q ss_pred             cc---------------------C-----CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LC---------------------W-----KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~---------------------~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..                     .     ......+.++.+++.+||+.+|++||++++++.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         220 GTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             CCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            00                     0     0012346788999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.96  E-value=6.2e-29  Score=193.89  Aligned_cols=192  Identities=21%  Similarity=0.327  Sum_probs=143.9

Q ss_pred             hHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCC
Q psy15108          3 LKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKD   82 (223)
Q Consensus         3 ~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~d   82 (223)
                      +.+++..... .....+|+||+ +|+|.+++.....             ..+++..+..++.|++.++.|||+.+++|+|
T Consensus        60 i~~~~~~~~~-~~~~~lv~e~~-~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~d  124 (283)
T cd07830          60 IVKLKEVFRE-NDELYFVFEYM-EGNLYQLMKDRKG-------------KPFSESVIRSIIYQILQGLAHIHKHGFFHRD  124 (283)
T ss_pred             chhHHHHhhc-CCcEEEEEecC-CCCHHHHHHhccc-------------ccCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            3444444333 23355889999 8999999986542             3589999999999999999999999999999


Q ss_pred             CCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCC
Q psy15108         83 IAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPD  161 (223)
Q Consensus        83 i~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~  161 (223)
                      |+|.||+++.++.++++|||++.......  ......++..|++||.+.. ..++.++|+||||+++++++ +|..||..
T Consensus       125 l~~~ni~i~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~-~g~~~~~~  201 (283)
T cd07830         125 LKPENLLVSGPEVVKIADFGLAREIRSRP--PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELY-TLRPLFPG  201 (283)
T ss_pred             CChhhEEEcCCCCEEEeecccceeccCCC--CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHH-hCCCccCC
Confidence            99999999999999999999886543322  1123456778999998743 45788999999999999999 78889976


Q ss_pred             CCHHHHHHHHHhCc-----------------ccCC-----------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        162 LSDDQVLSQLESKK-----------------LCWK-----------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       162 ~~~~~~~~~~~~~~-----------------~~~~-----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .........+....                 ....           .....+..+.+++.+||+.+|++||+++|++.+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         202 SSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             CChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            65543332221100                 0000           011235779999999999999999999999864

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0986|consensus

Probab=99.96  E-value=1.2e-30  Score=204.57  Aligned_cols=173  Identities=21%  Similarity=0.314  Sum_probs=145.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      -+|+.-+.||+|.=.|.+.+.             +.|++..+..++.+|+.||++||+.+|++||+||.|||+|..|+++
T Consensus       261 ClVLtlMNGGDLkfHiyn~g~-------------~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvR  327 (591)
T KOG0986|consen  261 CLVLTLMNGGDLKFHIYNHGN-------------PGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVR  327 (591)
T ss_pred             EEEEEeecCCceeEEeeccCC-------------CCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeE
Confidence            378889999999999988764             5799999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc--
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK--  175 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~--  175 (223)
                      |+|+|+|.......  .....+||..|||||++....|+.++|.|++||++|+|+ .|..||...-...-.+.+.+..  
T Consensus       328 ISDLGLAvei~~g~--~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi-~G~sPFr~~KeKvk~eEvdrr~~~  404 (591)
T KOG0986|consen  328 ISDLGLAVEIPEGK--PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMI-AGHSPFRQRKEKVKREEVDRRTLE  404 (591)
T ss_pred             eeccceEEecCCCC--ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHH-cccCchhhhhhhhhHHHHHHHHhc
Confidence            99999998765544  334558999999999999999999999999999999999 8999997554322222222111  


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTF  206 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~  206 (223)
                      ..-..+.+++++.+++.+.+|+.||.+|...
T Consensus       405 ~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  405 DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             chhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence            2234467889999999999999999999654

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.96  E-value=2e-29  Score=196.84  Aligned_cols=180  Identities=20%  Similarity=0.280  Sum_probs=138.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+. ++|.+++.....             ..+++..+..++.|+++|+.|||+.+++|+||+|.||+++.++.+
T Consensus        74 ~~~v~e~~~-~~l~~~~~~~~~-------------~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~  139 (284)
T cd07860          74 LYLVFEFLH-QDLKKFMDASPL-------------SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI  139 (284)
T ss_pred             EEEEeeccc-cCHHHHHHhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCE
Confidence            458899985 689999976433             468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .......++..|++||...+.. ++.++|+||||+++|+++ +|..||...+......++....
T Consensus       140 ~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~-tg~~p~~~~~~~~~~~~~~~~~  217 (284)
T cd07860         140 KLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRALFPGDSEIDQLFRIFRTL  217 (284)
T ss_pred             EEeeccchhhcccCc-cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHHHh
Confidence            999999876432211 1112234567799999876544 578899999999999999 7899997766543333222110


Q ss_pred             c---------------------cC------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 L---------------------CW------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~---------------------~~------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                     .+      ......+.++++++.+||+.||.+||++++++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         218 GTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             CCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence            0                     00      0012456788999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0596|consensus

Probab=99.96  E-value=7.2e-30  Score=204.43  Aligned_cols=175  Identities=17%  Similarity=0.264  Sum_probs=135.1

Q ss_pred             CCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCC
Q psy15108         22 KPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS  101 (223)
Q Consensus        22 ~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df  101 (223)
                      .+|-..+|..+|++...              ....-.++.+..|++.|+.++|..||+|.|+||.|+++- .|.+|++||
T Consensus       439 mE~Gd~DL~kiL~k~~~--------------~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDF  503 (677)
T KOG0596|consen  439 MECGDIDLNKILKKKKS--------------IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDF  503 (677)
T ss_pred             eecccccHHHHHHhccC--------------CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeee
Confidence            34567889999997654              233338889999999999999999999999999999875 468999999


Q ss_pred             CCCcccchhh-hhhhhcCCcccccccccccccCC-----------CCcccchHHHHHHHHHHHhCCCCCCCCCC-HHHHH
Q psy15108        102 GLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDE-----------FSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVL  168 (223)
Q Consensus       102 ~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~-----------~~~~~Di~slG~il~~l~~~~~~p~~~~~-~~~~~  168 (223)
                      |++....... ........||+.|++||++....           .+.++||||+|||+|+|+ +|+.||.... ....+
T Consensus       504 GIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv-YgktPf~~~~n~~aKl  582 (677)
T KOG0596|consen  504 GIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMV-YGKTPFGQIINQIAKL  582 (677)
T ss_pred             chhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHH-hcCCchHHHHHHHHHH
Confidence            9998765443 22334568999999999975322           567899999999999999 8999997665 33444


Q ss_pred             HHHHhCcccCCCCCC-ChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        169 SQLESKKLCWKHSSK-TPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       169 ~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..|....-..+.+.- -..++.++|+.||+.||++||++.+++++
T Consensus       583 ~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  583 HAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             HhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            445544332232221 13348999999999999999999999976

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.96  E-value=3.3e-29  Score=196.58  Aligned_cols=178  Identities=16%  Similarity=0.243  Sum_probs=145.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++++|.+++..                ..+++..+..++.|++.|++|||+.|++|+||+|.||+++.++.+
T Consensus        92 ~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~  155 (292)
T cd06657          92 LWVVMEFLEGGALTDIVTH----------------TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRV  155 (292)
T ss_pred             EEEEEecCCCCcHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCE
Confidence            4588999999999998853                247999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|++||.+....++.++|+||+|+++|+++ +|..||......+....+.....
T Consensus       156 ~l~dfg~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~-tg~~p~~~~~~~~~~~~~~~~~~  233 (292)
T cd06657         156 KLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV-DGEPPYFNEPPLKAMKMIRDNLP  233 (292)
T ss_pred             EEcccccceeccccc-ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhhCC
Confidence            999999876443221 1122345677899999988778889999999999999999 79999987776655554443311


Q ss_pred             -cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 -CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       ........+..+.+++.+||..+|.+||++.+++.+
T Consensus       234 ~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         234 PKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             cccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence             222334568889999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.96  E-value=1.5e-29  Score=198.07  Aligned_cols=181  Identities=16%  Similarity=0.187  Sum_probs=142.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++....               .+++..+..++.|+++||.|||+.+++|+||+|.||+++.++.+
T Consensus        80 ~~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~  144 (288)
T cd05583          80 LHLILDYVNGGELFTHLYQRE---------------HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHV  144 (288)
T ss_pred             EEEEEecCCCCcHHHHHhhcC---------------CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCE
Confidence            338899999999999997543               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCC--CCcccchHHHHHHHHHHHhCCCCCCCCCCH----HHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVLSQ  170 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~Di~slG~il~~l~~~~~~p~~~~~~----~~~~~~  170 (223)
                      +++|||++...............++..|++||...+..  .+.++|+||+|+++++|+ +|..||.....    .+....
T Consensus       145 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~-tg~~p~~~~~~~~~~~~~~~~  223 (288)
T cd05583         145 VLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELL-TGASPFTVDGEQNSQSEISRR  223 (288)
T ss_pred             EEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHH-hCCCCcccCcccchHHHHHHH
Confidence            99999988654333222222345678899999986654  678999999999999999 79999864322    222222


Q ss_pred             HHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      +...  ..+.+..++..+.+++.+||+.+|++|||+.++.+.|..
T Consensus       224 ~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         224 ILKS--KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             HHcc--CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence            2222  234455678889999999999999999998777655543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0584|consensus

Probab=99.96  E-value=6.5e-30  Score=207.31  Aligned_cols=187  Identities=17%  Similarity=0.253  Sum_probs=156.6

Q ss_pred             HHHHHhhc--CCC-C-CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC--Cc
Q psy15108          5 QFLLATRK--DSK-D-KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK--RL   78 (223)
Q Consensus         5 ~~~~~~~~--~~~-~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--~i   78 (223)
                      ||++.+.+  +.. + ..+|.|-+..|+|..|++..+.               ++...+..|++||++||.|||++  .|
T Consensus       102 NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~---------------vn~kaik~W~RQILkGL~yLHs~~PPI  166 (632)
T KOG0584|consen  102 NIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRR---------------VNIKAIKSWCRQILKGLVYLHSQDPPI  166 (632)
T ss_pred             ceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhcc---------------CCHHHHHHHHHHHHHHhhhhhcCCCCc
Confidence            45555554  222 2 5588999999999999998866               99999999999999999999987  69


Q ss_pred             ccCCCCCCCeeeecC-CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCC
Q psy15108         79 IHKDIAARNCLISSD-LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEM  157 (223)
Q Consensus        79 ~H~di~~~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~  157 (223)
                      +|||||=.||+++++ |.|||+|+|+|.......   ....+||+.|||||... ..|+..+||||||..+.||+ ++.+
T Consensus       167 IHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMv-T~eY  241 (632)
T KOG0584|consen  167 IHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMV-TSEY  241 (632)
T ss_pred             cccccccceEEEcCCcCceeecchhHHHHhhccc---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHH-hccC
Confidence            999999999999877 889999999997543332   23368999999999975 67999999999999999999 7888


Q ss_pred             CCC-CCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        158 PFP-DLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       158 p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ||. ..+..++++.+..+..+-....--.+++++||.+|+.. ...|+++.|++.+
T Consensus       242 PYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  242 PYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             ChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence            985 56778899998888544444444578899999999999 8999999999876

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.96  E-value=6.2e-29  Score=196.82  Aligned_cols=174  Identities=16%  Similarity=0.276  Sum_probs=141.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+. |+|.+++...+              .++++..+..++.|++.|+.|||+.|++|+||+|.||+++.++.++
T Consensus        97 ~lv~e~~~-~~l~~~l~~~~--------------~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~k  161 (313)
T cd06633          97 WLVMEYCL-GSASDLLEVHK--------------KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVK  161 (313)
T ss_pred             EEEEecCC-CCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEE
Confidence            37888885 68888886543              3589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++|||++.....     .....++..|++||.+.   ...++.++|+||+|+++|+++ +|..||...+.......+...
T Consensus       162 L~dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~-~g~~p~~~~~~~~~~~~~~~~  235 (313)
T cd06633         162 LADFGSASKSSP-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNMNAMSALYHIAQN  235 (313)
T ss_pred             EeecCCCcccCC-----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHhc
Confidence            999998754321     12345677899999974   345788999999999999999 799999887766655555444


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..........+..+.+++.+||+.+|.+||++.+++.+
T Consensus       236 ~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         236 DSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            33333334567789999999999999999999999865

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.96  E-value=2.5e-29  Score=195.97  Aligned_cols=179  Identities=20%  Similarity=0.252  Sum_probs=139.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+. ++|.+++....              ..+++..++.++.|+++|+.|||+.+++|+||+|+||+++.++.+
T Consensus        73 ~~~v~e~~~-~~l~~~l~~~~--------------~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~  137 (283)
T cd05118          73 LYLVFEFMD-TDLYKLIKDRQ--------------RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVL  137 (283)
T ss_pred             EEEEEeccC-CCHHHHHHhhc--------------ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcE
Confidence            447888886 48998887643              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||.+....... .......++..|.+||.+... .++.++|+||+|+++++++ +|+.||...+..+....+....
T Consensus       138 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~-tg~~~~~~~~~~~~~~~~~~~~  215 (283)
T cd05118         138 KLADFGLARSFGSPV-RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELL-SRRPLFPGKSEIDQLFKIFRTL  215 (283)
T ss_pred             EEeeeeeeEecCCCc-ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHc
Confidence            999999886543322 112234566779999998766 6788999999999999999 7899998776544333322110


Q ss_pred             cc----------------------------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LC----------------------------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~----------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..                            .......+.++.+++.+||+.||.+||++.+++.+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         216 GTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             CCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            00                            00112357789999999999999999999999864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG1035|consensus

Probab=99.96  E-value=1.1e-29  Score=218.38  Aligned_cols=174  Identities=22%  Similarity=0.318  Sum_probs=138.2

Q ss_pred             CCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEc
Q psy15108         20 SGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS   99 (223)
Q Consensus        20 v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~   99 (223)
                      =||||+..+|++++..+..              .-..+..++++.||++||.|+|++|++||||||.||+++..+.+||+
T Consensus       674 QMEyCE~~ll~~iI~~N~~--------------~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIG  739 (1351)
T KOG1035|consen  674 QMEYCEKTLLRDIIRRNHF--------------NSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIG  739 (1351)
T ss_pred             EHhhhhhhHHHHHHHhccc--------------chhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeec
Confidence            3899999999999987654              11578999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccc----hh-------------hhhhhhcCCcccccccccccccCC---CCcccchHHHHHHHHHHHhCCCCCC
Q psy15108        100 LSGLSKDTY----QK-------------EYYKYRNAILPLRWLPYEAVFDDE---FSTKSDVYAYACLIWEIFNKGEMPF  159 (223)
Q Consensus       100 df~~~~~~~----~~-------------~~~~~~~~~~~~~~~~pe~~~~~~---~~~~~Di~slG~il~~l~~~~~~p~  159 (223)
                      |||++....    ..             ........+||.-|+|||.+.+..   |+.++|+||+||+++||+ +   ||
T Consensus       740 DFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~-y---PF  815 (1351)
T KOG1035|consen  740 DFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEML-Y---PF  815 (1351)
T ss_pred             ccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHh-c---cC
Confidence            999997621    00             011234568889999999987655   899999999999999999 3   45


Q ss_pred             C-CCCHHHHHHHHHhCcccCC---CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        160 P-DLSDDQVLSQLESKKLCWK---HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       160 ~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      . .+....++..+..+..+.+   ..+..+. -.++|++|++.||.+|||+.|++..
T Consensus       816 ~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~-e~slI~~Ll~hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  816 GTSMERASILTNLRKGSIPEPADFFDPEHPE-EASLIRWLLSHDPSKRPTATELLNS  871 (1351)
T ss_pred             CchHHHHHHHHhcccCCCCCCcccccccchH-HHHHHHHHhcCCCccCCCHHHHhhc
Confidence            4 3345566666666544444   2234444 4679999999999999999999853

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.96  E-value=4.2e-29  Score=216.12  Aligned_cols=196  Identities=13%  Similarity=0.145  Sum_probs=147.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++|||+++|+|.++++......    .........++...++.++.||++||.|||+.|++||||||+||+++.++.++
T Consensus        78 yLVMEY~eGGSL~~lL~s~~~~~----~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vK  153 (932)
T PRK13184         78 YYTMPYIEGYTLKSLLKSVWQKE----SLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVV  153 (932)
T ss_pred             EEEEEcCCCCCHHHHHHHhhhcc----ccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEE
Confidence            37899999999999997532200    00011123567888999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh-----------------hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCC
Q psy15108         98 ISLSGLSKDTYQKE-----------------YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP  160 (223)
Q Consensus        98 l~df~~~~~~~~~~-----------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~  160 (223)
                      ++|||++.......                 ........+++.|+|||.+.+..++.++|+||+||++++|+ +|..||.
T Consensus       154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELL-TG~~PF~  232 (932)
T PRK13184        154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQML-TLSFPYR  232 (932)
T ss_pred             EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHH-HCCCCCC
Confidence            99999987541110                 00112246789999999998888999999999999999999 7999998


Q ss_pred             CCCHHHHHHHH-HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHhh
Q psy15108        161 DLSDDQVLSQL-ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-TFPSIVTQLSDAMC  218 (223)
Q Consensus       161 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-s~~~ll~~L~~~~~  218 (223)
                      ........... ............+++.+.+++.+|++.||++|+ +++++++.|+..+.
T Consensus       233 ~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        233 RKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             CcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            75544332221 111111112246788899999999999999996 56777787777654

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.96  E-value=2.5e-29  Score=196.15  Aligned_cols=180  Identities=19%  Similarity=0.230  Sum_probs=138.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+ +++|.+++.....             ..+++..++.++.|+++||.|||+.+++|+||+|.||+++.++.+
T Consensus        73 ~~iv~e~~-~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~  138 (283)
T cd07835          73 LYLVFEFL-DLDLKKYMDSSPL-------------TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGAL  138 (283)
T ss_pred             EEEEEecc-CcCHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcE
Confidence            44788888 4799999976542             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .......++..|++||.+.+. .++.++|+||+|+++|+++ +|..||...........+....
T Consensus       139 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~-~g~~pf~~~~~~~~~~~~~~~~  216 (283)
T cd07835         139 KLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMV-NRRPLFPGDSEIDQLFRIFRTL  216 (283)
T ss_pred             EEeecccccccCCCc-cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHh
Confidence            999999986442211 111223446779999987654 4688999999999999999 7999998766543332221100


Q ss_pred             ---------------------cc------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ---------------------LC------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ---------------------~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                           ..      .......+..+.+++.+||+.+|.+||++++++.+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         217 GTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             CCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence                                 00      01124566889999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0696|consensus

Probab=99.96  E-value=2.9e-29  Score=195.43  Aligned_cols=180  Identities=18%  Similarity=0.258  Sum_probs=159.0

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCC
Q psy15108          7 LLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR   86 (223)
Q Consensus         7 ~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~   86 (223)
                      ++-|-+.-++...||||+.||+|-=.|++-+.               |-+..+..++.+|+-||-+||++||++||+|..
T Consensus       415 lHScFQTmDRLyFVMEyvnGGDLMyhiQQ~Gk---------------FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLD  479 (683)
T KOG0696|consen  415 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGK---------------FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLD  479 (683)
T ss_pred             HHHHhhhhhheeeEEEEecCchhhhHHHHhcc---------------cCCchhhhhhHHHHHHhhhhhcCCeeeeecccc
Confidence            44555666677799999999999999988755               999999999999999999999999999999999


Q ss_pred             CeeeecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy15108         87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ  166 (223)
Q Consensus        87 nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~  166 (223)
                      ||+++..|++|+.|||+++...-. .....+..+|+.|+|||.+.+.+|..++|.|++|+++|||+ -|+.||.+.+..+
T Consensus       480 NvmLd~eGHiKi~DFGmcKEni~~-~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEml-aGQpPFdGeDE~e  557 (683)
T KOG0696|consen  480 NVMLDSEGHIKIADFGMCKENIFD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML-AGQPPFDGEDEDE  557 (683)
T ss_pred             ceEeccCCceEeeecccccccccC-CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHH-cCCCCCCCCCHHH
Confidence            999999999999999998753222 22346678999999999999999999999999999999999 7999999999999


Q ss_pred             HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy15108        167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT  205 (223)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps  205 (223)
                      ....|+....  ..+..++.+..++....+...|.+|..
T Consensus       558 lF~aI~ehnv--syPKslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  558 LFQAIMEHNV--SYPKSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             HHHHHHHccC--cCcccccHHHHHHHHHHhhcCCccccC
Confidence            9999988653  457788999999999999999999954

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.96  E-value=5.7e-29  Score=195.25  Aligned_cols=182  Identities=21%  Similarity=0.286  Sum_probs=138.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec-CCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~-~~~~   96 (223)
                      .+++||+.+ +|.+++.....          .....+++..++.++.||++||.|||+.+++|+||+|+||+++. ++.+
T Consensus        82 ~lv~e~~~~-~l~~~~~~~~~----------~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~  150 (295)
T cd07837          82 YLVFEYLDS-DLKKFMDSNGR----------GPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLL  150 (295)
T ss_pred             EEEeeccCc-CHHHHHHHhcc----------cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeE
Confidence            478899885 89999876543          01246899999999999999999999999999999999999998 7899


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .......+++.|+|||.+.+ ..++.++|+||+|+++|+|+ +|..||.+.+..+....+....
T Consensus       151 kl~dfg~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~-~g~~~~~~~~~~~~~~~~~~~~  228 (295)
T cd07837         151 KIADLGLGRAFSIPV-KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMS-RKQPLFPGDSELQQLLHIFKLL  228 (295)
T ss_pred             EEeecccceecCCCc-cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHH-cCCCCCCCCCHHHHHHHHHHHh
Confidence            999999886542211 11122345677999998764 45788999999999999999 7999998776554433322110


Q ss_pred             c-----cC---------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 L-----CW---------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~-----~~---------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .     .+                     ......+.++.++|.+||..+|.+||++++++.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            0     00                     0013467889999999999999999999999864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.96  E-value=3e-29  Score=200.35  Aligned_cols=178  Identities=17%  Similarity=0.225  Sum_probs=137.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|++|+. |+|.+++...               ..+++..+..++.|+++||.|||+.+++|+||+|+||+++.++.++
T Consensus        84 ~lv~e~~~-~~l~~~~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~k  147 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSD---------------QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELR  147 (334)
T ss_pred             EEEEehhh-hhHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEE
Confidence            47888885 6899998654               3489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhh---hhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         98 ISLSGLSKDTYQKEYY---KYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        98 l~df~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      ++|||++.........   ......++..|++||.+.. ..++.++|+||+|+++|+|+ +|..||.+.+.......+..
T Consensus       148 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~-~g~~pf~~~~~~~~~~~~~~  226 (334)
T cd07855         148 IGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEML-GRRQLFPGKNYVHQLKLILS  226 (334)
T ss_pred             ecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHH-cCCCccCCCChHHHHHHHHH
Confidence            9999998654322211   1123456788999998765 45788999999999999999 89999977654332221111


Q ss_pred             ------------------------CcccCCC-----CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 ------------------------KKLCWKH-----SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ------------------------~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                              .......     ....+.++.+++.+||+.+|.+||++++++.+
T Consensus       227 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         227 VLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             HhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence                                    0000000     13457889999999999999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.96  E-value=3.6e-29  Score=201.30  Aligned_cols=174  Identities=17%  Similarity=0.287  Sum_probs=136.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+. ++|.+.+..                 .+++..+..++.|++.||.|||+.|++|+||||.||+++.++.++
T Consensus        97 ~lv~e~~~-~~l~~~~~~-----------------~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~k  158 (353)
T cd07850          97 YLVMELMD-ANLCQVIQM-----------------DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK  158 (353)
T ss_pred             EEEEeccC-CCHHHHHhh-----------------cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEE
Confidence            37788885 588888853                 388999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC---
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK---  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~---  174 (223)
                      ++|||++.......  ......++..|++||.+.+..++.++|+||+||++++|+ +|..||...+.......+...   
T Consensus       159 L~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~-~g~~pf~~~~~~~~~~~~~~~~~~  235 (353)
T cd07850         159 ILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-RGTVLFPGTDHIDQWNKIIEQLGT  235 (353)
T ss_pred             EccCccceeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHH-HCCCCCCCCCHHHHHHHHHHhcCC
Confidence            99999987543321  122335677899999998888999999999999999999 799999866543332222110   


Q ss_pred             -------------------ccc--------------CC-----CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 -------------------KLC--------------WK-----HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 -------------------~~~--------------~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                         ...              .+     .....++.+.+++.+||+.||++||++.+++.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         236 PSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             CCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                               000              00     011345678999999999999999999999876

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=4.2e-29  Score=199.75  Aligned_cols=181  Identities=20%  Similarity=0.273  Sum_probs=140.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++++|+. ++|.++++..               +.+++..+..++.|+++|+.|||+.+++|+||+|+||+++.++.++
T Consensus        85 ~lv~e~~~-~~L~~~~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~k  148 (337)
T cd07858          85 YIVYELMD-TDLHQIIRSS---------------QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLK  148 (337)
T ss_pred             EEEEeCCC-CCHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEE
Confidence            47788875 7899999754               3599999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC--
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK--  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~--  174 (223)
                      ++|||++....... .......++..|++||.+.. ..++.++|+||+|+++|+|+ +|..||.+.+.......+...  
T Consensus       149 L~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~~  226 (337)
T cd07858         149 ICDFGLARTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELL-GRKPLFPGKDYVHQLKLITELLG  226 (337)
T ss_pred             ECcCccccccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHH-cCCCCCCCCChHHHHHHHHHHhC
Confidence            99999987543321 11123355778999998764 45889999999999999999 899999766543322221110  


Q ss_pred             ---------------------ccc------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH--HHHH
Q psy15108        175 ---------------------KLC------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ--LSDA  216 (223)
Q Consensus       175 ---------------------~~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~--L~~~  216 (223)
                                           ...      ......++.++.+++.+||+.+|++||++++++++  +..+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         227 SPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             CCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence                                 000      00123567889999999999999999999999988  5544

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.96  E-value=3.7e-29  Score=195.97  Aligned_cols=177  Identities=16%  Similarity=0.207  Sum_probs=139.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+++++|.+++..++               .+++..+..++.|+++||.|||+.|++|+||+|+||+++.++.++
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~k  145 (290)
T cd05613          81 HLILDYINGGELFTHLSQRE---------------RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV  145 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEE
Confidence            38899999999999998653               489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD--EFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVLSQL  171 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~Di~slG~il~~l~~~~~~p~~~~~~----~~~~~~~  171 (223)
                      ++|||++...............++..|++||.+...  .++.++|+||+|+++|+++ +|..||.....    ......+
T Consensus       146 l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll-~g~~p~~~~~~~~~~~~~~~~~  224 (290)
T cd05613         146 LTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELL-TGASPFTVDGEKNSQAEISRRI  224 (290)
T ss_pred             EeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHh-cCCCCCCcCCccccHHHHHHHh
Confidence            999998875433222222234567789999998643  3678899999999999999 79999864332    2223333


Q ss_pred             HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                      ...  ..+.+..++..+.+++.+||+.+|.+||     ++++++.+
T Consensus       225 ~~~--~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         225 LKS--EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             hcc--CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            222  2333556788899999999999999997     67777664

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.96  E-value=5.8e-29  Score=195.14  Aligned_cols=179  Identities=18%  Similarity=0.261  Sum_probs=139.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+. ++|.+++.....              .+++..++.++.|+++||.|||+.+++|+||+|+||+++.++.+
T Consensus        81 ~~lv~e~~~-~~L~~~~~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~  145 (293)
T cd07843          81 IYMVMEYVE-HDLKSLMETMKQ--------------PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGIL  145 (293)
T ss_pred             EEEEehhcC-cCHHHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcE
Confidence            447888887 599999976432              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||.+....... .......++..|++||.+.+.. ++.++|+||+|+++++|+ +|..||...........+....
T Consensus       146 ~l~d~g~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~-~g~~~f~~~~~~~~~~~~~~~~  223 (293)
T cd07843         146 KICDFGLAREYGSPL-KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELL-TKKPLFPGKSEIDQLNKIFKLL  223 (293)
T ss_pred             EEeecCceeeccCCc-cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHh
Confidence            999999887554321 1122345577899999886544 688999999999999999 7999998776554443332110


Q ss_pred             -----------------------------ccCCCCCC-ChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 -----------------------------LCWKHSSK-TPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 -----------------------------~~~~~~~~-~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                                   .....+.. .++.+.+++.+||+.+|++||+++|++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         224 GTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             CCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence                                         00001111 47788999999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.96  E-value=4.9e-29  Score=197.03  Aligned_cols=179  Identities=18%  Similarity=0.186  Sum_probs=140.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+. ++|.+++....              ..+++..+..++.|+++|+.|||+.|++|+||+|+||+++.++.+
T Consensus        83 ~~lv~e~~~-~~l~~~l~~~~--------------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~  147 (309)
T cd07845          83 IFLVMEYCE-QDLASLLDNMP--------------TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCL  147 (309)
T ss_pred             EEEEEecCC-CCHHHHHHhcc--------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCE
Confidence            347788886 58999987542              358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... ........+..|++||.+.+ ..++.++|+||+|+++|+++ +|..||...+..+....+....
T Consensus       148 kL~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~-~g~~~f~~~~~~~~~~~~~~~~  225 (309)
T cd07845         148 KIADFGLARTYGLPA-KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELL-AHKPLLPGKSEIEQLDLIIQLL  225 (309)
T ss_pred             EECccceeeecCCcc-CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHhc
Confidence            999999887543321 11122234667999999865 45788999999999999999 7999998887766655543310


Q ss_pred             c-------------------cCC-C--------CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 L-------------------CWK-H--------SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~-------------------~~~-~--------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                   ... .        ....++++.+++.+|++.||++||++++++.|
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         226 GTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             CCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            0                   000 0        01246778999999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.96  E-value=6.6e-29  Score=193.99  Aligned_cols=178  Identities=20%  Similarity=0.297  Sum_probs=139.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+. ++|.+++.....             ..+++..++.++.|+++||.|||+.+++|+|++|.||+++.++.++
T Consensus        82 ~l~~e~~~-~~l~~~l~~~~~-------------~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~  147 (287)
T cd07838          82 TLVFEHVD-QDLATYLSKCPK-------------PGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVK  147 (287)
T ss_pred             EEEehhcc-cCHHHHHHHccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEE
Confidence            36677776 589999876432             3589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc--
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK--  175 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~--  175 (223)
                      ++|||++.......  ......++..|++||.+.+..++.++|+||+|+++|+|+ +|..||......+....+....  
T Consensus       148 l~dfg~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~  224 (287)
T cd07838         148 IADFGLARIYSFEM--ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELF-RRRPLFRGTSEADQLDKIFDVIGL  224 (287)
T ss_pred             EeccCcceeccCCc--ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHH-hCCCcccCCChHHHHHHHHHHcCC
Confidence            99999886543222  112234567799999998888899999999999999999 7898998777655544443210  


Q ss_pred             ---ccCC--------------------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ---LCWK--------------------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ---~~~~--------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                         ..++                    .....+..+.+++.+||+.||.+||++++++.+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         225 PSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             CChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence               0000                    001235677899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.96  E-value=5e-29  Score=198.57  Aligned_cols=181  Identities=22%  Similarity=0.258  Sum_probs=136.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++++|+.+|+|.+++.....             ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++
T Consensus        75 ~~v~e~~~~~~l~~~l~~~~~-------------~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~  141 (328)
T cd08226          75 WVISPFMAYGSANSLLKTYFP-------------EGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVS  141 (328)
T ss_pred             EEEEecccCCCHHHHHHhhcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEE
Confidence            368899999999999987533             3589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhh------hhhhcCCcccccccccccccC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEY------YKYRNAILPLRWLPYEAVFDD--EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS  169 (223)
Q Consensus        98 l~df~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~--~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~  169 (223)
                      +.||+.+........      .......++..|++||.+.+.  .++.++|+||+||++++++ +|..||..........
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~-~g~~p~~~~~~~~~~~  220 (328)
T cd08226         142 LSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELA-TGRVPFQDMLRTQMLL  220 (328)
T ss_pred             EechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHH-hCCCCCCCcChHHHHH
Confidence            999875432211100      000112234569999998653  4678999999999999999 7999998766544332


Q ss_pred             HHHhCcc---------------------------------------------cCCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy15108        170 QLESKKL---------------------------------------------CWKHSSKTPEYITSLHEKCIHPHPHQRP  204 (223)
Q Consensus       170 ~~~~~~~---------------------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rp  204 (223)
                      .......                                             ..+....++..+.+++++||+.||++||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp  300 (328)
T cd08226         221 QKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRP  300 (328)
T ss_pred             HHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCC
Confidence            2211100                                             0111223567789999999999999999


Q ss_pred             CHHHHHHH
Q psy15108        205 TFPSIVTQ  212 (223)
Q Consensus       205 s~~~ll~~  212 (223)
                      |+++++++
T Consensus       301 ta~e~l~~  308 (328)
T cd08226         301 SASSLLSH  308 (328)
T ss_pred             CHHHHhhC
Confidence            99999866

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.96  E-value=1.1e-28  Score=193.92  Aligned_cols=178  Identities=14%  Similarity=0.238  Sum_probs=137.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~   95 (223)
                      ..++++|+ +++|.+++....              ..+++..+..++.|+++|+.|||+ .+++|+||+|.||+++.++.
T Consensus        89 ~~~v~e~~-~~~l~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~  153 (296)
T cd06618          89 VFICMELM-STCLDKLLKRIQ--------------GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGN  153 (296)
T ss_pred             EEEEeecc-CcCHHHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCC
Confidence            33677776 568888876532              268999999999999999999997 59999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCC----CCcccchHHHHHHHHHHHhCCCCCCCCCCH-HHHHHH
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE----FSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQ  170 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~----~~~~~Di~slG~il~~l~~~~~~p~~~~~~-~~~~~~  170 (223)
                      ++++|||++.......  ......++..|++||.+....    ++.++|+||||+++|+++ +|+.||..... .+....
T Consensus       154 ~kL~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~~~~~~~~  230 (296)
T cd06618         154 VKLCDFGISGRLVDSK--AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELA-TGQFPYKNCKTEFEVLTK  230 (296)
T ss_pred             EEECccccchhccCCC--cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHH-hCCCCCCcchhHHHHHHH
Confidence            9999999886543221  112234567799999986543    778999999999999999 79999976433 233333


Q ss_pred             HHhCc-ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        171 LESKK-LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       171 ~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +.... ...+....++.++.+++.+||+.+|.+||++.+++.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         231 ILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            33322 2222223478899999999999999999999999876

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0669|consensus

Probab=99.96  E-value=6e-29  Score=182.38  Aligned_cols=195  Identities=19%  Similarity=0.267  Sum_probs=147.4

Q ss_pred             chHHHHHHhhcCCCC----CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q psy15108          2 DLKQFLLATRKDSKD----KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR   77 (223)
Q Consensus         2 ~~~~~~~~~~~~~~~----~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~   77 (223)
                      |++++++.+.....+    ..+||.+|+ .+|.-+|.....              .++...+.+++.++++||.|+|...
T Consensus        80 nliEic~tk~Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~~v--------------r~sls~Ikk~Mk~Lm~GL~~iHr~k  144 (376)
T KOG0669|consen   80 NLIEICRTKATPTNRDRATFYLVFDFCE-HDLAGLLSNRKV--------------RFSLSEIKKVMKGLMNGLYYIHRNK  144 (376)
T ss_pred             HHHHHHhhccCCcccccceeeeeHHHhh-hhHHHHhcCccc--------------cccHHHHHHHHHHHHHHHHHHHHhh
Confidence            344555554444444    337777776 478888875543              6999999999999999999999999


Q ss_pred             cccCCCCCCCeeeecCCCeEEcCCCCCcccchhh---hhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHh
Q psy15108         78 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE---YYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFN  153 (223)
Q Consensus        78 i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~  153 (223)
                      |+|||+|+.|++++.++.+++.|||+++.+....   ...+...+.|.+|++||.+.+ +.|+.+.|+|..||++.+|+ 
T Consensus       145 ilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMw-  223 (376)
T KOG0669|consen  145 ILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMW-  223 (376)
T ss_pred             HHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHH-
Confidence            9999999999999999999999999997664432   112345677899999999875 45899999999999999999 


Q ss_pred             CCCCCCCCCCHHHHHHHHHh-----CcccCCC---------------C-------------CCChHHHHHHHHHhcCCCC
Q psy15108        154 KGEMPFPDLSDDQVLSQLES-----KKLCWKH---------------S-------------SKTPEYITSLHEKCIHPHP  200 (223)
Q Consensus       154 ~~~~p~~~~~~~~~~~~~~~-----~~~~~~~---------------~-------------~~~~~~~~~li~~~l~~dp  200 (223)
                      ++..-+.+....+.+..|..     .+..|+.               +             -.-.++..+++.+++..||
T Consensus       224 trspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP  303 (376)
T KOG0669|consen  224 TRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDP  303 (376)
T ss_pred             ccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCc
Confidence            78877777766555444322     0011111               0             0113467789999999999


Q ss_pred             CCCCCHHHHHHH
Q psy15108        201 HQRPTFPSIVTQ  212 (223)
Q Consensus       201 ~~Rps~~~ll~~  212 (223)
                      .+|+++++++.|
T Consensus       304 ~kR~~ad~alnh  315 (376)
T KOG0669|consen  304 TKRIDADQALNH  315 (376)
T ss_pred             ccCcchHhhhch
Confidence            999999999866

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.96  E-value=2.7e-28  Score=190.08  Aligned_cols=181  Identities=21%  Similarity=0.269  Sum_probs=140.6

Q ss_pred             CCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC
Q psy15108         15 KDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL   94 (223)
Q Consensus        15 ~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~   94 (223)
                      ....+++||+. ++|.+++.....              .+++..+..++.+++.|+.+||+.|++|+||+|.||+++.++
T Consensus        71 ~~~~~v~e~~~-~~l~~~i~~~~~--------------~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~  135 (282)
T cd07829          71 RKLYLVFEYCD-MDLKKYLDKRPG--------------PLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG  135 (282)
T ss_pred             CceEEEecCcC-cCHHHHHHhhcc--------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCC
Confidence            34558889887 599999987532              589999999999999999999999999999999999999999


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      .++++|||.+........ .......+..|++||.+... .++.++|+|++|+++++++ +|..||......+....+..
T Consensus       136 ~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~-~~~~~~~~~~~~~~~~~~~~  213 (282)
T cd07829         136 VLKLADFGLARAFGIPLR-TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMI-TGKPLFPGDSEIDQLFKIFQ  213 (282)
T ss_pred             CEEEecCCcccccCCCcc-ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHH-hCCCCCCCccHHHHHHHHHH
Confidence            999999998865432211 12223445679999998766 6888999999999999999 78999987765544333321


Q ss_pred             Cc------------------ccC---------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KK------------------LCW---------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~------------------~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..                  ...         ...+..+..+.+++..||..+|++||++.+++.+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         214 ILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             HhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence            00                  000         0112346789999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.96  E-value=4.8e-29  Score=197.63  Aligned_cols=186  Identities=18%  Similarity=0.235  Sum_probs=131.6

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeee----ecCC
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI----SSDL   94 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~----~~~~   94 (223)
                      ++++|+. ++|.+++.......      .......+++..+..++.|++.||.|||+.+++|+||||+||++    +.++
T Consensus        77 lv~e~~~-~~l~~~~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~  149 (317)
T cd07867          77 LLFDYAE-HDLWHIIKFHRASK------ANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG  149 (317)
T ss_pred             EEEeeeC-CcHHHHHHhhhccc------cCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCC
Confidence            6677765 58888887543210      00122358999999999999999999999999999999999999    4557


Q ss_pred             CeEEcCCCCCcccchhh--hhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHH------
Q psy15108         95 SVKISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD------  165 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~------  165 (223)
                      .++++|||+++......  ........++..|+|||.+.+. .++.++|+||+||++|+|+ +|..||......      
T Consensus       150 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~-tg~~~f~~~~~~~~~~~~  228 (317)
T cd07867         150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNP  228 (317)
T ss_pred             cEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHH-hCCCCccccccccccccc
Confidence            89999999987543321  1112334667889999998764 4788999999999999999 799898643211      


Q ss_pred             ---HHHHHHHh---------------Cc--------c-c------------CCCCCCChHHHHHHHHHhcCCCCCCCCCH
Q psy15108        166 ---QVLSQLES---------------KK--------L-C------------WKHSSKTPEYITSLHEKCIHPHPHQRPTF  206 (223)
Q Consensus       166 ---~~~~~~~~---------------~~--------~-~------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~  206 (223)
                         .....+..               ..        . .            .......+..+.+++.+|++.||.+|||+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~  308 (317)
T cd07867         229 FHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITS  308 (317)
T ss_pred             ccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCH
Confidence               00000000               00        0 0            00011224567889999999999999999


Q ss_pred             HHHHHH
Q psy15108        207 PSIVTQ  212 (223)
Q Consensus       207 ~~ll~~  212 (223)
                      +|+++|
T Consensus       309 ~e~l~h  314 (317)
T cd07867         309 EQALQD  314 (317)
T ss_pred             HHHhcC
Confidence            999865

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.96  E-value=4.2e-29  Score=194.97  Aligned_cols=180  Identities=19%  Similarity=0.285  Sum_probs=139.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+. ++|.+++....              ..+++..++.++.|+++|+.+||+.|++|+||+|.||+++.++.+
T Consensus        75 ~~lv~e~~~-~~l~~~~~~~~--------------~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~  139 (287)
T cd07840          75 IYMVFEYMD-HDLTGLLDSPE--------------VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVL  139 (287)
T ss_pred             EEEEecccc-ccHHHHHhccC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCE
Confidence            447888887 58999987542              258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++...............++..|++||.+.+ ..++.++|+||||+++++++ +|..||...+.......+....
T Consensus       140 ~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~-t~~~p~~~~~~~~~~~~~~~~~  218 (287)
T cd07840         140 KLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELF-LGKPIFQGSTELEQLEKIFELC  218 (287)
T ss_pred             EEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHh
Confidence            999999887554332111223455677999998764 35788999999999999999 7899998777655444432210


Q ss_pred             c-----cCC-----------------------CCCC-ChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 L-----CWK-----------------------HSSK-TPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~-----~~~-----------------------~~~~-~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .     .++                       .... ++..+.+++.+||..+|.+||++++++.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         219 GSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             CCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            0     000                       0011 37788999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.96  E-value=1.4e-28  Score=197.24  Aligned_cols=172  Identities=20%  Similarity=0.284  Sum_probs=137.2

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|++|+ +++|.+++..                .++++..+..++.|+++|+.|||+.|++|+||+|.||+++.++.+++
T Consensus        97 lv~e~~-~~~L~~~~~~----------------~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL  159 (343)
T cd07851          97 LVTHLM-GADLNNIVKC----------------QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI  159 (343)
T ss_pred             EEEecC-CCCHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEE
Confidence            666666 7899999964                25899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      +|||++......    .....++..|++||.+.. ..++.++|+||+|+++++++ +|..||........+..+......
T Consensus       160 ~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell-tg~~pf~~~~~~~~~~~i~~~~~~  234 (343)
T cd07851         160 LDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGKTLFPGSDHIDQLKRIMNLVGT  234 (343)
T ss_pred             cccccccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHhcCC
Confidence            999998754322    223456778999998764 35788999999999999999 799999877665554443221100


Q ss_pred             C-----------------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 W-----------------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ~-----------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                             ......+..+.+++.+||+.+|++|||+.+++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         235 PDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             CCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence            0                             0012357889999999999999999999999865

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.96  E-value=6.6e-29  Score=218.09  Aligned_cols=176  Identities=18%  Similarity=0.139  Sum_probs=126.0

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC-----
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-----   93 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~-----   93 (223)
                      +.+.++.+++|.++|....              ..+++..++.++.||++||.|||++||+||||||.|||++..     
T Consensus        56 ~~~~e~~~~~L~~~l~~~~--------------~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~  121 (793)
T PLN00181         56 VRALECEDVSLRQWLDNPD--------------RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSF  121 (793)
T ss_pred             hhhhccCCccHHHHHhccc--------------ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEE
Confidence            3444466889999997422              359999999999999999999999999999999999999643     


Q ss_pred             --------------CCeEEcCCCCCcccchhh---h------------hhhhcCCcccccccccccccCCCCcccchHHH
Q psy15108         94 --------------LSVKISLSGLSKDTYQKE---Y------------YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY  144 (223)
Q Consensus        94 --------------~~~~l~df~~~~~~~~~~---~------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~sl  144 (223)
                                    +.++++|||+++......   .            .......+++.|+|||.+.+..++.++|||||
T Consensus       122 ~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSl  201 (793)
T PLN00181        122 IESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRL  201 (793)
T ss_pred             eeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhH
Confidence                          445666666665321100   0            00011356788999999988899999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       145 G~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ||++|||+ ++..|+....  .....+..... ++...........++.+||+.+|.+||++.+++++
T Consensus       202 GviL~ELl-~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        202 GVLLFELF-CPVSSREEKS--RTMSSLRHRVL-PPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             HHHHHHHh-hCCCchhhHH--HHHHHHHHhhc-ChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence            99999999 6777664321  12222222211 11111223446788899999999999999999865

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=8.1e-29  Score=207.24  Aligned_cols=183  Identities=17%  Similarity=0.149  Sum_probs=131.0

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++++++ +++|.+++......          .........+..++.|++.||.|||+.|++||||||.||+++.++.++|
T Consensus       240 lv~e~~-~~~l~~~l~~~~~~----------~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL  308 (501)
T PHA03210        240 MITQKY-DFDLYSFMYDEAFD----------WKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVL  308 (501)
T ss_pred             EEEecc-ccCHHHHHhhcccc----------ccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEE
Confidence            445555 57888888653320          0122456778899999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--H-HHHHHHHHhCc
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS--D-DQVLSQLESKK  175 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~--~-~~~~~~~~~~~  175 (223)
                      +|||++...............++..|++||.+.+..++.++|||||||++|+|++.+..|+....  . ....+.+..-.
T Consensus       309 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~  388 (501)
T PHA03210        309 GDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLS  388 (501)
T ss_pred             EeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcc
Confidence            99999975543222222335678999999999988899999999999999999954445554332  1 11111111000


Q ss_pred             ---ccC--------------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ---LCW--------------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ---~~~--------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                         ..+                          ......+..+.+++.+||+.||++||++.|++.+
T Consensus       389 ~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        389 VCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             cChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence               000                          0011345567788999999999999999999876

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.96  E-value=1.3e-28  Score=193.92  Aligned_cols=179  Identities=20%  Similarity=0.237  Sum_probs=138.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+.+ +|.+++....              ..+++..+..++.|++.||.|||+.+++|+||+|.||+++.++.++
T Consensus        92 ~lv~e~~~~-~l~~~l~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~k  156 (302)
T cd07864          92 YLVFEYMDH-DLMGLLESGL--------------VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIK  156 (302)
T ss_pred             EEEEcccCc-cHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEE
Confidence            378888875 7777776432              3589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++................+..|++||.+... .++.++|+||+|+++++++ +|+.||...+..+....+.....
T Consensus       157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~-~g~~~~~~~~~~~~~~~~~~~~~  235 (302)
T cd07864         157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF-TKKPIFQANQELAQLELISRLCG  235 (302)
T ss_pred             eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhC
Confidence            999998875433221112223446779999987643 4688999999999999999 78999987665554444332100


Q ss_pred             cC----------------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CW----------------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~----------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..                            .....++..+.+++..||+.+|.+||++++++.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         236 SPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             CCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            00                            0112467889999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.96  E-value=9.2e-29  Score=193.51  Aligned_cols=158  Identities=15%  Similarity=0.287  Sum_probs=123.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCccccccccccc
Q psy15108         52 RSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAV  130 (223)
Q Consensus        52 ~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~  130 (223)
                      ..+++..+..++.++++|++|||+. +++|+||+|+||+++.++.++++|||++.......  ......++..|++||.+
T Consensus       102 ~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~  179 (288)
T cd06616         102 SVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI--AKTRDAGCRPYMAPERI  179 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC--ccccccCccCccCHHHh
Confidence            4699999999999999999999975 99999999999999999999999999886433221  11223567789999998


Q ss_pred             ccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhCcc-c--CCCCCCChHHHHHHHHHhcCCCCCCC
Q psy15108        131 FDD---EFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKL-C--WKHSSKTPEYITSLHEKCIHPHPHQR  203 (223)
Q Consensus       131 ~~~---~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-~~~~~~~~~~~~-~--~~~~~~~~~~~~~li~~~l~~dp~~R  203 (223)
                      ...   .++.++|+||+|+++|+++ +|..||..... .+....+..... .  ......++.++.+++.+||+.+|.+|
T Consensus       180 ~~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  258 (288)
T cd06616         180 DPSARDGYDVRSDVWSLGITLYEVA-TGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKR  258 (288)
T ss_pred             ccccccCCcchhhhhHHHHHHHHHH-hCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhC
Confidence            765   5788999999999999999 79999976542 122222222111 1  11123478889999999999999999


Q ss_pred             CCHHHHHHH
Q psy15108        204 PTFPSIVTQ  212 (223)
Q Consensus       204 ps~~~ll~~  212 (223)
                      |++++++.+
T Consensus       259 pt~~~i~~~  267 (288)
T cd06616         259 PKYKELLEH  267 (288)
T ss_pred             cCHHHHhcC
Confidence            999999876

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.96  E-value=1.1e-28  Score=197.28  Aligned_cols=178  Identities=20%  Similarity=0.226  Sum_probs=137.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+. ++|.++++..                .+++..+..++.|++.||.|||+.|++|+||+|.||+++.++.+
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~----------------~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~  146 (337)
T cd07852          84 IYLVFEYME-TDLHAVIRAN----------------ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRV  146 (337)
T ss_pred             EEEEecccc-cCHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcE
Confidence            347889987 5999998642                47899999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh----hhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEY----YKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||++........    .......++..|++||.+.+ ..++.++|+||+|+++|+++ +|+.||.+.........+
T Consensus       147 kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~-tg~~pf~~~~~~~~~~~~  225 (337)
T cd07852         147 KLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEML-LGKPLFPGTSTLNQLEKI  225 (337)
T ss_pred             EEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHH-hCCCCCCCCChHHHHHHH
Confidence            9999998875432211    11223356778999998754 44778999999999999999 799999766544332222


Q ss_pred             HhCc-----------------------------ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKK-----------------------------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~-----------------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....                             .........+.++.+++.+||+.+|.+||++.+++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         226 IEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            1110                             0011123467889999999999999999999999976

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.96  E-value=2.1e-28  Score=193.17  Aligned_cols=179  Identities=17%  Similarity=0.230  Sum_probs=135.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+. ++|.+++...+              ..+++..++.++.|+++|+.|||+.|++|+||+|+||+++.++.++
T Consensus        95 ~lv~e~~~-~~l~~~l~~~~--------------~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~k  159 (310)
T cd07865          95 YLVFEFCE-HDLAGLLSNKN--------------VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILK  159 (310)
T ss_pred             EEEEcCCC-cCHHHHHHhcc--------------cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEE
Confidence            47788876 58888886543              2589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhh---hhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         98 ISLSGLSKDTYQKEY---YKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        98 l~df~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      ++|||++........   .......++..|+|||.+.+. .++.++|+||+|+++|+++ +|..||.+.+.......+..
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~-t~~~~~~~~~~~~~~~~~~~  238 (310)
T cd07865         160 LADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMW-TRSPIMQGNTEQHQLTLISQ  238 (310)
T ss_pred             ECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHH
Confidence            999998865432211   111233456779999987654 3678999999999999999 78999987765444333222


Q ss_pred             Cc--ccC---------------CC-------------CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KK--LCW---------------KH-------------SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~--~~~---------------~~-------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      -.  ...               ..             ....+..+.+++.+||..||.+||++++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         239 LCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             HhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            00  000               00             01124567899999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=3.9e-28  Score=184.57  Aligned_cols=178  Identities=20%  Similarity=0.254  Sum_probs=146.2

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ...++++|+.+++|.+++...+               .+++..++.++.++++++.+||+.+++|+||+|.||+++.++.
T Consensus        61 ~~~l~~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~  125 (244)
T smart00220       61 KLYLVMEYCDGGDLFDLLKKRG---------------RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGH  125 (244)
T ss_pred             EEEEEEeCCCCCCHHHHHHhcc---------------CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCc
Confidence            3558899999999999997643               2899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD-LSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~-~~~~~~~~~~~~~  174 (223)
                      ++++|||.+.......  ......+...|++||......++.++|+|++|+++++++ ++..||.. .........+...
T Consensus       126 ~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~-~~~~p~~~~~~~~~~~~~~~~~  202 (244)
T smart00220      126 VKLADFGLARQLDPGG--LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELL-TGKPPFPGDDQLLELFKKIGKP  202 (244)
T ss_pred             EEEccccceeeecccc--ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHhcc
Confidence            9999999987654332  223445667899999998788889999999999999999 78899987 4455555555444


Q ss_pred             cccCCCCCC-ChHHHHHHHHHhcCCCCCCCCCHHHHHH
Q psy15108        175 KLCWKHSSK-TPEYITSLHEKCIHPHPHQRPTFPSIVT  211 (223)
Q Consensus       175 ~~~~~~~~~-~~~~~~~li~~~l~~dp~~Rps~~~ll~  211 (223)
                      ......... ++.++.+++.+||..+|++||++.++++
T Consensus       203 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      203 KPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             CCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            333222222 7889999999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.96  E-value=2e-28  Score=191.87  Aligned_cols=179  Identities=21%  Similarity=0.328  Sum_probs=134.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+. ++|.+++...+.              .+++..+..++.|+++||.|||+.+++|+||+|.||+++.++.+
T Consensus        78 ~~lv~e~~~-~~L~~~~~~~~~--------------~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~  142 (291)
T cd07844          78 LTLVFEYLD-TDLKQYMDDCGG--------------GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGEL  142 (291)
T ss_pred             EEEEEecCC-CCHHHHHHhCCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCE
Confidence            448899998 499999976432              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~-~~~~~~~~~~~  174 (223)
                      +++|||++....... .......++..|+|||.+.+ ..++.++|+||+|+++|+|+ +|..||.... ..+....+...
T Consensus       143 kl~dfg~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~-~g~~~~~~~~~~~~~~~~~~~~  220 (291)
T cd07844         143 KLADFGLARAKSVPS-KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMA-TGRPLFPGSTDVEDQLHKIFRV  220 (291)
T ss_pred             EECccccccccCCCC-ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHH-hCCCCCCCCccHHHHHHHHHHh
Confidence            999999886432111 11122345677999998765 45788999999999999999 7999997654 22222111100


Q ss_pred             c-------------------c--cC-------CCCCCCh--HHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 K-------------------L--CW-------KHSSKTP--EYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~-------------------~--~~-------~~~~~~~--~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                   .  ..       .......  .++.+++.+|++.+|++||++.+++.+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~  288 (291)
T cd07844         221 LGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH  288 (291)
T ss_pred             cCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence            0                   0  00       0001223  678899999999999999999998864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.96  E-value=3.4e-28  Score=194.90  Aligned_cols=176  Identities=18%  Similarity=0.212  Sum_probs=133.1

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec-CCCeE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVK   97 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~-~~~~~   97 (223)
                      +++||+. ++|.+++..                ..+++..++.++.||++|+.|||+.|++|+||+|+||+++. ++.++
T Consensus        93 lv~e~~~-~~L~~~~~~----------------~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~k  155 (342)
T cd07854          93 IVQEYME-TDLANVLEQ----------------GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLK  155 (342)
T ss_pred             EEeeccc-ccHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEE
Confidence            7788886 699988853                25899999999999999999999999999999999999975 45689


Q ss_pred             EcCCCCCcccchhhh--hhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         98 ISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++|||.+........  .......++..|+|||.+.. ..++.++|+|||||++|+++ +|..||......+....+...
T Consensus       156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~-~g~~pf~~~~~~~~~~~~~~~  234 (342)
T cd07854         156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML-TGKPLFAGAHELEQMQLILES  234 (342)
T ss_pred             ECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHh
Confidence            999998865422110  01122345678999998654 45788999999999999999 799999876654433332211


Q ss_pred             c-----------------------ccC-----CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 K-----------------------LCW-----KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~-----------------------~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                       ...     ......+.++.+++.+||+.||.+||++.+++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence            0                       000     0012466788999999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.96  E-value=3.4e-28  Score=194.08  Aligned_cols=176  Identities=18%  Similarity=0.248  Sum_probs=134.3

Q ss_pred             CCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEc
Q psy15108         20 SGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS   99 (223)
Q Consensus        20 v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~   99 (223)
                      ++++ .+++|.+++...               .++++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++++
T Consensus        84 ~~e~-~~~~L~~~l~~~---------------~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~  147 (332)
T cd07857          84 YEEL-MEADLHQIIRSG---------------QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKIC  147 (332)
T ss_pred             EEec-ccCCHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeC
Confidence            3444 457999999754               359999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccchhhhh---hhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108        100 LSGLSKDTYQKEYY---KYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus       100 df~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      |||++.........   ......++..|++||.+.+ ..++.++|+||+|+++++++ +|..||...+.......+....
T Consensus       148 Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~-~g~~pf~~~~~~~~~~~~~~~~  226 (332)
T cd07857         148 DFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELL-GRKPVFKGKDYVDQLNQILQVL  226 (332)
T ss_pred             cCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHH-hCCcCCCCCCHHHHHHHHHHHh
Confidence            99998754322111   1123456788999998755 45788999999999999999 7999997665433332221100


Q ss_pred             ----------------------------cc-CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ----------------------------LC-WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ----------------------------~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                                  .. .......+..+.+++.+|++.+|.+||++++++.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         227 GTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             CCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                                        00 00112356789999999999999999999999765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.96  E-value=2.4e-28  Score=195.29  Aligned_cols=181  Identities=18%  Similarity=0.251  Sum_probs=136.5

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++++|+. ++|.++++.                ..+++..+..++.|+++||.+||+.|++|+||+|+||+++.++.+++
T Consensus        85 lv~e~~~-~~l~~~~~~----------------~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl  147 (336)
T cd07849          85 IVQELME-TDLYKLIKT----------------QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKI  147 (336)
T ss_pred             EEehhcc-cCHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEE
Confidence            6677775 588888853                35899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhh--hhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh--
Q psy15108         99 SLSGLSKDTYQKEYY--KYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES--  173 (223)
Q Consensus        99 ~df~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~--  173 (223)
                      +|||++.........  ......++..|+|||.+.+ ..++.++|+||+|+++++|+ +|+.||.+.+.......+..  
T Consensus       148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~-~G~~~f~~~~~~~~~~~~~~~~  226 (336)
T cd07849         148 CDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEML-SNRPLFPGKDYLHQLNLILGVL  226 (336)
T ss_pred             CcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHc
Confidence            999988654322111  1122456788999998654 45788999999999999999 79999976654332221110  


Q ss_pred             -------------Cc---------ccCC-----CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH--HHHHh
Q psy15108        174 -------------KK---------LCWK-----HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ--LSDAM  217 (223)
Q Consensus       174 -------------~~---------~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~--L~~~~  217 (223)
                                   ..         ....     ..+..+.++.+++.+||+.+|++||++.+++++  +....
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         227 GTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             CCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence                         00         0000     012346778999999999999999999999987  44443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.95  E-value=3.8e-28  Score=194.00  Aligned_cols=177  Identities=18%  Similarity=0.237  Sum_probs=137.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +++||+. |+|.+++....               .+++..+..++.|++.||.|||+.|++|+||+|.||+++.++.+++
T Consensus        97 lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl  160 (335)
T PTZ00024         97 LVMDIMA-SDLKKVVDRKI---------------RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKI  160 (335)
T ss_pred             EEEeccc-cCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEE
Confidence            7788886 79999997543               4899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhh-------------hhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCH
Q psy15108         99 SLSGLSKDTYQKE-------------YYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSD  164 (223)
Q Consensus        99 ~df~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~  164 (223)
                      +|||++.......             ........++..|++||.+.+. .++.++|+||+|+++++++ +|..||...+.
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~-tg~~p~~~~~~  239 (335)
T PTZ00024        161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELL-TGKPLFPGENE  239 (335)
T ss_pred             CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCH
Confidence            9999886543111             0011123446779999998654 3688999999999999999 69999988776


Q ss_pred             HHHHHHHHhCcc---c--C---------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        165 DQVLSQLESKKL---C--W---------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       165 ~~~~~~~~~~~~---~--~---------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+....+.....   .  +                     ......+.++.+++.+||+.+|.+||++++++.+
T Consensus       240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~  313 (335)
T PTZ00024        240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH  313 (335)
T ss_pred             HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence            555443322100   0  0                     0012346788999999999999999999999875

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.95  E-value=6.3e-28  Score=189.36  Aligned_cols=180  Identities=18%  Similarity=0.222  Sum_probs=136.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec-CCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~-~~~   95 (223)
                      ..+|+||+. ++|.+++.....             ..+++..+..++.||+.||.|||+++++|+||+|+||+++. ++.
T Consensus        76 ~~lv~e~~~-~~l~~~~~~~~~-------------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~  141 (294)
T PLN00009         76 LYLVFEYLD-LDLKKHMDSSPD-------------FAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNA  141 (294)
T ss_pred             EEEEEeccc-ccHHHHHHhCCC-------------CCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCE
Confidence            447889985 688888865433             34688999999999999999999999999999999999985 456


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++++|||++....... .......++..|++||.+.+. .++.++|+||+|+++|+++ +|..||......+....+...
T Consensus       142 ~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~-tg~~pf~~~~~~~~~~~~~~~  219 (294)
T PLN00009        142 LKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMV-NQKPLFPGDSEIDELFKIFRI  219 (294)
T ss_pred             EEEcccccccccCCCc-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHH
Confidence            8999999886432211 111223456789999987653 4788999999999999999 799999877655444332210


Q ss_pred             c---------------------ccCC------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 K---------------------LCWK------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~---------------------~~~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                     ..+.      .....++++.+++.+|++.+|++||++.+++++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        220 LGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             hCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0                     0000      113467789999999999999999999999875

>KOG0586|consensus

Probab=99.95  E-value=3.6e-29  Score=202.60  Aligned_cols=176  Identities=15%  Similarity=0.209  Sum_probs=154.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .-+||||+.+|.+++++.+++.               ..+..+..++.|+.+|++|||+++|+|||||+.||+++.+-++
T Consensus       130 lylV~eya~~ge~~~yl~~~gr---------------~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mni  194 (596)
T KOG0586|consen  130 LYLVMEYASGGELFDYLVKHGR---------------MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNI  194 (596)
T ss_pred             eEEEEEeccCchhHHHHHhccc---------------chhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccce
Confidence            3389999999999999998866               7779999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ||+|||++..+....  ......+.+.|.|||...+.+| ...+|+|++|+++|.+. .|.+||.+.+..+..+....++
T Consensus       195 kIaDfgfS~~~~~~~--~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV-~GsLPFDG~~lk~Lr~rvl~gk  271 (596)
T KOG0586|consen  195 KIADFGFSTFFDYGL--MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALV-EGSLPFDGQNLKELRPRVLRGK  271 (596)
T ss_pred             eeeccccceeecccc--cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeee-ecccccCCcccccccchheeee
Confidence            999999998765433  3466788899999999998886 46799999999999999 8999999998877777766665


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ++.+  -..+.++.+++++++..+|.+|++.++++.+
T Consensus       272 ~rIp--~~ms~dce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  272 YRIP--FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             eccc--ceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence            5543  4456778999999999999999999999876

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.95  E-value=1.6e-28  Score=194.51  Aligned_cols=184  Identities=17%  Similarity=0.169  Sum_probs=135.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec----
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS----   92 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~----   92 (223)
                      ..+|+||+. ++|.+++.....          .....+++..++.++.|++.|+.|||+.+++|+||+|+||+++.    
T Consensus        79 ~~lv~e~~~-~~l~~~~~~~~~----------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~  147 (316)
T cd07842          79 VYLLFDYAE-HDLWQIIKFHRQ----------AKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPE  147 (316)
T ss_pred             EEEEEeCCC-cCHHHHHHhhcc----------CCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCc
Confidence            447888886 478888765433          11236899999999999999999999999999999999999999    


Q ss_pred             CCCeEEcCCCCCcccchhhh--hhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH---
Q psy15108         93 DLSVKISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ---  166 (223)
Q Consensus        93 ~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~---  166 (223)
                      ++.++++|||++........  .......++..|+|||.+.+. .++.++|+||+|+++++++ +|..||.+.....   
T Consensus       148 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~-~~~~~~~~~~~~~~~~  226 (316)
T cd07842         148 RGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELL-TLEPIFKGREAKIKKS  226 (316)
T ss_pred             cceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHH-hcCCCCcCCccccccc
Confidence            89999999998875432211  112234567789999987654 4788999999999999999 7899987554321   


Q ss_pred             ------HHHHHHh------------------------CcccCCCC-----------CCChHHHHHHHHHhcCCCCCCCCC
Q psy15108        167 ------VLSQLES------------------------KKLCWKHS-----------SKTPEYITSLHEKCIHPHPHQRPT  205 (223)
Q Consensus       167 ------~~~~~~~------------------------~~~~~~~~-----------~~~~~~~~~li~~~l~~dp~~Rps  205 (223)
                            .+..+..                        .......+           ...+..+.+++.+|++.||++|||
T Consensus       227 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps  306 (316)
T cd07842         227 NPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRIT  306 (316)
T ss_pred             chhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcC
Confidence                  0000000                        00000001           145567889999999999999999


Q ss_pred             HHHHHHH
Q psy15108        206 FPSIVTQ  212 (223)
Q Consensus       206 ~~~ll~~  212 (223)
                      +.+++.+
T Consensus       307 ~~eil~~  313 (316)
T cd07842         307 AEEALEH  313 (316)
T ss_pred             HHHHhcC
Confidence            9999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0666|consensus

Probab=99.95  E-value=1.9e-28  Score=184.53  Aligned_cols=200  Identities=17%  Similarity=0.213  Sum_probs=143.4

Q ss_pred             chHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccC
Q psy15108          2 DLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK   81 (223)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~   81 (223)
                      |++.+.+...+......++++|.+ .+|.+.|+-++.          ++...++...+..+++||+.|+.|||++-++||
T Consensus        88 nvi~Lv~Vfl~~d~~v~l~fdYAE-hDL~~II~fHr~----------~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHR  156 (438)
T KOG0666|consen   88 NVISLVKVFLSHDKKVWLLFDYAE-HDLWHIIKFHRA----------SKAKQLPRSMVKSILWQILDGVHYLHSNWVLHR  156 (438)
T ss_pred             cchhHHHHHhccCceEEEEehhhh-hhHHHHHHHhcc----------chhccCCHHHHHHHHHHHHhhhHHHhhhheeec
Confidence            455566666665333556777765 589999987655          233578999999999999999999999999999


Q ss_pred             CCCCCCeeeecC----CCeEEcCCCCCcccchhh--hhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhC
Q psy15108         82 DIAARNCLISSD----LSVKISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNK  154 (223)
Q Consensus        82 di~~~nil~~~~----~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~  154 (223)
                      |+||.||++..+    |.+|+.|+|+++.+...-  .......+.|++|.|||.+.+.. |+.+.|+|++|||+.||+ +
T Consensus       157 DLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElL-t  235 (438)
T KOG0666|consen  157 DLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELL-T  235 (438)
T ss_pred             cCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHH-c
Confidence            999999999887    889999999998664432  22334567789999999988765 889999999999999998 4


Q ss_pred             CCCCCCCCCHH---------HHHHHHHh---C--cccCCC------------------------------CCCChHHHHH
Q psy15108        155 GEMPFPDLSDD---------QVLSQLES---K--KLCWKH------------------------------SSKTPEYITS  190 (223)
Q Consensus       155 ~~~p~~~~~~~---------~~~~~~~~---~--~~~~~~------------------------------~~~~~~~~~~  190 (223)
                      ...-|.+....         .-+..|..   .  ...|+.                              ...-++...+
T Consensus       236 l~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~  315 (438)
T KOG0666|consen  236 LEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALD  315 (438)
T ss_pred             cCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHH
Confidence            44434222100         00000000   0  000100                              0112344678


Q ss_pred             HHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        191 LHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       191 li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      ++.++|+.||.+|.|+++.+++.
T Consensus       316 LL~klL~yDP~kRIta~qAleh~  338 (438)
T KOG0666|consen  316 LLQKLLTYDPIKRITAEQALEHP  338 (438)
T ss_pred             HHHHHhccCchhhccHHHHhccc
Confidence            99999999999999999999874

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.95  E-value=7.8e-28  Score=188.58  Aligned_cols=178  Identities=19%  Similarity=0.328  Sum_probs=132.5

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+. ++|.+++....              ..+++..+..++.|+++||.|||+.+++|+||+|.||+++.++.++
T Consensus        79 ~lv~e~~~-~~l~~~~~~~~--------------~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~  143 (291)
T cd07870          79 TFVFEYMH-TDLAQYMIQHP--------------GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELK  143 (291)
T ss_pred             EEEEeccc-CCHHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEE
Confidence            37889985 78888776432              2478899999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhC-
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESK-  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~~~~~~-  174 (223)
                      ++|||++....... .......++..|++||.+.+. .++.++|+||+|+++|+++ +|..||...... +.+..+... 
T Consensus       144 l~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~-~g~~~f~~~~~~~~~~~~~~~~~  221 (291)
T cd07870         144 LADFGLARAKSIPS-QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEML-QGQPAFPGVSDVFEQLEKIWTVL  221 (291)
T ss_pred             EeccccccccCCCC-CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCchhHHHHHHHHHHHc
Confidence            99999886432211 111233457789999998654 4788899999999999999 799999765432 211111100 


Q ss_pred             ---------------cccCC--------------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 ---------------KLCWK--------------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ---------------~~~~~--------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                     .....              .....+.++.+++.+|++.||.+|||+++++.+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h  288 (291)
T cd07870         222 GVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH  288 (291)
T ss_pred             CCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence                           00000              001125678899999999999999999998864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.95  E-value=5.8e-28  Score=188.52  Aligned_cols=181  Identities=17%  Similarity=0.258  Sum_probs=138.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+. |+|.+++.....            ...+++..+..++.|+++|+.|||+.|++|+||+|.||+++.++.+
T Consensus        73 ~~lv~e~~~-~~l~~~~~~~~~------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~  139 (284)
T cd07836          73 LMLVFEYMD-KDLKKYMDTHGV------------RGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGEL  139 (284)
T ss_pred             EEEEEecCC-ccHHHHHHhcCC------------CCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcE
Confidence            458899998 489999876432            1358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .......++..|++||.+.+. .++.++|+|++|+++++++ +|..||.+.+..+....+....
T Consensus       140 ~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~-~g~~~~~~~~~~~~~~~~~~~~  217 (284)
T cd07836         140 KLADFGLARAFGIPV-NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMI-TGRPLFPGTNNEDQLLKIFRIM  217 (284)
T ss_pred             EEeecchhhhhcCCc-cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHh
Confidence            999999886432211 111233456779999987654 4688999999999999999 7999998776554433322110


Q ss_pred             ----------------ccCC-----------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ----------------LCWK-----------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ----------------~~~~-----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                      ....           ..+..+..+.+++.+|++.+|.+||++++++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         218 GTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             CCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                            0000           012346778899999999999999999999864

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.95  E-value=3.6e-28  Score=193.63  Aligned_cols=174  Identities=18%  Similarity=0.256  Sum_probs=134.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+ +++|.++++.                .++++..+..++.|+++||.|||+.+++|+||+|.||+++.++.+
T Consensus        85 ~~lv~e~~-~~~L~~~~~~----------------~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~  147 (328)
T cd07856          85 IYFVTELL-GTDLHRLLTS----------------RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDL  147 (328)
T ss_pred             EEEEeehh-ccCHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCE
Confidence            33677876 6789988863                247889999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh--
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES--  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~--  173 (223)
                      +++|||.+......    .....++..|++||.+.+ ..++.++|+||+|+++++++ +|..||...........+..  
T Consensus       148 ~l~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~-tg~~~f~~~~~~~~~~~~~~~~  222 (328)
T cd07856         148 KICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEML-EGKPLFPGKDHVNQFSIITDLL  222 (328)
T ss_pred             EeCccccccccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHh
Confidence            99999988643221    122345677999998765 56788999999999999999 79999977654322111110  


Q ss_pred             ----------------------CcccCC-----CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 ----------------------KKLCWK-----HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ----------------------~~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                            ......     ....++.++.+++.+||+.+|++||++++++.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         223 GTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             CCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                                  000000     113467889999999999999999999999876

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.95  E-value=1.1e-27  Score=189.18  Aligned_cols=178  Identities=22%  Similarity=0.257  Sum_probs=133.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++++|+. ++|.+.+...+              ..+++..+..++.|+++||.|||+.|++|+|++|.||+++.++.+++
T Consensus        92 lv~~~~~-~~l~~~~~~~~--------------~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l  156 (311)
T cd07866          92 MVTPYMD-HDLSGLLENPS--------------VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKI  156 (311)
T ss_pred             EEEecCC-cCHHHHHhccc--------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEE
Confidence            5667765 46777776432              35999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhh----------hhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy15108         99 SLSGLSKDTYQKEYY----------KYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV  167 (223)
Q Consensus        99 ~df~~~~~~~~~~~~----------~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~  167 (223)
                      +|||++.........          ......++..|+|||.+.+. .++.++|+||+|+++|+|+ +|..||.+.+....
T Consensus       157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~-~g~~~~~~~~~~~~  235 (311)
T cd07866         157 ADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMF-TRRPILQGKSDIDQ  235 (311)
T ss_pred             CcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHH-hCCCCCCCCCHHHH
Confidence            999988754322110          01122446779999987654 4788999999999999999 79999987766554


Q ss_pred             HHHHHhCccc-----C----------------C-------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        168 LSQLESKKLC-----W----------------K-------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       168 ~~~~~~~~~~-----~----------------~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+......     +                .       ......+.+.+++.+|++.+|.+||++.+++.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         236 LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             HHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence            4433221000     0                0       002234678899999999999999999998864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.95  E-value=1.3e-27  Score=191.57  Aligned_cols=172  Identities=19%  Similarity=0.257  Sum_probs=132.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++++|+. ++|.+++.                 ..++++.+..++.|++.|+.|||+.+++||||+|+||+++.++.++
T Consensus        96 ~lv~e~~~-~~l~~~~~-----------------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~k  157 (342)
T cd07879          96 YLVMPYMQ-TDLQKIMG-----------------HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELK  157 (342)
T ss_pred             EEEecccc-cCHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence            36667665 46766552                 2589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc-
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK-  175 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~-  175 (223)
                      ++|||++......    .....++..|+|||.+.+ ..++.++|+||+|+++|+|+ +|+.||.+.+.......+.... 
T Consensus       158 L~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~-~g~~pf~~~~~~~~~~~~~~~~~  232 (342)
T cd07879         158 ILDFGLARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEML-TGKTLFKGKDYLDQLTQILKVTG  232 (342)
T ss_pred             EeeCCCCcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHhcC
Confidence            9999998653221    122345677999999865 45788999999999999999 7999998776544433322210 


Q ss_pred             ----------------------ccCC------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ----------------------LCWK------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ----------------------~~~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                            ...+      ..+..+..+.+++.+||+.||.+||++++++.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h  297 (342)
T cd07879         233 VPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH  297 (342)
T ss_pred             CCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                                  0000      012456778999999999999999999999866

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.95  E-value=1.7e-27  Score=190.83  Aligned_cols=173  Identities=17%  Similarity=0.236  Sum_probs=135.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|++|+ +++|.++++.                ..+++..++.++.|+++|+.|||+.|++|+||+|.||+++.++.++
T Consensus        96 ~lv~e~~-~~~l~~~~~~----------------~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~k  158 (343)
T cd07880          96 YLVMPFM-GTDLGKLMKH----------------EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELK  158 (343)
T ss_pred             EEEEecC-CCCHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence            3677777 7899988863                2489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++......    .....++..|++||.+.. ..++.++|+||+|+++++++ +|..||...+.......+.....
T Consensus       159 l~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~-~g~~pf~~~~~~~~~~~~~~~~~  233 (343)
T cd07880         159 ILDFGLARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEML-TGKPLFKGHDHLDQLMEIMKVTG  233 (343)
T ss_pred             EeecccccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHhcC
Confidence            9999998754322    122345678999998765 34788999999999999999 79999987665433333221100


Q ss_pred             c-----------------------------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 C-----------------------------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~-----------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                             .......+..+.+++.+|++.||++||++.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~  298 (343)
T cd07880         234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH  298 (343)
T ss_pred             CCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0                             00113467778999999999999999999999854

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG4250|consensus

Probab=99.95  E-value=9.3e-28  Score=197.22  Aligned_cols=189  Identities=14%  Similarity=0.269  Sum_probs=146.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC--CC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD--LS   95 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~--~~   95 (223)
                      -++||||.+|||+..|.+            +.+..++++.+++.++..+..|+.|||++||+||||||.||++-..  |.
T Consensus        93 vlvmEyC~gGsL~~~L~~------------PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq  160 (732)
T KOG4250|consen   93 VLVMEYCSGGSLRKVLNS------------PENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQ  160 (732)
T ss_pred             eEEEeecCCCcHHHHhcC------------cccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCc
Confidence            388999999999999973            2234579999999999999999999999999999999999987433  33


Q ss_pred             --eEEcCCCCCcccchhhhhhhhcCCcccccccccccc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH----HHH
Q psy15108         96 --VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD----QVL  168 (223)
Q Consensus        96 --~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~----~~~  168 (223)
                        .|++|||.|+......  .....+||..|++||... +..|+..+|.|||||++|+++ +|..||......    ++.
T Consensus       161 ~IyKLtDfG~Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~ca-TG~lPF~p~~~pk~~~~~~  237 (732)
T KOG4250|consen  161 SIYKLTDFGAARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECA-TGELPFIPFGGPKNNKEIM  237 (732)
T ss_pred             eEEeeecccccccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHh-ccCCCCCcCCCccccchhh
Confidence              5999999999776665  556789999999999988 478999999999999999999 899999644332    222


Q ss_pred             HHHHhC---------------ccc----CCCCCCCh----HHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHhhhcc
Q psy15108        169 SQLESK---------------KLC----WKHSSKTP----EYITSLHEKCIHPHPHQRP--TFPSIVTQLSDAMCNDV  221 (223)
Q Consensus       169 ~~~~~~---------------~~~----~~~~~~~~----~~~~~li~~~l~~dp~~Rp--s~~~ll~~L~~~~~~~~  221 (223)
                      ..+..+               +..    ++.+...+    ..+-..+..++..+|++|.  .+.+....+..++...|
T Consensus       238 ~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~v  315 (732)
T KOG4250|consen  238 WHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKV  315 (732)
T ss_pred             hhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhhe
Confidence            222211               111    12222222    2345677788999999999  88999888888876654

>KOG2052|consensus

Probab=99.95  E-value=3.1e-27  Score=185.07  Aligned_cols=183  Identities=20%  Similarity=0.294  Sum_probs=144.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc--------CCcccCCCCCCCeee
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD--------KRLIHKDIAARNCLI   90 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--------~~i~H~di~~~nil~   90 (223)
                      +|.+|++.|||+|||..+                +++.+..++++..+++||++||.        -.|+|||||+.||++
T Consensus       286 LvTdYHe~GSL~DyL~r~----------------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV  349 (513)
T KOG2052|consen  286 LVTDYHEHGSLYDYLNRN----------------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV  349 (513)
T ss_pred             EeeecccCCcHHHHHhhc----------------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE
Confidence            889999999999999863                69999999999999999999994        369999999999999


Q ss_pred             ecCCCeEEcCCCCCcccchhh---hhhhhcCCcccccccccccccCCC------CcccchHHHHHHHHHHHhCC------
Q psy15108         91 SSDLSVKISLSGLSKDTYQKE---YYKYRNAILPLRWLPYEAVFDDEF------STKSDVYAYACLIWEIFNKG------  155 (223)
Q Consensus        91 ~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~~------~~~~Di~slG~il~~l~~~~------  155 (223)
                      +.++.+.|.|+|++.......   ....+..+||..|+|||++.....      -..+||||||.++||++ .+      
T Consensus       350 Kkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEia-rRc~~ggi  428 (513)
T KOG2052|consen  350 KKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIA-RRCESGGI  428 (513)
T ss_pred             ccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHH-HHhhcCCE
Confidence            999999999999998765442   234678899999999999864431      23599999999999986 22      


Q ss_pred             ----CCCCCCC-----CHHHHHHHHHhCcccCCCCCCC-----hHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        156 ----EMPFPDL-----SDDQVLSQLESKKLCWKHSSKT-----PEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       156 ----~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                          +.||.+.     +..++.+-+...+.++..+...     -..+.++|+.||..+|.-|-|+-.+.+.|.++.+
T Consensus       429 ~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  429 VEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             ehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence                5677543     2233333344444555444322     2456789999999999999999999999988764

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.95  E-value=2.4e-27  Score=190.18  Aligned_cols=171  Identities=19%  Similarity=0.264  Sum_probs=133.5

Q ss_pred             CCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcC
Q psy15108         21 GKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL  100 (223)
Q Consensus        21 ~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~d  100 (223)
                      .+++.+++|.++++.                ..+++..+..++.|+++|+.|||+.|++|+||+|+||+++.++.++++|
T Consensus       100 v~~~~~~~L~~~~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~d  163 (345)
T cd07877         100 VTHLMGADLNNIVKC----------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD  163 (345)
T ss_pred             EehhcccCHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEec
Confidence            344568999988863                2489999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc---
Q psy15108        101 SGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL---  176 (223)
Q Consensus       101 f~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~---  176 (223)
                      ||++......    .....++..|++||.+.+ ..++.++|+||+||++++++ +|..||...+.......+.....   
T Consensus       164 fg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~-~g~~pf~~~~~~~~~~~~~~~~~~~~  238 (345)
T cd07877         164 FGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG  238 (345)
T ss_pred             cccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            9988654221    123456778999998765 45788999999999999999 79999977665443333211000   


Q ss_pred             --------------------c-CC-----CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 --------------------C-WK-----HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 --------------------~-~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                          . ..     .....+.++.+++..|++.||.+||++.+++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         239 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence                                0 00     011356778999999999999999999999876

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0671|consensus

Probab=99.95  E-value=1.9e-28  Score=188.58  Aligned_cols=173  Identities=17%  Similarity=0.277  Sum_probs=135.9

Q ss_pred             CCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec----------
Q psy15108         23 PRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS----------   92 (223)
Q Consensus        23 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~----------   92 (223)
                      ...|-|++++|+.++.             .+++...+..+++|+++++++||+.+++|-|+||+||++..          
T Consensus       171 ellG~S~~dFlk~N~y-------------~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k  237 (415)
T KOG0671|consen  171 ELLGLSTFDFLKENNY-------------IPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPK  237 (415)
T ss_pred             eccChhHHHHhccCCc-------------cccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccC
Confidence            3456699999998877             68999999999999999999999999999999999999842          


Q ss_pred             ----------CCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Q psy15108         93 ----------DLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL  162 (223)
Q Consensus        93 ----------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~  162 (223)
                                +..++++|||-+......    ....+.|..|.|||++.+..++.+.||||+|||+.|++ +|..-|+..
T Consensus       238 ~~~~~~r~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Ely-tG~~LFqtH  312 (415)
T KOG0671|consen  238 KKVCFIRPLKSTAIKVIDFGSATFDHEH----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELY-TGETLFQTH  312 (415)
T ss_pred             CccceeccCCCcceEEEecCCcceeccC----cceeeeccccCCchheeccCcCCccCceeeeeEEEEee-ccceecccC
Confidence                      234789999988643222    25678899999999999999999999999999999999 788888777


Q ss_pred             CHHH---HHHHHHhC------------------cccCCC-------------C----------CCChHHHHHHHHHhcCC
Q psy15108        163 SDDQ---VLSQLESK------------------KLCWKH-------------S----------SKTPEYITSLHEKCIHP  198 (223)
Q Consensus       163 ~~~~---~~~~~~~~------------------~~~~~~-------------~----------~~~~~~~~~li~~~l~~  198 (223)
                      ++.+   +++.+...                  ...|+.             +          .....++.+|+++||.+
T Consensus       313 en~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f  392 (415)
T KOG0671|consen  313 ENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF  392 (415)
T ss_pred             CcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc
Confidence            6544   33322211                  111110             0          11124578899999999


Q ss_pred             CCCCCCCHHHHHHHH
Q psy15108        199 HPHQRPTFPSIVTQL  213 (223)
Q Consensus       199 dp~~Rps~~~ll~~L  213 (223)
                      ||.+|+|++|++.|=
T Consensus       393 DP~~RiTl~EAL~Hp  407 (415)
T KOG0671|consen  393 DPARRITLREALSHP  407 (415)
T ss_pred             CccccccHHHHhcCH
Confidence            999999999999873

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.95  E-value=1.8e-27  Score=200.70  Aligned_cols=194  Identities=13%  Similarity=0.071  Sum_probs=127.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhcccc-----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKD-----KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS   91 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~   91 (223)
                      ..+|++|+.+++|.++++........     ......+.........+..++.|++.||.|||+++|+||||||+|||++
T Consensus       210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~  289 (566)
T PLN03225        210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS  289 (566)
T ss_pred             eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEe
Confidence            55889999999999999864321000     0000111122234556778999999999999999999999999999998


Q ss_pred             c-CCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCC----------------------CCcccchHHHHHHH
Q psy15108         92 S-DLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE----------------------FSTKSDVYAYACLI  148 (223)
Q Consensus        92 ~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~----------------------~~~~~Di~slG~il  148 (223)
                      . ++.+|++|||++...............+++.|++||.+....                      +..++||||+||++
T Consensus       290 ~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL  369 (566)
T PLN03225        290 EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIF  369 (566)
T ss_pred             CCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHH
Confidence            6 578999999999754322211223456678899999653221                      23456999999999


Q ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhCcc---------cCCC----------CCCChHHHHHHHHHhcCCCCCCCCCHHHH
Q psy15108        149 WEIFNKGEMPFPDLSDDQVLSQLESKKL---------CWKH----------SSKTPEYITSLHEKCIHPHPHQRPTFPSI  209 (223)
Q Consensus       149 ~~l~~~~~~p~~~~~~~~~~~~~~~~~~---------~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~~l  209 (223)
                      |+|+ ++..++... .......+.....         ....          .........+|+.+|++.||++|||++++
T Consensus       370 ~el~-~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~  447 (566)
T PLN03225        370 LQMA-FPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAA  447 (566)
T ss_pred             HHHH-hCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHH
Confidence            9999 565554321 1111111111100         0000          01112334589999999999999999999


Q ss_pred             HHH
Q psy15108        210 VTQ  212 (223)
Q Consensus       210 l~~  212 (223)
                      ++|
T Consensus       448 L~H  450 (566)
T PLN03225        448 LAH  450 (566)
T ss_pred             hCC
Confidence            986

>KOG0587|consensus

Probab=99.94  E-value=1.4e-27  Score=199.85  Aligned_cols=179  Identities=18%  Similarity=0.265  Sum_probs=155.1

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|||||.+||.-|+++....             ..+.|+.+.-|+++++.|+.+||.+.++|||||..||+++.++.+|+
T Consensus        98 LVMEfC~gGSVTDLVKn~~g-------------~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKL  164 (953)
T KOG0587|consen   98 LVMEFCGGGSVTDLVKNTKG-------------NRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKL  164 (953)
T ss_pred             EEeeccCCccHHHHHhhhcc-------------cchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEE
Confidence            99999999999999998765             67999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCccccccccccccc-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-----DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +|||.+....+.. ...++..+++.|+|||++.-     ..|+..+|+||||++..||. -|.+|+.++.+...+-.+-.
T Consensus       165 vDFGvSaQldsT~-grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEla-dG~PPl~DmHPmraLF~IpR  242 (953)
T KOG0587|consen  165 VDFGVSAQLDSTV-GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMA-EGAPPLCDMHPMRALFLIPR  242 (953)
T ss_pred             eeeeeeeeeeccc-ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhc-CCCCCccCcchhhhhccCCC
Confidence            9999988665433 23577899999999999752     23678899999999999998 89999999988777666544


Q ss_pred             Cc-ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KK-LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+ +.+..+.+.++++.++|..||..|..+||+..++++|
T Consensus       243 NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  243 NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence            42 2334466788999999999999999999999998865

>KOG0607|consensus

Probab=99.94  E-value=9.1e-27  Score=176.09  Aligned_cols=193  Identities=14%  Similarity=0.206  Sum_probs=151.0

Q ss_pred             chHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccC
Q psy15108          2 DLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK   81 (223)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~   81 (223)
                      |++++|....++ ..+-+|||-+.||.|...|++++.               |++..+.++..+|+.||.+||.+||+||
T Consensus       137 nilqLiefFEdd-~~FYLVfEKm~GGplLshI~~~~~---------------F~E~EAs~vvkdia~aLdFlH~kgIAHR  200 (463)
T KOG0607|consen  137 NILQLIEFFEDD-TRFYLVFEKMRGGPLLSHIQKRKH---------------FNEREASRVVKDIASALDFLHTKGIAHR  200 (463)
T ss_pred             cHHHHHHHhccc-ceEEEEEecccCchHHHHHHHhhh---------------ccHHHHHHHHHHHHHHHHHHhhcCcccc
Confidence            456666554433 334589999999999999998866               9999999999999999999999999999


Q ss_pred             CCCCCCeeeecCC---CeEEcCCCCCcccchhh------hhhhhcCCcccccccccccc-----cCCCCcccchHHHHHH
Q psy15108         82 DIAARNCLISSDL---SVKISLSGLSKDTYQKE------YYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACL  147 (223)
Q Consensus        82 di~~~nil~~~~~---~~~l~df~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~Di~slG~i  147 (223)
                      |+||+|||-....   .+|++||.+.....-+.      --...+..|...|||||++.     ...|+.+.|.||||++
T Consensus       201 DlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvI  280 (463)
T KOG0607|consen  201 DLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVI  280 (463)
T ss_pred             cCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHH
Confidence            9999999976554   37999998764321111      00123456778899999864     2347889999999999


Q ss_pred             HHHHHhCCCCCCCCCC---------------HHHHHHHHHhCcccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHH
Q psy15108        148 IWEIFNKGEMPFPDLS---------------DDQVLSQLESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIV  210 (223)
Q Consensus       148 l~~l~~~~~~p~~~~~---------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll  210 (223)
                      +|-|+ .|..||.+.=               +....+.|..+.+.++..  ..++.+.++++..++..|+.+|-++.+++
T Consensus       281 lYImL-sGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vl  359 (463)
T KOG0607|consen  281 LYIML-SGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVL  359 (463)
T ss_pred             HHHHH-hCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhcc
Confidence            99999 8999995441               234566777777666543  35688999999999999999999998887


Q ss_pred             H
Q psy15108        211 T  211 (223)
Q Consensus       211 ~  211 (223)
                      +
T Consensus       360 n  360 (463)
T KOG0607|consen  360 N  360 (463)
T ss_pred             C
Confidence            6

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.94  E-value=9.9e-27  Score=208.76  Aligned_cols=178  Identities=14%  Similarity=0.165  Sum_probs=133.8

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCCCCCeeeec
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS---DKRLIHKDIAARNCLISS   92 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~~~nil~~~   92 (223)
                      ...+||||+++|+|.++++                  .+++..+..++.|+++|+.|||   +.+++|||+||.||+++.
T Consensus       757 ~~~lv~Ey~~~g~L~~~l~------------------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~  818 (968)
T PLN00113        757 GAYLIHEYIEGKNLSEVLR------------------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG  818 (968)
T ss_pred             CCEEEEeCCCCCcHHHHHh------------------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC
Confidence            3558999999999999995                  2789999999999999999999   669999999999999998


Q ss_pred             CCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-----HHH
Q psy15108         93 DLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-----DQV  167 (223)
Q Consensus        93 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-----~~~  167 (223)
                      +...++. ++......     ......++..|+|||.+.+..++.++|||||||++||++ +|+.||.....     .+.
T Consensus       819 ~~~~~~~-~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~-tg~~p~~~~~~~~~~~~~~  891 (968)
T PLN00113        819 KDEPHLR-LSLPGLLC-----TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELL-TGKSPADAEFGVHGSIVEW  891 (968)
T ss_pred             CCceEEE-eccccccc-----cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHH-hCCCCCCcccCCCCcHHHH
Confidence            8777664 44432211     112235678899999998888999999999999999999 79999853211     111


Q ss_pred             HHHHHh---------CcccC--CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        168 LSQLES---------KKLCW--KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       168 ~~~~~~---------~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      ......         .....  ........++.+++.+||+.+|++||+++++++.|+++..
T Consensus       892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        892 ARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            111000         00000  0011223457789999999999999999999999998865

>KOG0668|consensus

Probab=99.94  E-value=1.7e-26  Score=167.39  Aligned_cols=189  Identities=15%  Similarity=0.228  Sum_probs=141.7

Q ss_pred             hHHHHHHhhc-CCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccC
Q psy15108          3 LKQFLLATRK-DSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK   81 (223)
Q Consensus         3 ~~~~~~~~~~-~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~   81 (223)
                      +..+++.-.+ .+....+++||..+.+...+-.                  +++.-++..++.|+++||.|+|++||.||
T Consensus        95 Ii~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~------------------tl~d~dIryY~~elLkALdyCHS~GImHR  156 (338)
T KOG0668|consen   95 IIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP------------------TLTDYDIRYYIYELLKALDYCHSMGIMHR  156 (338)
T ss_pred             eeehhhhhcCccccCchhHhhhhccccHHHHhh------------------hhchhhHHHHHHHHHHHHhHHHhcCcccc
Confidence            4455555455 5555779999999999888874                  58999999999999999999999999999


Q ss_pred             CCCCCCeeeecC-CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCC
Q psy15108         82 DIAARNCLISSD-LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPF  159 (223)
Q Consensus        82 di~~~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~  159 (223)
                      |+||.|++++.. ..++++|+|++...-...  ..+..+....|..||.+... .|+.+-|+|||||++..|+ ..+.||
T Consensus       157 DVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~--eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~mi-FrkepF  233 (338)
T KOG0668|consen  157 DVKPHNVMIDHELRKLRLIDWGLAEFYHPGK--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPF  233 (338)
T ss_pred             cCCcceeeechhhceeeeeecchHhhcCCCc--eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHH-hccCcc
Confidence            999999999866 458999999996543222  34455666778899998754 4889999999999999999 566665


Q ss_pred             -CCCCHHHHHHHHHh-----------------------------CcccCC------CCCCChHHHHHHHHHhcCCCCCCC
Q psy15108        160 -PDLSDDQVLSQLES-----------------------------KKLCWK------HSSKTPEYITSLHEKCIHPHPHQR  203 (223)
Q Consensus       160 -~~~~~~~~~~~~~~-----------------------------~~~~~~------~~~~~~~~~~~li~~~l~~dp~~R  203 (223)
                       .+.++...+-.+..                             ...+|.      ...-.+++..+++.++|..|.++|
T Consensus       234 FhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeR  313 (338)
T KOG0668|consen  234 FHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQER  313 (338)
T ss_pred             cCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccc
Confidence             44443222111111                             000111      112235889999999999999999


Q ss_pred             CCHHHHHHH
Q psy15108        204 PTFPSIVTQ  212 (223)
Q Consensus       204 ps~~~ll~~  212 (223)
                      +|++|.+.|
T Consensus       314 lTakEam~H  322 (338)
T KOG0668|consen  314 LTAKEAMAH  322 (338)
T ss_pred             cchHHHhcC
Confidence            999999876

>KOG3653|consensus

Probab=99.94  E-value=6.9e-26  Score=178.71  Aligned_cols=201  Identities=21%  Similarity=0.299  Sum_probs=151.2

Q ss_pred             chHHHHHHhhcCCC---CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc---
Q psy15108          2 DLKQFLLATRKDSK---DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD---   75 (223)
Q Consensus         2 ~~~~~~~~~~~~~~---~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---   75 (223)
                      |+++|+.+-+....   .+-+|++|+++|+|.+||+.+                .+++....+++..+++||+|||+   
T Consensus       265 nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n----------------tisw~~~cria~SmarGLa~LHee~p  328 (534)
T KOG3653|consen  265 NILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN----------------TISWNSLCRIAESMARGLAHLHEELP  328 (534)
T ss_pred             hHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc----------------cccHHHHHHHHHHHHHHHHHhcccCC
Confidence            56777776655332   255999999999999999874                68999999999999999999995   


Q ss_pred             ------CCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCC-CC-----cccchH
Q psy15108         76 ------KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDE-FS-----TKSDVY  142 (223)
Q Consensus        76 ------~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~-~~-----~~~Di~  142 (223)
                            .+|+|||||++|||+..++++.|+|||++........ ...-..+||..|||||++.+.. +.     .+.|||
T Consensus       329 ~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvY  408 (534)
T KOG3653|consen  329 RGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVY  408 (534)
T ss_pred             cCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHH
Confidence                  3799999999999999999999999999987654321 1122378999999999986543 22     369999


Q ss_pred             HHHHHHHHHHhCCC-----------CCCC-----CCCHHHHHHHHHhCcccCCCCC-----CChHHHHHHHHHhcCCCCC
Q psy15108        143 AYACLIWEIFNKGE-----------MPFP-----DLSDDQVLSQLESKKLCWKHSS-----KTPEYITSLHEKCIHPHPH  201 (223)
Q Consensus       143 slG~il~~l~~~~~-----------~p~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~l~~dp~  201 (223)
                      |+|.++||+++...           .||.     ...-.++...+...+.++..+.     .....+++.+..||..|++
T Consensus       409 amgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDae  488 (534)
T KOG3653|consen  409 AMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAE  488 (534)
T ss_pred             HHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchh
Confidence            99999999973321           2222     1112233334444444444332     2356688999999999999


Q ss_pred             CCCCHHHHHHHHHHHhh
Q psy15108        202 QRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       202 ~Rps~~~ll~~L~~~~~  218 (223)
                      -|.|+.-+-+.+.++..
T Consensus       489 ARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  489 ARLTAGCVEERMAELMM  505 (534)
T ss_pred             hhhhhHHHHHHHHHHhc
Confidence            99999999888887653

>KOG1151|consensus

Probab=99.94  E-value=6.4e-27  Score=183.98  Aligned_cols=183  Identities=19%  Similarity=0.283  Sum_probs=143.8

Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC--CcccCCCCCCCeee
Q psy15108         13 DSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK--RLIHKDIAARNCLI   90 (223)
Q Consensus        13 ~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--~i~H~di~~~nil~   90 (223)
                      +.+.+-.|.|||+|-+|.=||++++-               +++..+..|+.||+.||.||...  .|+|-|+||.|||+
T Consensus       539 DtdsFCTVLEYceGNDLDFYLKQhkl---------------mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILL  603 (775)
T KOG1151|consen  539 DTDSFCTVLEYCEGNDLDFYLKQHKL---------------MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILL  603 (775)
T ss_pred             ccccceeeeeecCCCchhHHHHhhhh---------------hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEE
Confidence            33444578999999999999998865               99999999999999999999864  79999999999998


Q ss_pred             ecC---CCeEEcCCCCCcccchhhhh------hhhcCCcccccccccccccC----CCCcccchHHHHHHHHHHHhCCCC
Q psy15108         91 SSD---LSVKISLSGLSKDTYQKEYY------KYRNAILPLRWLPYEAVFDD----EFSTKSDVYAYACLIWEIFNKGEM  157 (223)
Q Consensus        91 ~~~---~~~~l~df~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~----~~~~~~Di~slG~il~~l~~~~~~  157 (223)
                      ...   |.+|++|||+++......+.      ......||.+|++||++.-.    +.+.++||||+|||+|.++ +|+.
T Consensus       604 v~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQCl-YGrK  682 (775)
T KOG1151|consen  604 VNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCL-YGRK  682 (775)
T ss_pred             ecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhh-ccCC
Confidence            644   66899999999865443221      23346789999999997633    3688999999999999999 8999


Q ss_pred             CCCCCC-HHHHHHH---HHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHH
Q psy15108        158 PFPDLS-DDQVLSQ---LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVT  211 (223)
Q Consensus       158 p~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  211 (223)
                      ||-..- ...+++.   +......++.-+..+.+.+.+|++||++.-++|.++.++..
T Consensus       683 PFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  683 PFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             CCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            996543 3333322   23333444445567888999999999999999988877643

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.93  E-value=6.7e-26  Score=195.27  Aligned_cols=93  Identities=17%  Similarity=0.291  Sum_probs=78.1

Q ss_pred             cccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCC-CCCChHHHHHHHHHhcCC
Q psy15108        120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH-SSKTPEYITSLHEKCIHP  198 (223)
Q Consensus       120 ~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~  198 (223)
                      +++.|++||++.+..++.++|||||||++|||+ +|..||.+.........+......++. ...++..+.+++..||..
T Consensus       542 GT~~Y~APE~l~~~~~~~~~DiwSlG~il~Ell-tG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~  620 (669)
T cd05610         542 GTPDYLAPELLLGKPHGPAVDWWALGVCLFEFL-TGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTM  620 (669)
T ss_pred             eCccccCHHHcCCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHccc
Confidence            467899999998888999999999999999999 799999988887777776554443332 235678899999999999


Q ss_pred             CCCCCCCHHHHHHHH
Q psy15108        199 HPHQRPTFPSIVTQL  213 (223)
Q Consensus       199 dp~~Rps~~~ll~~L  213 (223)
                      ||.+||++.++++|-
T Consensus       621 dP~~R~ta~e~l~h~  635 (669)
T cd05610         621 DPTKRAGLKELKQHP  635 (669)
T ss_pred             ChhHCcCHHHHHhCH
Confidence            999999999999873

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0664|consensus

Probab=99.93  E-value=2.2e-26  Score=170.98  Aligned_cols=163  Identities=17%  Similarity=0.309  Sum_probs=128.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccc
Q psy15108         50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEA  129 (223)
Q Consensus        50 ~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~  129 (223)
                      ++..++.+.+.-+++||++||+|||+.+|+||||||.|.+++.+..+|++|||+++.............+.+..|.+||.
T Consensus       149 SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEi  228 (449)
T KOG0664|consen  149 SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPEL  228 (449)
T ss_pred             cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHH
Confidence            44579999999999999999999999999999999999999999999999999999876665555555667888999999


Q ss_pred             cccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-----------------------CcccCCC-----
Q psy15108        130 VFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES-----------------------KKLCWKH-----  180 (223)
Q Consensus       130 ~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~-----------------------~~~~~~~-----  180 (223)
                      +.+. .|+...||||+|||+.|++ .++.-|...++.+.++.+..                       +..+.+.     
T Consensus       229 LMGaRhYs~AvDiWSVGCIFaELL-gRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLY  307 (449)
T KOG0664|consen  229 LMGARRYTGAVDIWSVGCIFAELL-QRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLY  307 (449)
T ss_pred             hhcchhhcCccceehhhHHHHHHH-hhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCcccee
Confidence            8765 5899999999999999999 78888876665544333221                       1111110     


Q ss_pred             ----CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        181 ----SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       181 ----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                          +..-..+...+..+++.+||.+|.+..+.+.++
T Consensus       308 tlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  308 KIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             eecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence                011234566788899999999999999888764

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.93  E-value=4e-25  Score=182.87  Aligned_cols=195  Identities=17%  Similarity=0.139  Sum_probs=134.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhcccc------CCCC---CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKD------KSGS---GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN   87 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~------~~~~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~n   87 (223)
                      .-+|+||+.+|+|.++|+........      ..+.   .......+++..+..++.|+++||.|||+.+++||||||.|
T Consensus       260 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~N  339 (507)
T PLN03224        260 QWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPEN  339 (507)
T ss_pred             eEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHh
Confidence            34899999999999999864321110      0000   00112346788999999999999999999999999999999


Q ss_pred             eeeecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCC--------------------C--CcccchHHHH
Q psy15108         88 CLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE--------------------F--STKSDVYAYA  145 (223)
Q Consensus        88 il~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--------------------~--~~~~Di~slG  145 (223)
                      |+++.++.++++|||++................++.|++||.+....                    +  ....|+||+|
T Consensus       340 ILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlG  419 (507)
T PLN03224        340 LLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAG  419 (507)
T ss_pred             EEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHH
Confidence            99999999999999998654322111111233467899999875322                    1  1246999999


Q ss_pred             HHHHHHHhCCC-CCCCCCCHH-----------HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCC---CCCCCHHHHH
Q psy15108        146 CLIWEIFNKGE-MPFPDLSDD-----------QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHP---HQRPTFPSIV  210 (223)
Q Consensus       146 ~il~~l~~~~~-~p~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp---~~Rps~~~ll  210 (223)
                      |++++|+ .+. .|+.+....           ..+................++..++++.+|+..+|   .+|+|++|++
T Consensus       420 vil~em~-~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL  498 (507)
T PLN03224        420 VLLMQMC-VPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQAL  498 (507)
T ss_pred             HHHHHHH-hCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHh
Confidence            9999999 554 366532211           11111122223333345567889999999999766   6899999999


Q ss_pred             HH
Q psy15108        211 TQ  212 (223)
Q Consensus       211 ~~  212 (223)
                      +|
T Consensus       499 ~H  500 (507)
T PLN03224        499 SH  500 (507)
T ss_pred             CC
Confidence            76

>KOG0665|consensus

Probab=99.93  E-value=1.1e-25  Score=169.99  Aligned_cols=173  Identities=17%  Similarity=0.306  Sum_probs=133.7

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|||+ ..+||-+.+.-                 .++-..+..+++|++.|++|||+.||+|||+||+||++..+...|+
T Consensus        98 ~v~e~-m~~nl~~vi~~-----------------elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi  159 (369)
T KOG0665|consen   98 LVMEL-MDANLCQVILM-----------------ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKI  159 (369)
T ss_pred             HHHHh-hhhHHHHHHHH-----------------hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheee
Confidence            34444 45677777762                 3788999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-----
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES-----  173 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~-----  173 (223)
                      .|||+++.....  ......+.+..|.|||++.+..+...+||||+||++.||+ .|..-|.+.+...-+.++..     
T Consensus       160 ~dfg~ar~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli-~~~Vlf~g~d~idQ~~ki~~~lgtp  236 (369)
T KOG0665|consen  160 LDFGLARTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELI-LGTVLFPGKDHIDQWNKIIEQLGTP  236 (369)
T ss_pred             ccchhhcccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHh-hceEEecCchHHHHHHHHHHHhcCC
Confidence            999999865444  2345567788899999999999999999999999999999 78877776553322111111     


Q ss_pred             -----------------Ccc------------------cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 -----------------KKL------------------CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 -----------------~~~------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                       ...                  ..+.++.....+++++.+||..+|++|.+++++++|
T Consensus       237 d~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  237 DPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             CHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence                             000                  000111223557889999999999999999999876

>KOG0695|consensus

Probab=99.93  E-value=1.4e-25  Score=171.07  Aligned_cols=174  Identities=17%  Similarity=0.254  Sum_probs=140.6

Q ss_pred             cCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee
Q psy15108         12 KDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS   91 (223)
Q Consensus        12 ~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~   91 (223)
                      +......+|.||.+||+|-=.+++.+               +++++.+..+..+|+-||.|||++||++||+|..|++++
T Consensus       321 qtesrlffvieyv~ggdlmfhmqrqr---------------klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlld  385 (593)
T KOG0695|consen  321 QTESRLFFVIEYVNGGDLMFHMQRQR---------------KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLD  385 (593)
T ss_pred             cccceEEEEEEEecCcceeeehhhhh---------------cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEc
Confidence            34444558899999999988887664               499999999999999999999999999999999999999


Q ss_pred             cCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCC-------CCCH
Q psy15108         92 SDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP-------DLSD  164 (223)
Q Consensus        92 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~-------~~~~  164 (223)
                      ..|.+|++|+|+++..... .....+..+|+.|.|||.+.+..|..++|.|++|++++||+ -|+.||.       ..+.
T Consensus       386 aeghikltdygmcke~l~~-gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemm-agrspfdivgm~n~d~nt  463 (593)
T KOG0695|consen  386 AEGHIKLTDYGMCKEGLGP-GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMM-AGRSPFDIVGMDNPDMNT  463 (593)
T ss_pred             cCCceeecccchhhcCCCC-CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHH-cCCCCcceecCCCcccch
Confidence            9999999999998754322 23346688999999999999999999999999999999999 7999994       1222


Q ss_pred             HHHHHH-HHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy15108        165 DQVLSQ-LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP  204 (223)
Q Consensus       165 ~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  204 (223)
                      ...+.+ +.....+  ++...+-....+++..++.||.+|.
T Consensus       464 edylfqvilekqir--iprslsvkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  464 EDYLFQVILEKQIR--IPRSLSVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             hHHHHHHHhhhccc--ccceeehhhHHHHHHhhcCCcHHhc
Confidence            223333 3333233  3556666677889999999999984

>KOG4236|consensus

Probab=99.92  E-value=1e-26  Score=186.04  Aligned_cols=181  Identities=16%  Similarity=0.269  Sum_probs=144.9

Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec
Q psy15108         13 DSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS   92 (223)
Q Consensus        13 ~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~   92 (223)
                      ..++..+|||-+ +|+..++|-.+..             +.+++.....++.||+.||+|||.++|+|+|+||+||++..
T Consensus       634 T~ervFVVMEKl-~GDMLEMILSsEk-------------gRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas  699 (888)
T KOG4236|consen  634 TPERVFVVMEKL-HGDMLEMILSSEK-------------GRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLAS  699 (888)
T ss_pred             CCceEEEEehhh-cchHHHHHHHhhc-------------ccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeecc
Confidence            334455677665 4555555554433             57999999999999999999999999999999999999965


Q ss_pred             C---CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy15108         93 D---LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS  169 (223)
Q Consensus        93 ~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~  169 (223)
                      .   ..+|++|||+++..+....+  +..+||+.|+|||++..+.|..+-|+||+|+|+|.-+ .|..||...  +.+-.
T Consensus       700 ~~~FPQvKlCDFGfARiIgEksFR--rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsL-SGTFPFNEd--EdInd  774 (888)
T KOG4236|consen  700 ASPFPQVKLCDFGFARIIGEKSFR--RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSL-SGTFPFNED--EDIND  774 (888)
T ss_pred             CCCCCceeeccccceeecchhhhh--hhhcCCccccCHHHHhhccccccccceeeeEEEEEEe-cccccCCCc--cchhH
Confidence            4   56899999999987766543  5678999999999999999999999999999999888 799999654  34555


Q ss_pred             HHHhCcccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        170 QLESKKLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       170 ~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +|....+..+.  -..++++..++|..+|+..-.+|-+.+..+.|
T Consensus       775 QIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh  819 (888)
T KOG4236|consen  775 QIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH  819 (888)
T ss_pred             HhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence            66555443332  24678889999999999999999998877644

>KOG1027|consensus

Probab=99.92  E-value=1.2e-26  Score=193.52  Aligned_cols=177  Identities=22%  Similarity=0.384  Sum_probs=134.9

Q ss_pred             CCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC-----CCeE
Q psy15108         23 PRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-----LSVK   97 (223)
Q Consensus        23 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~-----~~~~   97 (223)
                      +.+..||+++++..+.+           .........+.++.|+++||++||+.+|+|||+||+|||+...     ..++
T Consensus       583 ELC~~sL~dlie~~~~d-----------~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~  651 (903)
T KOG1027|consen  583 ELCACSLQDLIESSGLD-----------VEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAK  651 (903)
T ss_pred             hHhhhhHHHHHhccccc-----------hhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEE
Confidence            34678999999975221           0111224567889999999999999999999999999999863     4579


Q ss_pred             EcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         98 ISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        98 l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      |+|||++++.....  .....+..|+..|.|||.+.......++||+|+||++|+.++.|..||......+  ..|..+.
T Consensus       652 iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~~  729 (903)
T KOG1027|consen  652 ISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTGN  729 (903)
T ss_pred             ecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcCc
Confidence            99999998765432  4445677889999999999888888899999999999999988899997554332  2334433


Q ss_pred             ccCCCCC-CChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSS-KTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~-~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....... ....+..++|.+|++++|..||++.+|+.|
T Consensus       730 ~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  730 YTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             cceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCC
Confidence            3332211 112278999999999999999999999855

>KOG1006|consensus

Probab=99.92  E-value=8.4e-26  Score=166.90  Aligned_cols=184  Identities=13%  Similarity=0.193  Sum_probs=137.9

Q ss_pred             CCCCCCCCCCCCCCCChHHH---HHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCe
Q psy15108         13 DSKDKSGSGKPRVKGDLKQF---LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNC   88 (223)
Q Consensus        13 ~~~~~~~v~~~~~~g~L~~~---l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~ni   88 (223)
                      ++++.--+..++..-||..+   +..-..             ..++|+-+-.|..-.+.||.||-. ..|+|||+||+||
T Consensus       133 F~EGdcWiCMELMd~SlDklYk~vy~vq~-------------~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNI  199 (361)
T KOG1006|consen  133 FSEGDCWICMELMDISLDKLYKRVYSVQK-------------SRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNI  199 (361)
T ss_pred             hcCCceeeeHHHHhhhHHHHHHHHHHHHh-------------ccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhhe
Confidence            56664444444455555444   333322             468999999999999999999975 4899999999999


Q ss_pred             eeecCCCeEEcCCCCCcccchhhhhhhhcCCccccccccccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-H
Q psy15108         89 LISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-D  165 (223)
Q Consensus        89 l~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-~  165 (223)
                      |++..|.+|++|||++.....+-  ....-.|-..|+|||-+..  ..|+.++|+||||++++|++ +|..|+...+. .
T Consensus       200 Lldr~G~vKLCDFGIcGqLv~Si--AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvA-tG~fPyr~w~svf  276 (361)
T KOG1006|consen  200 LLDRHGDVKLCDFGICGQLVDSI--AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVA-TGNFPYRKWDSVF  276 (361)
T ss_pred             EEecCCCEeeecccchHhHHHHH--HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeee-cCCCCcchHHHHH
Confidence            99999999999999986543332  3334456677999998863  34889999999999999999 89999987654 3


Q ss_pred             HHHHHHHhCcc-cCCCCC---CChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        166 QVLSQLESKKL-CWKHSS---KTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       166 ~~~~~~~~~~~-~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +.+.++..+.+ ....+.   ..+..+..++..|+..|-..||.+.+++.+
T Consensus       277 eql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  277 EQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             HHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            44444444422 222222   367889999999999999999999998754

>KOG0608|consensus

Probab=99.92  E-value=3.3e-25  Score=180.70  Aligned_cols=161  Identities=16%  Similarity=0.180  Sum_probs=130.6

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +||+|.+||++-.+|-+-+.               |.|+.+..++.++..|+++.|+.|++||||||.|||||.+|++||
T Consensus       706 FVMdYIPGGDmMSLLIrmgI---------------FeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKL  770 (1034)
T KOG0608|consen  706 FVMDYIPGGDMMSLLIRMGI---------------FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKL  770 (1034)
T ss_pred             EEEeccCCccHHHHHHHhcc---------------CHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceee
Confidence            89999999999999987765               999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccch---------h------------------------hhh--------hhhcCCcccccccccccccCCCCc
Q psy15108         99 SLSGLSKDTYQ---------K------------------------EYY--------KYRNAILPLRWLPYEAVFDDEFST  137 (223)
Q Consensus        99 ~df~~~~~~~~---------~------------------------~~~--------~~~~~~~~~~~~~pe~~~~~~~~~  137 (223)
                      +|||++.-+.-         .                        +.+        .....+|+..|++||++....++.
T Consensus       771 TDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q  850 (1034)
T KOG0608|consen  771 TDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQ  850 (1034)
T ss_pred             eeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccc
Confidence            99999742210         0                        000        011347888999999999999999


Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh--CcccCCCCCCChHHHHHHHHHh
Q psy15108        138 KSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES--KKLCWKHSSKTPEYITSLHEKC  195 (223)
Q Consensus       138 ~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~  195 (223)
                      ..|.|+.|||+|||+ .|+.||....+.+.-..+..  ..+-.+...+++.++.++|.++
T Consensus       851 ~cdwws~gvil~em~-~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kL  909 (1034)
T KOG0608|consen  851 LCDWWSVGVILYEML-VGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKL  909 (1034)
T ss_pred             cchhhHhhHHHHHHh-hCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHH
Confidence            999999999999999 89999987766554433322  2233344567889998888763

>KOG0662|consensus

Probab=99.92  E-value=4.6e-25  Score=154.71  Aligned_cols=178  Identities=21%  Similarity=0.302  Sum_probs=140.3

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|+||| ..+|..+..+.+              +.++.+.+..++.|+++|+.++|+++++|||+||+|.++..+|..|+
T Consensus        78 lvfe~c-dqdlkkyfdsln--------------g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkl  142 (292)
T KOG0662|consen   78 LVFEFC-DQDLKKYFDSLN--------------GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKL  142 (292)
T ss_pred             EeHHHh-hHHHHHHHHhcC--------------CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEe
Confidence            667766 467888776544              36999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh----
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES----  173 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~----  173 (223)
                      .|||+++.++..- .-+...+.+.+|.+|.++++.+ |+.+.|+||.|||+.|+..-|..-|++.+....+..+..    
T Consensus       143 adfglarafgipv-rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~  221 (292)
T KOG0662|consen  143 ADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT  221 (292)
T ss_pred             cccchhhhcCCce-EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCC
Confidence            9999998765432 2234557789999999998876 789999999999999999777877888876655544422    


Q ss_pred             -CcccCCCC----------------------CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 -KKLCWKHS----------------------SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 -~~~~~~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       ....|+-.                      ++....-++++++++.-+|.+|.++++.+++
T Consensus       222 p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  222 PTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             CccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence             11122211                      1122334689999999999999999998875

>KOG0984|consensus

Probab=99.91  E-value=5.2e-24  Score=152.18  Aligned_cols=122  Identities=23%  Similarity=0.247  Sum_probs=101.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCccccccccc
Q psy15108         50 RVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYE  128 (223)
Q Consensus        50 ~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe  128 (223)
                      .+..++|..+-+++..+++|+.|||++ .++|||+||+|||++..|++|+||||.+....++-  ......|-..|+|||
T Consensus       141 ~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi--Akt~daGCkpYmaPE  218 (282)
T KOG0984|consen  141 KGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI--AKTMDAGCKPYMAPE  218 (282)
T ss_pred             cCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh--HHHHhcCCCccCChh
Confidence            346799999999999999999999986 89999999999999999999999999987654443  222234556699999


Q ss_pred             ccc----cCCCCcccchHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHhC
Q psy15108        129 AVF----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDL-SDDQVLSQLESK  174 (223)
Q Consensus       129 ~~~----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~-~~~~~~~~~~~~  174 (223)
                      .+.    +..|+.++||||||+++.||+ .++.||... .+.+.+.++...
T Consensus       219 ri~~e~n~~gY~vksDvWSLGItmiElA-~lr~PY~~w~tpF~qLkqvVee  268 (282)
T KOG0984|consen  219 RINPELNQKGYSVKSDVWSLGITMIEMA-ILRFPYESWGTPFQQLKQVVEE  268 (282)
T ss_pred             hcCcccCcccceeehhhhhhhhhhhhhh-hccccccccCCHHHHHHHHhcC
Confidence            875    346899999999999999999 799998644 567777777665

>KOG1345|consensus

Probab=99.90  E-value=1.1e-23  Score=156.18  Aligned_cols=179  Identities=18%  Similarity=0.196  Sum_probs=129.2

Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec
Q psy15108         13 DSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS   92 (223)
Q Consensus        13 ~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~   92 (223)
                      ..+-+-+++||++.|+|.+-+..+                .+.+....+++.|+++|+.|||+.+++|||||.+|||+-.
T Consensus        93 t~d~YvF~qE~aP~gdL~snv~~~----------------GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~  156 (378)
T KOG1345|consen   93 TSDAYVFVQEFAPRGDLRSNVEAA----------------GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFD  156 (378)
T ss_pred             cCceEEEeeccCccchhhhhcCcc----------------cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEec
Confidence            455567899999999999998653                5789999999999999999999999999999999999743


Q ss_pred             C--CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccC-----CCCcccchHHHHHHHHHHHhCCCCCCCCCC--
Q psy15108         93 D--LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-----EFSTKSDVYAYACLIWEIFNKGEMPFPDLS--  163 (223)
Q Consensus        93 ~--~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-----~~~~~~Di~slG~il~~l~~~~~~p~~~~~--  163 (223)
                      .  .++|++|||++...+..-..    ......|.+||.....     .....+|+|.||++++.++ +|..||....  
T Consensus       157 ~df~rvKlcDFG~t~k~g~tV~~----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cl-tG~~PWQka~~~  231 (378)
T KOG1345|consen  157 ADFYRVKLCDFGLTRKVGTTVKY----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCL-TGKFPWQKASIM  231 (378)
T ss_pred             CCccEEEeeecccccccCceehh----hhhhcccCCcHHHhhccccceEecccccchheeeeeeeee-cCCCcchhhhcc
Confidence            3  57999999998765443211    1223346677765432     2467899999999999999 8999997332  


Q ss_pred             ---HHHHHHHHHhCccc-CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        164 ---DDQVLSQLESKKLC-WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       164 ---~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                         .-+........... +.....+++.+.+++++-+..++++|=...+..+.
T Consensus       232 d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~  284 (378)
T KOG1345|consen  232 DKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM  284 (378)
T ss_pred             CchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence               11222222221111 11234567778889999999999999444444433

>KOG0670|consensus

Probab=99.90  E-value=3.9e-24  Score=170.91  Aligned_cols=191  Identities=18%  Similarity=0.240  Sum_probs=145.6

Q ss_pred             HHHHHhhcCCCCCC--CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCC
Q psy15108          5 QFLLATRKDSKDKS--GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKD   82 (223)
Q Consensus         5 ~~~~~~~~~~~~~~--~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~d   82 (223)
                      +.++..+.|....+  +|+|.+ .-+|.++|++-+.            +-.|....+..++.|+.-||..|-..|++|.|
T Consensus       495 Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~------------nvGL~ikaVRsYaqQLflALklLK~c~vlHaD  561 (752)
T KOG0670|consen  495 HCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGR------------NVGLHIKAVRSYAQQLFLALKLLKKCGVLHAD  561 (752)
T ss_pred             HHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCc------------ccceeehHHHHHHHHHHHHHHHHHhcCeeecc
Confidence            34555555555544  555543 5789999998776            34689999999999999999999999999999


Q ss_pred             CCCCCeeeecC-CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q psy15108         83 IAARNCLISSD-LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD  161 (223)
Q Consensus        83 i~~~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~  161 (223)
                      |||.|||+... ..+||||||-|-....++..+   ......|.|||.+.+.+|+..-|+||+||++||+. +|+.-|++
T Consensus       562 IKPDNiLVNE~k~iLKLCDfGSA~~~~eneitP---YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElY-tGkIlFpG  637 (752)
T KOG0670|consen  562 IKPDNILVNESKNILKLCDFGSASFASENEITP---YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELY-TGKILFPG  637 (752)
T ss_pred             cCccceEeccCcceeeeccCccccccccccccH---HHHHHhccCcceeecCcccCCccceeeceeeEEee-ccceecCC
Confidence            99999999876 457999999886655554222   23345699999999999999999999999999999 89999988


Q ss_pred             CCHHHHHHHHHhCcccCC-------------------------------------------------------CC---CC
Q psy15108        162 LSDDQVLSQLESKKLCWK-------------------------------------------------------HS---SK  183 (223)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~-------------------------------------------------------~~---~~  183 (223)
                      ..+..++...+.-....+                                                       .+   ..
T Consensus       638 ~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~  717 (752)
T KOG0670|consen  638 RTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPK  717 (752)
T ss_pred             CCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHH
Confidence            877666554332000000                                                       00   01


Q ss_pred             ChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        184 TPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       184 ~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .-..+.+|+.+|+..||++|.+..+.+.|
T Consensus       718 ~~~~~rdLLdkml~LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  718 IVQQLRDLLDKMLILDPEKRITVNQALKH  746 (752)
T ss_pred             HHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence            12457889999999999999999999876

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.89  E-value=1.3e-22  Score=150.71  Aligned_cols=148  Identities=24%  Similarity=0.362  Sum_probs=125.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec-CCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~-~~~   95 (223)
                      ..++++++.+++|.+++....              ..++...+..++.++++++.+||+.+++|+|++|.||+++. .+.
T Consensus        66 ~~~~~e~~~~~~l~~~~~~~~--------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~  131 (215)
T cd00180          66 LYLVMEYCEGGSLKDLLKENE--------------GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGK  131 (215)
T ss_pred             EEEEEecCCCCcHHHHHHhcc--------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCc
Confidence            447889999999999998642              24899999999999999999999999999999999999999 889


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++++||+.+........ ..........|.+||..... ..+.++|+|++|++++++                       
T Consensus       132 ~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------  187 (215)
T cd00180         132 VKLADFGLSKLLTSDKS-LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------  187 (215)
T ss_pred             EEEecCCceEEccCCcc-hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------
Confidence            99999998875433211 12234456778999998776 778899999999999998                       


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                                 ..+.+++..|+..+|.+||+++++++++
T Consensus       188 -----------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 -----------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             -----------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                       5689999999999999999999998753

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0576|consensus

Probab=99.87  E-value=2.6e-22  Score=164.41  Aligned_cols=177  Identities=20%  Similarity=0.243  Sum_probs=146.2

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ..||||.+|+|++.-+.++.               +++.++..+.++.++|++|||++|-+|||||..||+++..+.+++
T Consensus        89 icMEycgggslQdiy~~Tgp---------------lselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvkl  153 (829)
T KOG0576|consen   89 ICMEYCGGGSLQDIYHVTGP---------------LSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKL  153 (829)
T ss_pred             EEEEecCCCcccceeeeccc---------------chhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceee
Confidence            67999999999999987654               999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      .|||.+...+.. ........|++.|++||+..   ...|....|+|++|+...|+. .-+.|.....+...........
T Consensus       154 aDfgvsaqitat-i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~-eLqpplfdlhpmr~l~LmTkS~  231 (829)
T KOG0576|consen  154 ADFGVSAQITAT-IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELG-ELQPPLFDLHPMRALFLMTKSG  231 (829)
T ss_pred             cccCchhhhhhh-hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhh-hcCCcccccchHHHHHHhhccC
Confidence            999988654432 22345689999999999853   445888999999999988987 6777777776666665554443


Q ss_pred             ccCC---CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWK---HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +.++   .....++.+-+|++.++..+|++||+++-++.|
T Consensus       232 ~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h  271 (829)
T KOG0576|consen  232 FQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH  271 (829)
T ss_pred             CCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence            4333   234567889999999999999999999887653

>KOG0590|consensus

Probab=99.86  E-value=1.9e-22  Score=170.26  Aligned_cols=179  Identities=16%  Similarity=0.123  Sum_probs=140.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      +..+||||++ +|..++....               .++..++..++.|++.|+.|+|+.|+.|||+|++|+++..++.+
T Consensus       396 ~~~~mE~~~~-Dlf~~~~~~~---------------~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~l  459 (601)
T KOG0590|consen  396 ILQSMEYCPY-DLFSLVMSNG---------------KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGIL  459 (601)
T ss_pred             chhhhhcccH-HHHHHHhccc---------------ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCce
Confidence            3345999999 9999998653               38999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh---hhhhhcCCcccccccccccccCCCCc-ccchHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHH
Q psy15108         97 KISLSGLSKDTYQKE---YYKYRNAILPLRWLPYEAVFDDEFST-KSDVYAYACLIWEIFNKGEMPFPDLSDDQVL-SQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~~~~-~~Di~slG~il~~l~~~~~~p~~~~~~~~~~-~~~  171 (223)
                      |++|||.+..+....   ........+...|+|||++.+.+|+. ..||||.|+++..|. .++.||.-....... ...
T Consensus       460 ki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~-~~~~~Wk~a~~~~~~~~~~  538 (601)
T KOG0590|consen  460 KIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMI-LGRFPWKVAKKSDNSFKTN  538 (601)
T ss_pred             EEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEe-cCCCccccccccccchhhh
Confidence            999999886543221   23445677888899999999999864 599999999999998 789999755433221 110


Q ss_pred             Hh------CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ES------KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..      ..........++...+.+|..||+.+|.+|.++++|++.
T Consensus       539 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d  585 (601)
T KOG0590|consen  539 NYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND  585 (601)
T ss_pred             ccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence            00      001111224567788899999999999999999999853

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.84  E-value=2.4e-20  Score=140.29  Aligned_cols=144  Identities=18%  Similarity=0.169  Sum_probs=115.5

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ...++++++.+++|.+++.....              .+++..+..++.+++.++.+||+.+++|+|+++.||+++.++.
T Consensus        71 ~~~~v~e~~~~~~L~~~~~~~~~--------------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~  136 (225)
T smart00221       71 PLYLVMEYCEGGDLFDYLRKKGG--------------KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGL  136 (225)
T ss_pred             ceEEEEeccCCCCHHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence            35578999999999999986432              1789999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCccccccccccc-ccCCCCcccchHHHHHHHHHHHhCCCCCCCC-CCHH-HHHHHHH
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAV-FDDEFSTKSDVYAYACLIWEIFNKGEMPFPD-LSDD-QVLSQLE  172 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~-~~~~~~~~~Di~slG~il~~l~~~~~~p~~~-~~~~-~~~~~~~  172 (223)
                      ++++|||.+...............+...|++||.. ....++.++|+|++|+++++++ +|+.||.. .+.. ...+.+.
T Consensus       137 ~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~-~g~~pf~~~~~~~~~~~~~~~  215 (225)
T smart00221      137 VKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELL-WGPEPFSGEGEFTSLLSDVWS  215 (225)
T ss_pred             EEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHH-HCCCCccccchhHHHHHHHHh
Confidence            99999998876543321111234456679999998 5566778999999999999999 69999987 4544 5555555


Q ss_pred             hC
Q psy15108        173 SK  174 (223)
Q Consensus       173 ~~  174 (223)
                      .+
T Consensus       216 ~~  217 (225)
T smart00221      216 FG  217 (225)
T ss_pred             cC
Confidence            54

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1152|consensus

Probab=99.83  E-value=1.9e-21  Score=157.29  Aligned_cols=126  Identities=20%  Similarity=0.284  Sum_probs=107.7

Q ss_pred             CCCCCCCC-CCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPR-VKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      +-+++|-. ++-+|.++|.-..               .++|..+..|+.|++-|+++||++||+|||||-+|++++.+|.
T Consensus       644 yyl~te~hg~gIDLFd~IE~kp---------------~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~  708 (772)
T KOG1152|consen  644 YYLETEVHGEGIDLFDFIEFKP---------------RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGF  708 (772)
T ss_pred             eEEEecCCCCCcchhhhhhccC---------------ccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCe
Confidence            44556655 6678999998654               4999999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCC
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPD  161 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~  161 (223)
                      +|++|||-+....+..   +-...||..|.|||++.+.+| ....|||++|+++|.+. +..-||.+
T Consensus       709 ~klidfgsaa~~ksgp---fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytiv-ykenpyyn  771 (772)
T KOG1152|consen  709 VKLIDFGSAAYTKSGP---FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIV-YKENPYYN  771 (772)
T ss_pred             EEEeeccchhhhcCCC---cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEE-eccCCCcC
Confidence            9999999886554443   445678999999999998887 45699999999999998 77778764

>KOG1023|consensus

Probab=99.83  E-value=1.5e-20  Score=152.88  Aligned_cols=202  Identities=18%  Similarity=0.265  Sum_probs=150.0

Q ss_pred             chHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCc-cc
Q psy15108          2 DLKQFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRL-IH   80 (223)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i-~H   80 (223)
                      |+..|+..+.+. +...+|.+||..|+|+|.+.....              .+++.....+++.|+.|+.|+|+..+ .|
T Consensus         8 n~~~f~g~~~~~-~~~~~i~~~c~rGsl~D~i~~~~~--------------~~d~~F~~s~~rdi~~Gl~ylh~s~i~~h   72 (484)
T KOG1023|consen    8 NLNKFIGASVDG-PEMIVIWEYCSRGSLLDILSNEDI--------------KLDYFFILSFIRDISKGLAYLHNSPIGYH   72 (484)
T ss_pred             hhhhheeeEecC-CceEEEEeeecCccHHhHHhcccc--------------CccHHHHHHHHHHHHHHHHHHhcCcceee
Confidence            345555555555 445578899999999999987443              68899999999999999999999866 89


Q ss_pred             CCCCCCCeeeecCCCeEEcCCCCCcccchh-hhhhhhcCCcccccccccccccCC-------CCcccchHHHHHHHHHHH
Q psy15108         81 KDIAARNCLISSDLSVKISLSGLSKDTYQK-EYYKYRNAILPLRWLPYEAVFDDE-------FSTKSDVYAYACLIWEIF  152 (223)
Q Consensus        81 ~di~~~nil~~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~-------~~~~~Di~slG~il~~l~  152 (223)
                      +.+++.|++++..+.+|++|||+....... .............|.+||.+....       .+.+.|+||||++++|++
T Consensus        73 g~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~  152 (484)
T KOG1023|consen   73 GALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL  152 (484)
T ss_pred             eeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence            999999999999999999999987654321 111111112235588999986532       356799999999999999


Q ss_pred             hCCCCCCCCC----CHHHHHHHHHhCcccCCCC-----CCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        153 NKGEMPFPDL----SDDQVLSQLESKKLCWKHS-----SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       153 ~~~~~p~~~~----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       .+..||...    +..++...+.........|     ...++++..++..||..+|.+||+++++...+..+...
T Consensus       153 -~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  153 -FRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             -hccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence             789899753    2345555555522221111     13455788999999999999999999999888776653

>KOG1164|consensus

Probab=99.83  E-value=1.2e-19  Score=144.28  Aligned_cols=191  Identities=17%  Similarity=0.198  Sum_probs=147.0

Q ss_pred             CCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC-
Q psy15108         15 KDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-   93 (223)
Q Consensus        15 ~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~-   93 (223)
                      +++..++....|.||.++.+....             +.|+...++.++.|++.+|+++|+.|++||||||.|+++... 
T Consensus        93 ~~~~~iVM~l~G~sL~dl~~~~~~-------------~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~  159 (322)
T KOG1164|consen   93 EDFNFIVMSLLGPSLEDLRKRNPP-------------GRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSS  159 (322)
T ss_pred             CceeEEEEeccCccHHHHHHhCCC-------------CCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCC
Confidence            334555567889999998876542             579999999999999999999999999999999999999765 


Q ss_pred             ----CCeEEcCCCCCc--ccchhh---hhh----hhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCC
Q psy15108         94 ----LSVKISLSGLSK--DTYQKE---YYK----YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP  160 (223)
Q Consensus        94 ----~~~~l~df~~~~--~~~~~~---~~~----~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~  160 (223)
                          ..+.+.|||+++  ......   ...    .....+|..|.++.+..+.+.+.+.|+||++.++.++. .|..||.
T Consensus       160 ~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~-~g~LPW~  238 (322)
T KOG1164|consen  160 RSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELL-KGSLPWE  238 (322)
T ss_pred             CcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHh-cCCCCCc
Confidence                358999999998  322111   011    12345889999999999999999999999999999998 8889998


Q ss_pred             CCCHHHHHHHHHhCcccCC---CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        161 DLSDDQVLSQLESKKLCWK---HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ..........+........   .....+.++.++...+-..+...+|.+..+...+...+.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~  300 (322)
T KOG1164|consen  239 ALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS  300 (322)
T ss_pred             cccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence            7764333333322211111   2234567788888888889999999999999998887654

>KOG1167|consensus

Probab=99.83  E-value=2.1e-20  Score=145.97  Aligned_cols=180  Identities=17%  Similarity=0.218  Sum_probs=131.2

Q ss_pred             CCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC
Q psy15108         14 SKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD   93 (223)
Q Consensus        14 ~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~   93 (223)
                      .+....|++|+++.+..++..                  .++..++..+++.++.||.++|.+||+||||||.|++.+..
T Consensus       107 nd~v~ivlp~~~H~~f~~l~~------------------~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~  168 (418)
T KOG1167|consen  107 NDQVAIVLPYFEHDRFRDLYR------------------SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRR  168 (418)
T ss_pred             CCeeEEEecccCccCHHHHHh------------------cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccc
Confidence            334568999999999999996                  48899999999999999999999999999999999999865


Q ss_pred             -CCeEEcCCCCCcccc-hh---------------------------------hh---------hhhhcCCcccccccccc
Q psy15108         94 -LSVKISLSGLSKDTY-QK---------------------------------EY---------YKYRNAILPLRWLPYEA  129 (223)
Q Consensus        94 -~~~~l~df~~~~~~~-~~---------------------------------~~---------~~~~~~~~~~~~~~pe~  129 (223)
                       +.-.|+|||++.... ..                                 .+         .......||+.|.|||+
T Consensus       169 t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEv  248 (418)
T KOG1167|consen  169 TQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEV  248 (418)
T ss_pred             cCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHH
Confidence             557899999986210 00                                 00         00113467888999999


Q ss_pred             cccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCH-HHHHH------------HHHh--Cc------------------
Q psy15108        130 VFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLS------------QLES--KK------------------  175 (223)
Q Consensus       130 ~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~-~~~~~------------~~~~--~~------------------  175 (223)
                      +...+ .+.+.|+||.|+|+..++ ++..||..... ...+.            +...  +.                  
T Consensus       249 L~k~~~QttaiDiws~GVI~Lsll-s~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~  327 (418)
T KOG1167|consen  249 LFRCPRQTTAIDIWSAGVILLSLL-SRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVN  327 (418)
T ss_pred             HhhccCcCCccceeeccceeehhh-ccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhc
Confidence            87655 578899999999999999 78888732211 10000            0000  00                  


Q ss_pred             -ccC---------------CC-CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 -LCW---------------KH-SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 -~~~---------------~~-~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       ...               .. ....+..+.+++.+|++.||.+|.++++.++|
T Consensus       328 f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH  381 (418)
T KOG1167|consen  328 FETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH  381 (418)
T ss_pred             hhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence             000               00 01224478899999999999999999999876

>KOG0195|consensus

Probab=99.82  E-value=1e-19  Score=135.56  Aligned_cols=190  Identities=22%  Similarity=0.309  Sum_probs=146.9

Q ss_pred             HHHHHhhcCCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-C-cccCC
Q psy15108          5 QFLLATRKDSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-R-LIHKD   82 (223)
Q Consensus         5 ~~~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~-i~H~d   82 (223)
                      -++.+|-+. +..-.+.-|++.|+|+..++....             -.++..++.+++..+++|+.|||+. . +.--.
T Consensus       251 pvlgacnsp-pnlv~isq~mp~gslynvlhe~t~-------------vvvd~sqav~faldiargmaflhslep~ipr~~  316 (448)
T KOG0195|consen  251 PVLGACNSP-PNLVIISQYMPFGSLYNVLHEQTS-------------VVVDHSQAVRFALDIARGMAFLHSLEPMIPRFY  316 (448)
T ss_pred             hhhhhccCC-CCceEeeeeccchHHHHHHhcCcc-------------EEEecchHHHHHHHHHhhHHHHhhcchhhhhhh
Confidence            344444333 223356789999999999986433             3568889999999999999999985 2 33456


Q ss_pred             CCCCCeeeecCCCeEE--cCCCCCcccchhhhhhhhcCCcccccccccccccCCC---CcccchHHHHHHHHHHHhCCCC
Q psy15108         83 IAARNCLISSDLSVKI--SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEF---STKSDVYAYACLIWEIFNKGEM  157 (223)
Q Consensus        83 i~~~nil~~~~~~~~l--~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~---~~~~Di~slG~il~~l~~~~~~  157 (223)
                      +.+..++++.+...++  .|--++-        ......-.+.|++||.+...+-   -.++|.|||.+++||+- ++..
T Consensus       317 lns~hvmidedltarismad~kfsf--------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~-trev  387 (448)
T KOG0195|consen  317 LNSKHVMIDEDLTARISMADTKFSF--------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELN-TREV  387 (448)
T ss_pred             cccceEEecchhhhheecccceeee--------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhh-cccc
Confidence            7888999998865544  3322221        1122344567999999987663   35799999999999998 8999


Q ss_pred             CCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        158 PFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       158 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ||.+..+.+.--++.-...+..+++..+..+.++|.-|++.||.+||.|+.++..|+++.
T Consensus       388 pfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  388 PFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             ccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            999999888777777776888899999999999999999999999999999999988764

>KOG1290|consensus

Probab=99.81  E-value=5.7e-20  Score=146.08  Aligned_cols=75  Identities=20%  Similarity=0.268  Sum_probs=59.6

Q ss_pred             hHHHHHHhhc-CCCCCC--CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-Cc
Q psy15108          3 LKQFLLATRK-DSKDKS--GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RL   78 (223)
Q Consensus         3 ~~~~~~~~~~-~~~~~~--~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i   78 (223)
                      ++++++.+.. ..++.+  +|+| +-|.+|..+|+....             +.++...+.+|++|++.||.|||.. ||
T Consensus       144 VV~LlD~FkhsGpNG~HVCMVfE-vLGdnLLklI~~s~Y-------------rGlpl~~VK~I~~qvL~GLdYLH~ecgI  209 (590)
T KOG1290|consen  144 VVQLLDHFKHSGPNGQHVCMVFE-VLGDNLLKLIKYSNY-------------RGLPLSCVKEICRQVLTGLDYLHRECGI  209 (590)
T ss_pred             eeeeeccceecCCCCcEEEEEeh-hhhhHHHHHHHHhCC-------------CCCcHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            3445554444 444444  4444 457889999998877             7899999999999999999999976 99


Q ss_pred             ccCCCCCCCeeee
Q psy15108         79 IHKDIAARNCLIS   91 (223)
Q Consensus        79 ~H~di~~~nil~~   91 (223)
                      +|-||||.|||+.
T Consensus       210 IHTDlKPENvLl~  222 (590)
T KOG1290|consen  210 IHTDLKPENVLLC  222 (590)
T ss_pred             cccCCCcceeeee
Confidence            9999999999984

>KOG1165|consensus

Probab=99.77  E-value=9.8e-18  Score=128.07  Aligned_cols=184  Identities=16%  Similarity=0.220  Sum_probs=149.7

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC----
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL----   94 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~----   94 (223)
                      +|++ +-|-||+|+..-.+.              .|+...+..++.|++.-++++|++.++.|||||+|+||...+    
T Consensus       101 LVid-LLGPSLEDLFD~CgR--------------~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~  165 (449)
T KOG1165|consen  101 LVID-LLGPSLEDLFDLCGR--------------RFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDA  165 (449)
T ss_pred             hhhh-hhCcCHHHHHHHhcC--------------cccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCC
Confidence            3443 456788888876654              799999999999999999999999999999999999997553    


Q ss_pred             -CeEEcCCCCCcccchhh------hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---H
Q psy15108         95 -SVKISLSGLSKDTYQKE------YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS---D  164 (223)
Q Consensus        95 -~~~l~df~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~---~  164 (223)
                       .+.++|||+++...+..      ++......||..||+-....+++.+...|+-++|.++.+.+ .|.+||.+..   .
T Consensus       166 n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFL-RGsLPWQGLKA~tn  244 (449)
T KOG1165|consen  166 NVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL-RGSLPWQGLKADTN  244 (449)
T ss_pred             ceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhc-cCCCccccccCcch
Confidence             47899999998765432      44455678899999999999999999999999999999888 8999998764   4


Q ss_pred             HHHHHHHHhCcccCC---CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        165 DQVLSQLESKKLCWK---HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       165 ~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      .+.++.|...+...+   ...++|.++...+.-.-..+-.+-|+++-+...+.+++.
T Consensus       245 K~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld  301 (449)
T KOG1165|consen  245 KEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD  301 (449)
T ss_pred             HHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence            455666655433322   246789999999998889999999999999888888774

>KOG1033|consensus

Probab=99.77  E-value=3.7e-19  Score=142.97  Aligned_cols=171  Identities=23%  Similarity=0.271  Sum_probs=130.7

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ..|..|...+|.++|..+..            ....+....+.++.|++.|+.|   ++.+|+|++|.||++..+..+++
T Consensus       333 I~Mn~c~~~tledWl~rr~~------------~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kI  397 (516)
T KOG1033|consen  333 IQMNLCEKETLEDWLRRRRT------------GEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKI  397 (516)
T ss_pred             hhhhhhhhhhHHHHhhCCCc------------ccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhh
Confidence            56788999999999975443            2456788899999999999999   99999999999999999989999


Q ss_pred             cCCCCCcccchhh-----hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         99 SLSGLSKDTYQKE-----YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        99 ~df~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      .|||+........     ........++..|++||.+.+..|+.++|||+||++++|++..-...+   ........+..
T Consensus       398 gDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~---er~~t~~d~r~  474 (516)
T KOG1033|consen  398 GDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF---ERIATLTDIRD  474 (516)
T ss_pred             hhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH---HHHHhhhhhhc
Confidence            9999876543322     233456688999999999999999999999999999999984122222   22344444555


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPS  208 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  208 (223)
                      +.+++..-.+.|.+ +.|+.+++...|.+||++.+
T Consensus       475 g~ip~~~~~d~p~e-~~ll~~lls~~p~~RP~~~~  508 (516)
T KOG1033|consen  475 GIIPPEFLQDYPEE-YTLLQQLLSPSPEERPSAIE  508 (516)
T ss_pred             CCCChHHhhcCcHH-HHHHHHhcCCCcccCchHHH
Confidence            43332233344444 67999999999999995543

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.76  E-value=1.4e-19  Score=138.95  Aligned_cols=162  Identities=18%  Similarity=0.272  Sum_probs=106.0

Q ss_pred             CCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCC
Q psy15108         23 PRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG  102 (223)
Q Consensus        23 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~  102 (223)
                      +-..+||.+++..-.....        ....+.....+.+..|+++.+++||+.|++|+||+|+|++++.+|.+.++||+
T Consensus       119 P~~~~dL~~~~~~l~~~~~--------~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~  190 (288)
T PF14531_consen  119 PRAQGDLQDLVEALFSRAQ--------THSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFS  190 (288)
T ss_dssp             E--SEEHHHHHHHHHHHTT--------TSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GG
T ss_pred             chhhhcHHHHHHHHhhccc--------ccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChH
Confidence            3456788888653221000        11234555667777999999999999999999999999999999999999998


Q ss_pred             CCcccchhhhhhhhcCCccccccccccccc--------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108        103 LSKDTYQKEYYKYRNAILPLRWLPYEAVFD--------DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--------~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .....+.....    ...+..|.|||....        ..++.+.|.|++|+++|.++ ++..||..........     
T Consensus       191 ~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW-C~~lPf~~~~~~~~~~-----  260 (288)
T PF14531_consen  191 SLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW-CGRLPFGLSSPEADPE-----  260 (288)
T ss_dssp             GEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH-HSS-STCCCGGGSTSG-----
T ss_pred             HHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH-HccCCCCCCCcccccc-----
Confidence            76554432211    233456788887533        24678899999999999999 8999998664432221     


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCC
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQR  203 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R  203 (223)
                       ..+..+...|+.++.+|..+|+.+|.+|
T Consensus       261 -~~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  261 -WDFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             -GGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             -ccchhcCCcCHHHHHHHHHHccCCcccC
Confidence             1344455889999999999999999887

>KOG1240|consensus

Probab=99.76  E-value=2e-18  Score=148.74  Aligned_cols=175  Identities=19%  Similarity=0.154  Sum_probs=125.3

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ..+..+...+|+|.|..+..               +...+.+-|+.|++.|+..+|+.|++|||||.+|||++.-+++.+
T Consensus        97 ylvRqyvkhnLyDRlSTRPF---------------L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~L  161 (1431)
T KOG1240|consen   97 YLVRQYVKHNLYDRLSTRPF---------------LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYL  161 (1431)
T ss_pred             HHHHHHHhhhhhhhhccchH---------------HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhh
Confidence            34555677899999987655               788889999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccch--hhhhh----hhcCCcccccccccccccC----------C-CCcccchHHHHHHHHHHHhCCCCCCCC
Q psy15108         99 SLSGLSKDTYQ--KEYYK----YRNAILPLRWLPYEAVFDD----------E-FSTKSDVYAYACLIWEIFNKGEMPFPD  161 (223)
Q Consensus        99 ~df~~~~~~~~--~~~~~----~~~~~~~~~~~~pe~~~~~----------~-~~~~~Di~slG~il~~l~~~~~~p~~~  161 (223)
                      +||.-.+...-  ...-.    +-+.....+|+|||-+...          . .+.+.||||+||+++|+++.|+.+|.-
T Consensus       162 tDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L  241 (1431)
T KOG1240|consen  162 TDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL  241 (1431)
T ss_pred             hcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH
Confidence            99986543211  11111    1123334679999976431          1 467899999999999999788888841


Q ss_pred             CCHHHHHHHHHhC-ccc--CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        162 LSDDQVLSQLESK-KLC--WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       162 ~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .   +.... +.+ ...  .....-.+..++.++..|++.||.+|.++++.++.
T Consensus       242 S---QL~aY-r~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  242 S---QLLAY-RSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             H---HHHhH-hccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            1   11100 000 000  00001112358899999999999999999999876

>KOG1163|consensus

Probab=99.73  E-value=2.6e-17  Score=120.75  Aligned_cols=183  Identities=16%  Similarity=0.193  Sum_probs=141.6

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC---CC
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD---LS   95 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~---~~   95 (223)
                      +|| ..-|-||.++..-...              .|+...++-++.|++.-++|+|.++++||||||+|+++.-.   ..
T Consensus        88 lVM-dLLGPsLEdLfnfC~R--------------~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~k  152 (341)
T KOG1163|consen   88 LVM-DLLGPSLEDLFNFCSR--------------RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNK  152 (341)
T ss_pred             eee-eccCccHHHHHHHHhh--------------hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccce
Confidence            444 4567788888874433              59999999999999999999999999999999999998654   45


Q ss_pred             eEEcCCCCCcccchhh------hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---H
Q psy15108         96 VKISLSGLSKDTYQKE------YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD---Q  166 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~---~  166 (223)
                      +-++|||+++...+..      ++......+|..|.+-.+..+.+.+...|.-|+|.++.+.. .|.+||.+....   +
T Consensus       153 l~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfn-rG~LPWQglka~tk~Q  231 (341)
T KOG1163|consen  153 LYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFN-RGSLPWQGLKAATKKQ  231 (341)
T ss_pred             EEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeee-cCCCcccccchhhHHH
Confidence            7899999998765432      33445567888898887777777888999999999888777 899999887543   3


Q ss_pred             HHHHHHhCccc---CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        167 VLSQLESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       167 ~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ..+.|...+..   ...+...|.++...+.-|-...-++-|+..-+.+.+.-++
T Consensus       232 KyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf  285 (341)
T KOG1163|consen  232 KYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF  285 (341)
T ss_pred             HHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence            34444333222   2335788999999999999999999999877666554443

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.73  E-value=8e-17  Score=127.13  Aligned_cols=182  Identities=21%  Similarity=0.232  Sum_probs=141.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC-Ce
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-SV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~-~~   96 (223)
                      .++++++.++++.+++......            ..++......++.|++.++.++|+.+++|||+||.||+++..+ .+
T Consensus        74 ~~~~~~~~~~~l~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~  141 (384)
T COG0515          74 YLVMEYVDGGSLEDLLKKIGRK------------GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVV  141 (384)
T ss_pred             EEEEecCCCCcHHHHHHhcccc------------cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeE
Confidence            5789999999999888764320            2589999999999999999999999999999999999999988 69


Q ss_pred             EEcCCCCCcccchhhhh-----hhhcCCccccccccccccc---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCH----
Q psy15108         97 KISLSGLSKDTYQKEYY-----KYRNAILPLRWLPYEAVFD---DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----  164 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~---~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~----  164 (223)
                      +++|||.+.........     ......++..|.+||....   .......|+|++|+++++++ .+..||.....    
T Consensus       142 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~-~~~~p~~~~~~~~~~  220 (384)
T COG0515         142 KLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELL-TGLPPFEGEKNSSAT  220 (384)
T ss_pred             EEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHH-hCCCCCCCCCccccH
Confidence            99999998744332211     2356678899999999887   46788999999999999988 78888876653    


Q ss_pred             HHHHHHHHhCccc-CC--CCCCC----hHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        165 DQVLSQLESKKLC-WK--HSSKT----PEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       165 ~~~~~~~~~~~~~-~~--~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......+...... ..  .....    ...+.+++..++..+|..|.+..+....
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         221 SQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            4444444443222 11  11111    2568899999999999999998877654

>KOG4158|consensus

Probab=99.73  E-value=5.2e-17  Score=126.98  Aligned_cols=172  Identities=16%  Similarity=0.136  Sum_probs=121.8

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee--cC--C
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS--SD--L   94 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~--~~--~   94 (223)
                      +||..+ ..+|.+++-.+                ..+.....-++.|+++|+.|||++|+.|||+|++||++.  .+  .
T Consensus       320 lvMkrY-~~tLr~yl~~~----------------~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P  382 (598)
T KOG4158|consen  320 LVMKRY-RQTLREYLWTR----------------HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIP  382 (598)
T ss_pred             Eehhcc-hhhHHHHHhcC----------------CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCc
Confidence            445443 56899999754                357777888899999999999999999999999999974  33  3


Q ss_pred             CeEEcCCCCCcccchhhhh-----hhhcCCcccccccccccccCC------CCcccchHHHHHHHHHHHhCCCCCCCCCC
Q psy15108         95 SVKISLSGLSKDTYQKEYY-----KYRNAILPLRWLPYEAVFDDE------FSTKSDVYAYACLIWEIFNKGEMPFPDLS  163 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~~------~~~~~Di~slG~il~~l~~~~~~p~~~~~  163 (223)
                      .+.+.|||++..-......     ..-..-+.-..++||+....+      ...++|.|+.|-+-||++ +..-||....
T Consensus       383 ~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIf-g~~NPFY~rG  461 (598)
T KOG4158|consen  383 QLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIF-GRSNPFYKRG  461 (598)
T ss_pred             EEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHh-ccCCcccccc
Confidence            4689999987543221110     011234455678999875432      235899999999999999 7888998743


Q ss_pred             HHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHH
Q psy15108        164 DDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPS  208 (223)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  208 (223)
                      ....-...-+....+..+..+++.+.+++...++.||.+|++.+-
T Consensus       462 em~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~i  506 (598)
T KOG4158|consen  462 EMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNI  506 (598)
T ss_pred             hheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccH
Confidence            322111111111234456788999999999999999999998643

>KOG0603|consensus

Probab=99.71  E-value=6.7e-18  Score=138.27  Aligned_cols=165  Identities=17%  Similarity=0.200  Sum_probs=137.7

Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec
Q psy15108         13 DSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS   92 (223)
Q Consensus        13 ~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~   92 (223)
                      +..+..+++++..+|+|...+.+..               .+++.....+..+++-++.++|+.+++|+|+|+.||+++.
T Consensus        68 t~~kl~l~ld~~rgg~lft~l~~~~---------------~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~  132 (612)
T KOG0603|consen   68 TDGKLYLILDFLRGGDLFTRLSKEV---------------MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLL  132 (612)
T ss_pred             cccchhHhhhhcccchhhhccccCC---------------chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecc
Confidence            4444568889999999999887654               4899999999999999999999999999999999999999


Q ss_pred             CCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         93 DLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        93 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      .|.+++.|||+++.....+     ...++..|++||++.  .....+|.|++|++.++++ +|..||..    ++...|.
T Consensus       133 ~Ghi~~tdfglske~v~~~-----~~cgt~eymApEI~~--gh~~a~D~ws~gvl~fell-tg~~pf~~----~~~~~Il  200 (612)
T KOG0603|consen  133 EGHIKLTDFGLSKEAVKEK-----IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELL-TGTLPFGG----DTMKRIL  200 (612)
T ss_pred             cCccccCCchhhhHhHhhh-----hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHh-hCCCCCch----HHHHHHh
Confidence            9999999999987543332     227789999999987  5677899999999999999 89999987    4555554


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCH
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF  206 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~  206 (223)
                      ..  .+..+...+..+.+++..++..+|.+|...
T Consensus       201 ~~--~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  201 KA--ELEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             hh--ccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence            43  244466778889999999999999999654

>KOG0606|consensus

Probab=99.69  E-value=6.5e-17  Score=139.16  Aligned_cols=137  Identities=20%  Similarity=0.366  Sum_probs=117.5

Q ss_pred             HHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchh--------------hhhhhhcCCccccccccccccc
Q psy15108         67 ALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--------------EYYKYRNAILPLRWLPYEAVFD  132 (223)
Q Consensus        67 ~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~--------------~~~~~~~~~~~~~~~~pe~~~~  132 (223)
                      +-+++|||+.||+|||+||.|.+++.-|.+|++|||+++.....              .........+++.|.+||++..
T Consensus       153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr  232 (1205)
T KOG0606|consen  153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR  232 (1205)
T ss_pred             hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh
Confidence            67899999999999999999999999999999999998753211              0111234578999999999999


Q ss_pred             CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCC-CCCChHHHHHHHHHhcCCCCCCCC
Q psy15108        133 DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH-SSKTPEYITSLHEKCIHPHPHQRP  204 (223)
Q Consensus       133 ~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rp  204 (223)
                      +.|...+|.|++|+|+|+.+ .|..||.+..+++.+.++......|+. ....+.+..+++..+|+.+|..|-
T Consensus       233 qgygkpvdwwamGiIlyeFL-VgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  233 QGYGKPVDWWAMGIILYEFL-VGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             hccCCCccHHHHHHHHHHHh-eeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence            99999999999999999999 899999999999999988776666654 346788999999999999999984

>KOG1166|consensus

Probab=99.64  E-value=1.2e-15  Score=132.86  Aligned_cols=179  Identities=14%  Similarity=0.182  Sum_probs=137.2

Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec
Q psy15108         13 DSKDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS   92 (223)
Q Consensus        13 ~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~   92 (223)
                      +.+...+|++|.+-|||.+++..++               .+++.-++.+..|++..++.||..+|+|+||||+|+++..
T Consensus       765 ~~~~S~lv~ey~~~Gtlld~~N~~~---------------~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~  829 (974)
T KOG1166|consen  765 FQNASVLVSEYSPYGTLLDLINTNK---------------VMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRR  829 (974)
T ss_pred             cCCcceeeeeccccccHHHhhccCC---------------CCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeec
Confidence            6667779999999999999998554               4899999999999999999999999999999999999853


Q ss_pred             -------CCCeEEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH
Q psy15108         93 -------DLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD  164 (223)
Q Consensus        93 -------~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~  164 (223)
                             ...++|+|||-+....-.. ...+.....+-.+.++|...++++++..|.|.+.-+++.|+ .|+.       
T Consensus       830 ~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mL-FG~y-------  901 (974)
T KOG1166|consen  830 EICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVML-FGKY-------  901 (974)
T ss_pred             ccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHH-HHHH-------
Confidence                   2458999999887543221 23455566677788999999999999999999999999998 4442       


Q ss_pred             HHHHHHHHhCcccCCCCCCChH-----HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        165 DQVLSQLESKKLCWKHSSKTPE-----YITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                         ++ ...+ ..|....+++.     -..+++..+|+.|...=|.+.++...+++.+.+
T Consensus       902 ---~q-~~~g-~~~~~~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~  956 (974)
T KOG1166|consen  902 ---ME-VKNG-SSWMVKTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAE  956 (974)
T ss_pred             ---HH-hcCC-cceeccccchhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHH
Confidence               11 1222 33433333332     244688888887777778888888888877643

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.51  E-value=1.6e-14  Score=106.24  Aligned_cols=73  Identities=23%  Similarity=0.109  Sum_probs=63.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCcccCCCCCCCeeeecCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .+||||+.++++...+...               .++++..+..++.|++.+|.++ |+.|++||||||.||+++ ++.+
T Consensus        93 ~iVmE~i~g~~l~~~~~~~---------------~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v  156 (190)
T cd05147          93 VLVMEFIGDDGWAAPRLKD---------------APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKL  156 (190)
T ss_pred             EEEEEEeCCCCCcchhhhc---------------CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcE
Confidence            4899999998887654332               3589999999999999999999 799999999999999998 4789


Q ss_pred             EEcCCCCCcc
Q psy15108         97 KISLSGLSKD  106 (223)
Q Consensus        97 ~l~df~~~~~  106 (223)
                      +++|||++..
T Consensus       157 ~LiDFG~a~~  166 (190)
T cd05147         157 YIIDVSQSVE  166 (190)
T ss_pred             EEEEcccccc
Confidence            9999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.48  E-value=1.3e-14  Score=108.50  Aligned_cols=98  Identities=10%  Similarity=0.080  Sum_probs=73.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||++|.+|.++..                   ++++    ...+++.++..+|+.|++|+|++|.||+++.++ +
T Consensus       118 ~~lvmEyi~G~tL~~~~~-------------------~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i  173 (232)
T PRK10359        118 YIMLIEYIEGVELNDMPE-------------------ISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-L  173 (232)
T ss_pred             eEEEEEEECCccHHHhhh-------------------ccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-E
Confidence            347999999999988742                   4443    356999999999999999999999999999888 9


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI  151 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l  151 (223)
                      +++|||............             .....+.+..++|+|+||+++...
T Consensus       174 ~liDfg~~~~~~e~~a~d-------------~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        174 RIIDLSGKRCTAQRKAKD-------------RIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             EEEECCCcccccchhhHH-------------HHHHHhHhcccccccceeEeehHH
Confidence            999999876443222110             022234456789999999886644

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.47  E-value=4.6e-14  Score=112.85  Aligned_cols=94  Identities=13%  Similarity=0.039  Sum_probs=70.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCC-CCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI-AARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di-~~~nil~~~~~~   95 (223)
                      ..+||||+++++|.. +.   .               ...   ..++.++++||.|||+.|++|||| ||.||+++.++.
T Consensus        93 ~~LVmE~~~G~~L~~-~~---~---------------~~~---~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~  150 (365)
T PRK09188         93 DGLVRGWTEGVPLHL-AR---P---------------HGD---PAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGE  150 (365)
T ss_pred             cEEEEEccCCCCHHH-hC---c---------------cch---HHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCC
Confidence            448899999999962 21   1               111   467889999999999999999999 999999998899


Q ss_pred             eEEcCCCCCcccchhh--hh-----hhhcCCccccccccccccc
Q psy15108         96 VKISLSGLSKDTYQKE--YY-----KYRNAILPLRWLPYEAVFD  132 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~--~~-----~~~~~~~~~~~~~pe~~~~  132 (223)
                      ++++|||+++......  ..     ......+++.|.+||.+..
T Consensus       151 ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        151 AAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             EEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            9999999998654322  00     1124456677888888753

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.45  E-value=9.1e-14  Score=102.32  Aligned_cols=75  Identities=16%  Similarity=0.010  Sum_probs=63.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~~   96 (223)
                      -+||||+.++++.......               ..++...+..++.|++.++.++|+ .|++|+||||.||+++ ++.+
T Consensus        93 ~lVmE~~~g~~~~~~~l~~---------------~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~  156 (190)
T cd05145          93 VLVMEFIGDDGSPAPRLKD---------------VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKP  156 (190)
T ss_pred             EEEEEEecCCCchhhhhhh---------------ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCE
Confidence            3799999998654432222               247889999999999999999999 9999999999999998 7899


Q ss_pred             EEcCCCCCcccc
Q psy15108         97 KISLSGLSKDTY  108 (223)
Q Consensus        97 ~l~df~~~~~~~  108 (223)
                      +++|||++....
T Consensus       157 ~liDFG~a~~~~  168 (190)
T cd05145         157 YIIDVSQAVELD  168 (190)
T ss_pred             EEEEcccceecC
Confidence            999999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.43  E-value=3.4e-13  Score=99.07  Aligned_cols=121  Identities=10%  Similarity=-0.032  Sum_probs=81.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCC-CCCCeeeecCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI-AARNCLISSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di-~~~nil~~~~~~~   96 (223)
                      .++|+|+.|.+|.+.+.                   ..   ...++.|++.++.++|+.|++|+|| ||.||+++.++.+
T Consensus        74 ~lvmeyI~G~~L~~~~~-------------------~~---~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i  131 (218)
T PRK12274         74 HLDRSYLAGAAMYQRPP-------------------RG---DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSP  131 (218)
T ss_pred             EEEEeeecCccHHhhhh-------------------hh---hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCE
Confidence            47899999999875431                   11   1346789999999999999999999 7999999999999


Q ss_pred             EEcCCCCCcccchhhh----hh--------hhcCCcccccccccccccC-CCC-cccchHHHHHHHHHHHhCCCCCCC
Q psy15108         97 KISLSGLSKDTYQKEY----YK--------YRNAILPLRWLPYEAVFDD-EFS-TKSDVYAYACLIWEIFNKGEMPFP  160 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~----~~--------~~~~~~~~~~~~pe~~~~~-~~~-~~~Di~slG~il~~l~~~~~~p~~  160 (223)
                      +++|||++........    ..        ..-...++.++.|+...-. ..+ ...+.++.|..+|.++|.+-..|.
T Consensus       132 ~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        132 AVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             EEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence            9999999975433221    00        0011233445555432211 223 345566889999999954444443

>KOG1266|consensus

Probab=99.39  E-value=2.8e-12  Score=98.51  Aligned_cols=181  Identities=15%  Similarity=0.110  Sum_probs=121.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC--CcccCCCCCCCeeeecCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK--RLIHKDIAARNCLISSDL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--~i~H~di~~~nil~~~~~   94 (223)
                      ..++.+|+.-|+|.++|+..++           .+..+......+++-||++||.|||+.  .++|+++.-+.|++..++
T Consensus       147 viFiteymssgs~~~fLkrt~~-----------~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ng  215 (458)
T KOG1266|consen  147 VIFITEYMSSGSLKQFLKRTKK-----------NQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNG  215 (458)
T ss_pred             eEEEEecccchhHHHHHHHHHH-----------hhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCc
Confidence            4477899999999999998876           445788999999999999999999985  699999999999999888


Q ss_pred             CeEEcCCCCCcccchhh---hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         95 SVKISLSGLSKDTYQKE---YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      -+|+.--........-.   ........+.+.|.+|+.=.....+.++|||+||....+|....-.|-.+......-..+
T Consensus       216 LIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~i  295 (458)
T KOG1266|consen  216 LIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENI  295 (458)
T ss_pred             eEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhh
Confidence            88875432221111111   111122234466777776544556788999999988888862222233322222222222


Q ss_pred             HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      .....-..  .   .--+.++.+|++..|..||++++++.|.
T Consensus       296 a~~i~~le--n---~lqr~~i~kcl~~eP~~rp~ar~llfHp  332 (458)
T KOG1266|consen  296 ANVIIGLE--N---GLQRGSITKCLEGEPNGRPDARLLLFHP  332 (458)
T ss_pred             hhheeecc--C---ccccCcCcccccCCCCCCcchhhhhcCc
Confidence            22111111  1   1124688899999999999999988663

>KOG0590|consensus

Probab=99.33  E-value=1.6e-13  Score=116.56  Aligned_cols=180  Identities=17%  Similarity=0.172  Sum_probs=136.6

Q ss_pred             CCCCCCCCCCCChHHHH-HHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh-cCCcccCCCCCCCeeeecCC
Q psy15108         17 KSGSGKPRVKGDLKQFL-LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS-DKRLIHKDIAARNCLISSDL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l-~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~i~H~di~~~nil~~~~~   94 (223)
                      +-.+.+|..+|++.+.+ +...              ...+....-.++.|+..++.|+| ..++.|+|++|+|.+++..+
T Consensus        96 ~~~~~~~s~g~~~f~~i~~~~~--------------~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~  161 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLFSKISHPDS--------------TGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESG  161 (601)
T ss_pred             cccccCcccccccccccccCCc--------------cCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCC
Confidence            34778889999999988 4322              14667778888999999999999 99999999999999999999


Q ss_pred             -CeEEcCCCCCcccch-hh-hhhhhcCCc-ccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH-
Q psy15108         95 -SVKISLSGLSKDTYQ-KE-YYKYRNAIL-PLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL-  168 (223)
Q Consensus        95 -~~~l~df~~~~~~~~-~~-~~~~~~~~~-~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~-  168 (223)
                       ..+..|||++..... .+ ........+ ++.|.+||...+..+ ....|+||.|+++..++ .|..||......... 
T Consensus       162 ~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~-~g~~p~~~~~~~~~~~  240 (601)
T KOG0590|consen  162 SALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAML-TGELPWDFPSRKDGRY  240 (601)
T ss_pred             CcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccc-cCCCCccccccccccc
Confidence             899999999876654 22 333344556 888999999887544 56799999999999999 899999766543321 


Q ss_pred             H-HHHhC-cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHH
Q psy15108        169 S-QLESK-KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVT  211 (223)
Q Consensus       169 ~-~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  211 (223)
                      . ..... ...............+++.+++..+|..|.+.+++..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  241 SSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             eeecccccccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            1 11111 1123334566777889999999999999999988753

>smart00090 RIO RIO-like kinase

Probab=99.26  E-value=2.7e-12  Score=97.57  Aligned_cols=74  Identities=15%  Similarity=0.059  Sum_probs=63.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR-LIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~~~nil~~~~~~   95 (223)
                      ..+||||+.+++|...+...               ..+....+..++.|++.++.+||+.| ++|+|++|.||+++ ++.
T Consensus       123 ~~lV~E~~~g~~L~~~~~~~---------------~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~  186 (237)
T smart00090      123 NVLVMEFIGGDGLPAPRLKD---------------VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGK  186 (237)
T ss_pred             ceEEEEEecCCccccccccc---------------CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCC
Confidence            34899999999987765322               23667778899999999999999999 99999999999999 788


Q ss_pred             eEEcCCCCCcc
Q psy15108         96 VKISLSGLSKD  106 (223)
Q Consensus        96 ~~l~df~~~~~  106 (223)
                      ++++|||.+..
T Consensus       187 i~LiDFg~a~~  197 (237)
T smart00090      187 VVIIDVSQSVE  197 (237)
T ss_pred             EEEEEChhhhc
Confidence            99999998763

>KOG0606|consensus

Probab=99.18  E-value=4.1e-11  Score=104.16  Aligned_cols=173  Identities=17%  Similarity=0.219  Sum_probs=143.4

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++++|..+|+|...|+..+               ..+++-+...+..+..+.++||...+.|+|++|.|++....+..++
T Consensus       881 L~~~~~~~~~~~Skl~~~~---------------~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l  945 (1205)
T KOG0606|consen  881 LVGHYLNGGDLPSKLHNSG---------------CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPL  945 (1205)
T ss_pred             hhhHHhccCCchhhhhcCC---------------CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCccc
Confidence            7889999999999998754               3777888888899999999999999999999999999999999999


Q ss_pred             cCCCCCcccch---------------------h---------hhhhhhcCCcccccccccccccCCCCcccchHHHHHHH
Q psy15108         99 SLSGLSKDTYQ---------------------K---------EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLI  148 (223)
Q Consensus        99 ~df~~~~~~~~---------------------~---------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il  148 (223)
                      .+|+......-                     .         +........+++.|++||...+......+|.|++|+.+
T Consensus       946 ~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l 1025 (1205)
T KOG0606|consen  946 TDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCL 1025 (1205)
T ss_pred             CccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhh
Confidence            88873221100                     0         01223345778899999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhCcccCCCC-CCChHHHHHHHHHhcCCCCCCCCCHH
Q psy15108        149 WEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS-SKTPEYITSLHEKCIHPHPHQRPTFP  207 (223)
Q Consensus       149 ~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~dp~~Rps~~  207 (223)
                      ++.+ +|..||.......+.+.+..+...|+.. ...+.+..+++...+..+|.+|..+.
T Consensus      1026 ~e~l-~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1026 FEVL-TGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhh-cCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence            9999 8999999999999998888877777654 45678899999999999999997765

>PRK10345 hypothetical protein; Provisional

Probab=99.17  E-value=4.5e-11  Score=88.94  Aligned_cols=68  Identities=13%  Similarity=0.057  Sum_probs=54.2

Q ss_pred             CCCCC--CCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HHhhcCCcccCCCCCCCeeeecC--
Q psy15108         19 GSGKP--RVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGL-EHISDKRLIHKDIAARNCLISSD--   93 (223)
Q Consensus        19 ~v~~~--~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~i~H~di~~~nil~~~~--   93 (223)
                      .|++|  +.+|||.+++++.                .+++.  ..++.+++.++ .|||+++|+||||||.||+++..  
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~----------------~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~  143 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQC----------------RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISE  143 (210)
T ss_pred             EEecCCCCcchhHHHHHHcc----------------cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCC
Confidence            46898  6689999999652                25665  35678888887 89999999999999999999743  


Q ss_pred             --CCeEEcCCCCC
Q psy15108         94 --LSVKISLSGLS  104 (223)
Q Consensus        94 --~~~~l~df~~~  104 (223)
                        ..++++|++.+
T Consensus       144 ~~~~~~LiDg~G~  156 (210)
T PRK10345        144 SEVIPVVCDNIGE  156 (210)
T ss_pred             CCCcEEEEECCCC
Confidence              37999995434

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.17  E-value=4.5e-11  Score=90.99  Aligned_cols=68  Identities=19%  Similarity=0.083  Sum_probs=57.9

Q ss_pred             CCCCCCCC-CChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         19 GSGKPRVK-GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        19 ~v~~~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      +|++++++ .+|.+++..                ..+++..    +.+++.++.+||+.|++|+|++|.||+++.++.++
T Consensus       123 lV~e~l~G~~~L~~~l~~----------------~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~  182 (239)
T PRK01723        123 ILIERIEGARDLVALLQE----------------APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFW  182 (239)
T ss_pred             EEEEecCCCCCHHHHHhc----------------CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEE
Confidence            78899997 689999853                2355543    56899999999999999999999999999888999


Q ss_pred             EcCCCCCcc
Q psy15108         98 ISLSGLSKD  106 (223)
Q Consensus        98 l~df~~~~~  106 (223)
                      ++|||.+..
T Consensus       183 LIDfg~~~~  191 (239)
T PRK01723        183 LIDFDRGEL  191 (239)
T ss_pred             EEECCCccc
Confidence            999998864

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.14  E-value=1e-10  Score=87.38  Aligned_cols=70  Identities=13%  Similarity=0.110  Sum_probs=61.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||++|++|.+++..                  ... ....++.+++.++.++|+.+++|+|++|.||+++ .+.+
T Consensus        74 ~~lv~e~~~G~~L~~~~~~------------------~~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~  133 (211)
T PRK14879         74 FIIVMEYIEGEPLKDLINS------------------NGM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKI  133 (211)
T ss_pred             CEEEEEEeCCcCHHHHHHh------------------ccH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCE
Confidence            3478999999999999863                  122 8889999999999999999999999999999999 7889


Q ss_pred             EEcCCCCCcc
Q psy15108         97 KISLSGLSKD  106 (223)
Q Consensus        97 ~l~df~~~~~  106 (223)
                      +++|||.+..
T Consensus       134 ~liDf~~a~~  143 (211)
T PRK14879        134 YLIDFGLAEF  143 (211)
T ss_pred             EEEECCcccC
Confidence            9999998863

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.11  E-value=5.8e-11  Score=88.01  Aligned_cols=71  Identities=13%  Similarity=0.014  Sum_probs=60.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||+.+++|.++..                     ......++.++++++.++|+.|++|+|++|.||+++.++.+
T Consensus       106 ~~lv~e~~~g~~L~~~~~---------------------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~  164 (198)
T cd05144         106 HAVVMEYIDGVELYRVRV---------------------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKI  164 (198)
T ss_pred             ceEEEEEeCCcchhhccc---------------------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcE
Confidence            347899999999876542                     02345788999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccc
Q psy15108         97 KISLSGLSKDTY  108 (223)
Q Consensus        97 ~l~df~~~~~~~  108 (223)
                      +++|||.+....
T Consensus       165 ~liDfg~~~~~~  176 (198)
T cd05144         165 YIIDWPQMVSTD  176 (198)
T ss_pred             EEEECCccccCC
Confidence            999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=99.05  E-value=6.2e-09  Score=83.19  Aligned_cols=163  Identities=17%  Similarity=0.164  Sum_probs=116.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccc
Q psy15108         52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF  131 (223)
Q Consensus        52 ~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  131 (223)
                      ....++.+++++.+++.+..-||..|..-+|+.++|+|+..++.+.+.|-.-....  .......+.++...|++||...
T Consensus       112 P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~--~ng~~~~cpVg~~eftPPElQ~  189 (637)
T COG4248         112 PHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN--ANGTLHLCPVGVSEFTPPELQT  189 (637)
T ss_pred             CccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeec--cCCceEecccCccccCCHHHhc
Confidence            35789999999999999999999999999999999999999999998875432211  1122345667788999999865


Q ss_pred             -----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH----HHH-HHHh---------Cc-ccC-CC---CCCChHH
Q psy15108        132 -----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ----VLS-QLES---------KK-LCW-KH---SSKTPEY  187 (223)
Q Consensus       132 -----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~----~~~-~~~~---------~~-~~~-~~---~~~~~~~  187 (223)
                           +..-+...|.|.+|+++++++..|+.||.+.....    -.+ .|..         +. +.+ +.   ..-+++.
T Consensus       190 ~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~  269 (637)
T COG4248         190 LPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPD  269 (637)
T ss_pred             cccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHH
Confidence                 22346779999999999999878899997653110    000 1111         10 111 11   1234677


Q ss_pred             HHHHHHHhcCC--CCCCCCCHHHHHHHHHHH
Q psy15108        188 ITSLHEKCIHP--HPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       188 ~~~li~~~l~~--dp~~Rps~~~ll~~L~~~  216 (223)
                      +..++.+|+..  .+.-||+.+..+..|..+
T Consensus       270 vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al  300 (637)
T COG4248         270 VQALFQQAFTESGVATPRPTAKAWVAALDAL  300 (637)
T ss_pred             HHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence            88899999875  467899998887777654

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.05  E-value=2.6e-10  Score=84.47  Aligned_cols=67  Identities=15%  Similarity=0.131  Sum_probs=58.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||++|++|.+++... .               .      .++.++++++.++|+.|++|+|++|.||+++ ++.+
T Consensus        72 ~~lv~e~~~g~~l~~~~~~~-~---------------~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~  128 (199)
T TIGR03724        72 KTIVMEYIEGKPLKDVIEEG-N---------------D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKL  128 (199)
T ss_pred             CEEEEEEECCccHHHHHhhc-H---------------H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcE
Confidence            34889999999999988531 1               1      7889999999999999999999999999999 7899


Q ss_pred             EEcCCCCCcc
Q psy15108         97 KISLSGLSKD  106 (223)
Q Consensus        97 ~l~df~~~~~  106 (223)
                      +++|||++..
T Consensus       129 ~liDfg~a~~  138 (199)
T TIGR03724       129 YLIDFGLGKY  138 (199)
T ss_pred             EEEECCCCcC
Confidence            9999998864

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.02  E-value=3.2e-10  Score=96.28  Aligned_cols=66  Identities=20%  Similarity=0.173  Sum_probs=58.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++++|.+++.                       ....++.++++++.+||+.+++|||+||.||++ .++.+
T Consensus       411 ~~lv~E~~~g~~L~~~l~-----------------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~  466 (535)
T PRK09605        411 KTIVMEYIGGKDLKDVLE-----------------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRL  466 (535)
T ss_pred             CEEEEEecCCCcHHHHHH-----------------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcE
Confidence            448899999999999884                       235688999999999999999999999999999 57789


Q ss_pred             EEcCCCCCcc
Q psy15108         97 KISLSGLSKD  106 (223)
Q Consensus        97 ~l~df~~~~~  106 (223)
                      +++|||+++.
T Consensus       467 ~liDFGla~~  476 (535)
T PRK09605        467 YLIDFGLGKY  476 (535)
T ss_pred             EEEeCccccc
Confidence            9999999864

>KOG2137|consensus

Probab=98.96  E-value=3.8e-10  Score=94.54  Aligned_cols=150  Identities=17%  Similarity=0.214  Sum_probs=105.4

Q ss_pred             HHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhh--------cCCcccccccccccc
Q psy15108         61 TMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR--------NAILPLRWLPYEAVF  131 (223)
Q Consensus        61 ~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~--------~~~~~~~~~~pe~~~  131 (223)
                      .=+.+.+.|+.++|.. +++|++|.|++|.++.++..|+..|+++........+...        .......|.+||.+.
T Consensus       103 ~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  103 ANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hhhhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            3345666899999976 8999999999999999999999999987654332111110        112224589999998


Q ss_pred             cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH--HHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHH
Q psy15108        132 DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ--LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI  209 (223)
Q Consensus       132 ~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  209 (223)
                      ....+.++|++|+|+++|.+...|+.-+...........  ............++|.++++-+.+++..++..||++.++
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l  262 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLL  262 (700)
T ss_pred             cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhh
Confidence            877889999999999999887455544433322211111  111112233346789999999999999999999977665


Q ss_pred             H
Q psy15108        210 V  210 (223)
Q Consensus       210 l  210 (223)
                      .
T Consensus       263 ~  263 (700)
T KOG2137|consen  263 L  263 (700)
T ss_pred             h
Confidence            4

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.94  E-value=8.1e-10  Score=80.98  Aligned_cols=72  Identities=15%  Similarity=0.048  Sum_probs=57.3

Q ss_pred             CCCCCCCCCCChHH-HHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCC
Q psy15108         18 SGSGKPRVKGDLKQ-FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        18 ~~v~~~~~~g~L~~-~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~   95 (223)
                      .++++|+.++++.. .+... .               .. ..+..++.+++.++.++|. .+++|+|++|.||+++ ++.
T Consensus        91 ~lv~e~~~g~~~~~~~l~~~-~---------------~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~  152 (187)
T cd05119          91 VLVMEFIGGDGIPAPRLKDV-R---------------LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGK  152 (187)
T ss_pred             EEEEEEeCCCCccChhhhhh-h---------------hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCc
Confidence            37889999865432 22211 0               11 6778999999999999999 9999999999999999 889


Q ss_pred             eEEcCCCCCccc
Q psy15108         96 VKISLSGLSKDT  107 (223)
Q Consensus        96 ~~l~df~~~~~~  107 (223)
                      ++++|||.+...
T Consensus       153 ~~liDfg~a~~~  164 (187)
T cd05119         153 VYIIDVPQAVEI  164 (187)
T ss_pred             EEEEECcccccc
Confidence            999999998644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0601|consensus

Probab=98.91  E-value=9e-10  Score=90.74  Aligned_cols=176  Identities=15%  Similarity=0.125  Sum_probs=124.7

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHH----HHHHhhcCCcccCCCCCCCeeeecC-
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVAL----GLEHISDKRLIHKDIAARNCLISSD-   93 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~i~H~di~~~nil~~~~-   93 (223)
                      .+....++.+|+++.+....              -+++..++..+.+...    |+.++|..+++|.|++|.||++..+ 
T Consensus       194 fiqtE~~~~sl~~~~~~~~~--------------~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~  259 (524)
T KOG0601|consen  194 FIQTELCGESLQSYCHTPCN--------------FLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDW  259 (524)
T ss_pred             eeeeccccchhHHhhhcccc--------------cCCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccccc
Confidence            55666777899999886433              4777888888888888    9999999999999999999999999 


Q ss_pred             CCeEEcCCCCCcccchhhhh----hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCC-CCCCHHHHH
Q psy15108         94 LSVKISLSGLSKDTYQKEYY----KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF-PDLSDDQVL  168 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~-~~~~~~~~~  168 (223)
                      ..++++||++.........-    ......+...|++||... .-++...|++++|.++.+.. .+..+. .+.+.  .+
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~-l~~~~~~~g~~~--~W  335 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAI-LGSHLPSVGKNS--SW  335 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhH-hhcccccCCCCC--Cc
Confidence            78899999988765544311    111225567799999874 44578899999999988876 343332 22111  11


Q ss_pred             HHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .++.......+.....+.++...+..|+..++..|++.+.+..+
T Consensus       336 ~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l  379 (524)
T KOG0601|consen  336 SQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL  379 (524)
T ss_pred             cccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence            11222212333344455666778889999999999999887654

>KOG0601|consensus

Probab=98.80  E-value=4.9e-09  Score=86.47  Aligned_cols=171  Identities=15%  Similarity=0.105  Sum_probs=117.3

Q ss_pred             CCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC-CCeEE
Q psy15108         20 SGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVKI   98 (223)
Q Consensus        20 v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~-~~~~l   98 (223)
                      --|||.++++...+...               ..+++...+++..|++.++.++|+..++|+|++|.||++..+ +..++
T Consensus       344 p~e~~~~~s~~l~~~~~---------------~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~  408 (524)
T KOG0601|consen  344 PLEFCEGGSSSLRSVTS---------------QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKL  408 (524)
T ss_pred             chhhhcCcchhhhhHHH---------------HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhc
Confidence            34788898877666332               358999999999999999999999999999999999999876 67789


Q ss_pred             cCCCCCcccchhhhhhhhcCCccccc-ccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRW-LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~-~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      .||+.+....-..   .........| .++.......+..++|++++|..+.+.++....++.......    +..+  .
T Consensus       409 ~~~~~~t~~~~~~---~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~----i~~~--~  479 (524)
T KOG0601|consen  409 GDFGCWTRLAFSS---GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLT----IRSG--D  479 (524)
T ss_pred             cccccccccceec---ccccccccccccchhhccccccccccccccccccccccccCcccCccccccee----eecc--c
Confidence            9998775321110   0011112223 345555566678899999999999998844444444322211    1121  1


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      .+.......++..+.+.+...++..||.+.++..+..
T Consensus       480 ~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~  516 (524)
T KOG0601|consen  480 TPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSE  516 (524)
T ss_pred             ccCCCchHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence            2223344466777888889999999999888766543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.76  E-value=1e-08  Score=75.16  Aligned_cols=74  Identities=18%  Similarity=0.092  Sum_probs=57.9

Q ss_pred             CCCCCCCCCCCChH-HHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCcccCCCCCCCeeeecCC
Q psy15108         17 KSGSGKPRVKGDLK-QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~i~H~di~~~nil~~~~~   94 (223)
                      ..+||||..++.+. ..+++                ..++.++...+..+++.++..+ |+.|++|+|+++.||++. ++
T Consensus        99 ~~lvME~Ig~~~~~~~~Lkd----------------~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~  161 (197)
T cd05146          99 HVLVMSFIGDDQVPAPKLKD----------------AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DG  161 (197)
T ss_pred             CEEEEEEcCCCCccchhhhc----------------cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CC
Confidence            33889999876542 23322                1356667788899999999998 899999999999999997 46


Q ss_pred             CeEEcCCCCCccc
Q psy15108         95 SVKISLSGLSKDT  107 (223)
Q Consensus        95 ~~~l~df~~~~~~  107 (223)
                      .+.++||+.+...
T Consensus       162 ~v~iIDF~qav~~  174 (197)
T cd05146         162 KVWFIDVSQSVEP  174 (197)
T ss_pred             cEEEEECCCceeC
Confidence            7999999988654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.71  E-value=4e-08  Score=75.87  Aligned_cols=74  Identities=11%  Similarity=0.051  Sum_probs=62.2

Q ss_pred             CCCCCCCCC-ChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec-----
Q psy15108         19 GSGKPRVKG-DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-----   92 (223)
Q Consensus        19 ~v~~~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~-----   92 (223)
                      +|+|++++. +|.+++.....             .+.+......++.+++..+.-||..|++|+|+++.||+++.     
T Consensus       112 LVte~l~~~~sL~~~~~~~~~-------------~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~  178 (268)
T PRK15123        112 IITEDLAPTISLEDYCADWAT-------------NPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGR  178 (268)
T ss_pred             EEEeeCCCCccHHHHHHhhcc-------------cCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCC
Confidence            788999886 89999864321             23567788899999999999999999999999999999985     


Q ss_pred             --CCCeEEcCCCCCc
Q psy15108         93 --DLSVKISLSGLSK  105 (223)
Q Consensus        93 --~~~~~l~df~~~~  105 (223)
                        ...+.++||+.+.
T Consensus       179 ~~~~~~~LIDl~r~~  193 (268)
T PRK15123        179 EEDLKLSVIDLHRAQ  193 (268)
T ss_pred             CCCceEEEEECCccc
Confidence              3568999999774

>KOG3087|consensus

Probab=98.66  E-value=5.6e-08  Score=69.56  Aligned_cols=81  Identities=21%  Similarity=0.201  Sum_probs=63.8

Q ss_pred             CCCCCCCCCCCCCC-CChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee
Q psy15108         13 DSKDKSGSGKPRVK-GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS   91 (223)
Q Consensus        13 ~~~~~~~v~~~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~   91 (223)
                      +.+...++|||.++ .++.+++.....             ..........++..|-+.+.-||..+++|+|+.++||++.
T Consensus        81 D~~~~~i~ME~~~g~~~vk~~i~~~~~-------------~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~  147 (229)
T KOG3087|consen   81 DTYGGQIYMEFIDGASTVKDFILSTME-------------DESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLR  147 (229)
T ss_pred             ecCCCeEEEEeccchhHHHHHHHHHcc-------------CcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEe
Confidence            34555688999987 579999987654             2233444478889999999999999999999999999987


Q ss_pred             cCCC---eEEcCCCCCcc
Q psy15108         92 SDLS---VKISLSGLSKD  106 (223)
Q Consensus        92 ~~~~---~~l~df~~~~~  106 (223)
                      ..+.   +.++|||++..
T Consensus       148 ~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  148 SDGNQITPILIDFGLSSV  165 (229)
T ss_pred             cCCCcCceEEEeecchhc
Confidence            6643   58999999853

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.66  E-value=3.1e-08  Score=81.94  Aligned_cols=75  Identities=13%  Similarity=0.032  Sum_probs=59.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHH-HHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVAL-GLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~-~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      -+||||++|++|.++......              .++   ...++..++. .+..+|..|++|+|++|.||+++.++.+
T Consensus       234 vLvmE~i~G~~L~~~~~~~~~--------------~~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i  296 (437)
T TIGR01982       234 VLTMEWIDGIPLSDIAALDEA--------------GLD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKI  296 (437)
T ss_pred             eEEEEeECCcccccHHHHHhc--------------CCC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcE
Confidence            389999999999998764321              122   3445666665 4678899999999999999999999999


Q ss_pred             EEcCCCCCcccch
Q psy15108         97 KISLSGLSKDTYQ  109 (223)
Q Consensus        97 ~l~df~~~~~~~~  109 (223)
                      +++|||++.....
T Consensus       297 ~liDfG~~~~l~~  309 (437)
T TIGR01982       297 IALDFGIVGRLSE  309 (437)
T ss_pred             EEEeCCCeeECCH
Confidence            9999999876654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG3741|consensus

Probab=98.65  E-value=7.5e-07  Score=73.11  Aligned_cols=171  Identities=11%  Similarity=0.063  Sum_probs=123.0

Q ss_pred             CCCCCCCCCC-CChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVK-GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      .-+|++|++. ++|.++--.+.......+..-...+...+++.+|.++.|+..||.++|+.|+.-+-+.+.+|+++++-+
T Consensus       352 lvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~R  431 (655)
T KOG3741|consen  352 LVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMR  431 (655)
T ss_pred             EEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcce
Confidence            3378899987 789999887776665555555667778999999999999999999999999999999999999999888


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCC-CCCCCCHHHH-HHHHHh
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEM-PFPDLSDDQV-LSQLES  173 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~-p~~~~~~~~~-~~~~~~  173 (223)
                      +++...|+........             .+|  +.   -..+.|.-.||.++..+. +|.. .+......+. ...+  
T Consensus       432 IriS~C~i~Dvl~~d~-------------~~~--le---~~Qq~D~~~lG~ll~aLA-t~~~ns~~~d~~~~s~~~~I--  490 (655)
T KOG3741|consen  432 IRISGCGIMDVLQEDP-------------TEP--LE---SQQQNDLRDLGLLLLALA-TGTENSNRTDSTQSSHLTRI--  490 (655)
T ss_pred             EEEecccceeeecCCC-------------Ccc--hh---HHhhhhHHHHHHHHHHHh-hcccccccccchHHHHHHHh--
Confidence            8888777654322111             111  11   123578889999999998 5543 3333332222 2222  


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                             ....+.++++++.......+++ -++.+++.++-.-
T Consensus       491 -------~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~~~~  525 (655)
T KOG3741|consen  491 -------TTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMIGSR  525 (655)
T ss_pred             -------hhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHHHHH
Confidence                   2245677888888888888876 7888888776543

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.61  E-value=6.9e-08  Score=69.18  Aligned_cols=67  Identities=15%  Similarity=0.073  Sum_probs=55.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++|||.+|-.|.+++...                      ...++..+-.-+.-||..||+|+|+.++||++... .+
T Consensus        74 ~~I~me~I~G~~lkd~l~~~----------------------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~-~i  130 (204)
T COG3642          74 GLIVMEYIEGELLKDALEEA----------------------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG-RI  130 (204)
T ss_pred             CEEEEEEeCChhHHHHHHhc----------------------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC-cE
Confidence            44889999999999999641                      24555666667778999999999999999999766 49


Q ss_pred             EEcCCCCCcc
Q psy15108         97 KISLSGLSKD  106 (223)
Q Consensus        97 ~l~df~~~~~  106 (223)
                      .++|||++..
T Consensus       131 ~~IDfGLg~~  140 (204)
T COG3642         131 YFIDFGLGEF  140 (204)
T ss_pred             EEEECCcccc
Confidence            9999999863

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.60  E-value=1e-07  Score=71.06  Aligned_cols=73  Identities=18%  Similarity=0.136  Sum_probs=62.8

Q ss_pred             CCCCCCCC-CChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC---
Q psy15108         19 GSGKPRVK-GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---   94 (223)
Q Consensus        19 ~v~~~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~---   94 (223)
                      +++|++++ .+|.+++.....               .+......++.+++..+.-||+.|++|+|+++.|||++...   
T Consensus        94 lite~l~~~~~L~~~~~~~~~---------------~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~  158 (206)
T PF06293_consen   94 LITEALPGAQDLRDLLQQWEQ---------------LDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQY  158 (206)
T ss_pred             EEEEeCCCcccHHHHHHhhcc---------------cchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCce
Confidence            56788887 489999986432               67778889999999999999999999999999999999887   


Q ss_pred             CeEEcCCCCCcc
Q psy15108         95 SVKISLSGLSKD  106 (223)
Q Consensus        95 ~~~l~df~~~~~  106 (223)
                      .+.++||+-+..
T Consensus       159 ~~~lIDld~~~~  170 (206)
T PF06293_consen  159 RFYLIDLDRMRF  170 (206)
T ss_pred             eEEEEcchhcee
Confidence            789999987653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.50  E-value=1.1e-07  Score=66.69  Aligned_cols=51  Identities=20%  Similarity=0.121  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhcC---CcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         56 TSQAVTMAYQVALGLEHISDK---RLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        56 ~~~~~~i~~~i~~~l~~LH~~---~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      ......++.++++++..+|..   +++|+|++|.||+++..+.+++.||+.+..
T Consensus        85 ~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          85 EEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            456677889999999999985   699999999999999988999999998753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1243|consensus

Probab=98.40  E-value=4.7e-06  Score=70.36  Aligned_cols=98  Identities=18%  Similarity=0.245  Sum_probs=68.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhh-cCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCccccccccccccc
Q psy15108         54 LSTSQAVTMAYQVALGLEHIS-DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD  132 (223)
Q Consensus        54 l~~~~~~~i~~~i~~~l~~LH-~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  132 (223)
                      ++...+.--++||+.||.+|| +.+++|++|+...|+++..|..++++|..+........ .......-..|..|+.+..
T Consensus       101 l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~  179 (690)
T KOG1243|consen  101 LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDP  179 (690)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCc
Confidence            446677777899999999997 56899999999999999999999999987654322211 0011111122445544322


Q ss_pred             CCCCcccchHHHHHHHHHHHhCC
Q psy15108        133 DEFSTKSDVYAYACLIWEIFNKG  155 (223)
Q Consensus       133 ~~~~~~~Di~slG~il~~l~~~~  155 (223)
                      ..  -..|.|.|||++++++ .|
T Consensus       180 s~--~s~D~~~Lg~li~el~-ng  199 (690)
T KOG1243|consen  180 SE--WSIDSWGLGCLIEELF-NG  199 (690)
T ss_pred             cc--cchhhhhHHHHHHHHh-Cc
Confidence            22  2469999999999998 66

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.29  E-value=2.6e-07  Score=67.53  Aligned_cols=71  Identities=15%  Similarity=0.113  Sum_probs=49.4

Q ss_pred             CCCCCCC--CCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-hhcCCcccCCCCCCCeeeecCCC
Q psy15108         19 GSGKPRV--KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEH-ISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        19 ~v~~~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      +||||..  |..+..+.. .                .++.+....++.+++..+.. +|..|++|+|+++.||+++.+ .
T Consensus        83 ivME~I~~~G~~~~~l~~-~----------------~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~  144 (188)
T PF01163_consen   83 IVMEYIGEDGVPLPRLKD-V----------------DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-K  144 (188)
T ss_dssp             EEEE--EETTEEGGCHHH-C----------------GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-C
T ss_pred             EEEEecCCCccchhhHHh-c----------------cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-e
Confidence            8899999  555655443 2                12345666777888886555 579999999999999999887 9


Q ss_pred             eEEcCCCCCccc
Q psy15108         96 VKISLSGLSKDT  107 (223)
Q Consensus        96 ~~l~df~~~~~~  107 (223)
                      +.++||+.+...
T Consensus       145 ~~iIDf~qav~~  156 (188)
T PF01163_consen  145 VYIIDFGQAVDS  156 (188)
T ss_dssp             EEE--GTTEEET
T ss_pred             EEEEecCcceec
Confidence            999999987643

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.26  E-value=5.5e-07  Score=75.85  Aligned_cols=73  Identities=14%  Similarity=0.034  Sum_probs=52.4

Q ss_pred             CCCCCCCCCChHHHH--HHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC--
Q psy15108         19 GSGKPRVKGDLKQFL--LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL--   94 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l--~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~--   94 (223)
                      +||||+.|+.+.++-  ...+.           ....+.+..+..++.|+       ...|++|+|++|.||+++.++  
T Consensus       238 LvmE~i~G~~l~d~~~l~~~g~-----------d~~~la~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~  299 (537)
T PRK04750        238 MVMERMYGIPVSDVAALRAAGT-----------DMKLLAERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDPPE  299 (537)
T ss_pred             EEEeeecCccHHhHHHHHhcCC-----------CHHHHHHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCCCC
Confidence            899999999998753  32221           00124444444444444       458999999999999999887  


Q ss_pred             --CeEEcCCCCCcccch
Q psy15108         95 --SVKISLSGLSKDTYQ  109 (223)
Q Consensus        95 --~~~l~df~~~~~~~~  109 (223)
                        .++++|||+......
T Consensus       300 ~~~i~llDFGivg~l~~  316 (537)
T PRK04750        300 NPRYIALDFGIVGSLNK  316 (537)
T ss_pred             CCeEEEEecceEEECCH
Confidence              899999999876544

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.18  E-value=1.6e-06  Score=64.34  Aligned_cols=64  Identities=13%  Similarity=0.112  Sum_probs=51.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++|||++|-.|.++..                   +++.    +...+.+++.-+|+.|++|+|..|.|+++..+ .+++
T Consensus       120 ll~EYIeG~~l~d~~~-------------------i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~i  175 (229)
T PF06176_consen  120 LLMEYIEGVELNDIED-------------------IDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRI  175 (229)
T ss_pred             EEEEEecCeecccchh-------------------cCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEE
Confidence            6899999999887753                   4442    44567788999999999999999999998854 5999


Q ss_pred             cCCCCCcc
Q psy15108         99 SLSGLSKD  106 (223)
Q Consensus        99 ~df~~~~~  106 (223)
                      +|++..+.
T Consensus       176 ID~~~k~~  183 (229)
T PF06176_consen  176 IDTQGKRM  183 (229)
T ss_pred             EECccccc
Confidence            99987653

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK09902 hypothetical protein; Provisional

Probab=98.15  E-value=6.3e-06  Score=60.95  Aligned_cols=75  Identities=11%  Similarity=0.011  Sum_probs=60.4

Q ss_pred             CCCCCCCC-CChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC--
Q psy15108         19 GSGKPRVK-GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--   95 (223)
Q Consensus        19 ~v~~~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~--   95 (223)
                      +|.|-+.+ .||.+++.+...             .+.+......++.++++.+.-||+.|+.|+|+.+.||+++..+.  
T Consensus       102 LVTe~L~g~~~L~~~l~~~~~-------------~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~  168 (216)
T PRK09902        102 LVTEDMAGFISIADWYAQHAV-------------SPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAE  168 (216)
T ss_pred             EEEEeCCCCccHHHHHhcCCc-------------CCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCee
Confidence            34454544 678888865322             34678888899999999999999999999999999999986666  


Q ss_pred             eEEcCCCCCcc
Q psy15108         96 VKISLSGLSKD  106 (223)
Q Consensus        96 ~~l~df~~~~~  106 (223)
                      +.++||.-++.
T Consensus       169 v~lIDlEk~r~  179 (216)
T PRK09902        169 AGFLDLEKSRR  179 (216)
T ss_pred             EEEEEhhccch
Confidence            89999987654

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.10  E-value=6.1e-06  Score=59.28  Aligned_cols=45  Identities=18%  Similarity=0.123  Sum_probs=39.0

Q ss_pred             HHHHHHHHHHHHhhcCCc-----ccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         61 TMAYQVALGLEHISDKRL-----IHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        61 ~i~~~i~~~l~~LH~~~i-----~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      .++.++++++..||+.++     +|+|+++.||+++ ++.++++||+.+..
T Consensus        87 ~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          87 ENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             HHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            346789999999999885     9999999999998 66899999998753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.83  E-value=1.9e-05  Score=60.22  Aligned_cols=70  Identities=10%  Similarity=0.057  Sum_probs=55.1

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ...+|||+.+|-.|...-                    ++.+....++..|++-+...-..|++|+|+++-||+++.+|.
T Consensus       181 RHaVvMe~ieG~eL~~~r--------------------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~  240 (304)
T COG0478         181 RHAVVMEYIEGVELYRLR--------------------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD  240 (304)
T ss_pred             cceeeeehcccceeeccc--------------------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence            344899999986665433                    345566667777777777777999999999999999999999


Q ss_pred             eEEcCCCCCc
Q psy15108         96 VKISLSGLSK  105 (223)
Q Consensus        96 ~~l~df~~~~  105 (223)
                      +.++||=-+.
T Consensus       241 ~~vIDwPQ~v  250 (304)
T COG0478         241 IVVIDWPQAV  250 (304)
T ss_pred             EEEEeCcccc
Confidence            9999985443

>KOG1035|consensus

Probab=97.50  E-value=0.00058  Score=61.72  Aligned_cols=167  Identities=14%  Similarity=0.107  Sum_probs=104.6

Q ss_pred             CCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCC---CeeeecCCCeE
Q psy15108         21 GKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR---NCLISSDLSVK   97 (223)
Q Consensus        21 ~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~---nil~~~~~~~~   97 (223)
                      .++|.+-++...+..-+               .++.+.++.+..++.+|+.++|+....|.-+...   +-..+..+.+.
T Consensus       265 ~~~~s~~~~~~~~q~v~---------------~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~  329 (1351)
T KOG1035|consen  265 QEICSKVELRSLLQSVG---------------SIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVA  329 (1351)
T ss_pred             HhhcCccchHHHHhhcc---------------ccCHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceee
Confidence            46777777777776543               4899999999999999999999986655555444   33334445555


Q ss_pred             Ec--CCCCCcccchhhhhhhhcCCcccccccccccccCCCC--cccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         98 IS--LSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFS--TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        98 l~--df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~--~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      ..  ||+.+.........  .....+..+.+++........  ...|+|.+|.....+..+...+-.......    +. 
T Consensus       330 ~sl~~~~ss~~l~d~~~~--~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~~~----~l-  402 (1351)
T KOG1035|consen  330 ISLSDFDSSKPLPDNEKS--FSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAVPVS----LL-  402 (1351)
T ss_pred             cchhhhcccccCCCcccc--hhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccccchhh----hh-
Confidence            55  77766654433211  112223335566665544443  447999999988877632222222111111    10 


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                             +.....+..+...+|+..++++|++..+++.+...-
T Consensus       403 -------~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~  438 (1351)
T KOG1035|consen  403 -------DVLSTSELLDALPKCLDEDSEERLSALELLTHPFLR  438 (1351)
T ss_pred             -------ccccchhhhhhhhhhcchhhhhccchhhhhhchhcc
Confidence                   111222577788899999999999999999876543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.47  E-value=6.6e-05  Score=56.20  Aligned_cols=31  Identities=23%  Similarity=0.150  Sum_probs=26.1

Q ss_pred             CCcccCCCCCCCeeeec--CCCeEEcCCCCCcc
Q psy15108         76 KRLIHKDIAARNCLISS--DLSVKISLSGLSKD  106 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~--~~~~~l~df~~~~~  106 (223)
                      ..++|+|+.+.||+++.  .+.+.++||+.+..
T Consensus       174 ~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             cEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence            46799999999999998  56678999997753

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.87  E-value=0.002  Score=54.50  Aligned_cols=75  Identities=13%  Similarity=0.058  Sum_probs=54.2

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHH-HHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALG-LEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~-l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      ++|||..|-.+.+.......              .++..   .++..++++ +..+-..|+.|.|.+|.||++..++.+.
T Consensus       243 LtmE~i~Gi~i~d~~~l~~~--------------g~d~k---~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~  305 (517)
T COG0661         243 LTMEWIDGIKISDIAALKSA--------------GIDRK---ELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGRIV  305 (517)
T ss_pred             EEEEeeCCEecccHHHHHhc--------------CCCHH---HHHHHHHHHHHHHHHhcCccccCCCccceEEecCCcEE
Confidence            88999999999988532211              24432   333333333 3445558999999999999999999999


Q ss_pred             EcCCCCCcccchh
Q psy15108         98 ISLSGLSKDTYQK  110 (223)
Q Consensus        98 l~df~~~~~~~~~  110 (223)
                      +.|||+.......
T Consensus       306 ~lDfGi~g~l~~~  318 (517)
T COG0661         306 LLDFGIVGRLDPK  318 (517)
T ss_pred             EEcCcceecCCHH
Confidence            9999998765543

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.84  E-value=0.0011  Score=48.59  Aligned_cols=53  Identities=17%  Similarity=0.023  Sum_probs=47.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhc---CCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         54 LSTSQAVTMAYQVALGLEHISD---KRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        54 l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      -++..+.+++.++++.+.+++.   ..+.-+|++++|+-++.++.++++|......
T Consensus        56 ~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   56 SPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcch
Confidence            6899999999999999999987   4567799999999999999999999986643

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1235|consensus

Probab=96.51  E-value=0.0062  Score=51.57  Aligned_cols=75  Identities=16%  Similarity=0.118  Sum_probs=52.3

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec----CC
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS----DL   94 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~----~~   94 (223)
                      ++|||++|.-+.|.-.-..              ..++...+..-+.+..  .+.+-..|++|+|-.|.||++.+    +.
T Consensus       279 LtME~~~G~~i~Dl~~i~~--------------~gi~~~~i~~~l~~~~--~~qIf~~GffHaDPHPGNilv~~~~~~~~  342 (538)
T KOG1235|consen  279 LTMEYVDGIKINDLDAIDK--------------RGISPHDILNKLVEAY--LEQIFKTGFFHADPHPGNILVRPNPEGDE  342 (538)
T ss_pred             EEEEecCCccCCCHHHHHH--------------cCCCHHHHHHHHHHHH--HHHHHhcCCccCCCCCCcEEEecCCCCCc
Confidence            8899999988776643222              2466665444433332  23445678999999999999984    56


Q ss_pred             CeEEcCCCCCcccch
Q psy15108         95 SVKISLSGLSKDTYQ  109 (223)
Q Consensus        95 ~~~l~df~~~~~~~~  109 (223)
                      .+.+.|+|+......
T Consensus       343 ~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  343 EIVLLDHGLYAVISH  357 (538)
T ss_pred             cEEEEcccccccccH
Confidence            789999999875543

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.43  E-value=0.0077  Score=45.80  Aligned_cols=53  Identities=19%  Similarity=0.149  Sum_probs=45.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCCeEEcCCCCCccc
Q psy15108         54 LSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDT  107 (223)
Q Consensus        54 l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~~~l~df~~~~~~  107 (223)
                      +...+...+..++++.+.-|-. .+++|+|++.-|||+. .+.+.++|++-+...
T Consensus       163 ~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~  216 (268)
T COG1718         163 LELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTI  216 (268)
T ss_pred             cCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEEEEECcccccc
Confidence            4444688888999999998877 8999999999999999 779999999977643

>KOG1826|consensus

Probab=96.07  E-value=0.00077  Score=62.91  Aligned_cols=128  Identities=14%  Similarity=0.074  Sum_probs=91.8

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----CcccCCCCCCCeeeecC
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-----RLIHKDIAARNCLISSD   93 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~i~H~di~~~nil~~~~   93 (223)
                      ..++|+.+|++.+.|-+--.           +...+...-+.....+.+.+..-+|+.     -.+|+++++.|.++..+
T Consensus      1308 ~r~~~~~~g~~f~iIikg~e-----------e~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtn 1376 (2724)
T KOG1826|consen 1308 IRSLYVEFGKLFSIIIKGLE-----------ESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTN 1376 (2724)
T ss_pred             HHHHHHHHhHHHHHHHhccc-----------cCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecC
Confidence            56788999999998865322           344555555555444446665665543     35899999999999999


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCC
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF  159 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~  159 (223)
                      -.+++.++|+.+.... .....+...+++.|+.++..+.-+++.++|+|..|+.+|... .+..+|
T Consensus      1377 y~v~~gk~gLdKIknp-~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs-~~n~~f 1440 (2724)
T KOG1826|consen 1377 YNVKLGKGGLDKIKNP-VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRS-DGNAYF 1440 (2724)
T ss_pred             CcccccccccccccCc-hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh-cccHHH
Confidence            9999999999972211 122345567778888888887777888899999999999876 555444

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=95.82  E-value=0.032  Score=42.25  Aligned_cols=28  Identities=18%  Similarity=0.000  Sum_probs=24.9

Q ss_pred             CcccCCCCCCCeeeecCCCeEEcCCCCCc
Q psy15108         77 RLIHKDIAARNCLISSDLSVKISLSGLSK  105 (223)
Q Consensus        77 ~i~H~di~~~nil~~~~~~~~l~df~~~~  105 (223)
                      .++|+|+.|.||+++..+ +.++||+.+.
T Consensus       154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            568999999999999877 9999999775

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=94.88  E-value=0.05  Score=41.17  Aligned_cols=30  Identities=20%  Similarity=0.165  Sum_probs=26.2

Q ss_pred             CCcccCCCCCCCeeeec-CCCeEEcCCCCCc
Q psy15108         76 KRLIHKDIAARNCLISS-DLSVKISLSGLSK  105 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~-~~~~~l~df~~~~  105 (223)
                      .+++|+|+.+.||+++. ++.+.++||..+.
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            46899999999999998 5779999998774

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=94.65  E-value=0.07  Score=42.29  Aligned_cols=30  Identities=20%  Similarity=0.197  Sum_probs=26.8

Q ss_pred             CCcccCCCCCCCeeeecCCCeEEcCCCCCc
Q psy15108         76 KRLIHKDIAARNCLISSDLSVKISLSGLSK  105 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~~~~l~df~~~~  105 (223)
                      .+++|+|+.+.|++++.++.+.++||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            689999999999999988767899999774

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=94.64  E-value=0.045  Score=41.54  Aligned_cols=31  Identities=19%  Similarity=0.131  Sum_probs=25.6

Q ss_pred             cCCcccCCCCCCCeeeecCCCeEEcCCCCCc
Q psy15108         75 DKRLIHKDIAARNCLISSDLSVKISLSGLSK  105 (223)
Q Consensus        75 ~~~i~H~di~~~nil~~~~~~~~l~df~~~~  105 (223)
                      ..+++|+|+.+.|++++.....-++||+.+.
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            3468999999999999876555799999774

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK05231 homoserine kinase; Provisional

Probab=94.17  E-value=0.13  Score=40.84  Aligned_cols=31  Identities=19%  Similarity=0.174  Sum_probs=26.3

Q ss_pred             CCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         76 KRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      .+++|+|+.+.||+++.+...-++||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence            4899999999999999765568999998753

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=94.17  E-value=0.12  Score=40.97  Aligned_cols=29  Identities=21%  Similarity=0.212  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCeeeecCCCeEEcCCCCCc
Q psy15108         76 KRLIHKDIAARNCLISSDLSVKISLSGLSK  105 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~~~~l~df~~~~  105 (223)
                      .+++|+|+.+.||+++. +.+.++||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            57899999999999987 678899999664

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=94.05  E-value=0.052  Score=40.66  Aligned_cols=31  Identities=29%  Similarity=0.225  Sum_probs=21.0

Q ss_pred             cCCcccCCCCCCCeeee-cCCCeEEcCCCCCc
Q psy15108         75 DKRLIHKDIAARNCLIS-SDLSVKISLSGLSK  105 (223)
Q Consensus        75 ~~~i~H~di~~~nil~~-~~~~~~l~df~~~~  105 (223)
                      ...++|+|+.+.||+++ .++.+-++||+.+.
T Consensus       165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             CcEEEEeccccccceeeeccceeEEEecccce
Confidence            35799999999999999 55556799998775

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=93.97  E-value=0.11  Score=40.92  Aligned_cols=30  Identities=13%  Similarity=0.120  Sum_probs=26.3

Q ss_pred             CCcccCCCCCCCeeeecC----CCeEEcCCCCCc
Q psy15108         76 KRLIHKDIAARNCLISSD----LSVKISLSGLSK  105 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~----~~~~l~df~~~~  105 (223)
                      .+++|+|+.+.||+++.+    +.+.++||..+.
T Consensus       179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            368999999999999874    789999999875

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=93.97  E-value=0.099  Score=41.08  Aligned_cols=31  Identities=19%  Similarity=0.170  Sum_probs=26.9

Q ss_pred             CCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         76 KRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      .+++|+|+.|.|++++.++.+.++||+.+..
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            4799999999999999877778999987753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG2268|consensus

Probab=93.88  E-value=0.04  Score=43.92  Aligned_cols=63  Identities=14%  Similarity=0.032  Sum_probs=46.2

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +||+...+-.|.+.-+-                     ..+-.+...++.-+--|..+|++|+|..--||+++.+..+++
T Consensus       185 Vvmelv~g~Pl~~v~~v---------------------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~v  243 (465)
T KOG2268|consen  185 VVMELVDGYPLRQVRHV---------------------EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKIVV  243 (465)
T ss_pred             eHHHhhcccceeeeeec---------------------CChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCEEE
Confidence            66777766666554431                     222334455555666788899999999999999999999999


Q ss_pred             cCCC
Q psy15108         99 SLSG  102 (223)
Q Consensus        99 ~df~  102 (223)
                      +||=
T Consensus       244 IDFP  247 (465)
T KOG2268|consen  244 IDFP  247 (465)
T ss_pred             eech
Confidence            9994

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=93.82  E-value=0.058  Score=40.60  Aligned_cols=37  Identities=14%  Similarity=0.048  Sum_probs=32.0

Q ss_pred             HHHHHHhhc--CCcccCCCCCCCeeeecCCCeEEcCCCC
Q psy15108         67 ALGLEHISD--KRLIHKDIAARNCLISSDLSVKISLSGL  103 (223)
Q Consensus        67 ~~~l~~LH~--~~i~H~di~~~nil~~~~~~~~l~df~~  103 (223)
                      +++|...|+  .+.+|+|..|+|||-++.|.+|+.|.+.
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhh
Confidence            566778884  4789999999999999999999999763

The function of this family is unknown.

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=93.38  E-value=0.24  Score=38.60  Aligned_cols=52  Identities=12%  Similarity=0.054  Sum_probs=40.6

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcC--CcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         55 STSQAVTMAYQVALGLEHISDK--RLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        55 ~~~~~~~i~~~i~~~l~~LH~~--~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      +...+.+.+..+-.++.-.+..  -++|+|+.+.|++.+..+.+.++||.-|..
T Consensus       130 ~~~~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~  183 (269)
T COG0510         130 DNHLLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGL  183 (269)
T ss_pred             hhHHHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCCC
Confidence            4444555666666677666665  689999999999999989999999987753

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=93.17  E-value=0.17  Score=41.05  Aligned_cols=52  Identities=17%  Similarity=0.213  Sum_probs=45.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         54 LSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        54 l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      -..+++..++++.+..+.-+... .+-||++.-.||+++ .|++.++||-+++.
T Consensus       318 ~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         318 DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence            46788899999988877777654 678999999999999 99999999999974

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=92.88  E-value=0.28  Score=36.17  Aligned_cols=30  Identities=30%  Similarity=0.228  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCeeeecCC-----CeEEcCCCCCc
Q psy15108         76 KRLIHKDIAARNCLISSDL-----SVKISLSGLSK  105 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~-----~~~l~df~~~~  105 (223)
                      ..++|||+.+.|+++..++     .+.++||+.+.
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~  154 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH  154 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence            4689999999999997543     58899999875

subfamily of choline kinases

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=92.73  E-value=0.1  Score=39.81  Aligned_cols=30  Identities=13%  Similarity=0.016  Sum_probs=26.2

Q ss_pred             CCcccCCCCCCCeeeecCCCeEEcCCCCCc
Q psy15108         76 KRLIHKDIAARNCLISSDLSVKISLSGLSK  105 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~~~~l~df~~~~  105 (223)
                      ..++|+|+.+.||+++....+.|+||+.+.
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            468999999999999987777899999774

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0576|consensus

Probab=92.62  E-value=0.066  Score=46.22  Aligned_cols=94  Identities=20%  Similarity=0.094  Sum_probs=66.7

Q ss_pred             HHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCc
Q psy15108         58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFST  137 (223)
Q Consensus        58 ~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~  137 (223)
                      +...+...-.++++++|+.--+|+|    ||+... +..+..+|+.........  ..+...++..|++||+.....+..
T Consensus       337 ~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~~t~~~~~~~~~pev~~~~~~~~  409 (829)
T KOG0576|consen  337 QFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KPRTAIGTPEPLAPEVIQENTIDG  409 (829)
T ss_pred             hhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc--ccccCCCCCCCCCchhhccccccc
Confidence            3344455556678899988778887    665544 577888888765443322  345678889999999998889999


Q ss_pred             ccchHHHHHHHHHHHhCCCCCC
Q psy15108        138 KSDVYAYACLIWEIFNKGEMPF  159 (223)
Q Consensus       138 ~~Di~slG~il~~l~~~~~~p~  159 (223)
                      ..|.|+++.--.++. -+..|-
T Consensus       410 ~p~~~~~~~~~~~~a-p~~pPr  430 (829)
T KOG0576|consen  410 CPDSGSLAVSAIQMA-PGLPPR  430 (829)
T ss_pred             CCCccCCCcchhhcC-CCCCCC
Confidence            999999997555554 454443

>PRK10271 thiK thiamine kinase; Provisional

Probab=92.42  E-value=0.13  Score=37.64  Aligned_cols=29  Identities=21%  Similarity=0.189  Sum_probs=25.0

Q ss_pred             CcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         77 RLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        77 ~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      ..+|+|+.|.|+++..++ ++++|++.+..
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            468999999999988776 88999998754

>PLN02236 choline kinase

Probab=91.98  E-value=0.27  Score=39.79  Aligned_cols=31  Identities=16%  Similarity=0.162  Sum_probs=26.4

Q ss_pred             CCcccCCCCCCCeeeec-CCCeEEcCCCCCcc
Q psy15108         76 KRLIHKDIAARNCLISS-DLSVKISLSGLSKD  106 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~-~~~~~l~df~~~~~  106 (223)
                      ..++|+|+++.||+++. ++.+.++||..+..
T Consensus       200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        200 IGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             ceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            46899999999999986 46799999998753

>KOG1093|consensus

Probab=91.88  E-value=0.11  Score=43.93  Aligned_cols=74  Identities=22%  Similarity=0.220  Sum_probs=45.4

Q ss_pred             CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC----------CCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy15108        136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW----------KHSSKTPEYITSLHEKCIHPHPHQRPT  205 (223)
Q Consensus       136 ~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rps  205 (223)
                      ..++|||++|.++.++. .|..-+......+....+..-....          ...-.++..+.++..+|+-..|..||.
T Consensus       109 ~pKsdVwsl~~i~~el~-L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l  187 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELY-LGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPL  187 (725)
T ss_pred             CcchhhhhHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccc
Confidence            35899999999999987 6765555444444333332210000          001123455677888899999988886


Q ss_pred             HHHHH
Q psy15108        206 FPSIV  210 (223)
Q Consensus       206 ~~~ll  210 (223)
                      ..++.
T Consensus       188 ~~~~~  192 (725)
T KOG1093|consen  188 PMELS  192 (725)
T ss_pred             hhHHh
Confidence            65544

>TIGR02721 ycfN_thiK thiamine kinase

Probab=91.73  E-value=0.14  Score=39.38  Aligned_cols=29  Identities=21%  Similarity=0.249  Sum_probs=25.3

Q ss_pred             CcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         77 RLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        77 ~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      .++|+|+.+.||+++.++ +.++||+.+..
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence            589999999999998876 78999987753

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=91.63  E-value=0.29  Score=36.45  Aligned_cols=31  Identities=26%  Similarity=0.212  Sum_probs=21.5

Q ss_pred             CCcccCCCCCCCeee-ecCCCeEEcCCCCCcc
Q psy15108         76 KRLIHKDIAARNCLI-SSDLSVKISLSGLSKD  106 (223)
Q Consensus        76 ~~i~H~di~~~nil~-~~~~~~~l~df~~~~~  106 (223)
                      ..++|+|+.+.||++ ..++.++++||..+..
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            367899999999999 7888999999998753

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=91.09  E-value=0.84  Score=33.82  Aligned_cols=58  Identities=12%  Similarity=0.159  Sum_probs=38.8

Q ss_pred             CChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC----CeEEcC-C
Q psy15108         27 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL----SVKISL-S  101 (223)
Q Consensus        27 g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~----~~~l~d-f  101 (223)
                      -||.++++.                ..+++ ...+   .+-+-..+|-+.+|+.+|++|.||++....    .+.++| |
T Consensus       108 ~TL~~~l~~----------------~~~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~  167 (199)
T PF10707_consen  108 PTLEDYLKE----------------GGLTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGL  167 (199)
T ss_pred             ccHHHHHHc----------------CCccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCC
Confidence            458888854                23566 4433   334445677889999999999999987542    356666 5


Q ss_pred             CCC
Q psy15108        102 GLS  104 (223)
Q Consensus       102 ~~~  104 (223)
                      |-.
T Consensus       168 G~~  170 (199)
T PF10707_consen  168 GEK  170 (199)
T ss_pred             CCc
Confidence            543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=91.00  E-value=0.41  Score=38.46  Aligned_cols=29  Identities=21%  Similarity=0.182  Sum_probs=25.8

Q ss_pred             cccCCCCCCCeeeecCCC-eEEcCCCCCcc
Q psy15108         78 LIHKDIAARNCLISSDLS-VKISLSGLSKD  106 (223)
Q Consensus        78 i~H~di~~~nil~~~~~~-~~l~df~~~~~  106 (223)
                      ++|+|+.+.||+++.... +-++||+-+..
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence            999999999999998875 88999998753

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=90.94  E-value=0.31  Score=38.67  Aligned_cols=29  Identities=10%  Similarity=0.024  Sum_probs=26.6

Q ss_pred             CcccCCCCCCCeeeecCCCeEEcCCCCCc
Q psy15108         77 RLIHKDIAARNCLISSDLSVKISLSGLSK  105 (223)
Q Consensus        77 ~i~H~di~~~nil~~~~~~~~l~df~~~~  105 (223)
                      +++|+|+.+.|+++++++.+-++||..+.
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            79999999999999998889999998765

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PRK12396 5-methylribose kinase; Reviewed

Probab=89.96  E-value=0.48  Score=38.99  Aligned_cols=32  Identities=22%  Similarity=0.332  Sum_probs=27.0

Q ss_pred             hcCCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         74 SDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        74 H~~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      ..+.++|||+.|.||+++.+ .++++|..++-.
T Consensus       225 ~~~aLlHGDlHtGSI~v~~~-~~kvIDpEFAfy  256 (409)
T PRK12396        225 NAQALIHGDLHTGSVFVKND-STKVIDPEFAFY  256 (409)
T ss_pred             cchhhccCcCCCCCEEecCC-ceEEEccccccc
Confidence            45689999999999999875 689999888753

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=89.95  E-value=0.26  Score=39.29  Aligned_cols=35  Identities=17%  Similarity=0.084  Sum_probs=29.9

Q ss_pred             cCCcccCCCCCCCeeeecCCCeEEcCCCCCcccch
Q psy15108         75 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  109 (223)
Q Consensus        75 ~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~  109 (223)
                      ...++|+|+.+.|++++..+.+-|+||+++.....
T Consensus       197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP  231 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP  231 (321)
T ss_pred             CceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence            34789999999999999998899999999875433

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=89.03  E-value=0.63  Score=36.53  Aligned_cols=46  Identities=17%  Similarity=0.105  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHHHHhh------cCCcccCCCCCCCeeeecC--C---CeEEcCCCCCc
Q psy15108         60 VTMAYQVALGLEHIS------DKRLIHKDIAARNCLISSD--L---SVKISLSGLSK  105 (223)
Q Consensus        60 ~~i~~~i~~~l~~LH------~~~i~H~di~~~nil~~~~--~---~~~l~df~~~~  105 (223)
                      ..+...+.+.+..+.      -.-++|||++..||++..+  +   .+++.||.+++
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~  249 (294)
T PF02958_consen  193 EALLDKFFERMQELVDPSKEPFNVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLAR  249 (294)
T ss_pred             HHHHHHHHHHHHHHhccccCCceEEEcCccCHHhEeEccccccccccceeecccccc
Confidence            334444444444444      1358999999999999655  2   58999999875

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=88.73  E-value=0.6  Score=37.63  Aligned_cols=38  Identities=24%  Similarity=0.221  Sum_probs=24.6

Q ss_pred             HHHHHHHHHHHHHHHHHhh----cCCcccCCCCCCCeeeecC
Q psy15108         56 TSQAVTMAYQVALGLEHIS----DKRLIHKDIAARNCLISSD   93 (223)
Q Consensus        56 ~~~~~~i~~~i~~~l~~LH----~~~i~H~di~~~nil~~~~   93 (223)
                      .+.+..++.|++--.--..    -.+++|.||||.|||+-++
T Consensus       274 ~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds  315 (434)
T PF05445_consen  274 VEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDS  315 (434)
T ss_pred             HHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecC
Confidence            4556666777654331122    2468999999999997543

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=88.32  E-value=0.34  Score=37.88  Aligned_cols=31  Identities=23%  Similarity=0.199  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCeeeecCCC-eEEcCCCCCcc
Q psy15108         76 KRLIHKDIAARNCLISSDLS-VKISLSGLSKD  106 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~~-~~l~df~~~~~  106 (223)
                      ..++|+|+++.||+++..+. .-++||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            35899999999999987555 46999998753

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=87.35  E-value=1  Score=37.25  Aligned_cols=31  Identities=13%  Similarity=0.269  Sum_probs=26.2

Q ss_pred             cCCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         75 DKRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        75 ~~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      ...++|||+.+.||++..+ .++++|+.++..
T Consensus       222 ~~~l~HgDl~~gni~~~~~-~~~viD~E~a~~  252 (401)
T PRK09550        222 AEALLHGDLHTGSIFVTEE-ETKVIDPEFAFY  252 (401)
T ss_pred             CCceeeccCCcccEEeeCC-CcEEEecccccc
Confidence            4579999999999999766 689999987753

>PRK11768 serine/threonine protein kinase; Provisional

Probab=87.02  E-value=1.2  Score=35.65  Aligned_cols=29  Identities=17%  Similarity=0.034  Sum_probs=24.2

Q ss_pred             CCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         76 KRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      .+++|+|+.+.||+++ + .+.++||+.+..
T Consensus       196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~  224 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-GPHFVDLDDARM  224 (325)
T ss_pred             ccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence            4789999999999995 3 578999997753

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=86.75  E-value=1.6  Score=35.16  Aligned_cols=30  Identities=10%  Similarity=0.100  Sum_probs=25.4

Q ss_pred             CcccCCCCCCCeeeec-CCCeEEcCCCCCcc
Q psy15108         77 RLIHKDIAARNCLISS-DLSVKISLSGLSKD  106 (223)
Q Consensus        77 ~i~H~di~~~nil~~~-~~~~~l~df~~~~~  106 (223)
                      -++|+|+.+.||+++. ++.+.++||+.+..
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence            3789999999999975 46899999998753

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=85.25  E-value=1  Score=36.71  Aligned_cols=32  Identities=19%  Similarity=0.277  Sum_probs=26.2

Q ss_pred             hcCCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         74 SDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        74 H~~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      ....++|||+.+.||++..+ .++++|+.++..
T Consensus       190 ~~~~llHGDl~~gNi~~~~~-~~~~iD~e~~~~  221 (370)
T TIGR01767       190 SAETLLHGDLHSGSIFVSEH-ETKVIDPEFAFY  221 (370)
T ss_pred             CcceeeeccCCcccEEEcCC-CCEEEcCccccc
Confidence            45689999999999999765 477999987753

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PRK06148 hypothetical protein; Provisional

Probab=85.16  E-value=1.6  Score=40.68  Aligned_cols=32  Identities=22%  Similarity=0.288  Sum_probs=26.3

Q ss_pred             CCcccCCCCCCCeeeecCC--CeE-EcCCCCCccc
Q psy15108         76 KRLIHKDIAARNCLISSDL--SVK-ISLSGLSKDT  107 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~--~~~-l~df~~~~~~  107 (223)
                      .+++|+|+.+.||+++.++  .+. ++|||.+...
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~  237 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVHA  237 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECcccccc
Confidence            4799999999999999775  454 9999987643

>PHA03111 Ser/Thr kinase; Provisional

Probab=84.61  E-value=2.2  Score=34.43  Aligned_cols=38  Identities=24%  Similarity=0.268  Sum_probs=26.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhc----CCcccCCCCCCCeeeecC
Q psy15108         56 TSQAVTMAYQVALGLEHISD----KRLIHKDIAARNCLISSD   93 (223)
Q Consensus        56 ~~~~~~i~~~i~~~l~~LH~----~~i~H~di~~~nil~~~~   93 (223)
                      .+.+..++.||+--.-...+    .+++|.||||.|||+-++
T Consensus       278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence            45677777787765433322    468999999999997544

>PRK06149 hypothetical protein; Provisional

Probab=83.93  E-value=1.6  Score=40.48  Aligned_cols=32  Identities=22%  Similarity=0.092  Sum_probs=25.6

Q ss_pred             cCCcccCCCCCCCeeeecCC--C---eEEcCCCCCcc
Q psy15108         75 DKRLIHKDIAARNCLISSDL--S---VKISLSGLSKD  106 (223)
Q Consensus        75 ~~~i~H~di~~~nil~~~~~--~---~~l~df~~~~~  106 (223)
                      ..+++|+|+.+.||+++.+.  .   .-++|||.+..
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~  243 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLVR  243 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccchh
Confidence            45899999999999998652  2   36999997754

>PLN02756 S-methyl-5-thioribose kinase

Probab=81.63  E-value=2.2  Score=35.46  Aligned_cols=30  Identities=13%  Similarity=0.317  Sum_probs=25.1

Q ss_pred             cCCcccCCCCCCCeeeecCCCeEEcCCCCCc
Q psy15108         75 DKRLIHKDIAARNCLISSDLSVKISLSGLSK  105 (223)
Q Consensus        75 ~~~i~H~di~~~nil~~~~~~~~l~df~~~~  105 (223)
                      ...++|||+.+.||++..++ .+++|..++-
T Consensus       229 ~~~L~HGDl~~g~i~~~~~~-~~~id~ef~~  258 (418)
T PLN02756        229 AQALVHGDLHTGSVMVTPDS-TQVIDPEFAF  258 (418)
T ss_pred             ccceeecCCCCCcEEEcCCC-ceEecchhhc
Confidence            46799999999999998864 8888887664

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=80.31  E-value=2.4  Score=31.59  Aligned_cols=37  Identities=19%  Similarity=0.154  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCC
Q psy15108         63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  104 (223)
Q Consensus        63 ~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~  104 (223)
                      +.+|.+-+..+|..||+-+|+++.|..     .-+++|||.+
T Consensus       170 ~~~~~~dl~~~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  170 IPQMLRDLKILHKLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHHHHHHHHHHHCCeeeccCcccccc-----CCEEEecccC
Confidence            456777788899999999999999986     3477888753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	223
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		2e-29
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-29
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		3e-29
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		3e-29
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		3e-29
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		3e-29
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		4e-29
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		4e-29
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		4e-29
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		4e-29
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		4e-29
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		4e-29
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		4e-29
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		5e-29
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		9e-29
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-28
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-28
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-28
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-28
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-28
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-28
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		2e-28
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		3e-28
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		3e-28
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		3e-28
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-28
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		3e-28
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		3e-28
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		3e-28
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		3e-28
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		3e-28
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		4e-28
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-27
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		3e-27
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		6e-27
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		6e-27
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		8e-27
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		9e-27
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		9e-27
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		2e-26
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-26
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-26
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-26
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		2e-26
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-26
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		2e-26
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		2e-26
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		2e-26
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		5e-26
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-26
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-26
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		8e-26
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		8e-26
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-26
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-26
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-26
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		8e-26
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		8e-26
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-26
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-26
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-26
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		9e-26
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		9e-26
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		9e-26
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		9e-26
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-26
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-25
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		1e-25
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-25
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		2e-25
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		2e-25
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-25
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		3e-25
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		3e-25
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		4e-25
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		8e-25
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		1e-24
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-24
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-24
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-24
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-24
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		3e-24
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-24
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		3e-24
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-24
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		3e-24
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		4e-24
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		4e-24
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		4e-24
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		4e-24
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		4e-24
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		4e-24
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		4e-24
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		4e-24
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-24
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		5e-24
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		5e-24
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-24
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-24
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		5e-24
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		6e-24
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		7e-24
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		7e-24
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-23
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		3e-23
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		4e-23
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		9e-23
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		9e-23
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		1e-22
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		1e-22
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-22
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-22
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-22
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-22
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-22
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		1e-22
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-22
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-22
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		1e-22
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-22
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-22
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		5e-22
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		6e-22
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		7e-22
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		8e-22
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		8e-22
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		8e-22
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		9e-22
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		9e-22
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		9e-22
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		9e-22
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		9e-22
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		9e-22
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		9e-22
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		9e-22
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		9e-22
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-21
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-21
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-21
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-21
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		1e-21
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-21
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-21
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-21
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-21
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-21
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-21
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-21
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		3e-21
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-21
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-21
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-21
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		5e-21
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		5e-21
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		5e-21
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		6e-21
2pl0_A	289	Lck Bound To Imatinib Length = 289		7e-21
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		7e-21
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		8e-21
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		8e-21
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		8e-21
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		1e-20
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		2e-20
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		2e-20
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		3e-20
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		3e-20
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-20
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		3e-20
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-20
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		3e-20
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		3e-20
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		4e-20
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		4e-20
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		4e-20
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		4e-20
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		4e-20
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		4e-20
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		4e-20
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		4e-20
1fvr_A	327	Tie2 Kinase Domain Length = 327		4e-20
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-20
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		4e-20
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		4e-20
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		4e-20
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		4e-20
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		4e-20
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		4e-20
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-20
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		5e-20
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		5e-20
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		5e-20
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		5e-20
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		6e-20
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		6e-20
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		6e-20
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		8e-20
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		9e-20
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		9e-20
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		1e-19
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-19
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-19
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		2e-19
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		3e-19
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-19
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		3e-19
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		3e-19
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		3e-19
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		3e-19
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		3e-19
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-19
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		4e-19
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		4e-19
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		4e-19
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-19
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		5e-19
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		5e-19
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		5e-19
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		5e-19
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		5e-19
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		5e-19
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		5e-19
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		6e-19
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		6e-19
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		6e-19
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		7e-19
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		8e-19
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		8e-19
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		8e-19
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		9e-19
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		9e-19
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-18
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		2e-18
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-18
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-18
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		3e-18
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		6e-18
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		8e-18
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-17
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-17
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		2e-17
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		2e-17
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		3e-17
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-17
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-17
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		3e-17
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		3e-17
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		4e-17
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		4e-17
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		4e-17
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		4e-17
4fl3_A	635	Structural And Biophysical Characterization Of The		5e-17
4fl2_A	636	Structural And Biophysical Characterization Of The		6e-17
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		7e-17
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		8e-17
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		1e-16
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-16
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-16
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		3e-16
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		3e-16
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		4e-16
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		7e-16
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		7e-16
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		7e-16
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		1e-15
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		1e-15
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		1e-15
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		1e-15
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-15
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-15
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		1e-15
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-15
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		1e-15
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		1e-15
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		1e-15
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-15
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		1e-15
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-15
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		1e-15
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		1e-15
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		1e-15
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		1e-15
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		1e-15
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		1e-15
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		1e-15
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-15
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		2e-15
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		3e-15
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		4e-15
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		4e-15
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		6e-15
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		7e-15
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		7e-15
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		7e-15
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		4e-14
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		4e-14
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		1e-13
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		1e-13
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		3e-13
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-12
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-12
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		3e-12
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-12
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		5e-12
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		5e-12
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		5e-12
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		6e-12
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		7e-12
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		7e-12
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		8e-12
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		8e-12
4h58_A	275	Braf In Complex With Compound 3 Length = 275		8e-12
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		8e-12
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		1e-11
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		1e-11
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		4e-11
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		5e-11
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		6e-11
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		1e-10
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		1e-10
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-10
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-10
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		1e-10
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-10
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		1e-10
3iok_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		1e-10
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-10
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		1e-10
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-10
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-10
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-10
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		1e-10
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-10
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-10
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		4e-09
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		6e-09
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		7e-09
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		2e-08
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		3e-08
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		3e-08
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-07
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-07
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		2e-07
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		2e-07
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		3e-07
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-07
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		4e-07
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		5e-07
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		7e-07
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		7e-07
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		8e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		8e-07
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-06
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-06
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-06
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-06
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-06
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-06
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		3e-06
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		4e-06
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		4e-06
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		5e-06
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		6e-06
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		6e-06
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		6e-06
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		8e-06
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		9e-06
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		9e-06
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-05
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		1e-05
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-05
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-05
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-05
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-05
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-05
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		3e-05
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-05
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-05
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		4e-05
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		7e-05
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		7e-05
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		7e-05
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		7e-05
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		7e-05
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		8e-05
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		9e-05
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		1e-04
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-04
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-04
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		1e-04
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-04
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		1e-04
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-04
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-04
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-04
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-04
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-04
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-04
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-04
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-04
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-04
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-04
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		3e-04
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		3e-04
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		3e-04
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		3e-04
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		3e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		3e-04
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		3e-04
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-04
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-04
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		3e-04
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		3e-04
3gni_B	389	Structure Of Strad And Mo25 Length = 389		3e-04
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		3e-04
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		3e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		3e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		3e-04
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		3e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		3e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-04
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		4e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		4e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		4e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		4e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		4e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		4e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		4e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		4e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		4e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		4e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		4e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		4e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		4e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		4e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		4e-04
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		4e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		4e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		4e-04
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		4e-04
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		4e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-04
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		4e-04
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		5e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		5e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		5e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		5e-04
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		5e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		5e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-04
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		5e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		6e-04
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		6e-04
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		6e-04
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		6e-04
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		6e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-04
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		7e-04
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		7e-04
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		7e-04
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		7e-04
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		8e-04
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		8e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		8e-04
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		8e-04
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		8e-04
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		8e-04
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		8e-04
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		8e-04
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		8e-04
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		8e-04
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		8e-04
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		9e-04
2oza_B	366	Structure Of P38alpha Complex Length = 366		9e-04
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		9e-04
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		9e-04
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		9e-04
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		9e-04
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		9e-04
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		9e-04
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		9e-04
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		9e-04

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 7/190 (3%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK +L + R           P ++ +     + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 104 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 158
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SD++++ 
Sbjct: 159 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 218
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEI +  E P+  LS++QVL  +             PE +T L   C   +P  RPT
Sbjct: 219 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPT 277
Query: 206 FPSIVTQLSD 215
           F  IV  L D
Sbjct: 278 FLEIVNLLKD 287

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score =  125 bits (314), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 7/190 (3%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK +L + R           P ++ +     + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 159
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SD++++ 
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEI +  E P+  LS++QVL  +             PE +T L   C   +P  RPT
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPT 278
Query: 206 FPSIVTQLSD 215
           F  IV  L D
Sbjct: 279 FLEIVNLLKD 288

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score =  125 bits (313), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 108/190 (56%), Gaps = 7/190 (3%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK +L + R           P ++ +     + MA ++A G+ +++ K+ +H+++AAR
Sbjct: 106 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRNLAAR 160
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SD++++ 
Sbjct: 161 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 220
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEI +  E P+  LS++QVL  +             PE +T L   C   +P+ RPT
Sbjct: 221 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPNMRPT 279
Query: 206 FPSIVTQLSD 215
           F  IV  L D
Sbjct: 280 FLEIVNLLKD 289

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score =  124 bits (312), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 7/190 (3%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK +L + R           P ++ +     + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 159
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC+++ D +VKI   G+++D Y+  YY K    +LP+RW+  E++ D  F+T SD++++ 
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEI +  E P+  LS++QVL  +             PE +T L   C   +P  RPT
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPT 278
Query: 206 FPSIVTQLSD 215
           F  IV  L D
Sbjct: 279 FLEIVNLLKD 288

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score =  124 bits (312), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 108/190 (56%), Gaps = 7/190 (3%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK +L + R           P ++ +     + MA ++A G+ +++ K+ +H+++AAR
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRNLAAR 159
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SD++++ 
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEI +  E P+  LS++QVL  +             PE +T L   C   +P+ RPT
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPNMRPT 278
Query: 206 FPSIVTQLSD 215
           F  IV  L D
Sbjct: 279 FLEIVNLLKD 288

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score =  124 bits (312), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R           P     S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 102 RGDLKSYLRSLRPAMANNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 156
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 157 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 216
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K  +  P+ +  L   C   +P  RP
Sbjct: 217 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 275
Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 276 SFLEIISSIKEEM 288

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score =  124 bits (311), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R           P     S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 99  RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 153
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 154 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 213
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K  +  P+ +  L   C   +P  RP
Sbjct: 214 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 272
Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 273 SFLEIISSIKEEM 285

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score =  124 bits (311), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 109/193 (56%), Gaps = 7/193 (3%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R           P     S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 134 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 188
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 189 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 248
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K     P+ +  L   C   +P  RP
Sbjct: 249 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRP 307
Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 308 SFLEIISSIKEEM 320

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score =  124 bits (311), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R           P     S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 105 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 159
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 160 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 219
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K  +  P+ +  L   C   +P  RP
Sbjct: 220 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 278
Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 279 SFLEIISSIKEEM 291

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score =  124 bits (311), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R           P     S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 105 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 159
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 160 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 219
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K  +  P+ +  L   C   +P  RP
Sbjct: 220 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 278
Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 279 SFLEIISSIKEEM 291

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score =  124 bits (311), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R           P     S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 112 RGDLKSYLRSLRPAMANNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 166
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 167 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K  +  P+ +  L   C   +P  RP
Sbjct: 227 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 285
Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 286 SFLEIISSIKEEM 298

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score =  124 bits (311), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R           P     S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 106 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 160
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 161 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K  +  P+ +  L   C   +P  RP
Sbjct: 221 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 279
Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 280 SFLEIISSIKEEM 292

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score =  124 bits (311), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R           P     S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 103 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 157
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 158 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 217
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K  +  P+ +  L   C   +P  RP
Sbjct: 218 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 276
Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 277 SFLEIISSIKEEM 289

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score =  124 bits (310), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R           P     S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 112 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 166
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 167 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K  +  P+ +  L   C   +P  RP
Sbjct: 227 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 285
Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 286 SFLEIISSIKEEM 298

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score =  123 bits (308), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 109/193 (56%), Gaps = 7/193 (3%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R           P     S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 99  RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 153
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC ++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 154 RNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 213
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K  +  P+ +  L   C   +P  RP
Sbjct: 214 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLLELMRMCWQYNPKMRP 272
Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 273 SFLEIISSIKEEM 285

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATR--XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R             P    LS+   V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 159 KGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 217
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ D  +KI+  GL++D +  +YY K  N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 277
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K S+ T E    + + C H  P Q
Sbjct: 278 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 336
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 337 RPTFKQLVEDL 347

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATR--XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R             P    LS+   V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 110 KGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 168
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ D  +KI+  GL++D +  +YY K  N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 169 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 228
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K S+ T E    + + C H  P Q
Sbjct: 229 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 287
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 288 RPTFKQLVEDL 298

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATR--XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R             P    LS+   V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 111 KGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 169
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ D  +KI+  GL++D +  +YY K  N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 170 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 229
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K S+ T E    + + C H  P Q
Sbjct: 230 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 288
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 289 RPTFKQLVEDL 299

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATR--XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R             P    LS+   V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 107 KGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 165
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ D  +KI+  GL++D +  +YY K  N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 166 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 225
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K S+ T E    + + C H  P Q
Sbjct: 226 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 284
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 285 RPTFKQLVEDL 295

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATR--XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R             P    LS+   V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 118 KGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 176
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ D  +KI+  GL++D +  +YY K  N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 236
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K S+ T E    + + C H  P Q
Sbjct: 237 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 295
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 296 RPTFKQLVEDL 306

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXX--XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R             P    LS+   V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 118 KGNLREYLQARRPPGLEYCYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 176
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ D  +KI+  GL++D +  +YY K  N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 236
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K S+ T E    + + C H  P Q
Sbjct: 237 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 295
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 296 RPTFKQLVEDL 306

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXX--XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R             P    LS+   V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 103 KGNLREYLQARRPPGLEYCYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 161
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ D  +KI+  GL++D +  +YY K  N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 162 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 221
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K S+ T E    + + C H  P Q
Sbjct: 222 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 280
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 281 RPTFKQLVEDL 291

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G+++++ K+ +H+D+AAR
Sbjct: 117 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 162
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KEYY   N   A LP++W+  E++   +F+TKSDV++
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 223 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 280
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 281 RPSFSELVSRIS 292

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G+++++ K+ +H+D+AAR
Sbjct: 135 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 180
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KEYY   N   A LP++W+  E++   +F+TKSDV++
Sbjct: 181 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 240
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 241 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 298
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 299 RPSFSELVSRIS 310

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G+++++ K+ +H+D+AAR
Sbjct: 117 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 162
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KEYY   N   A LP++W+  E++   +F+TKSDV++
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 223 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 280
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 281 RPSFSELVSRIS 292

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G+++++ K+ +H+D+AAR
Sbjct: 114 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 159
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KEYY   N   A LP++W+  E++   +F+TKSDV++
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 220 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 277
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 278 RPSFSELVSRIS 289

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G+++++ K+ +H+D+AAR
Sbjct: 109 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 154
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KEYY   N   A LP++W+  E++   +F+TKSDV++
Sbjct: 155 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 214
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 215 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 272
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 273 RPSFSELVSRIS 284

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G+++++ K+ +H+D+AAR
Sbjct: 136 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 181
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KEYY   N   A LP++W+  E++   +F+TKSDV++
Sbjct: 182 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 241
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 242 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 299
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 300 RPSFSELVSRIS 311

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G+++++ K+ +H+D+AAR
Sbjct: 116 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 161
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KEYY   N   A LP++W+  E++   +F+TKSDV++
Sbjct: 162 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 221
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 222 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 279
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 280 RPSFSELVSRIS 291

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G+++++ K+ +H+D+AAR
Sbjct: 112 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 157
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KEYY   N   A LP++W+  E++   +F+TKSDV++
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 218 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 275
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 276 RPSFSELVSRIS 287

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G+++++ K+ +H+D+AAR
Sbjct: 115 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 160
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KEYY   N   A LP++W+  E++   +F+TKSDV++
Sbjct: 161 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 220
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 221 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 278
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 279 RPSFSELVSRIS 290

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score =  120 bits (302), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 100/161 (62%), Gaps = 2/161 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           LS+   V+ AYQVA G+E+++ K+ IH+D+AARN L++ D  +KI+  GL++D +  +YY
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 114 -KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
            K  N  LP++W+  EA+FD  ++ +SDV+++  L+WEIF  G  P+P +  +++   L+
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
                 K S+ T E    + + C H  P QRPTF  +V  L
Sbjct: 267 EGHRMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 306

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 4/190 (2%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL +FL A             P    L+ SQ + +A Q+A G+ +++ +  +H+D+A R
Sbjct: 100 GDLNKFLRAHGPDAVLMAEGNPPT--ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATR 157
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NCL+  +L VKI   G+S+D Y  +YY+     +LP+RW+P E++   +F+T+SDV++  
Sbjct: 158 NCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG 217
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEIF  G+ P+  LS+++V+  +   ++  +     P+ +  L   C    PH R  
Sbjct: 218 VVLWEIFTYGKQPWYQLSNNEVIECITQGRVL-QRPRTCPQEVYELMLGCWQREPHMRKN 276
Query: 206 FPSIVTQLSD 215
              I T L +
Sbjct: 277 IKGIHTLLQN 286

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score =  118 bits (295), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           ++    ++ ++QVA G+E +S ++ IH+D+AARN L+S +  VKI   GL++D Y+  +Y
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +  LPL+W+  E++FD  +STKSDV++Y  L+WEIF+ G  P+P +  D+   S+L
Sbjct: 256 VRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRL 315
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
                       TPE I  +   C H  P +RP F  +V +L D +
Sbjct: 316 REGMRMRAPEYSTPE-IYQIMLDCWHRDPKERPRFAELVEKLGDLL 360

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score =  117 bits (293), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 98/157 (62%), Gaps = 2/157 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           LS ++ + +A QVA G+ ++S+++ +H+D+A RNCL+  ++ VKI+  GLS++ Y  +YY
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 114 KY-RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
           K   N  +P+RW+P E++F + ++T+SDV+AY  ++WEIF+ G  P+  ++ ++V+  + 
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR 290
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              +        P  + +L   C    P  RP+F SI
Sbjct: 291 DGNI-LACPENCPLELYNLMRLCWSKLPADRPSFCSI 326

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score =  117 bits (292), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK +L + R           P ++ +     + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 159
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC+++ D +VKI   G+++D  + +   K    +LP+RW+  E++ D  F+T SD++++ 
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEI +  E P+  LS++QVL  +             PE +T L   C   +P+ RPT
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPNMRPT 278
Query: 206 FPSIVTQLSD 215
           F  IV  L D
Sbjct: 279 FLEIVNLLKD 288

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score =  116 bits (291), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 7/190 (3%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK +L + R           P ++ +     + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 102 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 156
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC+++ D +VKI   G+++D  + +   K    +LP+RW+  E++ D  F+T SD++++ 
Sbjct: 157 NCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 216
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEI +  E P+  LS++QVL  +             PE +T L   C   +P  RPT
Sbjct: 217 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPT 275
Query: 206 FPSIVTQLSD 215
           F  IV  L D
Sbjct: 276 FLEIVNLLKD 285

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score =  116 bits (291), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATR--XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R             P    LS+   V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 118 KGNLREYLQARRPPGLEFSFNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 176
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ D  +KI+  GL++D +  +   K  N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 236
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K S+ T E    + + C H  P Q
Sbjct: 237 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 295
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 296 RPTFKQLVEDL 306

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score =  116 bits (291), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 7/190 (3%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK +L + R           P ++ +     + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 159
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC+++ D +VKI   G+++D  + +   K    +LP+RW+  E++ D  F+T SD++++ 
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEI +  E P+  LS++QVL  +             PE +T L   C   +P  RPT
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPT 278
Query: 206 FPSIVTQLSD 215
           F  IV  L D
Sbjct: 279 FLEIVNLLKD 288

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G+++++ K+ +H+D+AAR
Sbjct: 116 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 161
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KE     N   A LP++W+  E++   +F+TKSDV++
Sbjct: 162 NCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 221
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 222 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 279
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 280 RPSFSELVSRIS 291

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R           P     S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 97  RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 151
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D  + +   K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 152 RNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 211
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K  +  P+ +  L   C   +P  RP
Sbjct: 212 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLLELMRMCWQYNPKMRP 270
Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 271 SFLEIISSIKEEM 283

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G++ ++ K+ +H+D+AAR
Sbjct: 176 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 221
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KE+    N   A LP++W+  E++   +F+TKSDV++
Sbjct: 222 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 281
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 282 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 339
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 340 RPSFSELVSRIS 351

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G++ ++ K+ +H+D+AAR
Sbjct: 115 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 160
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KE+    N   A LP++W+  E++   +F+TKSDV++
Sbjct: 161 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 220
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 221 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 278
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 279 RPSFSELVSRIS 290

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G++ ++ K+ +H+D+AAR
Sbjct: 118 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 163
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KE+    N   A LP++W+  E++   +F+TKSDV++
Sbjct: 164 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 223
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 224 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 281
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 282 RPSFSELVSRIS 293

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G++ ++ K+ +H+D+AAR
Sbjct: 117 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 162
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KE+    N   A LP++W+  E++   +F+TKSDV++
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 223 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 280
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 281 RPSFSELVSRIS 292

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score =  115 bits (287), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G++ ++ K+ +H+D+AAR
Sbjct: 122 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 167
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KE+    N   A LP++W+  E++   +F+TKSDV++
Sbjct: 168 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 227
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 228 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 285
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 286 RPSFSELVSRIS 297

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score =  115 bits (287), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G++ ++ K+ +H+D+AAR
Sbjct: 117 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 162
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D Y KE+    N   A LP++W+  E++   +F+TKSDV++
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 223 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 280
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 281 RPSFSELVSRIS 292

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score =  115 bits (287), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R           P     S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 106 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 160
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D  + +   K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 161 RNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K  +  P+ +  L   C   +P  RP
Sbjct: 221 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 279
Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 280 SFLEIISSIKEEM 292

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score =  114 bits (285), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+  +Y
Sbjct: 141 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY 200
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRL 260
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 305

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score =  113 bits (283), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ +  +KI+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 303 RPTFKQLVEDL 313

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score =  113 bits (283), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ +  +KI+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 303 RPTFKQLVEDL 313

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 117 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 175
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ +  +KI+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 176 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 235
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 236 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 294
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 295 RPTFKQLVEDL 305

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 114 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 172
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ +  +KI+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 173 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 232
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 233 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 291
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 292 RPTFKQLVEDL 302

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ +  +KI+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 303 RPTFKQLVEDL 313

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ +  +KI+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 303 RPTFKQLVEDL 313

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+  +Y
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 316
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 317 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 361

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+  +Y
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 307
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 308 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 352

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+  +Y
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 310 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 354

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+  +Y
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 300

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score =  113 bits (282), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ +  +KI+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 303 RPTFKQLVEDL 313

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score =  113 bits (282), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ +  +KI+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 303 RPTFKQLVEDL 313

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score =  113 bits (282), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+  +Y
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 241
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 242 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 301
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 302 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 346

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score =  113 bits (282), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+  +Y
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 314
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 315 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 359

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score =  113 bits (282), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+  +Y
Sbjct: 141 LTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 200
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 260
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 305

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score =  113 bits (282), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 171 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 229
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ +  +KI+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 289
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 290 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 348
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 349 RPTFKQLVEDL 359

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score =  113 bits (282), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+  +Y
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 300

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+  +Y
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 309

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+  +Y
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 207 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 266
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 267 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 311

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ +  ++I+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 184 AARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 303 RPTFKQLVEDL 313

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 20/192 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL+ F+               P V+ L     +    QVA G++ ++ K+ +H+D+AAR
Sbjct: 118 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 163
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D   KE+    N   A LP++W+  E++   +F+TKSDV++
Sbjct: 164 NCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 223
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +  L+WE+  +G  P+PD++  D  +  L+ ++L        P Y   L  KC HP    
Sbjct: 224 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 281
Query: 203 RPTFPSIVTQLS 214
           RP+F  +V+++S
Sbjct: 282 RPSFSELVSRIS 293

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 102/175 (58%), Gaps = 10/175 (5%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P  R+L+    ++ A+Q++ G++++++ +L+H+D+AARN L++    +KIS  GLS+D Y
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 109 QKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
           +++ Y K     +P++W+  E++FD  ++T+SDV+++  L+WEI   G  P+P +  +++
Sbjct: 202 EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261
Query: 168 LSQLESKKLCWKHSSKTP----EYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC 218
            + L++      H  + P    E +  L  +C    P +RP F  I   L   M 
Sbjct: 262 FNLLKT-----GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score =  111 bits (278), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 112 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 170
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
            ARN L++ +  +KI+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 171 TARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 230
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 231 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 289
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 290 RPTFKQLVEDL 300

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 105/189 (55%), Gaps = 3/189 (1%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           GDL +FL+                V+S L     V +  Q+A G+E++S   ++HKD+A 
Sbjct: 97  GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 156
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RN L+   L+VKIS  GL ++ Y  +YYK   N++LP+RW+  EA+   +FS  SD+++Y
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 216
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WE+F+ G  P+   S+  V+  + ++++        P ++ +L  +C +  P +RP
Sbjct: 217 GVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL-PCPDDCPAWVYALMIECWNEFPSRRP 275
Query: 205 TFPSIVTQL 213
            F  I ++L
Sbjct: 276 RFKDIHSRL 284

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score =  111 bits (277), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 106/191 (55%), Gaps = 7/191 (3%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           GDL +FL+                V+S L     V +  Q+A G+E++S   ++HKD+A 
Sbjct: 114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 173
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RN L+   L+VKIS  GL ++ Y  +YYK   N++LP+RW+  EA+   +FS  SD+++Y
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 233
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL--CWKHSSKTPEYITSLHEKCIHPHPHQ 202
             ++WE+F+ G  P+   S+  V+  + ++++  C       P ++ +L  +C +  P +
Sbjct: 234 GVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC---PDDCPAWVYALMIECWNEFPSR 290
Query: 203 RPTFPSIVTQL 213
           RP F  I ++L
Sbjct: 291 RPRFKDIHSRL 301

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 102/185 (55%), Gaps = 3/185 (1%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           GDL +FL A              + +  L  SQ + +A Q+A G+ +++ +  +H+D+A 
Sbjct: 102 GDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLAT 161
Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNCL+ ++L VKI   G+S+D Y  +YY+     +LP+RW+P E++   +F+T+SDV+++
Sbjct: 162 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 221
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEIF  G+ P+  LS+ +V+  +   ++  +     P+ +  +   C    P QR 
Sbjct: 222 GVILWEIFTYGKQPWFQLSNTEVIECITQGRVL-ERPRVCPKEVYDVMLGCWQREPQQRL 280
Query: 205 TFPSI 209
               I
Sbjct: 281 NIKEI 285

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score =  110 bits (274), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+  + 
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDX 204
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 309

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL  FLLA+R               +L     V     +A G+E++S +  IH+D+AAR
Sbjct: 116 GDLHAFLLASRIGENPF---------NLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAAR 166
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI-LPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC+++ D++V ++  GLS+  Y  +YY+   A  LP++WL  E++ D+ ++  SDV+A+ 
Sbjct: 167 NCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFG 226
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
             +WEI  +G+ P+  + + ++ + L       K   +  E +  L  +C    P QRP+
Sbjct: 227 VTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL-KQPPECMEEVYDLMYQCWSADPKQRPS 285
Query: 206 FPSIVTQLSDAM 217
           F  +  +L + +
Sbjct: 286 FTCLRMELENIL 297

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL +FL +                  L   Q + +A QVA G+ +++    +H+D+A R
Sbjct: 128 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 187
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NCL+   L VKI   G+S+D Y  +YY+     +LP+RW+P E++   +F+T+SDV+++ 
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 247
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEIF  G+ P+  LS+ + +  +   +   +  +  PE + ++   C    P QR +
Sbjct: 248 VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPE-VYAIMRGCWQREPQQRHS 306
Query: 206 FPSIVTQL 213
              +  +L
Sbjct: 307 IKDVHARL 314

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 101/175 (57%), Gaps = 10/175 (5%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P  R+L+    ++ A+Q++ G++++++ +L+H+D+AARN L++    +KIS  GLS+D Y
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 109 QKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
           +++   K     +P++W+  E++FD  ++T+SDV+++  L+WEI   G  P+P +  +++
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261
Query: 168 LSQLESKKLCWKHSSKTP----EYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC 218
            + L++      H  + P    E +  L  +C    P +RP F  I   L   M 
Sbjct: 262 FNLLKT-----GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL +FL +                  L   Q + +A QVA G+ +++    +H+D+A R
Sbjct: 99  GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 158
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NCL+   L VKI   G+S+D Y  +YY+     +LP+RW+P E++   +F+T+SDV+++ 
Sbjct: 159 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 218
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEIF  G+ P+  LS+ + +  +   +   +  +  PE + ++   C    P QR +
Sbjct: 219 VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPE-VYAIMRGCWQREPQQRHS 277
Query: 206 FPSIVTQL 213
              +  +L
Sbjct: 278 IKDVHARL 285

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL +FL +                  L   Q + +A QVA G+ +++    +H+D+A R
Sbjct: 105 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 164
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NCL+   L VKI   G+S+D Y  +YY+     +LP+RW+P E++   +F+T+SDV+++ 
Sbjct: 165 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 224
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++WEIF  G+ P+  LS+ + +  +   +   +  +  PE + ++   C    P QR +
Sbjct: 225 VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPE-VYAIMRGCWQREPQQRHS 283
Query: 206 FPSIVTQL 213
              +  +L
Sbjct: 284 IKDVHARL 291

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 133 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 184
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 185 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 245 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 303
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 304 RPNFAIILERI 314

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 133 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 184
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 185 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 245 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 303
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 304 RPNFAIILERI 314

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 118 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 169
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 170 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 230 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 288
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 289 RPNFAIILERI 299

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 118 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 169
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 170 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 230 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 288
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 289 RPNFAIILERI 299

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 110 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 161
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 162 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 221
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 222 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 280
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 281 RPNFAIILERI 291

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 133 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 184
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 185 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 245 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 303
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 304 RPNFAIILERI 314

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 119 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 170
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 171 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 231 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 289
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 290 RPNFAIILERI 300

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 125 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 176
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 177 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 236
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 237 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 295
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 296 RPNFAIILERI 306

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 135 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 186
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 187 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 246
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 247 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 305
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 306 RPNFAIILERI 316

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 100/175 (57%), Gaps = 10/175 (5%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P  R+L+    ++ A+Q++ G++++++  L+H+D+AARN L++    +KIS  GLS+D Y
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 109 QKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
           +++   K     +P++W+  E++FD  ++T+SDV+++  L+WEI   G  P+P +  +++
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261
Query: 168 LSQLESKKLCWKHSSKTP----EYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC 218
            + L++      H  + P    E +  L  +C    P +RP F  I   L   M 
Sbjct: 262 FNLLKT-----GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 159 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 210
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 211 NCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 270
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 271 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 329
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 330 RPNFAIILERI 340

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 136 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 187
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 188 NCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 247
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 248 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 306
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 307 RPNFAIILERI 317

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 119 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 170
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 171 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 231 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 289
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 290 RPNFAIILERI 300

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score =  107 bits (267), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 145 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 196
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 197 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 256
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 257 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 315
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 316 RPNFAIILERI 326

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score =  107 bits (267), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D  +  + 
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 309

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score =  107 bits (267), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDLK FL  TR            +  SL+    + +A  +A G +++ +   IH+DIAAR
Sbjct: 119 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 170
Query: 87  NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           NCL++        KI   G+++D Y+  YY+    A+LP++W+P EA  +  F++K+D +
Sbjct: 171 NCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P  
Sbjct: 231 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 289
Query: 203 RPTFPSIVTQL 213
           RP F  I+ ++
Sbjct: 290 RPNFAIILERI 300

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score =  107 bits (267), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D  +  + 
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 300

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score =  107 bits (267), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D  +  + 
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 300

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score =  107 bits (267), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEXSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ +  +KI+  GL++D    +  K   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 303 RPTFKQLVEDL 313

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score =  107 bits (266), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Query: 26  KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           KG+L+++L A R            RV    ++    V+  YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++ +  +KI+  GL++D    +  K   N  LP++W+  EA+FD  ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           ++  L+WEIF  G  P+P +  +++   L+      K ++ T E    + + C H  P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
           RPTF  +V  L
Sbjct: 303 RPTFKQLVEDL 313

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score =  107 bits (266), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D  +  + 
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 309

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score =  107 bits (266), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D  +  + 
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
            +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++   +L
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           +           TPE   ++ + C H  P QRPTF  +V  L + +
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 309

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
             T Q + M   V   +E++  K+ +H+D+AARNCL++    VK+S  GLS+     EY 
Sbjct: 102 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 161
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
             R +  P+RW P E +   +FS+KSD++A+  L+WEI++ G+MP+   ++ +    + +
Sbjct: 162 SSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 220
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           + L         E + ++   C H    +RPTF  +++ + D M
Sbjct: 221 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 264

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score =  104 bits (260), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 108/200 (54%), Gaps = 21/200 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL QF+ + +              R+ +    ++   QVA G+E++++++ +H+D+AAR
Sbjct: 108 GDLLQFIRSPQ--------------RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAAR 153
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYY---KYRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           NC++    +VK++  GL++D   +EYY   ++R+A LP++W   E++    F+TKSDV++
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
           +  L+WE+  +G  P+  + D   L+   ++          P+ +  + ++C    P  R
Sbjct: 214 FGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVR 272
Query: 204 PTFPSIVT---QLSDAMCND 220
           PTF  +V    Q+  A+  D
Sbjct: 273 PTFRVLVGEVEQIVSALLGD 292

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 19/192 (9%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL  +LL +R           P+   L T   +     +ALG+E++S++  +H+D+AAR
Sbjct: 126 GDLHTYLLYSRLETG-------PKHIPLQT--LLKFMVDIALGMEYLSNRNFLHRDLAAR 176
Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKY-RNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           NC++  D++V ++  GLSK  Y  +YY+  R A +P++W+  E++ D  +++KSDV+A+ 
Sbjct: 177 NCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG 236
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPE-YITSLHE---KCIHPHPH 201
             +WEI  +G  P+P + + ++        L   H  K PE  +  L+E    C    P 
Sbjct: 237 VTMWEIATRGMTPYPGVQNHEMYDY-----LLHGHRLKQPEDCLDELYEIMYSCWRTDPL 291
Query: 202 QRPTFPSIVTQL 213
            RPTF  +  QL
Sbjct: 292 DRPTFSVLRLQL 303

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score =  103 bits (256), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
             T Q + M   V   +E++  K+ +H+D+AARNCL++    VK+S  GLS+     EY 
Sbjct: 102 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 161
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
               +  P+RW P E +   +FS+KSD++A+  L+WEI++ G+MP+   ++ +    + +
Sbjct: 162 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 220
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           + L         E + ++   C H    +RPTF  +++ + D M
Sbjct: 221 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 264

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score =  103 bits (256), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R  SL  +  +  AYQ++  L ++  KR +H+DIAARN L+SS+  VK+   GLS+    
Sbjct: 109 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             YYK     LP++W+  E++    F++ SDV+ +   +WEI   G  PF  + ++ V+ 
Sbjct: 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 228
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           ++E+ +         P  + SL  KC    P +RP F  +  QLS
Sbjct: 229 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R  SL  +  +  AYQ++  L ++  KR +H+DIAARN L+SS+  VK+   GLS+    
Sbjct: 132 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 191
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             YYK     LP++W+  E++    F++ SDV+ +   +WEI   G  PF  + ++ V+ 
Sbjct: 192 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 251
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           ++E+ +         P  + SL  KC    P +RP F  +  QLS
Sbjct: 252 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 295

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R  SL  +  +  AYQ++  L ++  KR +H+DIAARN L+SS+  VK+   GLS+    
Sbjct: 106 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 165
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             YYK     LP++W+  E++    F++ SDV+ +   +WEI   G  PF  + ++ V+ 
Sbjct: 166 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 225
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           ++E+ +         P  + SL  KC    P +RP F  +  QLS
Sbjct: 226 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 269

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R  SL  +  +  AYQ++  L ++  KR +H+DIAARN L+SS+  VK+   GLS+    
Sbjct: 104 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 163
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             YYK     LP++W+  E++    F++ SDV+ +   +WEI   G  PF  + ++ V+ 
Sbjct: 164 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 223
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           ++E+ +         P  + SL  KC    P +RP F  +  QLS
Sbjct: 224 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 267

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
             T Q + M   V   +E++  K+ +H+D+AARNCL++    VK+S  GLS+     EY 
Sbjct: 101 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 160
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
               +  P+RW P E +   +FS+KSD++A+  L+WEI++ G+MP+   ++ +    + +
Sbjct: 161 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 219
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           + L         E + ++   C H    +RPTF  +++ + D M
Sbjct: 220 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 263

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
             T Q + M   V   +E++  K+ +H+D+AARNCL++    VK+S  GLS+     EY 
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
               +  P+RW P E +   +FS+KSD++A+  L+WEI++ G+MP+   ++ +    + +
Sbjct: 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 235
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           + L         E + ++   C H    +RPTF  +++ + D M
Sbjct: 236 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
             T Q + M   V   +E++  K+ +H+D+AARNCL++    VK+S  GLS+     EY 
Sbjct: 97  FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 156
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
               +  P+RW P E +   +FS+KSD++A+  L+WEI++ G+MP+   ++ +    + +
Sbjct: 157 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 215
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           + L         E + ++   C H    +RPTF  +++ + D M
Sbjct: 216 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 259

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R  SL  +  +  AYQ++  L ++  KR +H+DIAARN L+SS+  VK+   GLS+    
Sbjct: 107 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 166
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             YYK     LP++W+  E++    F++ SDV+ +   +WEI   G  PF  + ++ V+ 
Sbjct: 167 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 226
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           ++E+ +         P  + SL  KC    P +RP F  +  QLS
Sbjct: 227 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 270

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R  SL  +  +  AYQ++  L ++  KR +H+DIAARN L+SS+  VK+   GLS+    
Sbjct: 104 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 163
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             YYK     LP++W+  E++    F++ SDV+ +   +WEI   G  PF  + ++ V+ 
Sbjct: 164 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 223
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           ++E+ +         P  + SL  KC    P +RP F  +  QLS  +
Sbjct: 224 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 270

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
             T Q + M   V   +E++  K+ +H+D+AARNCL++    VK+S  GLS+     EY 
Sbjct: 108 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 167
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
               +  P+RW P E +   +FS+KSD++A+  L+WEI++ G+MP+   ++ +    + +
Sbjct: 168 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 226
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           + L         E + ++   C H    +RPTF  +++ + D M
Sbjct: 227 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 270

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R  SL  +  +  AYQ++  L ++  KR +H+DIAARN L+SS+  VK+   GLS+    
Sbjct: 101 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 160
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             YYK     LP++W+  E++    F++ SDV+ +   +WEI   G  PF  + ++ V+ 
Sbjct: 161 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 220
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           ++E+ +         P  + SL  KC    P +RP F  +  QLS
Sbjct: 221 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 264

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 91/168 (54%), Gaps = 5/168 (2%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L+    +  AYQVA G+E +  K  +H+D+AARN L++    VKI   GL++D      Y
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 114 KYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
             R NA LP++W+  E++F+  ++ KSDV++Y  L+WEIF+ G  P+P +  D    +L 
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLI 288
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVT----QLSDA 216
                        E I  + + C      +RP+FP++ +    QL+DA
Sbjct: 289 QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
           +LST   +  + QVA G+  ++ K  IH+D+AARN L+++    KI   GL++D      
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 113 YKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y  + NA LP++W+  E++FD  ++ +SDV++Y  L+WEIF+ G  P+P +  +    +L
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
                     +  P+ I S+ + C    P  RPTF  I + L +    D
Sbjct: 280 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R  SL  +  +  AYQ++  L ++  KR +H+DIAARN L+SS+  VK+   GLS+    
Sbjct: 484 RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             YYK     LP++W+  E++    F++ SDV+ +   +WEI   G  PF  + ++ V+ 
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 603
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           ++E+ +         P  + SL  KC    P +RP F  +  QLS
Sbjct: 604 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score =  100 bits (250), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R  SL  +  +  AYQ++  L ++  KR +H+DIAARN L+S+   VK+   GLS+    
Sbjct: 104 RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 163
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             YYK     LP++W+  E++    F++ SDV+ +   +WEI   G  PF  + ++ V+ 
Sbjct: 164 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 223
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           ++E+ +         P  + SL  KC    P +RP F  +  QLS
Sbjct: 224 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 267

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score =  100 bits (249), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
           + ST   +  + QVA G+  ++ K  IH+D+AARN L+++    KI   GL++D      
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 113 YKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y  + NA LP++W+  E++FD  ++ +SDV++Y  L+WEIF+ G  P+P +  +    +L
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
                     +  P+ I S+ + C    P  RPTF  I + L +    D
Sbjct: 280 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score =  100 bits (249), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 1/168 (0%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           LS+   +  + QVA G+  ++ K  IH+D+AARN L+++    KI   GL++D      Y
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 114 KYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
             + NA LP++W+  E++FD  ++ +SDV++Y  L+WEIF+ G  P+P +  +    +L 
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 282
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
                    +  P+ I S+ + C    P  RPTF  I + L +    D
Sbjct: 283 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 330

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 239
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R  SL  +  +  AYQ++  L ++  KR +H+DIAARN L+S+   VK+   GLS+    
Sbjct: 484 RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 543
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             YYK     LP++W+  E++    F++ SDV+ +   +WEI   G  PF  + ++ V+ 
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 603
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           ++E+ +         P  + SL  KC    P +RP F  +  QLS
Sbjct: 604 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R L     +  + QVA G+  ++ K  IH+D+AARN L+++    KI   GL++D     
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 112 YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
            Y  + NA LP++W+  E++FD  ++ +SDV++Y  L+WEIF+ G  P+P +  +    +
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 272
Query: 171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
           L          +  P+ I S+ + C    P  RPTF  I + L +    D
Sbjct: 273 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 322

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 239
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 234
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 1/158 (0%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + +S    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      
Sbjct: 106 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y  +  A  P++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   L
Sbjct: 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
           E K    +     PE +  L   C   +P  RP+F  I
Sbjct: 226 E-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 236
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEI 264

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 234
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 234
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 234
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R L     +  + QVA G+  ++ K  IH+D+AARN L+++    KI   GL++D     
Sbjct: 155 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 214
Query: 112 YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
            Y  + NA LP++W+  E++FD  ++ +SDV++Y  L+WEIF+ G  P+P +  +    +
Sbjct: 215 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 274
Query: 171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
           L          +  P+ I S+ + C    P  RPTF  I + L +    D
Sbjct: 275 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 324

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 129 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 188
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 247
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 248 EGCPEKVYELMRACWQWNPSDRPSFAEI 275

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 234
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 120 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 238
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 239 EGCPEKVYELMRACWQWNPSDRPSFAEI 266

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R L     +  + QVA G+  ++ K  IH+D+AARN L+++    KI   GL++D     
Sbjct: 147 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 206
Query: 112 YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
            Y  + NA LP++W+  E++FD  ++ +SDV++Y  L+WEIF+ G  P+P +  +    +
Sbjct: 207 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 266
Query: 171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
           L          +  P+ I S+ + C    P  RPTF  I + L +    D
Sbjct: 267 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 316

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 239
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
             T Q + M   V   +E++  K+ +H+D+AARNCL++    VK+S  GLS+     E  
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEET 176
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
               +  P+RW P E +   +FS+KSD++A+  L+WEI++ G+MP+   ++ +    + +
Sbjct: 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 235
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           + L         E + ++   C H    +RPTF  +++ + D M
Sbjct: 236 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 239
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 236
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEI 264

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      +  +  A  P
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP 173
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-KDYRMERP 232
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 233 EGCPEKVYELMRACWQWNPSDRPSFAEI 260

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L  SQ + M Y V  G+  +   + IH+D+AARNCL+  DL VK+S  G+++     +
Sbjct: 99  KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y        P++W   E     ++S+KSDV+A+  L+WE+F+ G+MP+   ++ +V+ ++
Sbjct: 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV 218
Query: 172 -ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
            +  +L   H +   + I  +   C H  P +RPTF  +++ +
Sbjct: 219 SQGHRLYRPHLAS--DTIYQIMYSCWHELPEKRPTFQQLLSSI 259

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+++AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 323 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 382
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 441
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 442 EGCPEKVYELMRACWQWNPSDRPSFAEI 469

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+++AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 362 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 421
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 422 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 480
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 481 EGCPEKVYELMRACWQWNPSDRPSFAEI 508

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y     A  P
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 176
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 235
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEI 263

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 97.8 bits (242), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y     A  P
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 177
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 236
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEI 264

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 97.8 bits (242), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+         +  A  P
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-KDYRMERP 232
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 233 EGCPEKVYELMRACWQWNPSDRPSFAEI 260

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+         +  A  P
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-KDYRMERP 232
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 233 EGCPEKVYELMRACWQWNPSDRPSFAEI 260

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 96  PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 155
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             EY     A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 156 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 215
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 216 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 261

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 107 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 166
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             EY     A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 167 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 227 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 272

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 106 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 165
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             EY     A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 166 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 225
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 226 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 271

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             EY     A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 221 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 97.1 bits (240), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 111 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 170
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             EY     A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 171 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 230
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 231 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 276

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 97.1 bits (240), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+         +  A  P
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 180
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 239
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 96.7 bits (239), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V MA Q+A G+ ++     +H+D+AA N L+  +L  K++  GL++     E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y   + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 96.7 bits (239), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+         +  A  P
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 176
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 235
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
              PE +  L   C   +P  RP+F  I
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEI 263

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 96.7 bits (239), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
           SL  +  +  AYQ++  L ++  KR +H+DIAARN L+SS+  VK+   GLS+       
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTX 166
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
            K     LP++W+  E++    F++ SDV+ +   +WEI   G  PF  + ++ V+ ++E
Sbjct: 167 XKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           + +         P  + SL  KC    P +RP F  +  QLS
Sbjct: 227 NGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 267

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+++ A N L+S  LS KI+  GL++   
Sbjct: 97  PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIE 156
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             EY     A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 157 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 217 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 262

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E
Sbjct: 102 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 161
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y   + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 162 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 221
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 222 ERGYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 264

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 61  TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAI 119
           + +YQVA G+  ++ K  IH+D+AARN L++     KI   GL++D      Y  + NA 
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
           LP++W+  E++F+  ++ +SDV++Y   +WE+F+ G  P+P +  D    ++  +     
Sbjct: 225 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 284
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
                P  +  + + C    P +RPTF  IV  +   +    N
Sbjct: 285 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 327

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 61  TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAI 119
           + +YQVA G+  ++ K  IH+D+AARN L++     KI   GL++D      Y  + NA 
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
           LP++W+  E++F+  ++ +SDV++Y   +WE+F+ G  P+P +  D    ++  +     
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 268
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
                P  +  + + C    P +RPTF  IV  +   +    N
Sbjct: 269 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 61  TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAI 119
           + +YQVA G+  ++ K  IH+D+AARN L++     KI   GL++D      Y  + NA 
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
           LP++W+  E++F+  ++ +SDV++Y   +WE+F+ G  P+P +  D    ++  +     
Sbjct: 227 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 286
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
                P  +  + + C    P +RPTF  IV  +   +    N
Sbjct: 287 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 329

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 61  TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAI 119
           + +YQVA G+  ++ K  IH+D+AARN L++     KI   GL++D      Y  + NA 
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
           LP++W+  E++F+  ++ +SDV++Y   +WE+F+ G  P+P +  D    ++  +     
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 291
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
                P  +  + + C    P +RPTF  IV  +   +    N
Sbjct: 292 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 334

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y   + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y   + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     EY 
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
             + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+E 
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 174 --KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 397 GYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y   + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y   + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E
Sbjct: 98  KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 157
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y   + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 158 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 217
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 218 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 260

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           +  + Q+A G+  I  +  IH+D+ A N L+S+ L  KI+  GL++     EY     A 
Sbjct: 114 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 173
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +S+ +V+  LE +     
Sbjct: 174 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMP 232
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
                PE + ++  +C    P +RPTF  I + L D
Sbjct: 233 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 268

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     EY 
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
             + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+E 
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 174 --KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 397 GYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQ 109
            +  Q V M   +A G+++++D   +H+D+AARN L++S+L  K+S  GLS+    DT  
Sbjct: 132 FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 191
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             Y       +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ D+++  V++
Sbjct: 192 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 251
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
            +E +          P  +  L   C     + RP F  IV  L D M  + NS
Sbjct: 252 AIE-QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL-DKMIRNPNS 303

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y   + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           +  + Q+A G+  I  +  IH+D+ A N L+S+ L  KI+  GL++     EY     A 
Sbjct: 287 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 346
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +S+ +V+  LE +     
Sbjct: 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMP 405
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
                PE + ++  +C    P +RPTF  I + L D
Sbjct: 406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 441

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+      Y  +  A  P
Sbjct: 135 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFP 194
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
           ++W   E++  + FS KSDV+A+  L+WEI   G  P+P +   QV   LE K    +  
Sbjct: 195 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLE-KGYRMEQP 253
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTF 206
              P  +  L   C    P  RP+F
Sbjct: 254 EGCPPKVYELMRACWKWSPADRPSF 278

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
           +LS+ Q +  A  VA G++++S K+ IH+D+AARN L+  +   KI+  GLS+   Q+ Y
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG--QEVY 195
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
            K     LP+RW+  E++    ++T SDV++Y  L+WEI + G  P+  ++  ++  +L 
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 255
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
                 K  +   E +  L  +C    P++RP+F  I+  L+
Sbjct: 256 QGYRLEKPLNCDDE-VYDLMRQCWREKPYERPSFAQILVSLN 296

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y   + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
           +LS+ Q +  A  VA G++++S K+ IH+D+AARN L+  +   KI+  GLS+   Q+ Y
Sbjct: 128 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG--QEVY 185
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
            K     LP+RW+  E++    ++T SDV++Y  L+WEI + G  P+  ++  ++  +L 
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 245
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
                 K  +   E +  L  +C    P++RP+F  I+  L+
Sbjct: 246 QGYRLEKPLNCDDE-VYDLMRQCWREKPYERPSFAQILVSLN 286

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 102 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 161
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             E      A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 162 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 221
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 222 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 267

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     EY 
Sbjct: 360 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
             + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+E 
Sbjct: 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479
Query: 174 --KKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQLSD 215
             +  C       PE   SLH+   +C    P +RPTF  +   L D
Sbjct: 480 GYRMPC------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 94.4 bits (233), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     EY 
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
             + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+E 
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 174 --KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 397 GYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 94.4 bits (233), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E
Sbjct: 100 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 159
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y   + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 160 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 219
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 220 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 262

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 94.4 bits (233), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 110 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 169
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             E      A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 170 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 229
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 230 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 275

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             E      A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 161 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 221 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 103 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 162
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             E      A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 163 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 222
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 223 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 268

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             E      A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 161 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 221 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 109 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 168
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             E      A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 169 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 228
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 229 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 274

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 94.0 bits (232), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 107 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 166
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             E      A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 167 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 227 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 272

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 94.0 bits (232), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V M+ Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E
Sbjct: 106 KYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y   + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 166 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 226 ERGYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 94.0 bits (232), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL +     EY 
Sbjct: 278 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYT 337
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
             + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+E 
Sbjct: 338 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397
Query: 174 --KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 398 GYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 438

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 94.0 bits (232), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             E      A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V+
Sbjct: 161 DAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 221 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 93.6 bits (231), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 19/171 (11%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           RV++L     + M    A G+E++  K  IH+D+AARNCL++    +KIS  G+S++   
Sbjct: 211 RVKTL-----LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265
Query: 110 KEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             Y        +P++W   EA+    +S++SDV+++  L+WE F+ G  P+P+LS+ Q  
Sbjct: 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR 325
Query: 169 ------SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
                  +L   +LC       P+ +  L E+C    P QRP+F +I  +L
Sbjct: 326 EFVEKGGRLPCPELC-------PDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 11/169 (6%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQKEYY 113
           Q V M   +A G+ ++++   +H+D+AARN L++S+L  K+S  GLS+    ++    Y 
Sbjct: 117 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYT 176
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
                 +P+RW   EA+   +F++ SD ++Y  ++WE+ + GE P+ D+S+  V++ +E 
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ 236
Query: 174 KKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQLSDAMCN 219
                      P+  TSLH+    C     + RP FP +V+ L   + N
Sbjct: 237 D----YRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 281

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 93.2 bits (230), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R+L     V MA QVA G+ +I     IH+D+ + N L+ + L  KI+  GL++     E
Sbjct: 100 RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNE 159
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
               + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P +++ +VL Q+
Sbjct: 160 XTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV 219
Query: 172 ESKKLCWKHSSKTPEYI-TSLHEKCIH---PHPHQRPTFPSIVTQLSD 215
           E       +    P+    SLHE  IH     P +RPTF  + + L D
Sbjct: 220 ER-----GYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLED 262

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
           +LS+ Q +  A  VA G++++S K+ IH+++AARN L+  +   KI+  GLS+   Q+ Y
Sbjct: 135 TLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRG--QEVY 192
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
            K     LP+RW+  E++    ++T SDV++Y  L+WEI + G  P+  ++  ++  +L 
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 252
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
                 K  +   E +  L  +C    P++RP+F  I+  L+
Sbjct: 253 QGYRLEKPLNCDDE-VYDLMRQCWREKPYERPSFAQILVSLN 293

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V M+ Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E
Sbjct: 106 KYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           +   + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 166 WTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 226 ERGYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E  
Sbjct: 101 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT 160
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
             + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+E 
Sbjct: 161 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220
Query: 174 --KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 221 GYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 261

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 61  TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAI 119
           + +YQVA G+  ++ K  IH+D+AARN L++     KI   GL++       Y  + NA 
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
           LP++W+  E++F+  ++ +SDV++Y   +WE+F+ G  P+P +  D    ++  +     
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 291
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
                P  +  + + C    P +RPTF  IV  +   +    N
Sbjct: 292 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 334

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 6/170 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQKEYY 113
           Q V M   +A G+++++D   +H+ +AARN L++S+L  K+S  GLS+    DT    Y 
Sbjct: 110 QLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 169
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
                 +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ D+++  V++ +E 
Sbjct: 170 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE- 228
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
           +          P  +  L   C     + RP F  IV  L D M  + NS
Sbjct: 229 QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL-DKMIRNPNS 277

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GLS+  +   +  Y  
Sbjct: 148 QLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 5/166 (3%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
               + A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+
Sbjct: 169 XTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           E   +  C     + PE +  L  +C    P +RPTF  +   L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GLS+  +   +  Y  
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 238
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 239 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 92/173 (53%), Gaps = 23/173 (13%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---D 106
           RV++L     + M    A G+E++  K  IH+D+AARNCL++    +KIS  G+S+   D
Sbjct: 211 RVKTL-----LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265
Query: 107 TYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ 166
                    R   +P++W   EA+    +S++SDV+++  L+WE F+ G  P+P+LS+ Q
Sbjct: 266 GVXAASGGLRQ--VPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
Query: 167 VL------SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
                    +L   +LC       P+ +  L E+C    P QRP+F +I  +L
Sbjct: 324 TREFVEKGGRLPCPELC-------PDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GLS+  +   +  Y  
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 238
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 239 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GLS+  +   +  Y  
Sbjct: 136 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 255
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 256 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 298

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GLS+  +   +  Y  
Sbjct: 148 QLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
            +  Q V M   +  G++++SD   +H+D+AARN L++S+L  K+S  G+S+  +   + 
Sbjct: 128 FTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 187
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
            Y  R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ D+S+  V+  +
Sbjct: 188 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
           E +          P  +  L   C       RP F  IV  L D +  + NS
Sbjct: 248 E-EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML-DKLIRNPNS 297

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 3/168 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
            +  Q V M   ++ G++++SD   +H+D+AARN LI+S+L  K+S  GLS+  +   + 
Sbjct: 121 FTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 180
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
            Y  R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++++  V+  +
Sbjct: 181 AYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAV 240
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           E            P  +  L   C     + RP F  IV  L   + N
Sbjct: 241 EEGYRL-PSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRN 287

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
            +  Q V M   +A G+ +++D   +H+D+AARN L++S+L  K+S  GLS+  +   + 
Sbjct: 142 FTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEA 201
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
            Y      +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ D+S+  V+  +
Sbjct: 202 VYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
           E            P  +  L   C      +RP F  IV  L D M  + NS
Sbjct: 262 EEGYRL-PAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGIL-DKMIRNPNS 311

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GLS+  +   +  Y  
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GLS+  +   +  Y  
Sbjct: 146 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 205
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 206 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 265
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 266 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 308

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GLS+  +   +  Y  
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GLS+  +   +  Y  
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GLS+  +   +  Y  
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GLS+  +   +  Y  
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
            +  Q V M   +  G++++SD   +H+D+AARN L++S+L  K+S  G+S+  +   + 
Sbjct: 107 FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 166
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
            Y  R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ D+S+  V+  +
Sbjct: 167 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
           E            P  +  L   C       RP F  IV  L D +  + NS
Sbjct: 227 EEGYRL-PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML-DKLIRNPNS 276

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
            +  Q V M   +  G++++SD   +H+D+AARN L++S+L  K+S  G+S+  +   + 
Sbjct: 113 FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 172
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
            Y  R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ D+S+  V+  +
Sbjct: 173 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
           E            P  +  L   C       RP F  IV  L D +  + NS
Sbjct: 233 EEGYRL-PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML-DKLIRNPNS 282

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 90.5 bits (223), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++     +Y       
Sbjct: 109 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 168
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   E      +S+KSDV+++  L+WE+F++G++P+ + S+ +V+  + +    +K
Sbjct: 169 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 228
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
               +  ++  +   C    P  RP F  ++ QL++
Sbjct: 229 PRLAST-HVYQIMNHCWRERPEDRPAFSRLLRQLAE 263

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 90.5 bits (223), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++     +Y       
Sbjct: 106 LGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 165
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   E      +S+KSDV+++  L+WE+F++G++P+ + S+ +V+  + +    +K
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 225
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
               +  ++  +   C    P  RP F  ++ QL+
Sbjct: 226 PRLAST-HVYQIMNHCWKERPEDRPAFSRLLRQLA 259

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 90.5 bits (223), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++     +Y       
Sbjct: 107 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 166
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   E      +S+KSDV+++  L+WE+F++G++P+ + S+ +V+  + +    +K
Sbjct: 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 226
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
               +  ++  +   C    P  RP F  ++ QL++
Sbjct: 227 PRLAST-HVYQIMNHCWRERPEDRPAFSRLLRQLAE 261

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 90.5 bits (223), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 4/162 (2%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   V  G+ ++SD   +H+D+AARN L+ S+L  K+S  GLS+  +      Y  
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT 211
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
               +P+RW   EA+    FS+ SDV+++  ++WE+   GE P+ ++++  V+S +E + 
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE-EG 270
Query: 176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
                    P  +  L   C H    QRP F  IV+ L DA+
Sbjct: 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL-DAL 311

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++     +Y       
Sbjct: 106 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 165
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   E      +S+KSDV+++  L+WE+F++G++P+ + S+ +V+  + +    +K
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 225
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
               +  ++  +   C    P  RP F  ++ QL++
Sbjct: 226 PRLAST-HVYQIMNHCWKERPEDRPAFSRLLRQLAE 260

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++     +Y       
Sbjct: 126 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 185
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   E      +S+KSDV+++  L+WE+F++G++P+ + S+ +V+  + +    +K
Sbjct: 186 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 245
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
               +  ++  +   C    P  RP F  ++ QL++
Sbjct: 246 PRLAST-HVYQIMNHCWKERPEDRPAFSRLLRQLAE 280

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++     +Y       
Sbjct: 104 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 163
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   E      +S+KSDV+++  L+WE+F++G++P+ + S+ +V+  + +    +K
Sbjct: 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 223
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
               +  ++  +   C    P  RP F  ++ QL++
Sbjct: 224 PRLAST-HVYQIMNHCWKERPEDRPAFSRLLRQLAE 258

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GL +  +   +  Y  
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   +A G++++SD   +H+D+AARN LI+S+L  K+S  GL++  +   +  Y  
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
           R   +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ ++S+  V+  + E  
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +L        P  +  L   C     + RP F  IV+ L   + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 11/169 (6%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQKEYY 113
           Q V M   +A G+ ++++   +H+D+AARN L++S+L  K+S  GLS+    ++      
Sbjct: 119 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
                 +P+RW   EA+   +F++ SD ++Y  ++WE+ + GE P+ D+S+  V++ +E 
Sbjct: 179 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ 238
Query: 174 KKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQLSDAMCN 219
                      P+  TSLH+    C     + RP FP +V+ L   + N
Sbjct: 239 D----YRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 283

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
           SL     V  + Q+   + ++     +H+DIA RN L++S   VK+   GLS+    ++Y
Sbjct: 109 SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
           YK     LP++W+  E++    F+T SDV+ +A  +WEI + G+ PF  L +  V+  LE
Sbjct: 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE 228
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
                 K     P  + +L  +C    P  RP F  +V  LSD 
Sbjct: 229 KGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
           SL     V  + Q+   + ++     +H+DIA RN L++S   VK+   GLS+    ++Y
Sbjct: 121 SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 180
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
           YK     LP++W+  E++    F+T SDV+ +A  +WEI + G+ PF  L +  V+  LE
Sbjct: 181 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE 240
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
                 K     P  + +L  +C    P  RP F  +V  LSD 
Sbjct: 241 KGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 283

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
           SL     V  + Q+   + ++     +H+DIA RN L++S   VK+   GLS+    ++Y
Sbjct: 105 SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 164
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
           YK     LP++W+  E++    F+T SDV+ +A  +WEI + G+ PF  L +  V+  LE
Sbjct: 165 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE 224
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
                 K     P  + +L  +C    P  RP F  +V  LSD 
Sbjct: 225 KGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 267

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
            S  Q V M   +A G++++++   +H+D+AARN L++S+L  K+S  GLS+  +   + 
Sbjct: 144 FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 203
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
            Y      +P+RW   EA+   +F++ SDV+++  ++WE+   GE P+ +LS+ +V+  +
Sbjct: 204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
            +           P  I  L  +C      +RP F  IV+ L
Sbjct: 264 -NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
           Q V M   V  G+ ++SD   +H+D+AARN L+ S+L  K+S  GLS+  +         
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT 211
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
               +P+RW   EA+    FS+ SDV+++  ++WE+   GE P+ ++++  V+S +E + 
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE-EG 270
Query: 176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
                    P  +  L   C H    QRP F  IV+ L DA+
Sbjct: 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL-DAL 311

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 87.0 bits (214), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 66  VALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWL 125
           V   +E++     +H+D+AARN L+S D   K+S  GL+K+    +        LP++W 
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWT 353
Query: 126 PYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTP 185
             EA+ + +FSTKSDV+++  L+WEI++ G +P+P +    V+ ++E K          P
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCP 412
Query: 186 EYITSLHEKCIHPHPHQRPTFPSIVTQL 213
             +  + + C H     RPTF  +  QL
Sbjct: 413 PAVYDVMKNCWHLDAATRPTFLQLREQL 440

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 70  LEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEA 129
           +E++     +H+D+AARN L+S D   K+S  GL+K+    +        LP++W   EA
Sbjct: 130 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEA 185
Query: 130 VFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYIT 189
           + + +FSTKSDV+++  L+WEI++ G +P+P +    V+ ++E K          P  + 
Sbjct: 186 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVY 244
Query: 190 SLHEKCIHPHPHQRPTFPSIVTQL 213
            + + C H     RP+F  +  QL
Sbjct: 245 EVMKNCWHLDAAMRPSFLQLREQL 268

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           +  + Q+A G+ +I  K  IH+D+ A N L+S  L  KI+  GL++     EY     A 
Sbjct: 113 IDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAK 172
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   EA+    F+ KSDV+++  L++EI   G++P+P  ++  V++ L S+     
Sbjct: 173 FPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTAL-SQGYRMP 231
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
                P+ +  + + C      +RPTF  + + L D
Sbjct: 232 RVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDD 267

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 66  VALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWL 125
           V   +E++     +H+D+AARN L+S D   K+S  GL+K+    +        LP++W 
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWT 166
Query: 126 PYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTP 185
             EA+ + +FSTKSDV+++  L+WEI++ G +P+P +    V+ ++E K          P
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCP 225
Query: 186 EYITSLHEKCIHPHPHQRPTFPSIVTQL 213
             +  + + C H     RP+F  +  QL
Sbjct: 226 PAVYEVMKNCWHLDAAMRPSFLQLREQL 253

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           +  + Q+A G+  I  +  IH+D+ A N L+S+ L  KI+  GL++            A 
Sbjct: 281 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR----------VGAK 330
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +S+ +V+  LE +     
Sbjct: 331 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMP 389
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
                PE + ++  +C    P +RPTF  I + L D
Sbjct: 390 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 425

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 70  LEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEA 129
           +E++     +H+D+AARN L+S D   K+S  GL+K+    +        LP++W   EA
Sbjct: 121 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEA 176
Query: 130 VFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYIT 189
           + +  FSTKSDV+++  L+WEI++ G +P+P +    V+ ++E K          P  + 
Sbjct: 177 LREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVY 235
Query: 190 SLHEKCIHPHPHQRPTFPSIVTQL 213
            + + C H     RP+F  +  QL
Sbjct: 236 EVMKNCWHLDAAMRPSFLQLREQL 259

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
           +  + Q+A G+ +I  K  IH+D+ A N L+S  L  KI+  GL++     EY     A 
Sbjct: 112 IDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAK 171
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
            P++W   EA+    F+ KS+V+++  L++EI   G++P+P  ++  V+S L S+     
Sbjct: 172 FPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSAL-SQGYRMP 230
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
                P+ +  + + C      +RPTF  + + L D
Sbjct: 231 RMENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDD 266

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 84.7 bits (208), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R +     + + +QV++G++++ +   +H+D+AARN L+ +    KIS  GLSK     E
Sbjct: 106 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            YYK + +   P++W   E +   +FS+KSDV+++  L+WE F+ G+ P+  +   +V +
Sbjct: 166 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
            LE  +      +  P  +  L   C       RP F ++  +L +   + VN
Sbjct: 226 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 277

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 84.7 bits (208), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 3/174 (1%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R +     + + +QV++G++++ +   +H+D+AARN L+ +    KIS  GLSK     E
Sbjct: 102 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 161
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            YYK + +   P++W   E +   +FS+KSDV+++  L+WE F+ G+ P+  +   +V +
Sbjct: 162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 221
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
            LE  +      +  P  +  L   C       RP F ++  +L +   + VN 
Sbjct: 222 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 274

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 84.7 bits (208), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R +     + + +QV++G++++ +   +H+D+AARN L+ +    KIS  GLSK     E
Sbjct: 100 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 159
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            YYK + +   P++W   E +   +FS+KSDV+++  L+WE F+ G+ P+  +   +V +
Sbjct: 160 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 219
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
            LE  +      +  P  +  L   C       RP F ++  +L +   + VN
Sbjct: 220 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 271

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 3/174 (1%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R +     + + +QV++G++++ +   +H+D+AARN L+ +    KIS  GLSK     E
Sbjct: 112 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            YYK + +   P++W   E +   +FS+KSDV+++  L+WE F+ G+ P+  +   +V +
Sbjct: 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 231
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
            LE  +      +  P  +  L   C       RP F ++  +L +   + VN 
Sbjct: 232 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R +     + + +QV++G++++ +   +H+D+AARN L+ +    KIS  GLSK     E
Sbjct: 120 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 179
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            YYK + +   P++W   E +   +FS+KSDV+++  L+WE F+ G+ P+  +   +V +
Sbjct: 180 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 239
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
            LE  +      +  P  +  L   C       RP F ++  +L +   + VN
Sbjct: 240 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 291

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R +     + + +QV++G++++ +   +H+D+AARN L+ +    KIS  GLSK     E
Sbjct: 122 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            YYK + +   P++W   E +   +FS+KSDV+++  L+WE F+ G+ P+  +   +V +
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
            LE  +      +  P  +  L   C       RP F ++  +L +   + VN
Sbjct: 242 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 293

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R +     + + +QV++G++++ +   +H+D+AARN L+ +    KIS  GLSK     E
Sbjct: 122 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            YYK + +   P++W   E +   +FS+KSDV+++  L+WE F+ G+ P+  +   +V +
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
            LE  +      +  P  +  L   C       RP F ++  +L +   + VN
Sbjct: 242 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 293

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R +     + + +QV++G++++ +   +H+D+AARN L+ +    KIS  GLSK     E
Sbjct: 464 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            YYK + +   P++W   E +   +FS+KSDV+++  L+WE F+ G+ P+  +   +V +
Sbjct: 524 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 583
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
            LE  +      +  P  +  L   C       RP F ++  +L +   + VN
Sbjct: 584 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 635

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R +     + + +QV++G++++ +   +H+D+AARN L+ +    KIS  GLSK     E
Sbjct: 465 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 524
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            YYK + +   P++W   E +   +FS+KSDV+++  L+WE F+ G+ P+  +   +V +
Sbjct: 525 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 584
Query: 170 QLE--SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
            LE   +  C    +  P  +  L   C       RP F ++  +L +   + VN
Sbjct: 585 MLEKGERMGC---PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 636

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 83.6 bits (205), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Query: 63  AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE--YYKYRNAIL 120
           A QVA G+ ++  KR IH+D+AARN L+++   VKI   GL +   Q +  Y    +  +
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 186
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
           P  W   E++    FS  SD + +   +WE+F  G+ P+  L+  Q+L +++ +      
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
               P+ I ++  +C    P  RPTF ++   L +A   D+ +
Sbjct: 247 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA 289

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 83.6 bits (205), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Query: 63  AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE--YYKYRNAIL 120
           A QVA G+ ++  KR IH+D+AARN L+++   VKI   GL +   Q +  Y    +  +
Sbjct: 121 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
           P  W   E++    FS  SD + +   +WE+F  G+ P+  L+  Q+L +++ +      
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
               P+ I ++  +C    P  RPTF ++   L +A   D+ +
Sbjct: 241 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA 283

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
Query: 63  AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE--YYKYRNAIL 120
           A QVA G+ ++  KR IH+D+AARN L+++   VKI   GL +   Q +  Y    +  +
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
           P  W   E++    FS  SD + +   +WE+F  G+ P+  L+  Q+L +++ +      
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
               P+ I ++  +C    P  RPTF ++   L +A   D
Sbjct: 237 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 276

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R +     + + +QV++G++++ +   +H+D+AARN L+ +    KIS  GLSK     E
Sbjct: 106 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 112 --YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             Y    +   P++W   E +   +FS+KSDV+++  L+WE F+ G+ P+  +   +V +
Sbjct: 166 NXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
            LE  +      +  P  +  L   C       RP F ++  +L +   + VN
Sbjct: 226 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 277

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 60  VTMAYQVALGLEHISDKRL---IHKDIAARNCLI-----SSDLS---VKISLSGLSKDTY 108
           V  A Q+A G+ ++ D+ +   IH+D+ + N LI     + DLS   +KI+  GL+++ +
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH 167
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
           +        A     W+  E +    FS  SDV++Y  L+WE+   GE+PF  +    V 
Sbjct: 168 RTTKMSAAGA---YAWMAPEVIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGIDGLAVA 223
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
             +   KL     S  PE    L E C +P PH RP+F +I+ QL+
Sbjct: 224 YGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 63  AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE--YYKYRNAIL 120
           A QVA G+ ++  KR IH+D+AARN L+++   VKI   GL +   Q +  Y    +  +
Sbjct: 121 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
           P  W   E++    FS  SD + +   +WE+F  G+ P+  L+  Q+L +++ +      
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
               P+ I ++  +C    P  RPTF ++   L +A
Sbjct: 241 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 276

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 63  AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE--YYKYRNAIL 120
           A QVA G+ ++  KR IH+D+AARN L+++   VKI   GL +   Q +  Y    +  +
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
           P  W   E++    FS  SD + +   +WE+F  G+ P+  L+  Q+L +++ +      
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
               P+ I ++  +C    P  RPTF ++   L +A
Sbjct: 237 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Query: 63  AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKY--RNAIL 120
           A QVA G+ ++  KR IH+D+AARN L+++   VKI   GL +   Q + +     +  +
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 186
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
           P  W   E++    FS  SD + +   +WE+F  G+ P+  L+  Q+L +++ +      
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
               P+ I ++  +C    P  RPTF ++   L +A   D+ +
Sbjct: 247 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA 289

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 80.5 bits (197), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 186
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 247 CTID-VYMIMRKCWMIDADSRPKFRELIIEFS 277

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 80.5 bits (197), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 244 CTID-VYMIMRKCWMIDADSRPKFRELIIEFS 274

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 80.5 bits (197), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 135 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 193
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 253
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 254 CTID-VYMIMRKCWMIDADSRPKFRELIIEFS 284

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 190
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 250
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 251 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 281

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 190
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 250
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 251 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 281

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 190
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 250
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 251 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 281

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 159 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 217
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 218 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 277
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 278 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 308

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 184
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 244
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 245 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 275

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 244 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 274

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           G L +FL+  R                +  S    + +QV++G++++ +K  +H+D+AAR
Sbjct: 94  GPLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAAR 139
Query: 87  NCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAI-LPLRWLPYEAVFDDEFSTKSDVYAY 144
           N L+ +    KIS  GLSK     + YY  R+A   PL+W   E +   +FS++SDV++Y
Sbjct: 140 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 199
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
              +WE  + G+ P+  +   +V++ +E  K   +   + P  + +L   C       RP
Sbjct: 200 GVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM-ECPPECPPELYALMSDCWIYKWEDRP 258
Query: 205 TFPSIVTQL 213
            F ++  ++
Sbjct: 259 DFLTVEQRM 267

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 244 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 274

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 150 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 208
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 209 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 268
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 269 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 299

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 186
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 247 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 277

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 186
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 247 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 277

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 184
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 244
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 245 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 275

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 185
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 246 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 276

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 244 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 274

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 131 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 189
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 249
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 250 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 280

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 185
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 246 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 276

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 119 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 177
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 237
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 238 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 268

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 187
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 247
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 248 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 278

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 244 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 274

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 122 QIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 180
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 181 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 240
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 241 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 271

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K     +KEY+      +P+
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 186
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 247 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 277

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 63  AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKY--RNAIL 120
           A QVA G+ ++  KR IH+D+AARN L+++   VKI   GL +   Q + +     +  +
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 176
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
           P  W   E++    FS  SD + +   +WE+F  G+ P+  L+  Q+L +++ +      
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
               P+ I ++  +C    P  RPTF ++   L +A
Sbjct: 237 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
           L +   +    Q+A G+ ++ D RL+H+D+AARN L+ S   VKI+  GL++  D  + E
Sbjct: 116 LGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y+     + P++W+  E++    F+ +SDV++Y   +WE+   G  P+  +   ++   L
Sbjct: 176 YHADGGKV-PIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL 234
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           E  +   +    T + +  +  KC       RP F  +V++ S
Sbjct: 235 EKGERLPQPPICTID-VYMIMVKCWMIDSECRPRFRELVSEFS 276

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  G +K     +KEY+      +P+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPI 185
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 246 CTID-VYMIMRKCWMIDADSRPKFRELIIEFS 276

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  G +K     +KEY+      +P+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPI 185
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 246 CTID-VYMIMRKCWMIDADSRPKFRELIIEFS 276

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 16/151 (10%)
Query: 27  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           G L +FL+  R                +  S    + +QV++G++++ +K  +H+++AAR
Sbjct: 420 GPLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAAR 465
Query: 87  NCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAI-LPLRWLPYEAVFDDEFSTKSDVYAY 144
           N L+ +    KIS  GLSK     + YY  R+A   PL+W   E +   +FS++SDV++Y
Sbjct: 466 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 525
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
              +WE  + G+ P+  +   +V++ +E  K
Sbjct: 526 GVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 556

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  G +K     +KEY+      +P+
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPI 190
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 250
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 251 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 281

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 77.0 bits (188), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  G +K     +KEY+      +P+
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPI 187
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 247
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 248 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 278

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 77.0 bits (188), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  G +K     +KEY+      +P+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 244 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 274

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 77.0 bits (188), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  G +K     +KEY+      +P+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPI 185
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
           +W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE  +   +   
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            T + +  +  KC       RP F  ++ + S
Sbjct: 246 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 276

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ ++RL+H+D+AARN L+ S   VKI+  GL++  +  +KE Y      +P+
Sbjct: 148 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE-YNADGGKMPI 206
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
           +W+  E +   +F+ +SDV++Y   IWE+   G  P+  +   ++   LE
Sbjct: 207 KWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 256

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 6/153 (3%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
           Q+A G+ ++ ++RL+H+D+AARN L+ S   VKI+  GL++  +  +KE Y      +P+
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE-YNADGGKMPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE-SKKLCWKHS 181
           +W+  E +   +F+ +SDV++Y   IWE+   G  P+  +   ++   LE  ++L     
Sbjct: 184 KWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPI 243
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
                Y+  +  KC       RP F  +  + S
Sbjct: 244 CTIDVYMVMV--KCWMIDADSRPKFKELAAEFS 274

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTYQKEY 112
           L  S+ +  + Q+  G+E++  +R +H+D+AARN L+ S+  VKI+  GL+K     K+Y
Sbjct: 111 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 170
Query: 113 YKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL------ 162
           Y  R     P+ W   E++ D+ FS +SDV+++  +++E+F   +K   P  +       
Sbjct: 171 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGS 230
Query: 163 -SDDQVLSQLESKKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQL 213
             D   LS+L       +     P     +HE    C  P P  RP+F ++  QL
Sbjct: 231 ERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 285

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTYQKEY 112
           L  S+ +  + Q+  G+E++  +R +H+D+AARN L+ S+  VKI+  GL+K     K+Y
Sbjct: 124 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 183
Query: 113 YKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL------ 162
           Y  R     P+ W   E++ D+ FS +SDV+++  +++E+F   +K   P  +       
Sbjct: 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC 243
Query: 163 -SDDQVLSQLESKKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQL 213
             D   LS+L       +     P     +HE    C  P P  RP+F ++  QL
Sbjct: 244 ERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 298

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTYQKEY 112
           L  S+ +  + Q+  G+E++  +R +H+D+AARN L+ S+  VKI+  GL+K     K+Y
Sbjct: 112 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 171
Query: 113 YKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL------ 162
           Y  R     P+ W   E++ D+ FS +SDV+++  +++E+F   +K   P  +       
Sbjct: 172 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC 231
Query: 163 -SDDQVLSQLESKKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQL 213
             D   L +L       +     P     +HE    C  P P  RP+F ++  QL
Sbjct: 232 ERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 286

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 90/167 (53%), Gaps = 15/167 (8%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD----TYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  D +VKI   GL+ +    +   ++ + 
Sbjct: 123 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 183 SGSIL---WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMV 238
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
               L     K  S  P+ +  L  +C+     +RP+FP I+ ++ +
Sbjct: 239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 90/167 (53%), Gaps = 15/167 (8%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD----TYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  D +VKI   GL+ +    +   ++ + 
Sbjct: 123 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 183 SGSIL---WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMV 238
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
               L     K  S  P+ +  L  +C+     +RP+FP I+ ++ +
Sbjct: 239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 90/167 (53%), Gaps = 15/167 (8%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  D +VKI   GL    S+ +   ++ + 
Sbjct: 111 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQL 170
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 171 SGSIL---WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMV 226
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
               L     K  S  P+ +  L  +C+     +RP+FP I+ ++ +
Sbjct: 227 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 273

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+++A RN L+ ++  VKI   GL+K   Q KEYYK +     P+
Sbjct: 123 QICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI 182
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 183 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 242
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCND 220
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  +
Sbjct: 243 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAGE 297

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD----TYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  DL+VKI   GL+ +    +   ++ + 
Sbjct: 135 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 194
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 195 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 250
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
               L     K  S  P+ +  L  +C+     +RP FP I+  +
Sbjct: 251 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD----TYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  DL+VKI   GL+ +    +   ++ + 
Sbjct: 127 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 186
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 187 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 242
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
               L     K  S  P+ +  L  +C+     +RP FP I+  +
Sbjct: 243 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 287

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  DL+VKI   GL    S+ +   ++ + 
Sbjct: 135 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 194
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 195 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 250
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
               L     K  S  P+ +  L  +C+     +RP FP I+  +
Sbjct: 251 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  DL+VKI   GL    S+ +   ++ + 
Sbjct: 134 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 193
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 194 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 249
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
               L     K  S  P+ +  L  +C+     +RP FP I+  +
Sbjct: 250 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 294

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD----TYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  DL+VKI   GL+ +    +   ++ + 
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 166
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 167 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 222
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
               L     K  S  P+ +  L  +C+     +RP FP I+  +
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  DL+VKI   GL    S+ +   ++ + 
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 172 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 227
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
               L     K  S  P+ +  L  +C+     +RP FP I+  +
Sbjct: 228 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 272

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  DL+VKI   GL    S+ +   ++ + 
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 172 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 227
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
               L     K  S  P+ +  L  +C+     +RP FP I+  +
Sbjct: 228 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 272

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  DL+VKI   GL    S+ +   ++ + 
Sbjct: 109 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 168
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 169 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 224
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
               L     K  S  P+ +  L  +C+     +RP FP I+  +
Sbjct: 225 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 269

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  DL+VKI   GL    S+ +   ++ + 
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 166
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 167 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 222
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
               L     K  S  P+ +  L  +C+     +RP FP I+  +
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
           + +A Q A G++++  K +IH+D+ + N  +  DL+VKI   GL    S+ +   ++ + 
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 166
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
             +IL   W+  E +     + +S +SDVYA+  +++E+   G++P+ ++++ DQ++  +
Sbjct: 167 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 222
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
               L     K  S  P+ +  L  +C+     +RP FP I+  +
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 19/174 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE++K +     P+
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  
Sbjct: 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTYQKEY 112
           L  S+ +  + Q+  G+E++  +R +H+D+AARN L+ S+  VKI+  GL+K     K+ 
Sbjct: 108 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDX 167
Query: 113 YKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL------ 162
              R     P+ W   E++ D+ FS +SDV+++  +++E+F   +K   P  +       
Sbjct: 168 XVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC 227
Query: 163 -SDDQVLSQLESKKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQL 213
             D   L +L       +     P     +HE    C  P P  RP+F ++  QL
Sbjct: 228 ERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 282

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG----LSKDTY 108
           +L     +    Q+A G+ ++ +  ++H+++AARN L+ S   V+++  G    L  D  
Sbjct: 111 ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
           Q     Y  A  P++W+  E++   +++ +SDV++Y   +WE+   G  P+  L   +V 
Sbjct: 171 Q---LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP 227
Query: 169 SQLE-SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
             LE  ++L          Y+  +  KC     + RPTF  +  + +
Sbjct: 228 DLLEKGERLAQPQICTIDVYMVMV--KCWMIDENIRPTFKELANEFT 272

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG----LSKDTY 108
           +L     +    Q+A G+ ++ +  ++H+++AARN L+ S   V+++  G    L  D  
Sbjct: 129 ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 188
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
           Q     Y  A  P++W+  E++   +++ +SDV++Y   +WE+   G  P+  L   +V 
Sbjct: 189 Q---LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP 245
Query: 169 SQLE-SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
             LE  ++L          Y+  +  KC     + RPTF  +  + +
Sbjct: 246 DLLEKGERLAQPQICTIDVYMVMV--KCWMIDENIRPTFKELANEFT 290

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           L   + ++MAY VA G+ ++ ++   ++H+D+ + N L+    +VK+   GLS+      
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASX 192
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           +   + A     W+  E + D+  + KSDVY++  ++WE+    + P+ +L+  QV++ +
Sbjct: 193 FLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVVAAV 251
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
             K    +        + ++ E C    P +RP+F +I+  L
Sbjct: 252 GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 153 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 212
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 213 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  
Sbjct: 273 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMAG 326

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 126 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 185
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 186 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 245
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCNDV 221
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M   V
Sbjct: 246 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAGLV 301

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  
Sbjct: 245 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  
Sbjct: 245 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  
Sbjct: 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 129 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 188
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 189 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 248
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  
Sbjct: 249 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 302

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  
Sbjct: 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295

>pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 259
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  
Sbjct: 260 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 313

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  
Sbjct: 245 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 120 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 179
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 180 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 239
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  
Sbjct: 240 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMAG 293

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 127 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 186
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 187 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 246
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  
Sbjct: 247 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 300

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 128 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 187
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 188 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 247
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M  
Sbjct: 248 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 301

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 15/167 (8%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
           Q + +A Q A G++++  K +IH+D+ + N  +   L+VKI   GL+  T +  +   + 
Sbjct: 133 QLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA--TVKSRWSGSQQ 190
Query: 118 AILP---LRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQ 170
              P   + W+  E +    ++ FS +SDVY+Y  +++E+   GE+P+  +++ DQ++  
Sbjct: 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT-GELPYSHINNRDQIIFM 249
Query: 171 L----ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
           +     S  L  K     P+ +  L   C+     +RP FP I++ +
Sbjct: 250 VGRGYASPDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI 295

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           L   + ++MAY VA G+ ++ ++   ++H+++ + N L+    +VK+   GLS+      
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR-LKAST 192
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           +   ++A     W+  E + D+  + KSDVY++  ++WE+    + P+ +L+  QV++ +
Sbjct: 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVVAAV 251
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
             K    +        + ++ E C    P +RP+F +I+  L
Sbjct: 252 GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 121 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 180
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 181 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 240
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMC 218
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M 
Sbjct: 241 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 293

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 19/172 (11%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
           Q+  G+E++  KR IH+D+A RN L+ ++  VKI   GL+K   Q KE  K +     P+
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
            W   E++ + +FS  SDV+++  +++E+F    K + P  +      +D Q       L
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 259
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAM 217
            +L             P+ I  +  +C + + +QRP+F  +   V Q+ D M
Sbjct: 260 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           PR  S+  +Q +  A Q+  G+ ++  +  IH+++AARN L+ +D  VKI   GL+K   
Sbjct: 110 PR-HSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 109 QK-EYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGE---------M 157
           +  EYY+ R +   P+ W   E + + +F   SDV+++   ++E+    +         +
Sbjct: 169 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 228
Query: 158 PFPDLSDDQV----LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
               ++  Q+    L++L  +        K P  +  L + C       RPTF +++
Sbjct: 229 ELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           PR  S+  +Q +  A Q+  G+ ++  +  IH+++AARN L+ +D  VKI   GL+K   
Sbjct: 110 PR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 109 QK-EYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGE---------M 157
           +  EYY+ R +   P+ W   E + + +F   SDV+++   ++E+    +         +
Sbjct: 169 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 228
Query: 158 PFPDLSDDQV----LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
               ++  Q+    L++L  +        K P  +  L + C       RPTF +++
Sbjct: 229 ELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           PR  S+  +Q +  A Q+  G+ ++  +  IH+D+AARN L+ +D  VKI   GL+K   
Sbjct: 127 PR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185
Query: 109 QK-EYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGE---------M 157
           +  E Y+ R +   P+ W   E + + +F   SDV+++   ++E+    +         +
Sbjct: 186 EGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 245
Query: 158 PFPDLSDDQV----LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
               ++  Q+    L++L  +        K P  +  L + C       RPTF +++
Sbjct: 246 ELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 57  SQAVTMAYQVALGLE--HISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 114
           SQAV  A  +A G+   H  +  +    + +R+ +I  D++ +IS++ + K ++Q     
Sbjct: 111 SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADV-KFSFQSPGRM 169
Query: 115 YRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           Y  A     W+  EA+    +D     +D++++A L+WE+  + E+PF DLS+ ++  ++
Sbjct: 170 YAPA-----WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTR-EVPFADLSNMEIGMKV 223
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
             + L          +++ L + C++  P +RP F  IV  L
Sbjct: 224 ALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPIL 265

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           PR   +  +Q +  A Q+  G+ ++  +  IH+ +AARN L+ +D  VKI   GL+K   
Sbjct: 104 PR-HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP 162
Query: 109 QK-EYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMP---FP 160
           +  EYY+ R +   P+ W   E + + +F   SDV+++   ++E+    +  + P   F 
Sbjct: 163 EGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFT 222
Query: 161 DL---SDDQV----LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
           +L   +  Q+    L++L  +        + P  I  L + C       RPTF ++V  L
Sbjct: 223 ELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 282
Query: 214 SDA 216
             A
Sbjct: 283 QTA 285

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           PR   +  +Q +  A Q+  G+ ++  +  IH+ +AARN L+ +D  VKI   GL+K   
Sbjct: 105 PR-HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP 163
Query: 109 QK-EYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMP---FP 160
           +  EYY+ R +   P+ W   E + + +F   SDV+++   ++E+    +  + P   F 
Sbjct: 164 EGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFT 223
Query: 161 DL---SDDQV----LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
           +L   +  Q+    L++L  +        + P  I  L + C       RPTF ++V  L
Sbjct: 224 ELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 283
Query: 214 SDA 216
             A
Sbjct: 284 QTA 286

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
            L  SQ     YQ+  G+ H    R++H+D+  +N LI+SD ++K++  GL++  +    
Sbjct: 115 GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPV 173
Query: 113 YKYRNAILPLRW-LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
             Y + ++ L +  P   +   ++ST  D+++  C+  E+   G+  FP ++DD  L ++
Sbjct: 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDDQLPKI 232
Query: 172 ES 173
            S
Sbjct: 233 FS 234

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
            L  SQ     YQ+  G+ H    R++H+D+  +N LI+SD ++K++  GL++  +    
Sbjct: 115 GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPV 173
Query: 113 YKYRNAILPLRW-LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
             Y + ++ L +  P   +   ++ST  D+++  C+  E+   G+  FP ++DD  L ++
Sbjct: 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDDQLPKI 232
Query: 172 ES 173
            S
Sbjct: 233 FS 234

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
           ++  Q +  A Q+  G++++  ++ +H+D+AARN L+ S+  VKI   GL+K  +T ++ 
Sbjct: 123 INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX 182
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF 152
                +   P+ W   E +   +F   SDV+++   + E+ 
Sbjct: 183 XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
           ++  Q +  A Q+  G++++  ++ +H+D+AARN L+ S+  VKI   GL+K  +T ++ 
Sbjct: 111 INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX 170
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF 152
                +   P+ W   E +   +F   SDV+++   + E+ 
Sbjct: 171 XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 57  SQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISS-DLSVKISLSGLSKDTYQKEYY 113
           S  + +   +ALG+E++ ++   ++H+D+ + N  + S D +  +        T Q+  +
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVH 181
Query: 114 KYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV--LS 169
                +   +W+  E +  +E  ++ K+D Y++A +++ I   GE PF + S  ++  ++
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT-GEGPFDEYSYGKIKFIN 240
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
            +  + L        P  + ++ E C    P +RP F  IV +LS+
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 57  SQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISS-----DLSVKISLSGLSKDTYQ 109
           S  + +   +ALG+E++ ++   ++H+D+ + N  + S      +  K++  GLS    Q
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----Q 177
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
           +  +     +   +W+  E +  +E  ++ K+D Y++A +++ I   GE PF + S  ++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT-GEGPFDEYSYGKI 236
Query: 168 --LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             ++ +  + L        P  + ++ E C    P +RP F  IV +LS+
Sbjct: 237 KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L  +   T+  ++  GL+++  +R IH+DI A N L+S    VK++  G++      +  
Sbjct: 113 LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 172
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
           +      P  W+  E +    +  K+D+++      E+  KGE P  DL   +VL  +  
Sbjct: 173 RNXFVGTPF-WMAPEVIKQSAYDFKADIWSLGITAIEL-AKGEPPNSDLHPMRVLFLIPK 230
Query: 174 KK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
                L  +HS    E++    E C++  P  RPT
Sbjct: 231 NSPPTLEGQHSKPFKEFV----EACLNKDPRFRPT 261

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 16/127 (12%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS--GLSKDTYQ---KEYYKYRNAI 119
           Q+   L ++ ++ + H+DI   N L S++ S +I L   GLSK+ Y+    EYY     +
Sbjct: 176 QIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYY----GM 231
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIW------EIFNKGEMPFPDLSDDQVLSQLES 173
                 PY  V  +  +T ++ Y   C  W       +   G +PFP ++D   +SQ+ +
Sbjct: 232 TTKAGTPY-FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN 290
Query: 174 KKLCWKH 180
           KKLC+++
Sbjct: 291 KKLCFEN 297

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           LS   A+    Q+  G++H  D R++H+DI  +N LI S+ ++KI   G++K   +    
Sbjct: 108 LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
           +  + +  +++   E    +     +D+Y+   +++E+   GE PF
Sbjct: 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML-VGEPPF 212

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--------VKISLSGLSKDTYQKE 111
           + +A Q+A  +  + +  LIH ++ A+N L+  +          +K+S  G+S     K+
Sbjct: 116 LEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
Query: 112 YYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
             + R     + W+P E + +    +  +D +++   +WEI + G+ P   L   + L  
Sbjct: 176 ILQER-----IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF 230
Query: 171 LESKKLCWKHSSKTPEY--ITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDV 221
            E      +H    P+   + +L   C+   P  RP+F +I+  L+     D+
Sbjct: 231 YED-----RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--------VKISLSGLSKDTYQKE 111
           + +A Q+A  +  + +  LIH ++ A+N L+  +          +K+S  G+S     K+
Sbjct: 116 LEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
Query: 112 YYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
             + R     + W+P E + +    +  +D +++   +WEI + G+ P   L   + L  
Sbjct: 176 ILQER-----IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF 230
Query: 171 LESKKLCWKHSSKTPEY--ITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDV 221
            E      +H    P+   + +L   C+   P  RP+F +I+  L+     D+
Sbjct: 231 YED-----RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
           Q+   LEH+  +R++H+DI   N  I++   VK+   GL +    K    +     P   
Sbjct: 144 QLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYM 203
Query: 125 LPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEMPFPDLSDDQVLSQLESKKLCW 178
            P E + ++ ++ KSD+++  CL++E+      F   +M    L   + + Q +   L  
Sbjct: 204 SP-ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPS 260
Query: 179 KHSSKTPEYITSLHEKCIHPHPHQRP 204
            H S   E +  L   CI+P P +RP
Sbjct: 261 DHYS---EELRQLVNMCINPDPEKRP 283

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 57  SQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISS-DLSVKISLSGLSKDTYQKEYY 113
           S  + +   +ALG+E++ ++   ++H+D+ + N  + S D +  +          Q+  +
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH 181
Query: 114 KYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV--LS 169
                +   +W+  E +  +E  ++ K+D Y++A +++ I   GE PF + S  ++  ++
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT-GEGPFDEYSYGKIKFIN 240
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
            +  + L        P  + ++ E C    P +RP F  IV +LS+
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L  +Q  T+  ++  GL+++  ++ IH+DI A N L+S    VK++  G++      +  
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
           +      P  W+  E +    + +K+D+++      E+  +GE P  +L   +VL  +  
Sbjct: 176 RNXFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-ARGEPPHSELHPMKVLFLIPK 233
Query: 174 KK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
                L   +S    E++    E C++  P  RPT
Sbjct: 234 NNPPTLEGNYSKPLKEFV----EACLNKEPSFRPT 264

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L  +Q  T+  ++  GL+++  ++ IH+DI A N L+S    VK++  G++      +  
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 180
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
           +      P  W+  E +    + +K+D+++      E+  +GE P  +L   +VL  +  
Sbjct: 181 RNTFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-ARGEPPHSELHPMKVLFLIPK 238
Query: 174 KK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
                L   +S    E++    E C++  P  RPT
Sbjct: 239 NNPPTLEGNYSKPLKEFV----EACLNKEPSFRPT 269

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L  +Q  T+  ++  GL+++  ++ IH+DI A N L+S    VK++  G++      +  
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
           +      P  W+  E +    + +K+D+++      E+  +GE P  +L   +VL  +  
Sbjct: 161 RNXFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-ARGEPPHSELHPMKVLFLIPK 218
Query: 174 KK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
                L   +S    E++    E C++  P  RPT
Sbjct: 219 NNPPTLEGNYSKPLKEFV----EACLNKEPSFRPT 249

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R       Q  TM  ++  GL+++  ++ IH+DI A N L+S    VK++  G++     
Sbjct: 113 RAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 172
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            +  +      P  W+  E +    + +K+D+++      E+  KGE P  D+   +VL 
Sbjct: 173 TQIKRNTFVGTPF-WMAPEVIQQSAYDSKADIWSLGITAIEL-AKGEPPNSDMHPMRVLF 230
Query: 170 QLESKK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            +       L    +    E+I    + C++  P  RPT
Sbjct: 231 LIPKNNPPTLVGDFTKSFKEFI----DACLNKDPSFRPT 265

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L  +Q  T+  ++  GL+++  ++ IH+DI A N L+S    VK++  G++      +  
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
           +      P  W+  E +    + +K+D+++      E+  +GE P  +L   +VL  +  
Sbjct: 161 RNTFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-ARGEPPHSELHPMKVLFLIPK 218
Query: 174 KK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
                L   +S    E++    E C++  P  RPT
Sbjct: 219 NNPPTLEGNYSKPLKEFV----EACLNKEPSFRPT 249

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
            L +  A +   Q+  G+ +  D+R++H+D+  +N LI+ +  +KI+  GL++  +    
Sbjct: 96  GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPV 154
Query: 113 YKYRNAILPLRW-LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQ---- 166
            KY + I+ L +  P   +   ++ST  D+++  C+  E+ N G   FP +S+ DQ    
Sbjct: 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRI 213
Query: 167 --VLSQLESKKLCWKHSSKTPEY 187
             +L    SK   W + ++ P+Y
Sbjct: 214 FRILGTPNSKN--WPNVTELPKY 234

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
            L +  A +   Q+  G+ +  D+R++H+D+  +N LI+ +  +KI+  GL++  +    
Sbjct: 96  GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPV 154
Query: 113 YKYRNAILPLRW-LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQ---- 166
            KY + ++ L +  P   +   ++ST  D+++  C+  E+ N G   FP +S+ DQ    
Sbjct: 155 RKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GAPLFPGVSEADQLMRI 213
Query: 167 --VLSQLESKKLCWKHSSKTPEY 187
             +L    SK   W + ++ P+Y
Sbjct: 214 FRILGTPNSKN--WPNVTELPKY 234

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
            L +  A +   Q+  G+ +  D+R++H+D+  +N LI+ +  +KI+  GL++  +    
Sbjct: 96  GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPV 154
Query: 113 YKYRNAILPLRW-LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQ---- 166
            KY + ++ L +  P   +   ++ST  D+++  C+  E+ N G   FP +S+ DQ    
Sbjct: 155 RKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRI 213
Query: 167 --VLSQLESKKLCWKHSSKTPEY 187
             +L    SK   W + ++ P+Y
Sbjct: 214 FRILGTPNSKN--WPNVTELPKY 234

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
           Q+ L L+H+ D++++H+DI ++N  ++ D +V++   G+++          R  I    +
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR-VLNSTVELARACIGTPYY 191
Query: 125 LPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEM 157
           L  E   +  ++ KSD++A  C+++E+      F  G M
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM 230

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R ++L+  +A     Q+ LG +++   R+IH+D+   N  ++ DL VKI   GL+     
Sbjct: 132 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-- 189
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
            EY   R  +L     ++  E +     S + DV++  C+++ +   G+ PF      + 
Sbjct: 190 -EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKET 247
Query: 168 LSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
             +++      K+    P++I     SL +K +   P  RPT
Sbjct: 248 YLRIK------KNEYSIPKHINPVAASLIQKMLQTDPTARPT 283

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R ++L+  +A     Q+ LG +++   R+IH+D+   N  ++ DL VKI   GL+     
Sbjct: 134 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-- 191
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
            EY   R  +L     ++  E +     S + DV++  C+++ +   G+ PF      + 
Sbjct: 192 -EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKET 249
Query: 168 LSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
             +++      K+    P++I     SL +K +   P  RPT
Sbjct: 250 YLRIK------KNEYSIPKHINPVAASLIQKMLQTDPTARPT 285

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R ++L+  +A     Q+ LG +++   R+IH+D+   N  ++ DL VKI   GL+     
Sbjct: 108 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-- 165
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
            EY   R  +L     ++  E +     S + DV++  C+++ +   G+ PF      + 
Sbjct: 166 -EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKET 223
Query: 168 LSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
             +++      K+    P++I     SL +K +   P  RPT
Sbjct: 224 YLRIK------KNEYSIPKHINPVAASLIQKMLQTDPTARPT 259

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 34/172 (19%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  G+       +IH+DI   N L+S    VK+   G ++ T       Y + +   R
Sbjct: 131 FQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFAR-TLAAPGEVYDDEV-ATR 188
Query: 124 WL--PYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQV------------- 167
           W   P   V D ++    DV+A  CL+ E+F  GE  FP  SD DQ+             
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMF-MGEPLFPGDSDIDQLYHIMMCLGNLIPR 247
Query: 168 ---------------LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
                          L +++ ++   +   K  E +  L +KC+H  P +RP
Sbjct: 248 HQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
               ++AV  A ++  GLE +  +R++++D+   N L+     ++IS  GL+    + + 
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
            K R  +  + ++  E V ++ ++   D +A  CL++E+   G+ PF
Sbjct: 342 IKGR--VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI-AGQSPF 385

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
               ++AV  A ++  GLE +  +R++++D+   N L+     ++IS  GL+    + + 
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
            K R  +  + ++  E V ++ ++   D +A  CL++E+   G+ PF
Sbjct: 342 IKGR--VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI-AGQSPF 385

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 66/128 (51%), Gaps = 12/128 (9%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT--YQKEYYKYRNAILPL 122
           ++ALGL+H+    +I++D+   N L+  +  +K++  GLSK+   ++K+ Y +   +   
Sbjct: 138 ELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTV--- 194
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
            ++  E V     S  +D ++Y  L++E+   G +PF      Q   + E+  L  K   
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLT-GSLPF------QGKDRKETMTLILKAKL 247
Query: 183 KTPEYITS 190
             P+++++
Sbjct: 248 GMPQFLST 255

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 78  LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--ILPLRWLPYEAVFDDEF 135
           +IH+D+   N +IS+  +VK+   G+++          + A  I   ++L  E    D  
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
             +SDVY+  C+++E+   GE PF   S D V  Q
Sbjct: 197 DARSDVYSLGCVLYEVLT-GEPPFTGDSPDSVAYQ 230

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R ++L+  +A     Q+ LG +++   R+IH+D+   N  ++ DL VKI   GL+     
Sbjct: 110 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-- 167
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
            EY   R   L     ++  E +     S + DV++  C+++ +   G+ PF      + 
Sbjct: 168 -EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKET 225
Query: 168 LSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
             +++      K+    P++I     SL +K +   P  RPT
Sbjct: 226 YLRIK------KNEYSIPKHINPVAASLIQKMLQTDPTARPT 261

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R ++L+  +A     Q+ LG +++   R+IH+D+   N  ++ DL VKI   GL+     
Sbjct: 110 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-- 167
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
            EY   R   L     ++  E +     S + DV++  C+++ +   G+ PF      + 
Sbjct: 168 -EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKET 225
Query: 168 LSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
             +++      K+    P++I     SL +K +   P  RPT
Sbjct: 226 YLRIK------KNEYSIPKHINPVAASLIQKMLQTDPTARPT 261

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R ++L+  +A     Q+ LG +++   R+IH+D+   N  ++ DL VKI   GL+     
Sbjct: 114 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-- 171
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
            EY   R   L     ++  E +     S + DV++  C+++ +   G+ PF      + 
Sbjct: 172 -EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKET 229
Query: 168 LSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
             +++      K+    P++I     SL +K +   P  RPT
Sbjct: 230 YLRIK------KNEYSIPKHINPVAASLIQKMLQTDPTARPT 265

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P ++ LS  QA      +  G+E++  +++IH+DI   N L+  D  +KI+  G+S + +
Sbjct: 129 PTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE-F 187
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDE--FSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD 165
           +       N +    ++  E++ +    FS K+ DV+A    ++  F  G+ PF D    
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY-CFVFGQCPFMDERIM 246
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
            + S+++S+ L +       E +  L  + +  +P  R   P I
Sbjct: 247 CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI 290

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 24/175 (13%)
Query: 55  STSQAVTMAYQVALG---LEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQK 110
           + + A++   Q + G   L  +  K LIH+D+   N L+ +  +V KI   G + D    
Sbjct: 101 TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 160
Query: 111 EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
                 +A     W+  E      +S K DV+++  ++WE+  +   PF ++        
Sbjct: 161 MTNNKGSAA----WMAPEVFEGSNYSEKCDVFSWGIILWEVITR-RKPFDEIGGPAF--- 212
Query: 171 LESKKLCWKHSSKT--------PEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
               ++ W   + T        P+ I SL  +C    P QRP+   IV  ++  M
Sbjct: 213 ----RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 24/175 (13%)
Query: 55  STSQAVTMAYQVALG---LEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQK 110
           + + A++   Q + G   L  +  K LIH+D+   N L+ +  +V KI   G + D    
Sbjct: 100 TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159
Query: 111 EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
                 +A     W+  E      +S K DV+++  ++WE+  +   PF ++        
Sbjct: 160 MTNNKGSAA----WMAPEVFEGSNYSEKCDVFSWGIILWEVITR-RKPFDEIGGPAF--- 211
Query: 171 LESKKLCWKHSSKT--------PEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
               ++ W   + T        P+ I SL  +C    P QRP+   IV  ++  M
Sbjct: 212 ----RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--- 118
           M +Q+  GL+ +   R++H+D+  +N L++S   +K++  GL++       Y ++ A   
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMALTS 178
Query: 119 -ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
            ++ L +   E +    ++T  D+++  C+  E+F +
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 215

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 61  TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAIL 120
           +  +Q+  GL     + ++H+D+  +N LI+ +  +K++  GL++  +      Y   ++
Sbjct: 105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR-AFGIPVRCYSAEVV 163
Query: 121 PLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-----ESK 174
            L + P + +F  + +ST  D+++  C+  E+ N G   FP    D  L ++        
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 175 KLCWKHSSKTPEY 187
           +  W   +K P+Y
Sbjct: 224 EEQWPSMTKLPDY 236

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--- 118
           M +Q+  GL+ +   R++H+D+  +N L++S   +K++  GL++       Y ++ A   
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMALTS 178
Query: 119 -ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
            ++ L +   E +    ++T  D+++  C+  E+F +
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 215

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--- 118
           M +Q+  GL+ +   R++H+D+  +N L++S   +K++  GL++       Y ++ A   
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMALTS 178
Query: 119 -ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
            ++ L +   E +    ++T  D+++  C+  E+F +
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 215

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 78  LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--ILPLRWLPYEAVFDDEF 135
           +IH+D+   N LIS+  +VK+   G+++          + A  I   ++L  E    D  
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHE 193
             +SDVY+  C+++E+   GE PF   + D  +S      + ++H  + P   ++ HE
Sbjct: 197 DARSDVYSLGCVLYEVLT-GEPPF---TGDSPVS------VAYQHVREDPIPPSARHE 244

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 67  ALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--ILPLRW 124
           AL   H     +IH+D+   N +IS+  +VK+   G+++          + A  I   ++
Sbjct: 128 ALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 125 LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKT 184
           L  E    D    +SDVY+  C+++E+   GE PF   + D  +S      + ++H  + 
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPF---TGDSPVS------VAYQHVRED 235
Query: 185 PEYITSLHE 193
           P   ++ HE
Sbjct: 236 PIPPSARHE 244

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 35/158 (22%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+ +G++H+    +IH+D+   N ++ SD ++KI   GL+           R A   
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
               PY         E +    +    D+++  C++ E+  KG + FP        ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
            QL          + +PE++  L +  +  +   RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 21/171 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R   L    A+ +  Q+  G+++I  K+LIH+D+   N  +     VKI   GL   T  
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLV--TSL 186
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP------DLS 163
           K   K   +   LR++  E +   ++  + D+YA   ++ E+ +  +  F       DL 
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLR 246
Query: 164 DDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            D ++S +  KK              +L +K +   P  RP    I+  L+
Sbjct: 247 -DGIISDIFDKKE------------KTLLQKLLSKKPEDRPNTSEILRTLT 284

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 78  LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--ILPLRWLPYEAVFDDEF 135
           +IH+D+   N +IS+  +VK+   G+++          + A  I   ++L  E    D  
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHE 193
             +SDVY+  C+++E+   GE PF   + D  +S      + ++H  + P   ++ HE
Sbjct: 197 DARSDVYSLGCVLYEVLT-GEPPF---TGDSPVS------VAYQHVREDPIPPSARHE 244

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 78  LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--ILPLRWLPYEAVFDDEF 135
           +IH+D+   N +IS+  +VK+   G+++          + A  I   ++L  E    D  
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHE 193
             +SDVY+  C+++E+   GE PF   + D  +S      + ++H  + P   ++ HE
Sbjct: 197 DARSDVYSLGCVLYEVLT-GEPPF---TGDSPVS------VAYQHVREDPIPPSARHE 244

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 78  LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--ILPLRWLPYEAVFDDEF 135
           +IH+D+   N +IS+  +VK+   G+++          + A  I   ++L  E    D  
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHE 193
             +SDVY+  C+++E+   GE PF   + D  +S      + ++H  + P   ++ HE
Sbjct: 214 DARSDVYSLGCVLYEVLT-GEPPF---TGDSPVS------VAYQHVREDPIPPSARHE 261

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-----SDLSVKISLSGLSKDTYQKEY 112
           + +T+  Q   GL H+    ++H+D+   N LIS       +   IS  GL K      +
Sbjct: 119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178
Query: 113 YKYRNAILPLR--WLPYEAVFDD--EFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDDQV 167
              R + +P    W+  E + +D  E  T + D+++  C+ + + ++G  PF      Q 
Sbjct: 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA 238
Query: 168 LSQLESKKLCWKHSSKTPEYIT-SLHEKCIHPHPHQRPT 205
              L +  L   H  K  + I   L EK I   P +RP+
Sbjct: 239 NILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPS 277

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 57  SQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----------- 105
           SQ V+ A  +A G+ ++    +IH+D+ + NCL+  + +V ++  GL++           
Sbjct: 108 SQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167
Query: 106 -DTYQKEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
             + +K   K R  ++  P  W+  E +    +  K DV+++  ++ EI  +
Sbjct: 168 LRSLKKPDRKKRYTVVGNPY-WMAPEMINGRSYDEKVDVFSFGIVLCEIIGR 218

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 105
           R ++++  +A     Q   G++++ + R+IH+D+   N  ++ D+ VKI   GL+     
Sbjct: 119 RRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF 178
Query: 106 -DTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
               +K+     N I P      E +     S + D+++  C+++ +   G+ PF     
Sbjct: 179 DGERKKDLCGTPNYIAP------EVLCKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCL 231
Query: 165 DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF-PSIVTQLSD 215
            +   +++      K+    P +I  +    I    H  PT  PS+   L+D
Sbjct: 232 KETYIRIK------KNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 277

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           ++  Q  T+   V   L ++ ++ +IH+DI + + L++SD  +K+S  G       KE  
Sbjct: 138 MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV-SKEVP 196
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
           K +  +    W+  E +    + T+ D+++   ++ E+ + GE P+
Sbjct: 197 KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID-GEPPY 241

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 22/122 (18%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS------KDT 107
           L+     T+ Y + LG   I +  +IH+D+   NCL++ D SVK+   GL+      KDT
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
Query: 108 --------------YQKEYYKYRNAILPLRWL--PYEAVFDDEFSTKSDVYAYACLIWEI 151
                         + K   K   + +  RW   P   +  + ++   D+++  C+  E+
Sbjct: 186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
Query: 152 FN 153
            N
Sbjct: 246 LN 247

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+  G++H+    +IH+D+   N ++ SD ++KI   GL+           R A   
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
               PY         E +    +    D+++  C++ E+  KG + FP        ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
            QL          + +PE++  L +  +  +   RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+  G++H+    +IH+D+   N ++ SD ++KI   GL+           R A   
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
               PY         E +    +    D+++  C++ E+  KG + FP        ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
            QL          + +PE++  L +  +  +   RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+  G++H+    +IH+D+   N ++ SD ++KI   GL+           R A   
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
               PY         E +    +    D+++  C++ E+  KG + FP        ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
            QL          + +PE++  L +  +  +   RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+  G++H+    +IH+D+   N ++ SD ++KI   GL+           R A   
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
               PY         E +    +    D+++  C++ E+  KG + FP        ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
            QL          + +PE++  L +  +  +   RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           L+  Q  T+   V   L ++  + +IH+DI + + L++ D  VK+S  G       K+  
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI-SKDVP 196
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-E 172
           K +  +    W+  E +    ++T+ D+++   ++ E+ + GE P+   S  Q + +L +
Sbjct: 197 KRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD-GEPPYFSDSPVQAMKRLRD 255
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
           S     K+S K    +    E+ +   P +R T
Sbjct: 256 SPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT 288

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD--- 106
           +V      QAV  A ++++GL  +  + +I++D+   N ++ S+  +KI+  G+ K+   
Sbjct: 113 QVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM 172
Query: 107 --TYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
                +E+    + I P      E +    +    D +AY  L++E+   G+ PF    +
Sbjct: 173 DGVTTREFCGTPDYIAP------EIIAYQPYGKSVDWWAYGVLLYEML-AGQPPFDGEDE 225
Query: 165 DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
           D++   +    + +  S    +   S+ +  +  HP +R
Sbjct: 226 DELFQSIMEHNVSYPKS--LSKEAVSICKGLMTKHPAKR 262

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP--- 121
           Q   GL+ +    ++H+D+   N L++S  +VK++  GL++       Y Y+ A+ P   
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------IYSYQMALFPVVV 173
Query: 122 -LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
            L +   E +    ++T  D+++  C+  E+F +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 207

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 105
           R ++++  +A     Q   G++++ + R+IH+D+   N  ++ D+ VKI   GL+     
Sbjct: 135 RRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF 194
Query: 106 -DTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
               +K+     N I P      E +     S + D+++  C+++ +   G+ PF     
Sbjct: 195 DGERKKDLCGTPNYIAP------EVLCKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCL 247
Query: 165 DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF-PSIVTQLSD 215
            +   +++      K+    P +I  +    I    H  PT  PS+   L+D
Sbjct: 248 KETYIRIK------KNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 293

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R ++++  +A     Q   G++++ + R+IH+D+   N  ++ D+ VKI   GL+     
Sbjct: 135 RRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-- 192
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
            E+   R   L     ++  E +     S + D+++  C+++ +   G+ PF      + 
Sbjct: 193 -EFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCLKET 250
Query: 168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF-PSIVTQLSD 215
             +++      K+    P +I  +    I    H  PT  PS+   L+D
Sbjct: 251 YIRIK------KNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 293

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 67/149 (44%), Gaps = 17/149 (11%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+  G++H+    +IH+D+   N ++ SD ++KI   GL++       +     ++ 
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPEVVT 188
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVLSQLESKKLC 177
             +   E +    +    D+++  C++ E+  KG + FP        ++V+ QL      
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQL------ 241
Query: 178 WKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
               +  PE++  L +  +  +   RP +
Sbjct: 242 ---GTPCPEFMKKL-QPTVRTYVENRPKY 266

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R ++++  +A     Q   G++++ + R+IH+D+   N  ++ D+ VKI   GL+     
Sbjct: 135 RRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-- 192
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
            E+   R   L     ++  E +     S + D+++  C+++ +   G+ PF      + 
Sbjct: 193 -EFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCLKET 250
Query: 168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF-PSIVTQLSD 215
             +++      K+    P +I  +    I    H  PT  PS+   L+D
Sbjct: 251 YIRIK------KNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 293

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 175
Query: 124 WLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +   + +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 235 WPGVTSMPDY 244

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/152 (19%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+  G++H+    +IH+D+   N ++ SD ++KI   GL++       +     ++ 
Sbjct: 129 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN--FMMTPYVVT 186
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVLSQLESKKLC 177
             +   E +    +    D+++  C++ E+  KG + F         ++V+ QL      
Sbjct: 187 RYYRAPEVILGMGYKENVDIWSVGCIMGELV-KGSVIFQGTDHIDQWNKVIEQL------ 239
Query: 178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
               + + E++ +L +  +  +   RP +P I
Sbjct: 240 ---GTPSAEFMAAL-QPTVRNYVENRPAYPGI 267

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 168
Query: 124 WLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +   + +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 228 WPGVTSMPDY 237

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 61  TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAIL 120
           +  +Q+  GL     + ++H+D+  +N LI+ +  +K++  GL++  +      Y   ++
Sbjct: 105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR-AFGIPVRCYSAEVV 163
Query: 121 PLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-----ESK 174
            L + P + +F  + +ST  D+++  C+  E+ N     FP    D  L ++        
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 175 KLCWKHSSKTPEY 187
           +  W   +K P+Y
Sbjct: 224 EEQWPSMTKLPDY 236

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 35/158 (22%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+  G++H+    +IH+D+   N ++ SD ++KI   GL+           R A   
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 180
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
               PY         E +    +    D+++  C++ E+  KG + FP        ++V+
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 239
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
            QL          +  PE++  L +  +  +   RP +
Sbjct: 240 EQL---------GTPCPEFMKKL-QPTVRTYVENRPKY 267

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
           S+S  Q + +    A GL ++  + +IH+D+ + N L+  +   KI+  G+SK   + + 
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ 194
Query: 113 YKYRNAI-LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF 152
                 +   L ++  E       + KSDVY++  +++E+ 
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 35/158 (22%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+  G++H+    +IH+D+   N ++ SD ++KI   GL+           R A   
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
               PY         E +    +    D+++  C++ E+  KG + FP        ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
            QL          +  PE++  L +  +  +   RP +
Sbjct: 239 EQL---------GTPCPEFMKKL-QPTVRTYVENRPKY 266

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT--YQKEYYKYRNAILPL 122
           ++AL L+H+    +I++D+   N L+  +  +K++  GLSK++  ++K+ Y +   +   
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV--- 190
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
            ++  E V     +  +D +++  L++E+   G +PF      + ++ +   KL 
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMILKAKLG 244

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP--- 121
           Q   GL+ +    ++H+D+   N L++S  +VK++  GL++       Y Y+ A+ P   
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------IYSYQMALTPVVV 181
Query: 122 -LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
            L +   E +    ++T  D+++  C+  E+F +
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 215

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 33/123 (26%)
Query: 61  TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAIL 120
           T+ Y + +G++++    ++H+D+   NCL++ D SVK+   GL++     +Y +  N+ L
Sbjct: 160 TLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV---DYPENGNSQL 216
Query: 121 PL----------------------------RWL--PYEAVFDDEFSTKSDVYAYACLIWE 150
           P+                            RW   P   +  + ++   DV++  C+  E
Sbjct: 217 PISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAE 276
Query: 151 IFN 153
           + N
Sbjct: 277 LLN 279

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 25/125 (20%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT------ 107
           L+     T+ Y + LG + I +  +IH+D+   NCL++ D SVKI   GL++        
Sbjct: 128 LTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDI 187
Query: 108 -----------------YQKEYYKYRNAILPLRWL--PYEAVFDDEFSTKSDVYAYACLI 148
                            + K   K   + +  RW   P   +  + ++   D+++  C+ 
Sbjct: 188 HIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIF 247
Query: 149 WEIFN 153
            E+ N
Sbjct: 248 AELLN 252

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT--YQKEYYKYRNAILPL 122
           ++AL L+H+    +I++D+   N L+  +  +K++  GLSK++  ++K+ Y +   +   
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV--- 190
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
            ++  E V     +  +D +++  L++E+   G +PF      + ++ +   KL 
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMILKAKLG 244

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT--YQKEYYKYRNAILPL 122
           ++AL L+H+    +I++D+   N L+  +  +K++  GLSK++  ++K+ Y +   +   
Sbjct: 135 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV--- 191
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
            ++  E V     +  +D +++  L++E+   G +PF      + ++ +   KL 
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMILKAKLG 245

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP--- 121
           Q   GL+ +    ++H+D+   N L++S  +VK++  GL++       Y Y+ A+ P   
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------IYSYQMALAPVVV 173
Query: 122 -LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
            L +   E +    ++T  D+++  C+  E+F +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 207

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/161 (21%), Positives = 69/161 (42%), Gaps = 35/161 (21%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+  G++H+    +IH+D+   N ++ SD ++KI   GL+           R A   
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTACTN 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
               PY         E +    ++   D+++  C++ E+  KG + F         ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELV-KGCVIFQGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
            QL          + + E++ +L +  +  +   RP +P I
Sbjct: 239 EQL---------GTPSAEFMAAL-QPTVRNYVENRPKYPGI 269

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/159 (20%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY- 108
           +V       AV  A ++A+GL  +  K +I++D+   N ++ S+  +KI+  G+ K+   
Sbjct: 114 QVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173
Query: 109 ----QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
                K +    + I P      E +    +    D +A+  L++E+   G+ PF    +
Sbjct: 174 DGVTTKXFCGTPDYIAP------EIIAYQPYGKSVDWWAFGVLLYEML-AGQAPFEGEDE 226
Query: 165 DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
           D++   +    + +  S    +   ++ +  +  HP +R
Sbjct: 227 DELFQSIMEHNVAYPKS--MSKEAVAICKGLMTKHPGKR 263

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 69  GLEHISDKRLIHKDIAARNCLISSDLSVKIS-----LSGLSKDTYQK---EYYKYRNAIL 120
            L++I     +H+ + A + LIS D  V +S     LS +S    Q+   ++ KY   +L
Sbjct: 140 ALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL 199
Query: 121 PLRWLPYEAVFDD--EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV-LSQLESKKLC 177
           P  WL  E +  +   +  KSD+Y+      E+ N G +PF D+   Q+ L +L     C
Sbjct: 200 P--WLSPEVLQQNLQGYDAKSDIYSVGITACELAN-GHVPFKDMPATQMLLEKLNGTVPC 256
Query: 178 WKHSSKTP 185
              +S  P
Sbjct: 257 LLDTSTIP 264

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+  G++H+    +IH+D+   N ++ SD ++KI   GL+           R A   
Sbjct: 133 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 181
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
              +P+         E +    +    D+++  C++ E+  KG + FP        ++V+
Sbjct: 182 FMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 240
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
            QL          +  PE++  L +  +  +   RP +
Sbjct: 241 EQL---------GTPCPEFMKKL-QPTVRTYVENRPKY 268

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 69  GLEHISDKRLIHKDIAARNCLISSDLSVKIS-----LSGLSKDTYQK---EYYKYRNAIL 120
            L++I     +H+ + A + LIS D  V +S     LS +S    Q+   ++ KY   +L
Sbjct: 124 ALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL 183
Query: 121 PLRWLPYEAVFDD--EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV-LSQLESKKLC 177
           P  WL  E +  +   +  KSD+Y+      E+ N G +PF D+   Q+ L +L     C
Sbjct: 184 P--WLSPEVLQQNLQGYDAKSDIYSVGITACELAN-GHVPFKDMPATQMLLEKLNGTVPC 240
Query: 178 WKHSSKTP 185
              +S  P
Sbjct: 241 LLDTSTIP 248

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 171
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 231 WPGVTSMPDY 240

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 171
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 231 WPGVTSMPDY 240

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/137 (21%), Positives = 61/137 (44%), Gaps = 12/137 (8%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY- 108
           +V       AV  A ++A+GL  +  K +I++D+   N ++ S+  +KI+  G+ K+   
Sbjct: 435 QVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494
Query: 109 ----QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
                K +    + I P      E +    +    D +A+  L++E+   G+ PF    +
Sbjct: 495 DGVTTKXFCGTPDYIAP------EIIAYQPYGKSVDWWAFGVLLYEML-AGQAPFEGEDE 547
Query: 165 DQVLSQLESKKLCWKHS 181
           D++   +    + +  S
Sbjct: 548 DELFQSIMEHNVAYPKS 564

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 171
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 231 WPGVTSMPDY 240

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 172
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 178 WKHSSKTPEYITSL 191
           W   +  P+Y  S 
Sbjct: 232 WPGVTSMPDYKPSF 245

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 170
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 178 WKHSSKTPEYITSL 191
           W   +  P+Y  S 
Sbjct: 230 WPGVTSMPDYKPSF 243

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 21/171 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R   L    A+ +  Q+  G+++I  K+LI++D+   N  +     VKI   GL   T  
Sbjct: 115 RGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV--TSL 172
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP------DLS 163
           K   K   +   LR++  E +   ++  + D+YA   ++ E+ +  +  F       DL 
Sbjct: 173 KNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLR 232
Query: 164 DDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           D  ++S +  KK              +L +K +   P  RP    I+  L+
Sbjct: 233 DG-IISDIFDKKE------------KTLLQKLLSKKPEDRPNTSEILRTLT 270

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 167
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 227 WPGVTSMPDY 236

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 175
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 235 WPGVTSMPDY 244

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 169
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 229 WPGVTSMPDY 238

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 171
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 231 WPGVTSMPDY 240

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 170
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 230 WPGVTSMPDY 239

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI  +GL++  D 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 110 FQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 228 WPGVTSMPDY 237

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 228 WPGVTSMPDY 237

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 167
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 227 WPGVTSMPDY 236

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 228 WPGVTSMPDY 237

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 169
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 229 WPGVTSMPDY 238

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 169
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 229 WPGVTSMPDY 238

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 172
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 232 WPGVTSMPDY 241

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 171
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 231 WPGVTSMPDY 240

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 167
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 227 WPGVTSMPDY 236

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 228 WPGVTSMPDY 237

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 167
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 227 WPGVTSMPDY 236

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
           +A+    Q+  GLEH+  + +I++D+   N L+  D +V+IS  GL+ +    +      
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI 151
           A  P    P E +  +E+    D +A    ++E+
Sbjct: 350 AGTPGFMAP-ELLLGEEYDFSVDYFALGVTLYEM 382

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 228 WPGVTSMPDY 237

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 167
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 227 WPGVTSMPDY 236

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 228 WPGVTSMPDY 237

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 167
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 227 WPGVTSMPDY 236

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
           +A+    Q+  GLEH+  + +I++D+   N L+  D +V+IS  GL+ +    +      
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI 151
           A  P    P E +  +E+    D +A    ++E+
Sbjct: 350 AGTPGFMAP-ELLLGEEYDFSVDYFALGVTLYEM 382

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
           +A+    Q+  GLEH+  + +I++D+   N L+  D +V+IS  GL+ +    +      
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI 151
           A  P    P E +  +E+    D +A    ++E+
Sbjct: 350 AGTPGFMAP-ELLLGEEYDFSVDYFALGVTLYEM 382

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 228 WPGVTSMPDY 237

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 170
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 230 WPGVTSMPDY 239

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
           +A+    Q+  GLEH+  + +I++D+   N L+  D +V+IS  GL+ +    +      
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI 151
           A  P    P E +  +E+    D +A    ++E+
Sbjct: 350 AGTPGFMAP-ELLLGEEYDFSVDYFALGVTLYEM 382

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 53  SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS-KDTYQKE 111
           S+S  Q + +    A GL ++  + +IH+D+ + N L+  +   KI+  G+S K T   +
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQ 194
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF 152
            +        L ++  E       + KSDVY++  +++E+ 
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 228 WPGVTSMPDY 237

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+   N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 170
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 178 WKHSSKTPEYITSL 191
           W   +  P+Y  S 
Sbjct: 230 WPGVTSMPDYKPSF 243

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + ++LS      + YQ+  GL++I    +IH+D+   N  ++ D  ++I   GL++  D 
Sbjct: 116 KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE 175
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+  +G+  FP
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELL-QGKALFP 222

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+   N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 228 WPGVTSMPDY 237

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+   N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 169
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 229 WPGVTSMPDY 238

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+   N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 171
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 231 WPGVTSMPDY 240

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----------VKISLSGL 103
           L   +A+    Q   GLE++  +R++H D+ A N L+SSD S          V +   GL
Sbjct: 163 LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 222
Query: 104 SKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS 163
            KD    +Y            +  E V       K DV++  C++  + N G  P+    
Sbjct: 223 GKDLLTGDYIPGTET-----HMAPEVVLGRSCDAKVDVWSSCCMMLHMLN-GCHPW---- 272
Query: 164 DDQVLSQLESKKLCWKHSSKTP 185
                +Q     LC K +S+ P
Sbjct: 273 -----TQFFRGPLCLKIASEPP 289

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           +Q+  GL      R++H+D+   N LI+++ ++K++  GL++  +      Y + ++ L 
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 169
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
           +   E +     +ST  D+++  C+  E+  +  + FP  S+ DQ+     +     ++ 
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 178 WKHSSKTPEY 187
           W   +  P+Y
Sbjct: 229 WPGVTSMPDY 238

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + ++LS      + YQ+  GL++I    +IH+D+   N  ++ D  ++I   GL++  D 
Sbjct: 124 KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE 183
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+  +G+  FP
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELL-QGKALFP 230

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP--- 121
           Q   GL+ +    ++H+D+   N L++S  +VK++  GL++       Y Y+ A+ P   
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------IYSYQMALDPVVV 173
Query: 122 -LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
            L +   E +    ++T  D+++  C+  E+F +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 207

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           RV+  S ++A    +Q+  G+ ++    ++H+D+   N L++ ++++KI+  GL+     
Sbjct: 105 RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
                Y     P  ++  E         +SDV++  C+ + +   G  PF
Sbjct: 165 PHEKHYTLCGTP-NYISPEIATRSAHGLESDVWSLGCMFYTLL-IGRPPF 212

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 14/127 (11%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 147 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 206
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP    
Sbjct: 207 EMTGYVATRWYRAPEIMLNWMHYNMTV--------DIWSVGCIMAELLT-GRTLFPGTDH 257
Query: 165 DQVLSQL 171
              L Q+
Sbjct: 258 INQLQQI 264

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 25/184 (13%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P+ + ++   A  +AY     L    D ++IH+D+ A N L+  +    +   GL+K   
Sbjct: 131 PKRQRIALGSARGLAY-----LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS----D 164
            K+ +        +  +  E +   + S K+DV+ Y  ++ E+   G+  F DL+    D
Sbjct: 186 YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF-DLARLAND 243
Query: 165 DQVL------SQLESKK--------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
           D V+        L+ KK        L   +  +  E +  +   C    P +RP    +V
Sbjct: 244 DDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303
Query: 211 TQLS 214
             L 
Sbjct: 304 RMLE 307

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+ +G++H+    +IH+D+   N ++ SD ++KI   GL+           R A   
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
               PY         E +    +    D+++   ++ E+  KG + FP        ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
            QL          + +PE++  L +  +  +   RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
           + YQ+ +G++H+    +IH+D+   N ++ SD ++KI   GL+           R A   
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
               PY         E +    +    D+++   ++ E+  KG + FP        ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
            QL          + +PE++  L +  +  +   RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQ 109
           ++LS      + YQ+  GL++I    +IH+D+   N  ++ D  ++I   GL++  D   
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM 185
Query: 110 KEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ 166
             Y     YR   + L W+ Y            D+++  C++ E+  +G+  FP  SD  
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELL-QGKALFPG-SD-- 233
Query: 167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFP 207
            + QL  K++     + +PE +  +  +    +    P  P
Sbjct: 234 YIDQL--KRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMP 272

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/101 (22%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD--TYQKEYYKYRNAILP 121
           YQ+  GL+++   ++IH+D+   N L++ +  +KI   G+++   T   E+  +    + 
Sbjct: 166 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 122 LRW--LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
            RW   P   +   E++   D+++  C+  E+  + ++ FP
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL-FP 265

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 25/124 (20%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISS-------------DLSVKISLSGLSK- 105
           +++  Q+A G+ H+   ++IH+D+  +N L+S+             +L + IS  GL K 
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 106 -DTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEM 157
            D+ Q  +     N      W   E +   E STK       D+++  C+ + I +KG+ 
Sbjct: 196 LDSGQXXFRXNLNNPSGTSGWRAPELL---EESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 158 PFPD 161
           PF D
Sbjct: 253 PFGD 256

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 25/124 (20%)
Query: 60  VTMAYQVALGLEHISDKRLIHKDIAARNCLISS-------------DLSVKISLSGLSK- 105
           +++  Q+A G+ H+   ++IH+D+  +N L+S+             +L + IS  GL K 
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 106 -DTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEM 157
            D+ Q  +     N      W   E +   E STK       D+++  C+ + I +KG+ 
Sbjct: 196 LDSGQXXFRXNLNNPSGTSGWRAPELL---EESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 158 PFPD 161
           PF D
Sbjct: 253 PFGD 256

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 35/168 (20%)
Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK------ 105
           R L  +      +Q+  GL    + +++H+D+  +N LI+    +K+   GL++      
Sbjct: 103 RGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162
Query: 106 DTYQKE----YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD 161
           +T+  E    +Y+  + ++  R           +ST  D+++  C++ E+   G+  FP 
Sbjct: 163 NTFSSEVVTLWYRAPDVLMGSR----------TYSTSIDIWSCGCILAEMIT-GKPLFPG 211
Query: 162 LSDDQVLSQL-----ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
            +D++ L  +        +  W   +K P+Y         +P+  QRP
Sbjct: 212 TNDEEQLKLIFDIMGTPNESLWPSVTKLPKY---------NPNIQQRP 250

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 25/184 (13%)
Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           P+ + ++   A  +AY     L    D ++IH+D+ A N L+  +    +   GL+K   
Sbjct: 139 PKRQRIALGSARGLAY-----LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS----D 164
            K+ +        +  +  E +   + S K+DV+ Y  ++ E+   G+  F DL+    D
Sbjct: 194 YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF-DLARLAND 251
Query: 165 DQVL------SQLESKK--------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
           D V+        L+ KK        L   +  +  E +  +   C    P +RP    +V
Sbjct: 252 DDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311
Query: 211 TQLS 214
             L 
Sbjct: 312 RMLE 315

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 182
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 229

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 188
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 189 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 235

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 182
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 229

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 230

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 182
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 229

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 230

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 117 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 176
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 177 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 223

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/101 (22%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 64  YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD--TYQKEYYKYRNAILP 121
           YQ+  GL+++   ++IH+D+   N L++ +  +KI   G+++   T   E+  +    + 
Sbjct: 165 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 122 LRW--LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
            RW   P   +   E++   D+++  C+  E+  + ++ FP
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL-FP 264

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL++  D 
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 196
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
               Y     YR   + L W+ Y            D+++  C++ E+   G   FP
Sbjct: 197 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 243

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	223
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-58
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-57
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-57
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-57
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-56
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-55
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-55
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	5e-55
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-55
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-54
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-54
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-54
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-54
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	5e-53
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-52
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-52
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-52
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-52
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-52
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-52
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	5e-52
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-51
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-51
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-51
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-51
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-50
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-50
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-49
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-49
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	6e-49
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-49
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-48
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-48
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-47
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-47
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-47
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	8e-47
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-46
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-46
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-46
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-46
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-46
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	9e-46
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-45
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-45
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	8e-45
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-43
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-42
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-42
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-42
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	8e-42
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-41
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-40
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-34
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-33
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-29
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	6e-29
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-28
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-28
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-27
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-24
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-21
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-18
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-18
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-17
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-17
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-16
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	8e-16
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-11
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-11
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-10
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-10
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-10
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-09
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-08
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-08
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-07
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	9e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-06
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	9e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-05
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-05
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-04
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-04
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-04

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  187 bits (476), Expect = 1e-58
 Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 15/202 (7%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDL +FL +   D+K  +G        L   Q + +A QVA G+ +++    +H+D+A 
Sbjct: 127 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT 186

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNCL+   L VKI   G+S+D Y  +YY+     +LP+RW+P E++   +F+T+SDV+++
Sbjct: 187 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 246

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL------CWKHSSKTPEYITSLHEKCIHP 198
             ++WEIF  G+ P+  LS+ + +  +   +       C       P  + ++   C   
Sbjct: 247 GVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC-------PPEVYAIMRGCWQR 299

Query: 199 HPHQRPTFPSIVTQLSDAMCND 220
            P QR +   +  +L  A+   
Sbjct: 300 EPQQRHSIKDVHARL-QALAQA 320

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  182 bits (465), Expect = 2e-57
 Identities = 63/198 (31%), Positives = 108/198 (54%), Gaps = 15/198 (7%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
            GDL +FL+     S   S      V+S L     V +  Q+A G+E++S   ++HKD+A
Sbjct: 96  HGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLA 155

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYA 143
            RN L+   L+VKIS  GL ++ Y  +YYK   N++LP+RW+  EA+   +FS  SD+++
Sbjct: 156 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWS 215

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL------CWKHSSKTPEYITSLHEKCIH 197
           Y  ++WE+F+ G  P+   S+  V+  + ++++      C       P ++ +L  +C +
Sbjct: 216 YGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDC-------PAWVYALMIECWN 268

Query: 198 PHPHQRPTFPSIVTQLSD 215
             P +RP F  I ++L  
Sbjct: 269 EFPSRRPRFKDIHSRLRA 286

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  183 bits (466), Expect = 2e-57
 Identities = 60/198 (30%), Positives = 106/198 (53%), Gaps = 15/198 (7%)

Query: 26  KGDLKQFLLATRKDSKD-KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
            GDL +FL A   D+     G  +     L  SQ + +A Q+A G+ +++ +  +H+D+A
Sbjct: 101 HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLA 160

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYA 143
            RNCL+ ++L VKI   G+S+D Y  +YY+   + +LP+RW+P E++   +F+T+SDV++
Sbjct: 161 TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 220

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIH 197
           +  ++WEIF  G+ P+  LS+ +V+  +         ++C       P+ +  +   C  
Sbjct: 221 FGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVC-------PKEVYDVMLGCWQ 273

Query: 198 PHPHQRPTFPSIVTQLSD 215
             P QR     I   L  
Sbjct: 274 REPQQRLNIKEIYKILHA 291

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  183 bits (466), Expect = 3e-57
 Identities = 59/193 (30%), Positives = 108/193 (55%), Gaps = 7/193 (3%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R    +      P +  +     + MA ++A G+ +++  + +H+D+AA
Sbjct: 112 RGDLKSYLRSLRPAMANNPVLAPPSLSKM-----IQMAGEIADGMAYLNANKFVHRDLAA 166

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D Y+ +YY K    +LP+RW+  E++ D  F+T SDV+++
Sbjct: 167 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L        P+ +  L   C   +P  RP
Sbjct: 227 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRP 285

Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 286 SFLEIISSIKEEM 298

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  181 bits (461), Expect = 2e-56
 Identities = 60/198 (30%), Positives = 106/198 (53%), Gaps = 15/198 (7%)

Query: 26  KGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
           KG+L+++L A R    + S    +     ++    V+  YQ+A G+E+++ ++ IH+D+A
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           ARN L++ +  +KI+  GL++D    +YY K  N  LP++W+  EA+FD  ++ +SDV++
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIH 197
           +  L+WEIF  G  P+P +  +++   L+          C          +  +   C H
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC-------TNELYMMMRDCWH 297

Query: 198 PHPHQRPTFPSIVTQLSD 215
             P QRPTF  +V  L  
Sbjct: 298 AVPSQRPTFKQLVEDLDR 315

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  178 bits (453), Expect = 2e-55
 Identities = 61/211 (28%), Positives = 111/211 (52%), Gaps = 23/211 (10%)

Query: 26  KGDLKQFLLATRKDSKDKSGSG---------KPRVRSLSTSQAVTMAYQVALGLEHISDK 76
            G L+ FL  +RK      GSG          P  R+L+    ++ A+Q++ G++++++ 
Sbjct: 110 YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM 169

Query: 77  RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEF 135
           +L+H+D+AARN L++    +KIS  GLS+D Y+++ Y K     +P++W+  E++FD  +
Sbjct: 170 KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIY 229

Query: 136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYIT 189
           +T+SDV+++  L+WEI   G  P+P +  +++ + L++         C        E + 
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNC-------SEEMY 282

Query: 190 SLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
            L  +C    P +RP F  I   L   M   
Sbjct: 283 RLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  179 bits (457), Expect = 2e-55
 Identities = 61/205 (29%), Positives = 108/205 (52%), Gaps = 15/205 (7%)

Query: 26  KGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
           KG+L+++L A R    + S    +     ++    V+  YQ+A G+E+++ ++ IH+D+A
Sbjct: 171 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 230

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYA 143
           ARN L++ +  +KI+  GL++D    +YYK   N  LP++W+  EA+FD  ++ +SDV++
Sbjct: 231 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 290

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIH 197
           +  L+WEIF  G  P+P +  +++   L+          C          +  +   C H
Sbjct: 291 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC-------TNELYMMMRDCWH 343

Query: 198 PHPHQRPTFPSIVTQLSDAMCNDVN 222
             P QRPTF  +V  L   +    N
Sbjct: 344 AVPSQRPTFKQLVEDLDRILTLTTN 368

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  178 bits (453), Expect = 5e-55
 Identities = 64/211 (30%), Positives = 113/211 (53%), Gaps = 24/211 (11%)

Query: 26  KGDLKQFLLATRKDSKD---------KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK 76
            GDL +FL +    +           ++    P    LS ++ + +A QVA G+ ++S++
Sbjct: 134 YGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER 193

Query: 77  RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEF 135
           + +H+D+A RNCL+  ++ VKI+  GLS++ Y  +YYK   N  +P+RW+P E++F + +
Sbjct: 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRY 253

Query: 136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL------CWKHSSKTPEYIT 189
           +T+SDV+AY  ++WEIF+ G  P+  ++ ++V+  +    +      C       P  + 
Sbjct: 254 TTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENC-------PLELY 306

Query: 190 SLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
           +L   C    P  RP+F SI   L   MC  
Sbjct: 307 NLMRLCWSKLPADRPSFCSIHRIL-QRMCER 336

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  177 bits (451), Expect = 5e-55
 Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 23/197 (11%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDL  FLLA+R               +L     V     +A G+E++S +  IH+D+AA
Sbjct: 115 HGDLHAFLLASRIGENP---------FNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAA 165

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D++V ++  GLS+  Y  +YY +   + LP++WL  E++ D+ ++  SDV+A+
Sbjct: 166 RNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAF 225

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHP 198
              +WEI  +G+ P+  + + ++ + L           C        E +  L  +C   
Sbjct: 226 GVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPEC-------MEEVYDLMYQCWSA 278

Query: 199 HPHQRPTFPSIVTQLSD 215
            P QRP+F  +  +L +
Sbjct: 279 DPKQRPSFTCLRMELEN 295

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  175 bits (447), Expect = 1e-54
 Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 18/208 (8%)

Query: 26  KGDLKQFLLATRKD---SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKD 82
            GDL  FL   R     SK      +    +L     ++ +YQVA G+  ++ K  IH+D
Sbjct: 111 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 170

Query: 83  IAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDV 141
           +AARN L++     KI   GL++D      Y  + NA LP++W+  E++F+  ++ +SDV
Sbjct: 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV 230

Query: 142 YAYACLIWEIFNKGEMPFPDLS-DDQVLSQLESK------KLCWKHSSKTPEYITSLHEK 194
           ++Y   +WE+F+ G  P+P +  D +    ++        +         P  +  + + 
Sbjct: 231 WSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA-------PAEMYDIMKT 283

Query: 195 CIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
           C    P +RPTF  IV  +   +    N
Sbjct: 284 CWDADPLKRPTFKQIVQLIEKQISESTN 311

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  175 bits (446), Expect = 2e-54
 Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 23/197 (11%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDL  +LL +R ++           + +     +     +ALG+E++S++  +H+D+AA
Sbjct: 125 YGDLHTYLLYSRLETGP---------KHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAA 175

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC++  D++V ++  GLSK  Y  +YY + R A +P++W+  E++ D  +++KSDV+A+
Sbjct: 176 RNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAF 235

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHP 198
              +WEI  +G  P+P + + ++   L         + C        + +  +   C   
Sbjct: 236 GVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDC-------LDELYEIMYSCWRT 288

Query: 199 HPHQRPTFPSIVTQLSD 215
            P  RPTF  +  QL  
Sbjct: 289 DPLDRPTFSVLRLQLEK 305

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  175 bits (446), Expect = 3e-54
 Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 16/207 (7%)

Query: 26  KGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
            G+L  +L + R +               L+    +  ++QVA G+E ++ ++ IH+D+A
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 175

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           ARN L+S    VKI   GL++D Y+   Y +  +A LPL+W+  E +FD  ++ +SDV++
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235

Query: 144 YACLIWEIFNKGEMPFPDLS-DDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCI 196
           +  L+WEIF+ G  P+P +  D++   +L+                     +      C 
Sbjct: 236 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT-------TPEMYQTMLDCW 288

Query: 197 HPHPHQRPTFPSIVTQLSDAMCNDVNS 223
           H  P QRPTF  +V  L + +  +   
Sbjct: 289 HGEPSQRPTFSELVEHLGNLLQANAQQ 315

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  176 bits (447), Expect = 7e-54
 Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 15/206 (7%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVR-SLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
           KG+L+++L A R    + S +        LS+   V+ AYQVA G+E+++ K+ IH+D+A
Sbjct: 159 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA 218

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           ARN L++ D  +KI+  GL++D +  +YY K  N  LP++W+  EA+FD  ++ +SDV++
Sbjct: 219 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 278

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL------CWKHSSKTPEYITSLHEKCIH 197
           +  L+WEIF  G  P+P +  +++   L+          C          +  +   C H
Sbjct: 279 FGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC-------TNELYMMMRDCWH 331

Query: 198 PHPHQRPTFPSIVTQLSDAMCNDVNS 223
             P QRPTF  +V  L   +    N 
Sbjct: 332 AVPSQRPTFKQLVEDLDRIVALTSNQ 357

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  172 bits (438), Expect = 5e-53
 Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 16/205 (7%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDL  FL    +  +           + ST   +  + QVA G+  ++ K  IH+D+AA
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIAN-STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAA 192

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RN L+++    KI   GL++D      Y  + NA LP++W+  E++FD  ++ +SDV++Y
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252

Query: 145 ACLIWEIFNKGEMPFP-DLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIH 197
             L+WEIF+ G  P+P  L + +    ++                  P+ I S+ + C  
Sbjct: 253 GILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA-------PKNIYSIMQACWA 305

Query: 198 PHPHQRPTFPSIVTQLSDAMCNDVN 222
             P  RPTF  I + L +    D  
Sbjct: 306 LEPTHRPTFQQICSFLQEQAQEDRR 330

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  170 bits (434), Expect = 1e-52
 Identities = 52/199 (26%), Positives = 102/199 (51%), Gaps = 30/199 (15%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDL QF+ + +              R+ +    ++   QVA G+E++++++ +H+D+AA
Sbjct: 107 HGDLLQFIRSPQ--------------RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAA 152

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYR---NAILPLRWLPYEAVFDDEFSTKSDVY 142
           RNC++    +VK++  GL++D   +EYY  +   +A LP++W   E++    F+TKSDV+
Sbjct: 153 RNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVW 212

Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCI 196
           ++  L+WE+  +G  P+  +    +   L         + C       P+ +  + ++C 
Sbjct: 213 SFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYC-------PDSLYQVMQQCW 265

Query: 197 HPHPHQRPTFPSIVTQLSD 215
              P  RPTF  +V ++  
Sbjct: 266 EADPAVRPTFRVLVGEVEQ 284

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  171 bits (436), Expect = 1e-52
 Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 17/205 (8%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIA 84
            G+L  FL  +R    D + +      S LS+ Q +  A  VA G++++S K+ IH+D+A
Sbjct: 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLA 169

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           ARN L+  +   KI+  GLS+    + Y K     LP+RW+  E++    ++T SDV++Y
Sbjct: 170 ARNILVGENYVAKIADFGLSRGQ--EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 227

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHP 198
             L+WEI + G  P+  ++  ++  +L           C        + +  L  +C   
Sbjct: 228 GVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC-------DDEVYDLMRQCWRE 280

Query: 199 HPHQRPTFPSIVTQLSDAMCNDVNS 223
            P++RP+F  I+  L + M  +  +
Sbjct: 281 KPYERPSFAQILVSL-NRMLEERKT 304

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  170 bits (432), Expect = 1e-52
 Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 27/196 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G+L+ FL   +               SL  +  +  AYQ++  L ++  KR +H+DIAA
Sbjct: 99  LGELRSFLQVRK--------------YSLDLASLILYAYQLSTALAYLESKRFVHRDIAA 144

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RN L+SS+  VK+   GLS+      YYK     LP++W+  E++    F++ SDV+ + 
Sbjct: 145 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 204

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
             +WEI   G  PF  + ++ V+ ++E+         C       P  + SL  KC    
Sbjct: 205 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-------PPTLYSLMTKCWAYD 257

Query: 200 PHQRPTFPSIVTQLSD 215
           P +RP F  +  QLS 
Sbjct: 258 PSRRPRFTELKAQLST 273

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  171 bits (436), Expect = 2e-52
 Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 23/214 (10%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGK--------PRVRSLSTSQAVTMAYQVALGLEHISDKR 77
            GDL  +L + R+   +     +          +  L+    +  AYQVA G+E +  K 
Sbjct: 133 YGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS 192

Query: 78  LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFS 136
            +H+D+AARN L++    VKI   GL++D      Y    NA LP++W+  E++F+  ++
Sbjct: 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT 252

Query: 137 TKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQLESK------KLCWKHSSKTPEYIT 189
            KSDV++Y  L+WEIF+ G  P+P +  D      +++                  E I 
Sbjct: 253 IKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYA-------TEEIY 305

Query: 190 SLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
            + + C      +RP+FP++ + L   + +   +
Sbjct: 306 IIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  170 bits (434), Expect = 2e-52
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDLK FL  TR      S        SL+    + +A  +A G +++ +   IH+DIAA
Sbjct: 117 GGDLKSFLRETRPRPSQPS--------SLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 168

Query: 86  RNCLIS---SDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDV 141
           RNCL++        KI   G+++D Y+  YY K   A+LP++W+P EA  +  F++K+D 
Sbjct: 169 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 228

Query: 142 YAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPH 201
           +++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P 
Sbjct: 229 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPE 287

Query: 202 QRPTFPSIVTQLSDAMCND 220
            RP F  I+ ++ +    D
Sbjct: 288 DRPNFAIILERI-EYCTQD 305

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  170 bits (432), Expect = 2e-52
 Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 30/199 (15%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDL+ F+                   + +    +    QVA G+++++ K+ +H+D+AA
Sbjct: 111 HGDLRNFIRNET--------------HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAA 156

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKY---RNAILPLRWLPYEAVFDDEFSTKSDVY 142
           RNC++    +VK++  GL++D Y KEYY       A LP++W+  E++   +F+TKSDV+
Sbjct: 157 RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 216

Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL------CWKHSSKTPEYITSLHEKCI 196
           ++  L+WE+  +G  P+PD++   +   L   +       C       P+ +  +  KC 
Sbjct: 217 SFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC-------PDPLYEVMLKCW 269

Query: 197 HPHPHQRPTFPSIVTQLSD 215
           HP    RP+F  +V+++S 
Sbjct: 270 HPKAEMRPSFSELVSRISA 288

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  168 bits (427), Expect = 5e-52
 Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 27/196 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L  +L              +   + L  SQ + M Y V  G+  +   + IH+D+AA
Sbjct: 87  NGCLLNYL--------------RSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAA 132

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RNCL+  DL VK+S  G+++     +Y        P++W   E     ++S+KSDV+A+ 
Sbjct: 133 RNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFG 192

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
            L+WE+F+ G+MP+   ++ +V+ ++          L         + I  +   C H  
Sbjct: 193 ILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLA-------SDTIYQIMYSCWHEL 245

Query: 200 PHQRPTFPSIVTQLSD 215
           P +RPTF  +++ +  
Sbjct: 246 PEKRPTFQQLLSSIEP 261

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  166 bits (423), Expect = 2e-51
 Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 27/196 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G+L  +L         +      +V +L     V  + Q+   + ++     +H+DIA 
Sbjct: 96  YGELGHYL---------ERNKNSLKVLTL-----VLYSLQICKAMAYLESINCVHRDIAV 141

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RN L++S   VK+   GLS+    ++YYK     LP++W+  E++    F+T SDV+ +A
Sbjct: 142 RNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFA 201

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
             +WEI + G+ PF  L +  V+  LE         LC       P  + +L  +C    
Sbjct: 202 VCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC-------PPVLYTLMTRCWDYD 254

Query: 200 PHQRPTFPSIVTQLSD 215
           P  RP F  +V  LSD
Sbjct: 255 PSDRPRFTELVCSLSD 270

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  169 bits (429), Expect = 3e-51
 Identities = 54/199 (27%), Positives = 101/199 (50%), Gaps = 30/199 (15%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDL+ F+                   + +    +    QVA G++ ++ K+ +H+D+AA
Sbjct: 175 HGDLRNFIRNET--------------HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAA 220

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYR---NAILPLRWLPYEAVFDDEFSTKSDVY 142
           RNC++    +VK++  GL++D Y KE+        A LP++W+  E++   +F+TKSDV+
Sbjct: 221 RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 280

Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL------CWKHSSKTPEYITSLHEKCI 196
           ++  L+WE+  +G  P+PD++   +   L   +       C       P+ +  +  KC 
Sbjct: 281 SFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC-------PDPLYEVMLKCW 333

Query: 197 HPHPHQRPTFPSIVTQLSD 215
           HP    RP+F  +V+++S 
Sbjct: 334 HPKAEMRPSFSELVSRISA 352

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  169 bits (429), Expect = 3e-51
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GDLK FL  TR      S        SL+    + +A  +A G +++ +   IH+DIAA
Sbjct: 158 GGDLKSFLRETRPRPSQPS--------SLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 209

Query: 86  RNCLIS---SDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDV 141
           RNCL++        KI   G+++D Y+  YY K   A+LP++W+P EA  +  F++K+D 
Sbjct: 210 RNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 269

Query: 142 YAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPH 201
           +++  L+WEIF+ G MP+P  S+ +VL  + S           P  +  +  +C    P 
Sbjct: 270 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPE 328

Query: 202 QRPTFPSIVTQLSDAMCND 220
            RP F  I+ ++ +    D
Sbjct: 329 DRPNFAIILERI-EYCTQD 346

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  165 bits (421), Expect = 4e-51
 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 26/196 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L  FL         K+ SG      L+ ++ + MA Q+A G+  I ++  IH+D+ A
Sbjct: 91  NGSLVDFL---------KTPSGI----KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 137

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            N L+S  LS KI+  GL++     EY     A  P++W   EA+    F+ KSDV+++ 
Sbjct: 138 ANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
            L+ EI   G +P+P +++ +V+  LE          C       PE +  L   C    
Sbjct: 198 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC-------PEELYQLMRLCWKER 250

Query: 200 PHQRPTFPSIVTQLSD 215
           P  RPTF  + + L D
Sbjct: 251 PEDRPTFDYLRSVLED 266

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  164 bits (417), Expect = 1e-50
 Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 27/196 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L  +L         ++  G       +    + M   V  G+ ++ +  +IH+D+AA
Sbjct: 87  HGCLSDYL---------RTQRGL-----FAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 132

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RNCL+  +  +K+S  G+++     +Y        P++W   E      +S+KSDV+++ 
Sbjct: 133 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 192

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
            L+WE+F++G++P+ + S+ +V+  + +       +L          ++  +   C    
Sbjct: 193 VLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA-------STHVYQIMNHCWRER 245

Query: 200 PHQRPTFPSIVTQLSD 215
           P  RP F  ++ QL++
Sbjct: 246 PEDRPAFSRLLRQLAE 261

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  163 bits (416), Expect = 3e-50
 Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 27/196 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L  +L         +    +       T Q + M   V   +E++  K+ +H+D+AA
Sbjct: 103 NGCLLNYL---------REMRHR-----FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAA 148

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RNCL++    VK+S  GLS+     EY     +  P+RW P E +   +FS+KSD++A+ 
Sbjct: 149 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
            L+WEI++ G+MP+   ++ +    +          L         E + ++   C H  
Sbjct: 209 VLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA-------SEKVYTIMYSCWHEK 261

Query: 200 PHQRPTFPSIVTQLSD 215
             +RPTF  +++ + D
Sbjct: 262 ADERPTFKILLSNILD 277

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  163 bits (415), Expect = 1e-49
 Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 28/197 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L  ++    ++ KD           + +   +    Q+A G+ ++ D+RL+H+D+AA
Sbjct: 100 FGCLLDYV----REHKDN----------IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAA 145

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RN L+ +   VKI+  GL+K    +E  Y      +P++W+  E++    ++ +SDV++Y
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHP 198
              +WE+   G  P+  +   ++ S LE         +C          +  +  KC   
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC-------TIDVYMIMRKCWMI 258

Query: 199 HPHQRPTFPSIVTQLSD 215
               RP F  ++ + S 
Sbjct: 259 DADSRPKFRELIIEFSK 275

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  162 bits (412), Expect = 2e-49
 Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 26/196 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G+L  +L    +             + +S    + MA Q++  +E++  K  IH+D+AA
Sbjct: 93  YGNLLDYLRECNR-------------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RNCL+  +  VK++  GLS+      Y  +  A  P++W   E++  ++FS KSDV+A+ 
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
            L+WEI   G  P+P +   QV   LE        + C       PE +  L   C   +
Sbjct: 200 VLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC-------PEKVYELMRACWQWN 252

Query: 200 PHQRPTFPSIVTQLSD 215
           P  RP+F  I      
Sbjct: 253 PSDRPSFAEIHQAFET 268

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  160 bits (407), Expect = 6e-49
 Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 30/196 (15%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           KG L  +L         +S         L     +  +  V   +E++     +H+D+AA
Sbjct: 99  KGSLVDYL---------RSRGRSV----LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 145

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RN L+S D   K+S  GL+K+             LP++W   EA+ + +FSTKSDV+++ 
Sbjct: 146 RNVLVSEDNVAKVSDFGLTKE----ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 201

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
            L+WEI++ G +P+P +    V+ ++E          C       P  +  + + C H  
Sbjct: 202 ILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC-------PPAVYEVMKNCWHLD 254

Query: 200 PHQRPTFPSIVTQLSD 215
              RP+F  +  QL  
Sbjct: 255 AAMRPSFLQLREQLEH 270

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  162 bits (413), Expect = 7e-49
 Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 28/197 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            GD   FL              +     L     + M    A G+E++  K  IH+D+AA
Sbjct: 196 GGDFLTFL--------------RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA-ILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNCL++    +KIS  G+S++     Y        +P++W   EA+    +S++SDV+++
Sbjct: 242 RNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSF 301

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHP 198
             L+WE F+ G  P+P+LS+ Q    +E        +LC       P+ +  L E+C   
Sbjct: 302 GILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELC-------PDAVFRLMEQCWAY 354

Query: 199 HPHQRPTFPSIVTQLSD 215
            P QRP+F +I  +L  
Sbjct: 355 EPGQRPSFSTIYQELQS 371

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  160 bits (406), Expect = 3e-48
 Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 29/198 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L  FL              +      +  Q V M   V  G+ ++SD   +H+D+AA
Sbjct: 134 NGSLDTFL--------------RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAA 179

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKY--RNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           RN L+ S+L  K+S  GLS+         Y      +P+RW   EA+    FS+ SDV++
Sbjct: 180 RNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWS 239

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIH 197
           +  ++WE+   GE P+ ++++  V+S +E          C       P  +  L   C H
Sbjct: 240 FGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGC-------PHALHQLMLDCWH 292

Query: 198 PHPHQRPTFPSIVTQLSD 215
               QRP F  IV+ L  
Sbjct: 293 KDRAQRPRFSQIVSVLDA 310

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  166 bits (422), Expect = 3e-48
 Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 27/196 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G+L+ FL   +               SL  +  +  AYQ++  L ++  KR +H+DIAA
Sbjct: 474 LGELRSFLQVRK--------------FSLDLASLILYAYQLSTALAYLESKRFVHRDIAA 519

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RN L+SS+  VK+   GLS+      YYK     LP++W+  E++    F++ SDV+ + 
Sbjct: 520 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 579

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
             +WEI   G  PF  + ++ V+ ++E+         C       P  + SL  KC    
Sbjct: 580 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-------PPTLYSLMTKCWAYD 632

Query: 200 PHQRPTFPSIVTQLSD 215
           P +RP F  +  QLS 
Sbjct: 633 PSRRPRFTELKAQLST 648

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  161 bits (409), Expect = 2e-47
 Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 26/196 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           KG L  FL         K  +GK     L   Q V MA Q+A G+ ++     +H+D+ A
Sbjct: 262 KGSLLDFL---------KGETGK----YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            N L+  +L  K++  GL++     EY   + A  P++W   EA     F+ KSDV+++ 
Sbjct: 309 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
            L+ E+  KG +P+P + + +VL Q+E          C       PE +  L  +C    
Sbjct: 369 ILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC-------PESLHDLMCQCWRKE 421

Query: 200 PHQRPTFPSIVTQLSD 215
           P +RPTF  +   L D
Sbjct: 422 PEERPTFEYLQAFLED 437

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  158 bits (401), Expect = 2e-47
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 29/198 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L +FL         +   G+      S  Q V M   +A G++++++   +H+D+AA
Sbjct: 130 NGALDKFL---------REKDGE-----FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAA 175

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKY--RNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           RN L++S+L  K+S  GLS+         Y      +P+RW   EA+   +F++ SDV++
Sbjct: 176 RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWS 235

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIH 197
           +  ++WE+   GE P+ +LS+ +V+  +           C       P  I  L  +C  
Sbjct: 236 FGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDC-------PSAIYQLMMQCWQ 288

Query: 198 PHPHQRPTFPSIVTQLSD 215
               +RP F  IV+ L  
Sbjct: 289 QERARRPKFADIVSILDK 306

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  158 bits (401), Expect = 4e-47
 Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 29/198 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L  FL         +    +      +  Q V M   +A G++++SD   +H+D+AA
Sbjct: 130 NGSLDSFL---------RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAA 175

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKY--RNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           RN LI+S+L  K+S  GL +         Y  R   +P+RW   EA+   +F++ SDV++
Sbjct: 176 RNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIH 197
           Y  ++WE+ + GE P+ ++S+  V+  ++          C       P  +  L   C  
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC-------PAALYQLMLDCWQ 288

Query: 198 PHPHQRPTFPSIVTQLSD 215
              + RP F  IV+ L  
Sbjct: 289 KDRNNRPKFEQIVSILDK 306

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  156 bits (396), Expect = 8e-47
 Identities = 44/197 (22%), Positives = 87/197 (44%), Gaps = 28/197 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L  ++   +               ++ +   +    Q+A G+ ++ D+RL+H+D+AA
Sbjct: 100 FGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAA 145

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RN L+ +   VKI+  GL+K    +E  Y      +P++W+  E++    ++ +SDV++Y
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHP 198
              +WE+   G  P+  +   ++ S LE         +C          +  +  KC   
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC-------TIDVYMIMVKCWMI 258

Query: 199 HPHQRPTFPSIVTQLSD 215
               RP F  ++ + S 
Sbjct: 259 DADSRPKFRELIIEFSK 275

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  155 bits (393), Expect = 1e-46
 Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 30/207 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L   L   +                         A QVA G+ ++  KR IH+D+AA
Sbjct: 104 LGSLLDRLRKHQ--------------GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAA 149

Query: 86  RNCLISSDLSVKISLSGLSKDTYQ--KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           RN L+++   VKI   GL +   Q    Y    +  +P  W   E++    FS  SD + 
Sbjct: 150 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 209

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESK-------KLCWKHSSKTPEYITSLHEKCI 196
           +   +WE+F  G+ P+  L+  Q+L +++ +       + C       P+ I ++  +C 
Sbjct: 210 FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC-------PQDIYNVMVQCW 262

Query: 197 HPHPHQRPTFPSIVTQLSDAMCNDVNS 223
              P  RPTF ++   L +A   D+ +
Sbjct: 263 AHKPEDRPTFVALRDFLLEAQPTDMRA 289

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  160 bits (406), Expect = 1e-46
 Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 26/196 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           KG L  FL         K  +GK     L   Q V MA Q+A G+ ++     +H+D+ A
Sbjct: 345 KGSLLDFL---------KGETGK----YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 391

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            N L+  +L  K++  GL++     EY   + A  P++W   EA     F+ KSDV+++ 
Sbjct: 392 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 451

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
            L+ E+  KG +P+P + + +VL Q+E          C       PE +  L  +C    
Sbjct: 452 ILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC-------PESLHDLMCQCWRKE 504

Query: 200 PHQRPTFPSIVTQLSD 215
           P +RPTF  +   L D
Sbjct: 505 PEERPTFEYLQAFLED 520

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  158 bits (402), Expect = 1e-46
 Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 26/196 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           KG L  FL         KS  G          + +  + Q+A G+  I  +  IH+D+ A
Sbjct: 266 KGSLLDFL---------KSDEGSK----QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 312

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            N L+S+ L  KI+  GL++     EY     A  P++W   EA+    F+ KSDV+++ 
Sbjct: 313 ANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 372

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
            L+ EI   G +P+P +S+ +V+  LE        + C       PE + ++  +C    
Sbjct: 373 ILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC-------PEELYNIMMRCWKNR 425

Query: 200 PHQRPTFPSIVTQLSD 215
           P +RPTF  I + L D
Sbjct: 426 PEERPTFEYIQSVLDD 441

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  155 bits (393), Expect = 2e-46
 Identities = 40/197 (20%), Positives = 83/197 (42%), Gaps = 28/197 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L   +   R               +L     +    Q+A G+ ++ +  ++H+++AA
Sbjct: 98  LGSLLDHVRQHR--------------GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAA 143

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RN L+ S   V+++  G++      +    Y  A  P++W+  E++   +++ +SDV++Y
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHP 198
              +WE+   G  P+  L   +V   LE        ++C          +  +  KC   
Sbjct: 204 GVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQIC-------TIDVYMVMVKCWMI 256

Query: 199 HPHQRPTFPSIVTQLSD 215
             + RPTF  +  + + 
Sbjct: 257 DENIRPTFKELANEFTR 273

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  153 bits (389), Expect = 4e-46
 Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 29/198 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L +FL+  R                +  S    + +QV++G++++ +K  +H+D+AA
Sbjct: 93  GGPLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAA 138

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           RN L+ +    KIS  GLSK     +  Y        PL+W   E +   +FS++SDV++
Sbjct: 139 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 198

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIH 197
           Y   +WE  + G+ P+  +   +V++ +E          C       P  + +L   C  
Sbjct: 199 YGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC-------PPELYALMSDCWI 251

Query: 198 PHPHQRPTFPSIVTQLSD 215
                RP F ++  ++  
Sbjct: 252 YKWEDRPDFLTVEQRMRA 269

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  152 bits (387), Expect = 9e-46
 Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 30/198 (15%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L ++L   +++            R +     + + +QV++G++++ +   +H+D+AA
Sbjct: 101 LGPLNKYL---QQN------------RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA 145

Query: 86  RNCLISSDLSVKISLSGLSKDTY--QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           RN L+ +    KIS  GLSK     +  Y    +   P++W   E +   +FS+KSDV++
Sbjct: 146 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 205

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLES------KKLCWKHSSKTPEYITSLHEKCIH 197
           +  L+WE F+ G+ P+  +   +V + LE          C       P  +  L   C  
Sbjct: 206 FGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC-------PREMYDLMNLCWT 258

Query: 198 PHPHQRPTFPSIVTQLSD 215
                RP F ++  +L +
Sbjct: 259 YDVENRPGFAAVELRLRN 276

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  156 bits (397), Expect = 2e-45
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 26/196 (13%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G+L  +L    +             + +S    + MA Q++  +E++  K  IH+++AA
Sbjct: 300 YGNLLDYLRECNR-------------QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAA 346

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RNCL+  +  VK++  GLS+      Y  +  A  P++W   E++  ++FS KSDV+A+ 
Sbjct: 347 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 406

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
            L+WEI   G  P+P +   QV   LE        + C       PE +  L   C   +
Sbjct: 407 VLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC-------PEKVYELMRACWQWN 459

Query: 200 PHQRPTFPSIVTQLSD 215
           P  RP+F  I      
Sbjct: 460 PSDRPSFAEIHQAFET 475

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  151 bits (384), Expect = 2e-45
 Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 39/211 (18%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L  +L   +                ++    + +A Q+A  +  + +  LIH ++ A
Sbjct: 96  FGSLDTYLKKNK--------------NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCA 141

Query: 86  RNCLISSD--------LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFS 136
           +N L+  +          +K+S  G+S     K+  +       + W+P E + +    +
Sbjct: 142 KNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ-----ERIPWVPPECIENPKNLN 196

Query: 137 TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES----KKLCWKHSSKTPEYITSLH 192
             +D +++   +WEI + G+ P   L   + L   E                     +L 
Sbjct: 197 LATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKA-----AELA--NLI 249

Query: 193 EKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
             C+   P  RP+F +I+  L+     D+  
Sbjct: 250 NNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  154 bits (390), Expect = 8e-45
 Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 30/201 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           KG L  +L   R   +            L     +  +  V   +E++     +H+D+AA
Sbjct: 271 KGSLVDYL---RSRGR----------SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 317

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RN L+S D   K+S  GL+K+             LP++W   EA+ + +FSTKSDV+++ 
Sbjct: 318 RNVLVSEDNVAKVSDFGLTKE----ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 373

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPH 199
            L+WEI++ G +P+P +    V+ ++E          C       P  +  + + C H  
Sbjct: 374 ILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC-------PPAVYDVMKNCWHLD 426

Query: 200 PHQRPTFPSIVTQLSDAMCND 220
              RPTF  +  QL     ++
Sbjct: 427 AATRPTFLQLREQLEHIRTHE 447

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score =  148 bits (375), Expect = 2e-43
 Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 15/177 (8%)

Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
                L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y
Sbjct: 185 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 244

Query: 109 QKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQ 166
           +   Y +  +A LPL+W+  E +FD  ++ +SDV+++  L+WEIF+ G  P+P +  D++
Sbjct: 245 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 304

Query: 167 VLSQLESK------KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
              +L+                     +      C H  P QRPTF  +V  L + +
Sbjct: 305 FCRRLKEGTRMRAPDYT-------TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  144 bits (366), Expect = 2e-42
 Identities = 46/212 (21%), Positives = 86/212 (40%), Gaps = 45/212 (21%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L+ +L                   S+  +Q +  A Q+  G+ ++  +  IH+D+AA
Sbjct: 119 LGSLRDYL----------------PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAA 162

Query: 86  RNCLISSDLSVKISLSGLSKDTYQ-KEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYA 143
           RN L+ +D  VKI   GL+K   +  EYY+ R +   P+ W   E + + +F   SDV++
Sbjct: 163 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWS 222

Query: 144 YACLIWEIFNKGE--------------MPFPDLSDDQVLSQLESKK------LCWKHSSK 183
           +   ++E+    +              +    ++  ++   LE  +       C      
Sbjct: 223 FGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKC------ 276

Query: 184 TPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
            P  +  L + C       RPTF +++  L  
Sbjct: 277 -PAEVYHLMKNCWETEASFRPTFENLIPILKT 307

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  149 bits (378), Expect = 3e-42
 Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 29/198 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L +FL+  R                +  S    + +QV++G++++ +K  +H+++AA
Sbjct: 419 GGPLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAA 464

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
           RN L+ +    KIS  GLSK     +  Y        PL+W   E +   +FS++SDV++
Sbjct: 465 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 524

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESKK------LCWKHSSKTPEYITSLHEKCIH 197
           Y   +WE  + G+ P+  +   +V++ +E  K       C       P  + +L   C  
Sbjct: 525 YGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC-------PPELYALMSDCWI 577

Query: 198 PHPHQRPTFPSIVTQLSD 215
                RP F ++  ++  
Sbjct: 578 YKWEDRPDFLTVEQRMRA 595

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  142 bits (361), Expect = 8e-42
 Identities = 44/213 (20%), Positives = 91/213 (42%), Gaps = 44/213 (20%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L+ +L   ++               +   + +    Q+  G+E++  KR IH+D+A 
Sbjct: 97  YGSLRDYLQKHKE--------------RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLAT 142

Query: 86  RNCLISSDLSVKISLSGLSKD-TYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYA 143
           RN L+ ++  VKI   GL+K     KE++K +     P+ W   E++ + +FS  SDV++
Sbjct: 143 RNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWS 202

Query: 144 YACLIWEIF---------------NKGEMPFPDLSDDQVLSQLESKK------LCWKHSS 182
           +  +++E+F                 G      +    ++  L++         C     
Sbjct: 203 FGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGC----- 257

Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             P+ I  +  +C + + +QRP+F  +  ++  
Sbjct: 258 --PDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  143 bits (362), Expect = 8e-42
 Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 44/213 (20%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L+ +L   ++               +   + +    Q+  G+E++  KR IH+D+A 
Sbjct: 128 YGSLRDYLQKHKE--------------RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLAT 173

Query: 86  RNCLISSDLSVKISLSGLSKD-TYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYA 143
           RN L+ ++  VKI   GL+K     KEYYK +     P+ W   E++ + +FS  SDV++
Sbjct: 174 RNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWS 233

Query: 144 YACLIWEIF---------------NKGEMPFPDLSDDQVLSQLESKK------LCWKHSS 182
           +  +++E+F                 G      +    ++  L++         C     
Sbjct: 234 FGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGC----- 288

Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             P+ I  +  +C + + +QRP+F  +  ++  
Sbjct: 289 --PDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  141 bits (357), Expect = 3e-41
 Identities = 44/212 (20%), Positives = 87/212 (41%), Gaps = 43/212 (20%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G LK++L   +                ++  Q +  A Q+  G++++  ++ +H+D+AA
Sbjct: 109 SGSLKEYLPKNKN--------------KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAA 154

Query: 86  RNCLISSDLSVKISLSGLSKDTYQ-KEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYA 143
           RN L+ S+  VKI   GL+K     KEYY  + +   P+ W   E +   +F   SDV++
Sbjct: 155 RNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWS 214

Query: 144 YACLIWEIFNKGEM--------------PFPDLSDDQVLSQLESKK------LCWKHSSK 183
           +   + E+    +                   ++  ++++ L+  K       C      
Sbjct: 215 FGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNC------ 268

Query: 184 TPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
            P+ +  L  KC    P  R +F +++     
Sbjct: 269 -PDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  140 bits (354), Expect = 1e-40
 Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 43/212 (20%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L+ FL   R                L  S+ +  + Q+  G+E++  +R +H+D+AA
Sbjct: 110 SGCLRDFLQRHRA--------------RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAA 155

Query: 86  RNCLISSDLSVKISLSGLSKD-TYQKEYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYA 143
           RN L+ S+  VKI+  GL+K     K+YY  R     P+ W   E++ D+ FS +SDV++
Sbjct: 156 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 215

Query: 144 YACLIWEIFNKGEMPF--------------PDLSDDQVLSQLESKK------LCWKHSSK 183
           +  +++E+F   +                    +  ++L  LE  +       C      
Sbjct: 216 FGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPAC------ 269

Query: 184 TPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
            P  +  L + C  P P  RP+F ++  QL  
Sbjct: 270 -PAEVHELMKLCWAPSPQDRPSFSALGPQLDM 300

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  121 bits (305), Expect = 1e-33
 Identities = 39/172 (22%), Positives = 87/172 (50%), Gaps = 9/172 (5%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
                 + + +A Q A G++++  K +IH+D+ + N  +  D +VKI   GL+ +  +  
Sbjct: 115 TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174

Query: 112 YYKYRNAIL-PLRWLPYEAVFDDE---FSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQ 166
                  +   + W+  E +   +   +S +SDVYA+  +++E+   G++P+ ++++ DQ
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 233

Query: 167 VLSQLESKKL---CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           ++  +    L     K  S  P+ +  L  +C+     +RP+FP I+ ++ +
Sbjct: 234 IIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  109 bits (275), Expect = 2e-29
 Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 25/192 (13%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLE--HISDKRLIHKDIA 84
           G L   L              +     +  SQAV  A  +A G+   H  +  +    + 
Sbjct: 94  GSLYNVLH-------------EGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALN 140

Query: 85  ARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD---DEFSTKSDV 141
           +R+ +I  D++ +IS++ +               +    W+  EA+     D     +D+
Sbjct: 141 SRSVMIDEDMTARISMADVKFSFQSP------GRMYAPAWVAPEALQKKPEDTNRRSADM 194

Query: 142 YAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPH 201
           +++A L+WE+    E+PF DLS+ ++  ++  + L          +++ L + C++  P 
Sbjct: 195 WSFAVLLWELVT-REVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPA 253

Query: 202 QRPTFPSIVTQL 213
           +RP F  IV  L
Sbjct: 254 KRPKFDMIVPIL 265

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  108 bits (272), Expect = 6e-29
 Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHI---SDKRLIHKDIAARNCLIS--------SDLSVKI 98
             + +     V  A Q+A G+ ++   +   +IH+D+ + N LI         S+  +KI
Sbjct: 98  SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI 157

Query: 99  SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMP 158
           +  GL+++ ++       +A     W+  E +    FS  SDV++Y  L+WE+   GE+P
Sbjct: 158 TDFGLAREWHRTTKM---SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT-GEVP 213

Query: 159 FPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           F  +    V   +   KL     S  PE    L E C +P PH RP+F +I+ QL+ 
Sbjct: 214 FRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  108 bits (271), Expect = 2e-28
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 29/204 (14%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
            G L+  +       K               SQ V+ A  +A G+ ++    +IH+D+ +
Sbjct: 91  GGTLRGII-------KSMDSQ-------YPWSQRVSFAKDIASGMAYLHSMNIIHRDLNS 136

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-------------RWLPYEAVFD 132
            NCL+  + +V ++  GL++    ++        L                W+  E +  
Sbjct: 137 HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING 196

Query: 133 DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH-SSKTPEYITSL 191
             +  K DV+++  ++ EI  +     PD     +   L  +    ++     P     +
Sbjct: 197 RSYDEKVDVFSFGIVLCEIIGRVN-ADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPI 255

Query: 192 HEKCIHPHPHQRPTFPSIVTQLSD 215
             +C    P +RP+F  +   L  
Sbjct: 256 TVRCCDLDPEKRPSFVKLEHWLET 279

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  107 bits (268), Expect = 4e-28
 Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 16/190 (8%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLE--HISDKRLIHKDI 83
           +G L + L                    L   + ++MAY VA G+   H  +  ++H+++
Sbjct: 118 RGSLYRLLH------------KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNL 165

Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
            + N L+    +VK+   GLS+      +   ++A     W+  E + D+  + KSDVY+
Sbjct: 166 KSPNLLVDKKYTVKVCDFGLSR-LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYS 224

Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
           +  ++WE+    + P+ +L+  QV++ +  K    +        + ++ E C    P +R
Sbjct: 225 FGVILWELAT-LQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKR 283

Query: 204 PTFPSIVTQL 213
           P+F +I+  L
Sbjct: 284 PSFATIMDLL 293

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  105 bits (265), Expect = 1e-27
 Identities = 33/177 (18%), Positives = 66/177 (37%), Gaps = 15/177 (8%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS---LSGLSKDTY 108
             L  ++   +A ++  G+ ++  K ++HKD+ ++N     +  V I+   L  +S    
Sbjct: 125 IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQ 183

Query: 109 QKEYYKYRNAIL---------PLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMP 158
                                 +R L  +   D   FS  SDV+A   + +E+    E P
Sbjct: 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA-REWP 242

Query: 159 FPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           F     + ++ Q+ +            + I+ +   C      +RPTF  ++  L  
Sbjct: 243 FKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 96.2 bits (240), Expect = 3e-24
 Identities = 38/178 (21%), Positives = 80/178 (44%), Gaps = 18/178 (10%)

Query: 50  RVRSLSTSQAVTMAYQVALGLE--HISDKRLIHKDIAARNCLISS-----DLSVKISLSG 102
           +   +  S  + +   +ALG+E     +  ++H+D+ + N  + S      +  K++  G
Sbjct: 115 KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174

Query: 103 LSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE---FSTKSDVYAYACLIWEIFNKGEMPF 159
           LS+       +     +   +W+  E     E   ++ K+D Y++A +++ I   GE PF
Sbjct: 175 LSQQ----SVHSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILT-GEGPF 228

Query: 160 PDLSDDQV--LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
            + S  ++  ++ +  + L        P  + ++ E C    P +RP F  IV +LS+
Sbjct: 229 DEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 89.3 bits (222), Expect = 2e-21
 Identities = 41/197 (20%), Positives = 71/197 (36%), Gaps = 22/197 (11%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI---SDKRLIHKD 82
            G L   L                     + + A++   Q + G+ ++     K LIH+D
Sbjct: 83  GGSLYNVLHGAEPLPY------------YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130

Query: 83  IAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDV 141
           +   N L+ +  +V KI   G + D          N      W+  E      +S K DV
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDV 186

Query: 142 YAYACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHP 200
           +++  ++WE+      PF ++      +                P+ I SL  +C    P
Sbjct: 187 FSWGIILWEVI-TRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDP 245

Query: 201 HQRPTFPSIVTQLSDAM 217
            QRP+   IV  ++  M
Sbjct: 246 SQRPSMEEIVKIMTHLM 262

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 80.5 bits (199), Expect = 4e-18
 Identities = 34/201 (16%), Positives = 72/201 (35%), Gaps = 38/201 (18%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRL--------IHKDIAARNCLISSDLSVKISLSGL 103
            +L     + +AY    GL H+  +           H+D+ ++N L+  + +  I+  GL
Sbjct: 129 TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188

Query: 104 SKDTYQKEYYKYRNAILP---LRWLPYEAVFDD-------EFSTKSDVYAYACLIWEIF- 152
           +                     R++P E V D+       +    +D+Y++  ++WE+  
Sbjct: 189 AVKFISDTNEVDIPPNTRVGTKRYMPPE-VLDESLNRNHFQSYIMADMYSFGLILWEVAR 247

Query: 153 --------NKGEMPFPDLSDDQVLSQLESKKLCWK----------HSSKTPEYITSLHEK 194
                    + ++P+ DL       +   + +C K           S +    +  L  +
Sbjct: 248 RCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTE 307

Query: 195 CIHPHPHQRPTFPSIVTQLSD 215
           C   +P  R T   +   L+ 
Sbjct: 308 CWAHNPASRLTALRVKKTLAK 328

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 79.7 bits (197), Expect = 5e-18
 Identities = 34/203 (16%), Positives = 76/203 (37%), Gaps = 38/203 (18%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHI--------SDKRLIHKDIAARNCLISSDLSVKIS-- 99
           ++ +L T   + +   +A GL H+            + H+D+ ++N L+  +    I+  
Sbjct: 98  QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL 157

Query: 100 -LSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-------EFSTKSDVYAYACLIWEI 151
            L+ +   +  +        +   R++  E V D+       +   + D++A+  ++WE+
Sbjct: 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216

Query: 152 F---------NKGEMPFPDLSDDQVLSQLESKKLCWKH----------SSKTPEYITSLH 192
                        + PF D+  +    +   K +C             S  T   +  L 
Sbjct: 217 ARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLM 276

Query: 193 EKCIHPHPHQRPTFPSIVTQLSD 215
           ++C + +P  R T   I   L+ 
Sbjct: 277 KECWYQNPSARLTALRIKKTLTK 299

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 78.7 bits (194), Expect = 2e-17
 Identities = 41/231 (17%), Positives = 80/231 (34%), Gaps = 62/231 (26%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI--------SDKR 77
            G L  +L                   +++    + +A   A GL H+            
Sbjct: 124 HGSLFDYL----------------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 167

Query: 78  LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP------LRWLPYEAVF 131
           + H+D+ ++N L+  + +  I+  GL+    + +       I P       R++  E V 
Sbjct: 168 IAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRYMAPE-VL 223

Query: 132 DD-------EFSTKSDVYAYACLIWEIFNK--------------GEMPFPDLSDDQVLSQ 170
           DD       E   ++D+YA   + WEI  +               ++   D S +++   
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 283

Query: 171 LESKKL------CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           +  +KL       W  S +    +  +  +C + +   R T   I   LS 
Sbjct: 284 VCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 74.4 bits (183), Expect = 4e-16
 Identities = 30/203 (14%), Positives = 72/203 (35%), Gaps = 38/203 (18%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHI----------SDKRLIHKDIAARNCLISSDLSVKIS 99
           +   +S ++   +A  +A GL ++              + H+DI ++N L+ ++L+  I+
Sbjct: 114 KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173

Query: 100 LSGLSKDTYQKEYYKYRNAILP-LRWLP-----YEAVFDDEFSTKSDVYAYACLIWEIFN 153
             GL+      +     +  +   R++          F  +   + D+YA   ++WE+ +
Sbjct: 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233

Query: 154 ----------KGEMPF-----PDLSDDQVLSQLESKKL------CWKHSSKTPEYITSLH 192
                     +  +PF        S + +   +  KK        W         +    
Sbjct: 234 RCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYW-QKHAGMAMLCETI 292

Query: 193 EKCIHPHPHQRPTFPSIVTQLSD 215
           E+C       R +   +  +++ 
Sbjct: 293 EECWDHDAEARLSAGCVGERITQ 315

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 74.1 bits (182), Expect = 8e-16
 Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 48/213 (22%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHI---------SDKRLIHKDIAARNCLISSDLSVKISL 100
            + +     +  +A+ V  GL ++             + H+D+ +RN L+ +D +  IS 
Sbjct: 104 SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163

Query: 101 SGLSKDTYQKEYYKYRNAILP-------LRWLPYEAVFDDEFST--------KSDVYAYA 145
            GLS         +              +R++  E V +   +         + D+YA  
Sbjct: 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALG 222

Query: 146 CLIWEIFNKGE------------MPFPDL-----SDDQVLSQLESKKL------CWKHSS 182
            + WEIF +              M F        + + +   +  +K        WK +S
Sbjct: 223 LIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENS 282

Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
                +    E C       R T      ++++
Sbjct: 283 LAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 60.7 bits (147), Expect = 4e-11
 Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 17/153 (11%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
           Q+A  +E +  K L+H+D+   N   + D  VK+   GL     Q E  +     +P   
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231

Query: 125 L-------PY----EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLE 172
                         E +  + +S K D+++   +++E+       F    +  ++++ + 
Sbjct: 232 THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL----YSFSTQMERVRIITDVR 287

Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
           + K     + K P+    + +  + P P +RP 
Sbjct: 288 NLKFPLLFTQKYPQ-EHMMVQDMLSPSPTERPE 319

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 59.7 bits (145), Expect = 6e-11
 Identities = 36/192 (18%), Positives = 74/192 (38%), Gaps = 29/192 (15%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           K +LK ++            +G+  +     S  + +  Q+A  +E +  K L+H+D+  
Sbjct: 99  KENLKDWM------------NGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKP 146

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWL-------PY----EAVFDDE 134
            N   + D  VK+   GL     Q E  +     +P                 E +  + 
Sbjct: 147 SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS 206

Query: 135 FSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHE 193
           +S K D+++   +++E+      PF    +  + L+ + + K     + K P     + +
Sbjct: 207 YSHKVDIFSLGLILFELL----YPFSTQMERVRTLTDVRNLKFPPLFTQKYPC-EYVMVQ 261

Query: 194 KCIHPHPHQRPT 205
             + P P +RP 
Sbjct: 262 DMLSPSPMERPE 273

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 35/184 (19%), Positives = 75/184 (40%), Gaps = 22/184 (11%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           KG L+Q++       + + G        L    A+ +  Q+  G+++I  K+LI++D+  
Sbjct: 104 KGTLEQWI-------EKRRG------EKLDKVLALELFEQITKGVDYIHSKKLINRDLKP 150

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
            N  +     VKI   GL   + + +  + R+      ++  E +   ++  + D+YA  
Sbjct: 151 SNIFLVDTKQVKIGDFGLVT-SLKNDGKRTRSKGTLR-YMSPEQISSQDYGKEVDLYALG 208

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            ++ E+ +  +  F      +  + L    +    S    +   +L +K +   P  RP 
Sbjct: 209 LILAELLHVCDTAF---ETSKFFTDLRDGII----SDIFDKKEKTLLQKLLSKKPEDRPN 261

Query: 206 FPSI 209
              I
Sbjct: 262 TSEI 265

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 11/160 (6%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
            SL  +Q         L L H+  + L+H D+   N  +      K+   GL  +     
Sbjct: 152 ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211

Query: 112 YYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
                      P R++  E +    + T +DV++    I E+    E+P       +   
Sbjct: 212 ---AGEVQEGDP-RYMAPE-LLQGSYGTAADVFSLGLTILEVACNMELPH----GGEGWQ 262

Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
           QL    L  + ++     + S+    + P P  R T  ++
Sbjct: 263 QLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEAL 302

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 57.4 bits (138), Expect = 5e-10
 Identities = 25/192 (13%), Positives = 60/192 (31%), Gaps = 22/192 (11%)

Query: 23  PRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKD 82
           P    DL+            +   G   +  L          Q+     ++  K L+H  
Sbjct: 168 PAASVDLELLFSTLDFVYVFRGDEGILALHIL--------TAQLIRLAANLQSKGLVHGH 219

Query: 83  IAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE--FSTKSD 140
               N  I  D  + +           K   +   + +P+ + P E +      F+   +
Sbjct: 220 FTPDNLFIMPDGRLMLGDVSALW----KVGTRGPASSVPVTYAPREFLNASTATFTHALN 275

Query: 141 VYAYACLIWEIFNKGEMPFPDLSDDQ-------VLSQLESKKLCWKHSSKTPEYITSLHE 193
            +     I+ ++    +PF  ++           L    +  L +   +  P+++ +L  
Sbjct: 276 AWQLGLSIYRVWC-LFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIG 334

Query: 194 KCIHPHPHQRPT 205
           + ++    +R  
Sbjct: 335 RFLNFDRRRRLL 346

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 42/207 (20%), Positives = 80/207 (38%), Gaps = 36/207 (17%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +G L   +    KD  +           L+  Q + +   +  GLE I  K   H+D+  
Sbjct: 114 RGTLWNEI-ERLKDKGNF----------LTEDQILWLLLGICRGLEAIHAKGYAHRDLKP 162

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW------LPYEA--VFDDE--- 134
            N L+  +    +   G             R A+    W      + Y A  +F  +   
Sbjct: 163 TNILLGDEGQPVLMDLGSMN-QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHC 221

Query: 135 -FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPE---YITS 190
               ++DV++  C+++ +   GE P+     D V  + +S  L  ++    P+   + ++
Sbjct: 222 VIDERTDVWSLGCVLYAMMF-GEGPY-----DMVFQKGDSVALAVQNQLSIPQSPRHSSA 275

Query: 191 LHE---KCIHPHPHQRPTFPSIVTQLS 214
           L +     +   PHQRP  P +++QL 
Sbjct: 276 LWQLLNSMMTVDPHQRPHIPLLLSQLE 302

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 53.5 bits (128), Expect = 1e-08
 Identities = 19/165 (11%), Positives = 50/165 (30%), Gaps = 13/165 (7%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS------LSGLSK 105
           +SL     + +  QV   L  +    L+H  +   + ++     V ++        G   
Sbjct: 201 KSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARV 260

Query: 106 DTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD 165
            +     ++          + Y        +   D +A   +I+ I+   ++P    +  
Sbjct: 261 VSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW-CADLPITKDAAL 319

Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
                +      ++     P+ + +L E  +      R      +
Sbjct: 320 GGSEWI------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAM 358

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 30/164 (18%), Positives = 65/164 (39%), Gaps = 17/164 (10%)

Query: 50  RVRSLSTSQAVTMAYQVALGLE--HISDKRLIHKDIAARNCLISSDL-SVKISLSGLSKD 106
           R + +      +   Q+  GL+  H     +IH+D+   N  I+    SVKI   GL+  
Sbjct: 122 RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT- 180

Query: 107 TYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ 166
              K     +  I    ++  E ++++++    DVYA+   + E+    E P+ +  +  
Sbjct: 181 --LKRASFAKAVIGTPEFMAPE-MYEEKYDESVDVYAFGMCMLEMA-TSEYPYSECQNAA 236

Query: 167 VLSQLESKKLCWKHSSKTPEYITSLH-----EKCIHPHPHQRPT 205
            +     +++       + + +         E CI  +  +R +
Sbjct: 237 QI----YRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS 276

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 17/170 (10%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLS--GLS 104
           +  +    + +T+  Q   GL H+    ++H+D+   N LIS       +K  +S  GL 
Sbjct: 111 KDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170

Query: 105 K--DTYQKEYYKYRNAILPLRWLPYEAVFDDEF---STKSDVYAYACLIWEIFNKGEMPF 159
           K     +  + +         W+  E + +D     +   D+++  C+ + + ++G  PF
Sbjct: 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF 230

Query: 160 PDLSDDQVLSQLESKKL----CWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
                 Q    L +  L      KH          L EK I   P +RP+
Sbjct: 231 GKSLQRQANILLGACSLDCLHPEKHEDVIAR---ELIEKMIAMDPQKRPS 277

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 52.4 bits (125), Expect = 3e-08
 Identities = 24/194 (12%), Positives = 58/194 (29%), Gaps = 22/194 (11%)

Query: 23  PRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKD 82
           PR++ +L+ F         +   S     +SL     + +  QV   L  +    L+H  
Sbjct: 185 PRMQSNLQTFG--------EVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 236

Query: 83  IAARNCLISSDLSVKIS------LSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFS 136
           +   + ++     V ++        G S  +     +              +       +
Sbjct: 237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHH-PTLMT 295

Query: 137 TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCI 196
              D +     I+ I+   ++P  D +       +      ++     P+ + +L E  +
Sbjct: 296 FAFDTWTLGLAIYWIWC-ADLPNTDDAALGGSEWI------FRSCKNIPQPVRALLEGFL 348

Query: 197 HPHPHQRPTFPSIV 210
                 R      +
Sbjct: 349 RYPKEDRLLPLQAM 362

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 51.9 bits (125), Expect = 3e-08
 Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 21/184 (11%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL + +   +K  +            +          Q+   LEH+  +R++H+DI   
Sbjct: 117 GDLSRMIKHFKKQKR-----------LIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPA 165

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
           N  I++   VK+   GL +    K    +     P  ++  E + ++ ++ KSD+++  C
Sbjct: 166 NVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY-YMSPERIHENGYNFKSDIWSLGC 224

Query: 147 LIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITS-----LHEKCIHPHPH 201
           L++E+    + PF    D   L  L  KK+        P    S     L   CI+P P 
Sbjct: 225 LLYEMAA-LQSPF--YGDKMNLYSL-CKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPE 280

Query: 202 QRPT 205
           +RP 
Sbjct: 281 KRPD 284

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 51.6 bits (124), Expect = 5e-08
 Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 16/183 (8%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           GDL + + A +                    Q +    Q+ L L+H+ D++++H+DI ++
Sbjct: 108 GDLFKRINAQKG-------------VLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQ 154

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYAC 146
           N  ++ D +V++   G+++               P  +L  E   +  ++ KSD++A  C
Sbjct: 155 NIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPY-YLSPEICENKPYNNKSDIWALGC 213

Query: 147 LIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
           +++E+    +  F   S   ++ ++ S       S      + SL  +    +P  RP+ 
Sbjct: 214 VLYELCT-LKHAFEAGSMKNLVLKIISGS-FPPVSLHYSYDLRSLVSQLFKRNPRDRPSV 271

Query: 207 PSI 209
            SI
Sbjct: 272 NSI 274

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 51.2 bits (123), Expect = 5e-08
 Identities = 35/198 (17%), Positives = 64/198 (32%), Gaps = 39/198 (19%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           G L   +    +                  ++   +  QV  GL +I    L+H DI   
Sbjct: 96  GSLADAISENYRIM-----------SYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPS 144

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL--------------RWLPYEAVFD 132
           N  IS       +     +D +      ++   L                R+L  E + +
Sbjct: 145 NIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQE 204

Query: 133 DE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYIT-- 189
           +     K+D++A A  +      G  P P   D          ++      + P+ ++  
Sbjct: 205 NYTHLPKADIFALALTVVCAA--GAEPLPRNGDQW-------HEIRQGRLPRIPQVLSQE 255

Query: 190 --SLHEKCIHPHPHQRPT 205
              L +  IHP P +RP+
Sbjct: 256 FTELLKVMIHPDPERRPS 273

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 48.5 bits (116), Expect = 4e-07
 Identities = 27/180 (15%), Positives = 54/180 (30%), Gaps = 31/180 (17%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS---LSGLS 104
                +    +   +  Q+   L +I  + +IH+D+   N  I    +VKI    L+   
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166

Query: 105 KDTYQKEYYKYRNAILPLRWL------PY--------EAVFDDEFSTKSDVYAYACLIWE 150
             +        +N       L                     +E   K D+Y+   + +E
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE---KIDMYSLGIIFFE 223

Query: 151 IFNKGEMPFPDLSDDQVLSQLESKKLC-----WKHSSKTPEYITSLHEKCIHPHPHQRPT 205
           +          +    +L +L S  +        +  K       +    I   P++RP 
Sbjct: 224 MIYP---FSTGMERVNILKKLRSVSIEFPPDFDDNKMKV---EKKIIRLLIDHDPNKRPG 277

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 48.2 bits (115), Expect = 6e-07
 Identities = 32/176 (18%), Positives = 68/176 (38%), Gaps = 21/176 (11%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKI----SLSGLSKDT 107
           LS    + + YQ    ++H+  ++  +IH+D+   N L+S+  ++K+    S + +S   
Sbjct: 133 LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYP 192

Query: 108 YQKEYYKYRNAILPLRW----LPYEA--VFD----DEFSTKSDVYAYACLIWEIFNKGEM 157
                 + R  +           Y    + D         K D++A  C+++ +    + 
Sbjct: 193 DYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF-RQH 251

Query: 158 PFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
           PF    +D    ++ + K              SL    +  +P +R +   +V QL
Sbjct: 252 PF----EDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL 303

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 47.3 bits (113), Expect = 9e-07
 Identities = 31/190 (16%), Positives = 72/190 (37%), Gaps = 23/190 (12%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRL-----IHK 81
           GDL   +    K+            + L     + +  Q+ L L+    +       +H+
Sbjct: 92  GDLASVITKGTKER-----------QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR 140

Query: 82  DIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAIL--PLRWLPYEAVFDDEFSTKS 139
           D+   N  +    +VK+   GL++         +    +  P    P E +    ++ KS
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKTFVGTPYYMSP-EQMNRMSYNEKS 197

Query: 140 DVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPH 199
           D+++  CL++E+      PF   S  ++  ++   K   +   +  + +  +  + ++  
Sbjct: 198 DIWSLGCLLYELCA-LMPPFTAFSQKELAGKIREGKFR-RIPYRYSDELNEIITRMLNLK 255

Query: 200 PHQRPTFPSI 209
            + RP+   I
Sbjct: 256 DYHRPSVEEI 265

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 9e-06
 Identities = 38/229 (16%), Positives = 70/229 (30%), Gaps = 61/229 (26%)

Query: 28  DLK-QFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK---- 81
           +L  + LL TR K   D   +      SL            ++ L     K L+ K    
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLD---------HHSMTLTPDEVKSLLLKYLDC 313

Query: 82  ---DIAARNCLISSDLSVKISLSG--LSKDTYQKEYYKYRN------AI-LPLRWL-PYE 128
              D+       +     ++S+    +       + +K+ N       I   L  L P E
Sbjct: 314 RPQDLPREVLTTNP---RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370

Query: 129 --------AVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
                   +VF       + +     LIW      ++   D     V+++L    L  K 
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILL---SLIW-----FDVIKSD--VMVVVNKLHKYSLVEKQ 420

Query: 181 SSKTPEYITSLHEKCIHPHP------HQRPTFPSIVTQLSDAMCNDVNS 223
             ++   I S++ + +          H+      IV   +     D + 
Sbjct: 421 PKESTISIPSIYLE-LKVKLENEYALHRS-----IVDHYNIPKTFDSDD 463

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 44.7 bits (106), Expect = 9e-06
 Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 13/150 (8%)

Query: 65  QVALGLEHISDKRLIHKDIAARNCLISSD-LSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
           Q   GLE++  +R++H D+ A N L+SSD     +   G +         K       + 
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217

Query: 124 WLPY----EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
                   E V       K D+++  C++  + N G  P+       +  ++ S+     
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN-GCHPWTQYFRGPLCLKIASEP---P 273

Query: 180 HSSKTPEYITSLH----EKCIHPHPHQRPT 205
              + P     L     ++ +   P  R +
Sbjct: 274 PIREIPPSCAPLTAQAIQEGLRKEPVHRAS 303

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 15/114 (13%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           ++  +A+ +       L       +IH+D+   N +IS+  +VK+   G+++        
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172

Query: 114 KYR-NAIL-------PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
             +  A++       P      E    D    +SDVY+  C+++E+   GE PF
Sbjct: 173 VTQTAAVIGTAQYLSP------EQARGDSVDARSDVYSLGCVLYEVLT-GEPPF 219

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 29/174 (16%), Positives = 65/174 (37%), Gaps = 21/174 (12%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           +S+   +  +    +   +  I    ++H D+   N LI     +K+   G++       
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT 180

Query: 112 YYKYRN------------AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
               ++            AI  +           + S KSDV++  C+++ +   G+ PF
Sbjct: 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY-GKTPF 239

Query: 160 PDLSDDQVLSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPTFPSI 209
             + +   +S+L    +   H  + P+        + + C+   P QR + P +
Sbjct: 240 QQIINQ--ISKLH-AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 290

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 29/174 (16%), Positives = 65/174 (37%), Gaps = 21/174 (12%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           +S+   +  +    +   +  I    ++H D+   N LI     +K+   G++       
Sbjct: 103 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT 161

Query: 112 YYKYRN------------AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
               ++            AI  +           + S KSDV++  C+++ +   G+ PF
Sbjct: 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY-GKTPF 220

Query: 160 PDLSDDQVLSQLESKKLCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSI 209
             + +   +S+L    +   H  + P+        + + C+   P QR + P +
Sbjct: 221 QQIINQ--ISKLH-AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 271

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 15/113 (13%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
           LS   A+    Q+  G++H  D R++H+DI  +N LI S+ ++KI   G++K   +    
Sbjct: 108 LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE-TSL 166

Query: 114 KYRNAIL-------PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
              N +L       P      E    +     +D+Y+   +++E+   GE PF
Sbjct: 167 TQTNHVLGTVQYFSP------EQAKGEATDECTDIYSIGIVLYEMLV-GEPPF 212

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 42.1 bits (99), Expect = 8e-05
 Identities = 37/192 (19%), Positives = 66/192 (34%), Gaps = 32/192 (16%)

Query: 43  KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---------- 92
                   ++       +++  Q+A G+ H+   ++IH+D+  +N L+S+          
Sbjct: 101 SKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQT 160

Query: 93  ---DLSVKISLSGLSKDTYQKEYYKYRNAILPL---RWLPYEAVFDDEFSTKSDVYAYAC 146
              +L + IS  GL K     +     N   P     W   E + +            + 
Sbjct: 161 GAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI 220

Query: 147 LIW-------EIFNKGEMPFPDLSDDQ------VLSQLESKKLCWKHSSKTPEYITSLHE 193
            I+        I +KG+ PF D    +      + S  E K L  +           L  
Sbjct: 221 DIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEAT---DLIS 277

Query: 194 KCIHPHPHQRPT 205
           + I   P +RPT
Sbjct: 278 QMIDHDPLKRPT 289

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 29/174 (16%), Positives = 65/174 (37%), Gaps = 21/174 (12%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           +S+   +  +    +   +  I    ++H D+   N LI     +K+   G++       
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT 208

Query: 112 YYKYRN------------AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
               ++            AI  +           + S KSDV++  C+++ +   G+ PF
Sbjct: 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY-GKTPF 267

Query: 160 PDLSDDQVLSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPTFPSI 209
             + +   +S+L    +   H  + P+        + + C+   P QR + P +
Sbjct: 268 QQIINQ--ISKLH-AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 318

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 19/164 (11%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS---LSGLSKD 106
               L  +Q  T+  ++  GL+++  ++ IH+DI A N L+S    VK++   ++G   D
Sbjct: 112 EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171

Query: 107 TYQKEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
           T  K     RN  +  P  W+  E +    + +K+D+++      E+   GE P  +L  
Sbjct: 172 TQIK-----RNTFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHP 224

Query: 165 DQVL---SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            +VL    +     L   +S    E++    E C++  P  RPT
Sbjct: 225 MKVLFLIPKNNPPTLEGNYSKPLKEFV----EACLNKEPSFRPT 264

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 33/123 (26%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI---------SLSGLS 104
           L+  +AV +  Q+   L+        H+D+   N L+S+D    +         +   L+
Sbjct: 131 LAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT 190

Query: 105 KDTYQKEYYKYRNAIL-------PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEM 157
           +              +       P      E   +   + ++D+YA  C+++E    G  
Sbjct: 191 QL----------GNTVGTLYYMAP------ERFSESHATYRADIYALTCVLYECLT-GSP 233

Query: 158 PFP 160
           P+ 
Sbjct: 234 PYQ 236

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 32/173 (18%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           ++      +  T   ++A  L +   KR+IH+DI   N L+ S   +KI+  G S     
Sbjct: 102 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161

Query: 110 K---------EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
                     +Y            LP E +       K D+++   L +E F  G+ PF 
Sbjct: 162 SRRTDLCGTLDY------------LPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFE 208

Query: 161 DLSDDQVLSQLESKKLCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSI 209
             +  +   ++   +         P+++T     L  + +  +P QRP    +
Sbjct: 209 ANTYQETYKRISRVEF------TFPDFVTEGARDLISRLLKHNPSQRPMLREV 255

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS---LSGLS 104
               R L+  Q   +  Q+   L  +  KR+IH+D+ A N L++ +  ++++   +S  +
Sbjct: 108 LELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167

Query: 105 KDTYQK 110
             T QK
Sbjct: 168 LKTLQK 173

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 19/58 (32%), Positives = 29/58 (50%)

Query: 41  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 98
           K     G+ +   L  S   T+  +V  GLE++     IH+D+ A N L+  D SV+I
Sbjct: 105 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 162

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 38.9 bits (91), Expect = 7e-04
 Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 37/176 (21%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS---LSGLSKD 106
           +  +L       +  ++  GL H+   ++IH+DI  +N L++ +  VK+    +S     
Sbjct: 122 KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181

Query: 107 TYQKEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIW-------EIFNKGEM 157
           T  +     RN  +  P  W+  E +  DE    +  Y +   +W       E+  +G  
Sbjct: 182 TVGR-----RNTFIGTPY-WMAPEVIACDENPDAT--YDFKSDLWSLGITAIEMA-EGAP 232

Query: 158 PFPDLSDDQVL--------SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
           P  D+   + L         +L+SKK  W  S K   +I    E C+  +  QRP 
Sbjct: 233 PLCDMHPMRALFLIPRNPAPRLKSKK--W--SKKFQSFI----ESCLVKNHSQRPA 280

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 38.9 bits (91), Expect = 7e-04
 Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 27/165 (16%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS---KDTYQK 110
           L+  Q  T+   V   L ++  + +IH+DI + + L++ D  VK+S  G          K
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 197

Query: 111 EYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
                R +++  P  W+  E +    ++T+ D+++   ++ E+ + GE P+   S  Q +
Sbjct: 198 -----RKSLVGTPY-WMAPEVISRSLYATEVDIWSLGIMVIEMVD-GEPPYFSDSPVQAM 250

Query: 169 --------SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
                    +L++     K S    +++    E+ +   P +R T
Sbjct: 251 KRLRDSPPPKLKNSH---KVSPVLRDFL----ERMLVRDPQERAT 288

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	223
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.98
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.98
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.98
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.98
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.98
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.98
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.98
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.98
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.98
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.98
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.98
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.98
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.98
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.97
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.97
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.97
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.97
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.97
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.97
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.97
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.97
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.97
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.97
3uqc_A	286	Probable conserved transmembrane protein; structur	99.95
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.95
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.94
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.89
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.7
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.51
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.27
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.93
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	98.43
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.07
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.84
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.77
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.3
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.25
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.58
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	95.97
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.31
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	93.05
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	92.94
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	92.73
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	91.8
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	91.32
3ats_A	357	Putative uncharacterized protein; hypothetical pro	91.16
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	91.16
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	91.04
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	90.64
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	89.87
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	89.45
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	88.71
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	86.53
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	86.11
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	86.1
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	83.88

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.1e-46  Score=297.83  Aligned_cols=201  Identities=28%  Similarity=0.505  Sum_probs=161.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|||.++|+..+...............++++.+++.++.||++||.|||+++|+||||||+|||++.++.+
T Consensus       118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcE
Confidence            44899999999999999876543222222222234679999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ||+|||+++...... ........+|+.|+|||.+.+..++.++|||||||++|||+|.|+.||.+....+....+..+ 
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g-  276 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG-  276 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHT-
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-
Confidence            999999998654433 222345678999999999999999999999999999999995599999999998888888776 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      .+++.+..+++++.+++.+||+.||++|||++||+++|+.+.+
T Consensus       277 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          277 RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            4566778899999999999999999999999999999998765

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4.3e-48  Score=308.16  Aligned_cols=205  Identities=29%  Similarity=0.499  Sum_probs=166.8

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSG-SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL   94 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~-~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~   94 (223)
                      ...+|||||++|||.++|+..+........ ........+++.+++.++.||++||.|||+++++||||||+|||++.++
T Consensus       143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~  222 (353)
T 4ase_A          143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN  222 (353)
T ss_dssp             CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCC
Confidence            355899999999999999876542211100 0011234689999999999999999999999999999999999999999


Q ss_pred             CeEEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH
Q psy15108         95 SVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ-VLSQLE  172 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~-~~~~~~  172 (223)
                      .+||+|||+++...... ........+|+.|+|||.+.+..|+.++|||||||++|||+|.|..||.+....+ ....+.
T Consensus       223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~  302 (353)
T 4ase_A          223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK  302 (353)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH
T ss_pred             CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHH
Confidence            99999999998654332 2223445678999999999999999999999999999999966999999876544 444454


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhcc
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDV  221 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~  221 (223)
                      .+ .+++.+..+++++.++|..||+.||++|||+++++++|+++++.+.
T Consensus       303 ~g-~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~  350 (353)
T 4ase_A          303 EG-TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA  350 (353)
T ss_dssp             HT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             cC-CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence            44 5667778899999999999999999999999999999999987543

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.3e-46  Score=293.56  Aligned_cols=200  Identities=30%  Similarity=0.534  Sum_probs=167.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|||.++|+..+.......  .......+++.+++.++.||++||.|||+++|+||||||+|||++.++.+
T Consensus        90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~--~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~  167 (299)
T 4asz_A           90 LIMVFEYMKHGDLNKFLRAHGPDAVLMA--EGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV  167 (299)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSHHHHHC------CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCE
T ss_pred             EEEEEEcCCCCcHHHHHHhcCccccccc--ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcE
Confidence            4489999999999999987643111000  00123469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ||+|||+++........ ......+|+.|+|||.+.+..|+.++|||||||++|||+|.|+.||.+.+..++...+..+ 
T Consensus       168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~-  246 (299)
T 4asz_A          168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG-  246 (299)
T ss_dssp             EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT-
T ss_pred             EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-
Confidence            99999999755433321 2233467899999999999999999999999999999995599999999999998888877 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ..++.+..+|+++.+++.+||+.||++|||++++++.|+++.+.
T Consensus       247 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          247 RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            44566788999999999999999999999999999999887653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=4.3e-46  Score=291.86  Aligned_cols=199  Identities=30%  Similarity=0.540  Sum_probs=167.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~-~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+|||||++|||.++|+.++....... .........+++.+++.++.||++||.|||+++++||||||+|||++.++.
T Consensus       104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCC
Confidence            4589999999999999986543211100 011122356999999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +||+|||+++...... ........+|+.|+|||.+.+..++.++|||||||++|||+|.|..||.+.+..++...+..+
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~  263 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR  263 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTT
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            9999999998654433 222345678899999999999999999999999999999996689999999999888888776


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                       ...+.+..+|+++.+++..||+.||++|||+++|+++|+..
T Consensus       264 -~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          264 -QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             -CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence             45566788999999999999999999999999999999753

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.3e-45  Score=290.98  Aligned_cols=187  Identities=16%  Similarity=0.179  Sum_probs=159.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC-C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-S   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~-~   95 (223)
                      ..+|||||++|+|.++|++.+.               +++..+..++.||+.||.|||+++|+||||||+|||++.++ .
T Consensus       125 ~~ivmEy~~gg~L~~~l~~~~~---------------l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~  189 (336)
T 4g3f_A          125 VNIFMELLEGGSLGQLIKQMGC---------------LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR  189 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHHSS---------------CCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCC
T ss_pred             EEEEEeccCCCcHHHHHHHcCC---------------CCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCE
Confidence            4489999999999999987644               99999999999999999999999999999999999999887 5


Q ss_pred             eEEcCCCCCcccchhhh----hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         96 VKISLSGLSKDTYQKEY----YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +||+|||+++.......    .......||+.|+|||.+.+..|+.++||||+||++|+|+ +|..||.+.+..++...+
T Consensus       190 vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyeml-tG~~Pf~~~~~~~~~~~i  268 (336)
T 4g3f_A          190 AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML-NGCHPWTQYFRGPLCLKI  268 (336)
T ss_dssp             EEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSSTTTCCSCCHHHH
T ss_pred             EEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHH-HCcCCCCCCCHHHHHHHH
Confidence            99999999986543321    1223457999999999999999999999999999999999 799999988777777777


Q ss_pred             HhCcccC-CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        172 ESKKLCW-KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       172 ~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ....... ..+..+++++.+++.+||+.||.+|||+.|++++|.+++.+
T Consensus       269 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~  317 (336)
T 4g3f_A          269 ASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE  317 (336)
T ss_dssp             HHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence            6654332 35678899999999999999999999999999999988754

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=4.5e-45  Score=285.24  Aligned_cols=186  Identities=22%  Similarity=0.361  Sum_probs=150.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|||.++|+..+              .++++.+++.++.||++||.|||+++|+||||||+|||++.++.+
T Consensus       106 ~~iVmEy~~gGsL~~~l~~~~--------------~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~  171 (307)
T 3omv_A          106 LAIVTQWCEGSSLYKHLHVQE--------------TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTV  171 (307)
T ss_dssp             CEEEEECCSSCBHHHHHHTSC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEE
T ss_pred             EEEEEEcCCCCCHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcE
Confidence            458999999999999998643              369999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCccccccccccccc---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-H
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFD---DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ-L  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~---~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~-~  171 (223)
                      ||+|||+|+...... ........||+.|+|||.+..   .+|+.++|||||||++|||+ +|+.||.+.+....... +
T Consensus       172 Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ell-tg~~Pf~~~~~~~~~~~~~  250 (307)
T 3omv_A          172 KIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM-TGELPYSHINNRDQIIFMV  250 (307)
T ss_dssp             EECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHH-HSSCTTTTCCCHHHHHHHH
T ss_pred             EEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHH-HCCCCCCCCChHHHHHHHH
Confidence            999999997654322 222345678999999999863   35899999999999999999 69999988766544444 3


Q ss_pred             HhCcccC---CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        172 ESKKLCW---KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       172 ~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ..+...+   ..+..+++++.+++.+||+.||++|||+++++++|+.+.
T Consensus       251 ~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~  299 (307)
T 3omv_A          251 GRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             HTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred             hcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            3332221   234578999999999999999999999999999987653

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=3.5e-45  Score=289.88  Aligned_cols=180  Identities=21%  Similarity=0.285  Sum_probs=159.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|||.++|+..+.             ..+++.+++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        98 ~yiVmEy~~gg~L~~~i~~~~~-------------~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~v  164 (350)
T 4b9d_A           98 LYIVMDYCEGGDLFKRINAQKG-------------VLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTV  164 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTT-------------CCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCE
T ss_pred             EEEEEeCCCCCcHHHHHHHcCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCE
Confidence            3489999999999999987654             468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++....... ......||+.|+|||.+.+..|+.++||||+||++|+|+ +|..||.+.+..+++.++.....
T Consensus       165 Kl~DFGla~~~~~~~~-~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyeml-tG~~PF~~~~~~~~~~~i~~~~~  242 (350)
T 4b9d_A          165 QLGDFGIARVLNSTVE-LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELC-TLKHAFEAGSMKNLVLKIISGSF  242 (350)
T ss_dssp             EECSTTEESCCCHHHH-HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHTCC
T ss_pred             EEcccccceeecCCcc-cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCcCHHHHHHHHHcCCC
Confidence            9999999986644321 234457899999999999999999999999999999999 79999999999888888877643


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       ++.+..+++++++||.+||+.||++|||++|+++|
T Consensus       243 -~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          243 -PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             34566789999999999999999999999999875

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.1e-44  Score=282.66  Aligned_cols=176  Identities=16%  Similarity=0.230  Sum_probs=156.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||.+|+|.++|++.+.               +++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus       107 ~yivmEy~~gG~L~~~i~~~~~---------------l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~v  171 (311)
T 4aw0_A          107 LYFGLSYAKNGELLKYIRKIGS---------------FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI  171 (311)
T ss_dssp             EEEEECCCTTEEHHHHHHHHSS---------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCE
T ss_pred             EEEEEecCCCCCHHHHHHHcCC---------------CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCE
Confidence            3489999999999999987644               9999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ||+|||+++...... ........||+.|+|||.+.+..|+.++|+||+||++|+|+ +|..||.+.+..++...+....
T Consensus       172 Kl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml-~G~~PF~~~~~~~~~~~i~~~~  250 (311)
T 4aw0_A          172 QITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEGLIFAKIIKLE  250 (311)
T ss_dssp             EECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHTC
T ss_pred             EEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHcCC
Confidence            999999998654322 22234568999999999999999999999999999999999 7999999999999988888765


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV  210 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  210 (223)
                      +.  .+..+++++++|+.+||+.||++|||++|++
T Consensus       251 ~~--~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          251 YD--FPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             CC--CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             CC--CCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            43  4567899999999999999999999999864

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=4.1e-44  Score=283.34  Aligned_cols=178  Identities=16%  Similarity=0.245  Sum_probs=155.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .-+|||||++|+|.++++.                ..+++.++..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus       146 ~~ivmEy~~gg~L~~~l~~----------------~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~v  209 (346)
T 4fih_A          146 LWVVMEFLEGGALTDIVTH----------------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV  209 (346)
T ss_dssp             EEEEECCCTTEEHHHHHHH----------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCE
T ss_pred             EEEEEeCCCCCcHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCE
Confidence            3489999999999999975                248999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++...... .......||+.|+|||++.+..|+.++||||+||++|+|+ +|..||.+.+..+.+..+.....
T Consensus       210 Kl~DFGla~~~~~~~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml-~G~~PF~~~~~~~~~~~i~~~~~  287 (346)
T 4fih_A          210 KLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV-DGEPPYFNEPPLKAMKMIRDNLP  287 (346)
T ss_dssp             EECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCHHHHHHHHHHSSC
T ss_pred             EEecCcCceecCCCC-CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCcCHHHHHHHHHcCCC
Confidence            999999997653322 1234568999999999999899999999999999999999 79999999998888888776532


Q ss_pred             -cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 -CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       .......+++++++|+.+||+.||++|||++|+++|
T Consensus       288 ~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          288 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence             223345688999999999999999999999999876

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=4.6e-44  Score=279.01  Aligned_cols=177  Identities=19%  Similarity=0.239  Sum_probs=154.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|||.++|++.+.               +++.++..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus       101 ~~ivmEy~~gg~L~~~l~~~~~---------------l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~v  165 (304)
T 3ubd_A          101 LYLILDFLRGGDLFTRLSKEVM---------------FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHI  165 (304)
T ss_dssp             EEEEECCCTTCEEHHHHHHHCC---------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCE
T ss_pred             EEEEEEcCCCCCHHHHHHhcCC---------------CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCE
Confidence            4489999999999999987644               9999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      |++|||+++...... .......||+.|+|||.+.+..|+.++||||+||++|+|+ +|..||.+.+..+....+.....
T Consensus       166 Kl~DFGla~~~~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyeml-tG~~PF~~~~~~~~~~~i~~~~~  243 (304)
T 3ubd_A          166 KLTDFGLSKESIDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML-TGTLPFQGKDRKETMTMILKAKL  243 (304)
T ss_dssp             EEESSEEEEC------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             EecccccceeccCCC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHH-hCCCCCCCcCHHHHHHHHHcCCC
Confidence            999999997543322 1234567999999999999999999999999999999999 79999999999998888877644


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTF-----PSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~ll~~  212 (223)
                        ..+..+++++++++.+||+.||++|||+     +|+++|
T Consensus       244 --~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          244 --GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             --CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred             --CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence              3466789999999999999999999984     677764

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-43  Score=275.55  Aligned_cols=175  Identities=19%  Similarity=0.285  Sum_probs=148.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCCCCCeeeec-CC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISS-DL   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~~~nil~~~-~~   94 (223)
                      .+|||||.+|+|.++|+..+               .+++..+..++.||++||.|||+++  |+||||||.|||++. ++
T Consensus       105 ~lvmEy~~gg~L~~~l~~~~---------------~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g  169 (290)
T 3fpq_A          105 VLVTELMTSGTLKTYLKRFK---------------VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTG  169 (290)
T ss_dssp             EEEEECCCSCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTS
T ss_pred             EEEEeCCCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCC
Confidence            47899999999999998764               4999999999999999999999998  999999999999974 78


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHh
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES  173 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-~~~~~~~~~  173 (223)
                      .+||+|||+|+.....   ......||+.|+|||.+. ..|+.++|||||||++|+|+ +|..||.+... ..+...+..
T Consensus       170 ~vKl~DFGla~~~~~~---~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyell-tg~~Pf~~~~~~~~~~~~i~~  244 (290)
T 3fpq_A          170 SVKIGDLGLATLKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMA-TSEYPYSECQNAAQIYRRVTS  244 (290)
T ss_dssp             CEEECCTTGGGGCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHH-HSSCTTTTCSSHHHHHHHHTT
T ss_pred             CEEEEeCcCCEeCCCC---ccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHH-HCCCCCCCCCcHHHHHHHHHc
Confidence            9999999999743322   234568999999999875 46999999999999999999 79999976554 455555655


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .......+...++++++++.+||+.||++|||++|+++|
T Consensus       245 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          245 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            533334455678899999999999999999999999875

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.4e-43  Score=272.78  Aligned_cols=175  Identities=15%  Similarity=0.223  Sum_probs=146.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||| +|+|.++|.+++               .+++..+..++.||+.||.|||++||+||||||+||+++.++.+
T Consensus        88 ~~ivmEy~-~g~L~~~l~~~~---------------~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~v  151 (275)
T 3hyh_A           88 IIMVIEYA-GNELFDYIVQRD---------------KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNV  151 (275)
T ss_dssp             EEEEEECC-CEEHHHHHHHSC---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCE
T ss_pred             EEEEEeCC-CCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCE
Confidence            34889998 789999998754               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      |++|||+++......  ......||+.|+|||.+.+..+ +.++||||+||++|+|+ +|..||.+.+..+....+....
T Consensus       152 kl~DFGla~~~~~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~ll-tg~~PF~~~~~~~~~~~i~~~~  228 (275)
T 3hyh_A          152 KIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML-CRRLPFDDESIPVLFKNISNGV  228 (275)
T ss_dssp             EECCSSCC-----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHTC
T ss_pred             EEeecCCCeecCCCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHcCC
Confidence            999999997654332  2345679999999999988876 57899999999999999 7999999988888888887765


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..  .+..+++++++++.+||+.||++|||++|+++|
T Consensus       229 ~~--~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          229 YT--LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             CC--CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             CC--CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            43  456789999999999999999999999999986

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=3.8e-43  Score=284.20  Aligned_cols=178  Identities=16%  Similarity=0.245  Sum_probs=156.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .-+|||||.+|+|.++++.                ..+++.++..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus       223 ~~iVmEy~~gG~L~~~i~~----------------~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~v  286 (423)
T 4fie_A          223 LWVVMEFLEGGALTDIVTH----------------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRV  286 (423)
T ss_dssp             EEEEEECCTTEEHHHHHHH----------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCE
T ss_pred             EEEEEeCCCCCcHHHHHhc----------------cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCE
Confidence            3489999999999999964                248999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++...... .......||+.|+|||++.+..|+.++||||+||++|+|+ +|..||.+.+..+.+..+.....
T Consensus       287 Kl~DFGla~~~~~~~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml-~G~~PF~~~~~~~~~~~i~~~~~  364 (423)
T 4fie_A          287 KLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV-DGEPPYFNEPPLKAMKMIRDNLP  364 (423)
T ss_dssp             EECCCTTCEECCSSC-CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCHHHHHHHHHHSCC
T ss_pred             EEecCccceECCCCC-ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCcCHHHHHHHHHcCCC
Confidence            999999997653322 1234568999999999999999999999999999999999 79999999998888888776532


Q ss_pred             -cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 -CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       .......+++++++||.+||+.||++|||++|+++|
T Consensus       365 ~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          365 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             CCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence             233456789999999999999999999999999876

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.8e-41  Score=265.84  Aligned_cols=185  Identities=19%  Similarity=0.243  Sum_probs=143.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC--------CcccCCCCCCCee
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK--------RLIHKDIAARNCL   89 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------~i~H~di~~~nil   89 (223)
                      .+|||||++|||.++|+..                +++++.+.+++.|+++||.|||++        +|+||||||+|||
T Consensus        77 ~lV~Ey~~~gsL~~~l~~~----------------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NIL  140 (303)
T 3hmm_A           77 WLVSDYHEHGSLFDYLNRY----------------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL  140 (303)
T ss_dssp             EEEEECCTTCBHHHHHHHC----------------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEE
T ss_pred             EEEecCCCCCcHHHHHHhC----------------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEE
Confidence            4899999999999999752                589999999999999999999987        9999999999999


Q ss_pred             eecCCCeEEcCCCCCcccchhhh---hhhhcCCcccccccccccccC------CCCcccchHHHHHHHHHHHhCCCCC--
Q psy15108         90 ISSDLSVKISLSGLSKDTYQKEY---YKYRNAILPLRWLPYEAVFDD------EFSTKSDVYAYACLIWEIFNKGEMP--  158 (223)
Q Consensus        90 ~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~------~~~~~~Di~slG~il~~l~~~~~~p--  158 (223)
                      ++.++.+||+|||+++.......   .......+|+.|+|||.+.+.      .++.++|||||||++|||+ +|..|  
T Consensus       141 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~-tg~~~~~  219 (303)
T 3hmm_A          141 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA-RRCSIGG  219 (303)
T ss_dssp             ECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHH-HTBCBTT
T ss_pred             ECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHH-HCCCCCC
Confidence            99999999999999976543321   112345789999999998654      3567899999999999999 56544  


Q ss_pred             --------CCCC-----CHHHHHHHHHhCcccCCCCC-----CChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        159 --------FPDL-----SDDQVLSQLESKKLCWKHSS-----KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       159 --------~~~~-----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                              |.+.     ........+.....++..+.     .+++.+.+++.+||+.||++|||++|+++.|+++.++
T Consensus       220 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          220 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             BCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence                    3322     22334444444444443332     2345788999999999999999999999999988654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=8.9e-41  Score=260.96  Aligned_cols=177  Identities=19%  Similarity=0.288  Sum_probs=132.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|||||.+|+|.++++..+.            ....++..++.++.||++||.|||++||+||||||+|||++.++.+||
T Consensus        92 ivmE~~~gg~L~~~l~~~~~------------~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl  159 (299)
T 4g31_A           92 IQMQLCRKENLKDWMNGRCT------------IEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV  159 (299)
T ss_dssp             EEEECCCSCCHHHHHHTCCS------------GGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             EEEecCCCCcHHHHHHhcCC------------CChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEE
Confidence            78999999999999986533            124567788999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhh-----------hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-HH
Q psy15108         99 SLSGLSKDTYQKEY-----------YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQ  166 (223)
Q Consensus        99 ~df~~~~~~~~~~~-----------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-~~  166 (223)
                      +|||+++.......           .......||+.|+|||.+.+..|+.++||||+||++|||+ +   ||..... ..
T Consensus       160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell-~---Pf~~~~~~~~  235 (299)
T 4g31_A          160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL-Y---PFSTQMERVR  235 (299)
T ss_dssp             CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHH-S---CCSSHHHHHH
T ss_pred             ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHc-c---CCCCccHHHH
Confidence            99999986543221           1123457899999999999999999999999999999999 4   7754322 22


Q ss_pred             HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+..... ++.....++...+++.+||+.||++|||+.|+++|
T Consensus       236 ~~~~~~~~~~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          236 TLTDVRNLKF-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN  280 (299)
T ss_dssp             HHHHHHTTCC-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhcCCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            2333333211 11112234567889999999999999999999875

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=263.76  Aligned_cols=178  Identities=16%  Similarity=0.210  Sum_probs=146.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      -+|||||. |+|.++|...               +.+++..+..++.||+.||.|||++||+||||||.|||++.++.+|
T Consensus       135 ~ivmE~~~-g~L~~~i~~~---------------~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~K  198 (398)
T 4b99_A          135 YVVLDLME-SDLHQIIHSS---------------QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELK  198 (398)
T ss_dssp             EEEEECCS-EEHHHHHTSS---------------SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEE
T ss_pred             EEEEeCCC-CCHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEE
Confidence            38899995 7899999754               3599999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh---hhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         98 ISLSGLSKDTYQKE---YYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        98 l~df~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      ++|||+++......   ........||+.|+|||++.+.. ++.++||||+||++|+|+ +|..||.+.+....+..+..
T Consensus       199 i~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell-~G~~pF~g~~~~~~l~~I~~  277 (398)
T 4b99_A          199 IGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFPGKNYVHQLQLIMM  277 (398)
T ss_dssp             ECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH-HTSCSSCCSSHHHHHHHHHH
T ss_pred             EeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHH-HCCCCCCCCCHHHHHHHHHH
Confidence            99999998654332   11234568999999999987654 688999999999999999 79999999888777766643


Q ss_pred             CcccCC-----------------------------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWK-----------------------------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~-----------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+.                             ..+..++++++|+.+||+.||.+|||++|+++|
T Consensus       278 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          278 VLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             HHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             hcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            211110                             013457889999999999999999999999876

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1e-38  Score=255.46  Aligned_cols=175  Identities=17%  Similarity=0.161  Sum_probs=136.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC-CCeE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVK   97 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~-~~~~   97 (223)
                      +||||+++|+|.++++                  .+++.++..++.||+.||.|||++||+||||||+|||++.+ +.+|
T Consensus        97 lvmE~~~g~~L~~~~~------------------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~k  158 (361)
T 4f9c_A           97 IAMPYLEHESFLDILN------------------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYA  158 (361)
T ss_dssp             EEEECCCCCCHHHHHT------------------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEE
T ss_pred             EEEeCCCcccHHHHHc------------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEE
Confidence            8899999999999993                  48999999999999999999999999999999999999877 7899


Q ss_pred             EcCCCCCcccchhh---------------------------hhhhhcCCcccccccccccccCC-CCcccchHHHHHHHH
Q psy15108         98 ISLSGLSKDTYQKE---------------------------YYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIW  149 (223)
Q Consensus        98 l~df~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~  149 (223)
                      ++|||+|+......                           ........||+.|+|||++.+.. ++.++|+||+||++|
T Consensus       159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~  238 (361)
T 4f9c_A          159 LVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL  238 (361)
T ss_dssp             ECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred             ECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHH
Confidence            99999997432211                           01123457899999999987754 889999999999999


Q ss_pred             HHHhCCCCCCCCCC-HHHHHHHHHhC----------------------------------------------------cc
Q psy15108        150 EIFNKGEMPFPDLS-DDQVLSQLESK----------------------------------------------------KL  176 (223)
Q Consensus       150 ~l~~~~~~p~~~~~-~~~~~~~~~~~----------------------------------------------------~~  176 (223)
                      +|+ +|+.||.... ....+..+..-                                                    ..
T Consensus       239 ell-~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  317 (361)
T 4f9c_A          239 SLL-SGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHAT  317 (361)
T ss_dssp             HHH-HTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC------------------
T ss_pred             HHH-HCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccc
Confidence            999 7999985443 33322222110                                                    00


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ........++++++|+.+||+.||++|||++|+++|
T Consensus       318 ~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~H  353 (361)
T 4f9c_A          318 NLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLH  353 (361)
T ss_dssp             ----CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             cccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            011123567889999999999999999999999875

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=8.3e-39  Score=270.17  Aligned_cols=174  Identities=18%  Similarity=0.262  Sum_probs=148.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      -+|||||.||+|.++|+..+.               +++..+..++.||+.||.|||++||+||||||.|||++.+|.+|
T Consensus       268 ylVmEy~~GGdL~~~l~~~~~---------------l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vK  332 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHGV---------------FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR  332 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHCC---------------CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEE
T ss_pred             EEEEecCCCCcHHHHHHhcCC---------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEE
Confidence            388999999999999987644               99999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCC---CHHHHHHHHHh
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDL---SDDQVLSQLES  173 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~---~~~~~~~~~~~  173 (223)
                      |+|||+++......   .....||+.|+|||++.. ..|+.++|+||+||++|+|+ +|..||.+.   +..++...+..
T Consensus       333 L~DFGlA~~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmL-tG~~PF~~~~~~~~~~i~~~i~~  408 (689)
T 3v5w_A          333 ISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-RGHSPFRQHKTKDKHEIDRMTLT  408 (689)
T ss_dssp             ECCCTTCEECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHH-HSSCTTCGGGCCCHHHHHHHHHH
T ss_pred             ecccceeeecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHhhcC
Confidence            99999997654322   345689999999999864 57999999999999999999 799999754   33344444444


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                      ..  ...+..+++++++||.+||+.||.+|++     ++|+++|
T Consensus       409 ~~--~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H  450 (689)
T 3v5w_A          409 MA--VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  450 (689)
T ss_dssp             CC--CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred             CC--CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence            43  3446678999999999999999999998     6888765

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=5.8e-39  Score=270.77  Aligned_cols=179  Identities=18%  Similarity=0.214  Sum_probs=156.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC--C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD--L   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~--~   94 (223)
                      ..+|||||.+|+|.++|....              ..+++.++..++.||++||.|||+++|+||||||.||+++.+  +
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~~--------------~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~  294 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADEH--------------NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN  294 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCTT--------------SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCC
T ss_pred             EEEEEeecCCCcHHHHHHHhC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCC
Confidence            348899999999999996432              359999999999999999999999999999999999999854  7


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .+||+|||+++......  ......||+.|+|||++.+..|+.++|+||+||++|+|+ +|..||.+.+..+.+..+...
T Consensus       295 ~vKl~DFG~a~~~~~~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml-~G~~Pf~~~~~~~~~~~i~~~  371 (573)
T 3uto_A          295 ELKLIDFGLTAHLDPKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL-SGLSPFGGENDDETLRNVKSC  371 (573)
T ss_dssp             CEEECCCSSCEECCTTS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHH-HSCCSSCCSSHHHHHHHHHTT
T ss_pred             CEEEeeccceeEccCCC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCcCHHHHHHHHHhC
Confidence            89999999998654432  224457899999999999999999999999999999999 799999999999988888776


Q ss_pred             cccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+  ....+++++++||.+||+.||.+||++.|+++|
T Consensus       372 ~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          372 DWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             CCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            54432  235688999999999999999999999999885

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=3.4e-38  Score=244.88  Aligned_cols=189  Identities=31%  Similarity=0.519  Sum_probs=152.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+.              .+++..++.++.|+++||.|||+.|++|+||||.||+++.++.+
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  155 (281)
T 1mp8_A           90 VWIIMELCTLGELRSFLQVRKY--------------SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV  155 (281)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTT--------------TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEE
T ss_pred             cEEEEecCCCCCHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCE
Confidence            4488999999999999986543              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............+++.|+|||.+....++.++|+||+|+++|++++.|..||.+.........+... .
T Consensus       156 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~-~  234 (281)
T 1mp8_A          156 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-E  234 (281)
T ss_dssp             EECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-C
T ss_pred             EECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC-C
Confidence            999999997654433323334455678999999988889999999999999999995699999988887777777665 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      ..+.+..+++++.+++.+||+.||.+||++.+++++|++++++.
T Consensus       235 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  278 (281)
T 1mp8_A          235 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  278 (281)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            44556788999999999999999999999999999999988653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=7.8e-38  Score=241.36  Aligned_cols=189  Identities=23%  Similarity=0.483  Sum_probs=164.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++....              .+++..++.++.|+++||.|||+.|++|+||||.||+++.++.+
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~  145 (269)
T 4hcu_A           80 ICLVFEFMEHGCLSDYLRTQRG--------------LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVI  145 (269)
T ss_dssp             EEEEEECCTTCBHHHHHHTTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCE
T ss_pred             eEEEEEeCCCCcHHHHHHhcCc--------------ccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCE
Confidence            3488999999999999976433              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|+|||.+....++.++|+||+|+++++|++.|..||......+....+... .
T Consensus       146 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~-~  224 (269)
T 4hcu_A          146 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-F  224 (269)
T ss_dssp             EECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-C
T ss_pred             EeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-c
Confidence            999999997665544444445566778999999988889999999999999999994499999999988888887766 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      ....+...++.+.+++.+||+.||.+||++++++++|+++.+..
T Consensus       225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~g  268 (269)
T 4hcu_A          225 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG  268 (269)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHcc
Confidence            45556678999999999999999999999999999999988754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=4.5e-38  Score=259.59  Aligned_cols=189  Identities=29%  Similarity=0.472  Sum_probs=165.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..+.             ..+++..++.++.||+.||.|||+++++||||||+||+++.++.+
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~  323 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDEG-------------SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVC  323 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHHH-------------HTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCE
T ss_pred             cEEEEeecCCCcHHHHHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcE
Confidence            4488999999999999986543             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++..............++..|+|||.+....++.++||||||+++|+|++.|..||.+....+....+..+ .
T Consensus       324 kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-~  402 (454)
T 1qcf_A          324 KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-Y  402 (454)
T ss_dssp             EECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT-C
T ss_pred             EEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999998665444333444556788999999988889999999999999999995599999999988888887766 5


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ..+.+..+++++.++|.+||+.||++|||++++++.|++++..
T Consensus       403 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          403 RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            5666778999999999999999999999999999999987653

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.4e-37  Score=241.58  Aligned_cols=189  Identities=29%  Similarity=0.529  Sum_probs=165.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++.....              .+++..++.++.|++.||.|||+.|++|+||||.||+++.++.+
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~  159 (283)
T 3gen_A           94 IFIITEYMANGCLLNYLREMRH--------------RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVV  159 (283)
T ss_dssp             EEEEECCCTTCBHHHHHHCGGG--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCE
T ss_pred             eEEEEeccCCCcHHHHHHHhcc--------------CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCE
Confidence            3488999999999999986433              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|+|||.+.+..++.++|+||+|+++|++++.|..||...........+... .
T Consensus       160 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~  238 (283)
T 3gen_A          160 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-L  238 (283)
T ss_dssp             EECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-C
T ss_pred             EEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc-c
Confidence            999999997665544444445566778999999988889999999999999999994499999999888888877766 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      ....+...++.+.+++.+||+.||.+||++++++++|.++++++
T Consensus       239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e  282 (283)
T 3gen_A          239 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE  282 (283)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence            44556677899999999999999999999999999999998753

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.6e-38  Score=261.90  Aligned_cols=187  Identities=27%  Similarity=0.495  Sum_probs=162.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..+.             ..+++..++.++.|+++||.|||+++++||||||+||+++.++.+
T Consensus       262 ~~iv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~  328 (450)
T 1k9a_A          262 LYIVTEYMAKGSLVDYLRSRGR-------------SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA  328 (450)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCT-------------TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCE
T ss_pred             eEEEEEecCCCcHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCE
Confidence            4588999999999999987644             347999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++......    ....++..|+|||.+.+..++.++||||||+++|+|++.|..||......+....+..+ .
T Consensus       329 kl~DfG~a~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-~  403 (450)
T 1k9a_A          329 KVSDFGLTKEASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-Y  403 (450)
T ss_dssp             EECCCTTCEECC----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT-C
T ss_pred             EEeeCCCcccccccc----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999987543221    22356788999999998899999999999999999995599999988887777777665 5


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhcc
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDV  221 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~  221 (223)
                      +.+.+..+++++.++|.+||+.||.+||++.++++.|+.+...++
T Consensus       404 ~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~l  448 (450)
T 1k9a_A          404 KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHEL  448 (450)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred             CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhhc
Confidence            566778899999999999999999999999999999999887654

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.3e-37  Score=250.62  Aligned_cols=202  Identities=28%  Similarity=0.531  Sum_probs=163.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhcccc-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKD-KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+||||+.+|+|.++++..+..... ...........+++..++.++.||+.||.|||++|++||||||.||+++.++.
T Consensus       162 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~  241 (370)
T 2psq_A          162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV  241 (370)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC
T ss_pred             EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCC
Confidence            44889999999999999876431000 00000012245899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++|+|||++........ .......+++.|+|||.+.+..++.++|||||||++|+|++.|..||.+....+....+...
T Consensus       242 ~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~  321 (370)
T 2psq_A          242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG  321 (370)
T ss_dssp             EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT
T ss_pred             EEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence            99999999975433221 12233455778999999988889999999999999999995599999998888777776665


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       .....+..++.++.+++.+||+.||.+||++.+++++|++++..
T Consensus       322 -~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~  365 (370)
T 2psq_A          322 -HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  365 (370)
T ss_dssp             -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence             44556778899999999999999999999999999999998754

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.8e-37  Score=244.03  Aligned_cols=190  Identities=23%  Similarity=0.407  Sum_probs=155.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCCCCCeeeecCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~~~nil~~~~~   94 (223)
                      ..+|+||+.+|+|.++++..+.            ...+++..++.++.|+++||.|||+.|  ++||||||+||+++.++
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~  176 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKSGA------------REQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY  176 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHSTTH------------HHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTC
T ss_pred             eEEEEecCCCCcHHHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCC
Confidence            4588999999999999986432            124899999999999999999999999  99999999999999999


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++++|||++...... ........++..|+|||.+.+..++.++||||+|+++|+|+ +|..||......+....+...
T Consensus       177 ~~kL~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-tg~~Pf~~~~~~~~~~~~~~~  254 (309)
T 3p86_A          177 TVKVCDFGLSRLKAST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA-TLQQPWGNLNPAQVVAAVGFK  254 (309)
T ss_dssp             CEEECCCC------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHH-HCCCTTTTSCHHHHHHHHHHS
T ss_pred             cEEECCCCCCcccccc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhc
Confidence            9999999998743322 12233456789999999999888999999999999999999 799999999888887777655


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      ......+..+++++.+++.+||+.||.+||+++++++.|+.+++..
T Consensus       255 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          255 CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred             CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence            5666677889999999999999999999999999999999988653

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.2e-37  Score=256.91  Aligned_cols=189  Identities=29%  Similarity=0.475  Sum_probs=158.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++....             ..+++..++.++.|++.||.|||+++++||||||+||+++.++.+
T Consensus       253 ~~iv~e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~  319 (452)
T 1fmk_A          253 IYIVTEYMSKGSLLDFLKGETG-------------KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC  319 (452)
T ss_dssp             CEEEECCCTTCBHHHHHSHHHH-------------TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCE
T ss_pred             eEEEehhhcCCCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCE
Confidence            4588999999999999986543             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +|+|||+++..............++..|+|||.+....++.++||||||+++|+|++.|..||.+....+....+..+ .
T Consensus       320 kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-~  398 (452)
T 1fmk_A          320 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y  398 (452)
T ss_dssp             EECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-C
T ss_pred             EECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999997654433333344556788999999988889999999999999999995599999999988888887766 5


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      +.+.+..+++.+.++|.+||+.||++|||++++++.|++++..
T Consensus       399 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          399 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            5666778999999999999999999999999999999988754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4.1e-37  Score=236.87  Aligned_cols=189  Identities=23%  Similarity=0.490  Sum_probs=163.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+++|+|.+++...+.              .+++..++.++.|+++||.|||+.|++|+||+|+||+++.++.+
T Consensus        78 ~~lv~e~~~~~~L~~~~~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~  143 (267)
T 3t9t_A           78 ICLVTEFMEHGCLSDYLRTQRG--------------LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVI  143 (267)
T ss_dssp             CEEEECCCTTCBHHHHHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCE
T ss_pred             eEEEEeCCCCCcHHHHHhhCcc--------------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCE
Confidence            4488999999999999986533              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|+|||.+....++.++|+||+|+++|+|++.|..||......+....+... .
T Consensus       144 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-~  222 (267)
T 3t9t_A          144 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-F  222 (267)
T ss_dssp             EECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-C
T ss_pred             EEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-C
Confidence            999999987655444333344566778999999988889999999999999999994489999998888888777665 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      ....+...+..+.+++.+||+.||.+||++++++++|+++.++.
T Consensus       223 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~  266 (267)
T 3t9t_A          223 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG  266 (267)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            44456678899999999999999999999999999999988764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.6e-37  Score=246.02  Aligned_cols=189  Identities=29%  Similarity=0.448  Sum_probs=160.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++...              ..+++..++.++.|++.||.|||+.|++||||||.||+++.++.+
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~  190 (325)
T 3kul_A          125 AMIVTEYMENGSLDTFLRTHD--------------GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVC  190 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTT--------------TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCE
T ss_pred             cEEEeeCCCCCcHHHHHHhcc--------------cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCE
Confidence            348899999999999997543              359999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh--hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEYY--KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +|+|||++.........  ......++..|+|||.+.+..++.++||||||+++|+|++.|..||.+.........+...
T Consensus       191 kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~  270 (325)
T 3kul_A          191 KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG  270 (325)
T ss_dssp             EECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT
T ss_pred             EECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC
Confidence            99999999765433211  1122344667999999988889999999999999999995599999999988888877766


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                       ...+.+..+++++.+++..||+.||.+||+++++++.|+.++...
T Consensus       271 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~  315 (325)
T 3kul_A          271 -YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP  315 (325)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred             -CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence             555667788999999999999999999999999999999987653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-38  Score=254.08  Aligned_cols=188  Identities=28%  Similarity=0.588  Sum_probs=150.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.++++..+.              .+++..++.++.||++||.|||+.|++||||||+||+++.++.+
T Consensus       166 ~~lv~e~~~~g~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~  231 (373)
T 3c1x_A          166 PLVVLPYMKHGDLRNFIRNETH--------------NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV  231 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHCTTC--------------CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCE
T ss_pred             eEEEEECCCCCCHHHHHhhccc--------------CCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCE
Confidence            4478999999999999975433              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh---hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKEYY---KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +++|||+++........   ......++..|+|||.+.+..++.++||||||+++|+|++.+..||......+....+..
T Consensus       232 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~  311 (373)
T 3c1x_A          232 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ  311 (373)
T ss_dssp             EECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHT
T ss_pred             EEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHc
Confidence            99999999755332211   123345677899999998889999999999999999999558889987776666666655


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      . .....+..++..+.+++.+||+.||++||+++++++.|++++..
T Consensus       312 ~-~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          312 G-RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             T-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             C-CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            5 34455667899999999999999999999999999999998754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.4e-37  Score=239.67  Aligned_cols=188  Identities=28%  Similarity=0.509  Sum_probs=161.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.++++..+.              .+++..++.++.|+++||.|||+.|++|+||||.||+++.++.+
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~  143 (268)
T 3sxs_A           78 IYIVTEYISNGCLLNYLRSHGK--------------GLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCV  143 (268)
T ss_dssp             EEEEEECCTTCBHHHHHHHHGG--------------GCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCE
T ss_pred             eEEEEEccCCCcHHHHHHHcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCE
Confidence            3488999999999999987644              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|+|||.+.+..++.++|+||+|++++++++.|..||...........+... .
T Consensus       144 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~  222 (268)
T 3sxs_A          144 KVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG-H  222 (268)
T ss_dssp             EECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-C
T ss_pred             EEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC-C
Confidence            999999987654433222334455677999999988888999999999999999994499999998888877777665 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ....+...++.+.+++..||+.||.+|||+++++++|+.+.++
T Consensus       223 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          223 RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            4445667789999999999999999999999999999988654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=9.7e-38  Score=251.93  Aligned_cols=188  Identities=29%  Similarity=0.459  Sum_probs=160.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.++++..+.              .+++..++.++.|+++||.|||+.|++||||||+||+++.++.+
T Consensus       187 ~~lv~e~~~~g~L~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~  252 (377)
T 3cbl_A          187 IYIVMELVQGGDFLTFLRTEGA--------------RLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVL  252 (377)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGG--------------GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCE
T ss_pred             cEEEEEcCCCCCHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcE
Confidence            4488999999999999987643              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhh-hcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKY-RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||+++.......... ....++..|+|||.+....++.++||||||+++|++++.|..||.+....+....+..+ 
T Consensus       253 kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~-  331 (377)
T 3cbl_A          253 KISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG-  331 (377)
T ss_dssp             EECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTT-
T ss_pred             EECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-
Confidence            9999999875433221111 12234677999999988889999999999999999995599999999888877776665 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ...+.+..+++++.+++.+||+.||++|||++++++.|+++.+.
T Consensus       332 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            45566778899999999999999999999999999999988653

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=2.1e-38  Score=253.97  Aligned_cols=168  Identities=32%  Similarity=0.613  Sum_probs=140.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhh-hhhhhcCCcccccccccccc
Q psy15108         53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVF  131 (223)
Q Consensus        53 ~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~  131 (223)
                      .+++..++.++.|+++||.|||++|++|+||||.||+++.++.++++|||++....... ........++..|+|||.+.
T Consensus       189 ~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  268 (359)
T 3vhe_A          189 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  268 (359)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhc
Confidence            38999999999999999999999999999999999999999999999999987543322 12233455678899999998


Q ss_pred             cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHH
Q psy15108        132 DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVT  211 (223)
Q Consensus       132 ~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  211 (223)
                      +..++.++||||||+++|+|++.|..||.+...................+..+++++.+++.+||+.||.+||+++++++
T Consensus       269 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  348 (359)
T 3vhe_A          269 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE  348 (359)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            88899999999999999999944999998876544444433333455666778999999999999999999999999999


Q ss_pred             HHHHHhhhc
Q psy15108        212 QLSDAMCND  220 (223)
Q Consensus       212 ~L~~~~~~~  220 (223)
                      +|++++..+
T Consensus       349 ~L~~~~~~~  357 (359)
T 3vhe_A          349 HLGNLLQAN  357 (359)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999998754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=5e-37  Score=247.37  Aligned_cols=188  Identities=29%  Similarity=0.479  Sum_probs=151.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.++++..+.              .+++..++.++.||++||.|||+.|++||||||.||+++.++.+
T Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~  186 (373)
T 2qol_A          121 VMIVTEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVC  186 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTT--------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCE
T ss_pred             eEEEEeCCCCCcHHHHHHhCCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCE
Confidence            4488999999999999986433              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh--hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++........  .......++..|+|||.+.+..++.++||||||+++|++++.|..||...........+...
T Consensus       187 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~  266 (373)
T 2qol_A          187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG  266 (373)
T ss_dssp             EECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT
T ss_pred             EECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            9999999876543321  11122334677999999988899999999999999999995599999998888887777665


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       ...+.+..++.++.+++..||+.||.+||+++++++.|++++.+
T Consensus       267 -~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          267 -YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             -EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             -CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence             45555678899999999999999999999999999999998754

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=8e-37  Score=237.11  Aligned_cols=188  Identities=29%  Similarity=0.448  Sum_probs=157.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++...+.              .+++..+..++.|+++||.|||+.|++|+||||.||+++.++.+
T Consensus        87 ~~~v~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  152 (281)
T 3cc6_A           87 TWIIMELYPYGELGHYLERNKN--------------SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECV  152 (281)
T ss_dssp             CEEEEECCTTCBHHHHHHHHTT--------------TCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEE
T ss_pred             CEEEEecCCCCCHHHHHHhccc--------------cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcE
Confidence            3488999999999999987543              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|+|||.+....++.++|+||||+++|+|++.|..||...........+... .
T Consensus       153 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~-~  231 (281)
T 3cc6_A          153 KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG-D  231 (281)
T ss_dssp             EECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHT-C
T ss_pred             EeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcC-C
Confidence            999999987654443333344556778999999988889999999999999999994499999887777776666655 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ..+.+..+++.+.+++.+||+.||.+||++.+++++|+++...
T Consensus       232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  274 (281)
T 3cc6_A          232 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM  274 (281)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence            4455667899999999999999999999999999999987643

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.9e-37  Score=248.34  Aligned_cols=193  Identities=31%  Similarity=0.557  Sum_probs=161.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC--
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL--   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~--   94 (223)
                      ..+||||+.+|+|.++++..+..        ......+++..++.++.||++||.|||++|++||||||.||+++.++  
T Consensus       149 ~~lv~e~~~~g~L~~~l~~~~~~--------~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~  220 (367)
T 3l9p_A          149 RFILLELMAGGDLKSFLRETRPR--------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG  220 (367)
T ss_dssp             CEEEEECCTTEEHHHHHHHHSCC--------SSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTT
T ss_pred             CEEEEEeCCCCCHHHHHHhhccc--------cCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCC
Confidence            34889999999999999986531        11224699999999999999999999999999999999999998554  


Q ss_pred             -CeEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         95 -SVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        95 -~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                       .++++|||+++....... .......+++.|+|||.+.+..++.++|||||||++|+|++.|..||......+....+.
T Consensus       221 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~  300 (367)
T 3l9p_A          221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT  300 (367)
T ss_dssp             CCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             ceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence             499999999875433221 122334567889999999888999999999999999999955999999999888888777


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      .. .....+..++..+.+++.+||+.||.+||++++++++|+.+..
T Consensus       301 ~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          301 SG-GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cC-CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            66 3455567789999999999999999999999999999988754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=6.8e-37  Score=242.58  Aligned_cols=176  Identities=17%  Similarity=0.261  Sum_probs=154.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+.               +++..+..++.|+++||.|||+.|++||||||+||+++.++.+
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~~~---------------l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~  153 (328)
T 3fe3_A           89 LYLIMEYASGGEVFDYLVAHGR---------------MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNI  153 (328)
T ss_dssp             EEEEECCCTTCBHHHHHHHHCC---------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCE
T ss_pred             EEEEEECCCCCcHHHHHHHcCC---------------CCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCE
Confidence            3488999999999999987644               9999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFS-TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++.......  ......+++.|+|||.+.+..+. .++||||+||++|+|+ +|..||.+.+..+....+..+.
T Consensus       154 kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~~~~i~~~~  230 (328)
T 3fe3_A          154 KIADFGFSNEFTVGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV-SGSLPFDGQNLKELRERVLRGK  230 (328)
T ss_dssp             EECSTTCCGGGSSSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHCC
T ss_pred             EEeeccCceecCCCC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCC
Confidence            999999987543322  23456788999999999887765 7899999999999999 7999999999888888877764


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..  .+...++++.+++.+||+.||.+|||++++++|
T Consensus       231 ~~--~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          231 YR--IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             CC--CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             CC--CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            43  355678999999999999999999999999876

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-36  Score=245.86  Aligned_cols=202  Identities=32%  Similarity=0.553  Sum_probs=165.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhcccc-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKD-KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+||||+.+|+|.++++..+..... ...........+++..++.++.|++.||.|||+.|++||||||.||+++.++.
T Consensus       150 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  229 (382)
T 3tt0_A          150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV  229 (382)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC
T ss_pred             eEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCc
Confidence            44889999999999999976531110 00111112346999999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++|+|||++........ .......++..|+|||.+.+..++.++||||||+++++|++.|..||.+....+....+...
T Consensus       230 ~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~  309 (382)
T 3tt0_A          230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG  309 (382)
T ss_dssp             EEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT
T ss_pred             EEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            99999999975543221 12233456778999999998889999999999999999994499999999888888777665


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       .....+..+++++.+++.+||+.||++||++++++++|++++..
T Consensus       310 -~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          310 -HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             -CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence             45556678899999999999999999999999999999998754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=4.5e-37  Score=243.57  Aligned_cols=187  Identities=23%  Similarity=0.426  Sum_probs=158.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+|+|.+++...+.              .+++..++.++.|+++||.|||+.|++||||||.||+++.++.+
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~  156 (327)
T 3poz_A           91 VQLITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV  156 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHSTT--------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEE
T ss_pred             eEEEEEecCCCcHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCE
Confidence            3478999999999999987543              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||+++...... ........++..|+|||.+.+..++.++||||||+++|++++.|..||.+.........+... 
T Consensus       157 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-  235 (327)
T 3poz_A          157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-  235 (327)
T ss_dssp             EECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-
T ss_pred             EEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcC-
Confidence            999999987543322 112223455778999999999999999999999999999994499999988887777666655 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      ...+.+..++.++.+++.+||+.||.+||++++++++|+++..
T Consensus       236 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          236 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            4455567789999999999999999999999999999998764

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=4.1e-37  Score=258.38  Aligned_cols=189  Identities=29%  Similarity=0.475  Sum_probs=165.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++|+....             ..+++..++.++.||++||.|||+++++||||||+||+++.++.+
T Consensus       336 ~~lv~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~  402 (535)
T 2h8h_A          336 IYIVTEYMSKGSLLDFLKGETG-------------KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC  402 (535)
T ss_dssp             CEEEECCCTTEEHHHHHSHHHH-------------TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCE
T ss_pred             ceEeeehhcCCcHHHHHhhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcE
Confidence            4588999999999999986543             358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++..............++..|+|||.+....++.++||||||+++|+|++.|..||.+....+....+..+ .
T Consensus       403 kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~-~  481 (535)
T 2h8h_A          403 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y  481 (535)
T ss_dssp             EECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTT-C
T ss_pred             EEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999998665444333344566788999999988889999999999999999995599999999988888887765 5


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      +.+.+..+++++.++|.+||+.||++||+++++++.|+.++..
T Consensus       482 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          482 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence            5666778999999999999999999999999999999987653

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2e-37  Score=242.38  Aligned_cols=189  Identities=29%  Similarity=0.580  Sum_probs=158.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.++++...              ..+++..++.++.|++.||.|||+.|++|+||||.||+++.++.+
T Consensus       102 ~~~v~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~  167 (298)
T 3f66_A          102 PLVVLPYMKHGDLRNFIRNET--------------HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTV  167 (298)
T ss_dssp             CEEEEECCTTCBHHHHHHCTT--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCE
T ss_pred             eEEEEeCCCCCCHHHHHHhcc--------------cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCE
Confidence            447899999999999997543              358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh---hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKEY---YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +++|||++........   .......++..|+|||.+.+..++.++|+||+|++++++++.+..||...........+..
T Consensus       168 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~  247 (298)
T 3f66_A          168 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ  247 (298)
T ss_dssp             EECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHT
T ss_pred             EECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhc
Confidence            9999999876543321   1223445677899999998888999999999999999999557888887777666666665


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      . .....+..+++.+.+++.+||+.||.+||+++++++.|++++.+-
T Consensus       248 ~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          248 G-RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             T-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred             C-CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            5 344446678999999999999999999999999999999988653

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2e-37  Score=258.19  Aligned_cols=189  Identities=29%  Similarity=0.474  Sum_probs=163.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..+.             ..+++..++.++.||+.||.|||+++++||||||.||+++.++.+
T Consensus       291 ~~lv~E~~~~g~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~  357 (495)
T 1opk_A          291 FYIITEFMTYGNLLDYLRECNR-------------QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLV  357 (495)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCT-------------TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCE
T ss_pred             EEEEEEccCCCCHHHHHHhcCc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcE
Confidence            4488999999999999987543             468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++..............++..|+|||.+....++.++||||||+++|+|++.|..||.+.+..+....+... .
T Consensus       358 kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~  436 (495)
T 1opk_A          358 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-Y  436 (495)
T ss_dssp             EECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-C
T ss_pred             EEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999997654333223334456778999999988889999999999999999995599999998887777776655 5


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      +...+..+++++.++|.+||+.||.+||+++++++.|+.++.+
T Consensus       437 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~  479 (495)
T 1opk_A          437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  479 (495)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred             CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence            5666778999999999999999999999999999999887643

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.1e-36  Score=240.79  Aligned_cols=192  Identities=29%  Similarity=0.546  Sum_probs=155.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++++|+.+|+|.+++......         .....+++..++.++.|+++||.|||+.|++||||||.||+++.++.++
T Consensus       107 ~~v~e~~~~~~L~~~l~~~~~~---------~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~k  177 (323)
T 3qup_A          107 MVILPFMKHGDLHAFLLASRIG---------ENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVC  177 (323)
T ss_dssp             EEEEECCTTCBHHHHHHHHHC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEE
T ss_pred             EEEEEeccCCcHHHHHHhhhcc---------ccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEE
Confidence            4789999999999999876531         0112589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++........ .......++..|+|||.+.+..++.++||||+|+++|+|++.|..||.+....+....+... .
T Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-~  256 (323)
T 3qup_A          178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG-N  256 (323)
T ss_dssp             ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-C
T ss_pred             EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC-C
Confidence            999999976543332 12233455678999999988889999999999999999994499999998888887777665 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ....+..+++++.+++.+||+.||.+||++.++++.|++++..
T Consensus       257 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            4555678899999999999999999999999999999998753

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=3.2e-37  Score=244.19  Aligned_cols=188  Identities=21%  Similarity=0.359  Sum_probs=157.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|++|+.+|+|.+++...+.              .+++..++.++.|+++||.|||+.|++||||||.||+++.++.+
T Consensus        89 ~~~v~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~  154 (325)
T 3kex_A           89 LQLVTQYLPLGSLLDHVRQHRG--------------ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQV  154 (325)
T ss_dssp             EEEEEECCTTCBSHHHHHSSGG--------------GSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCE
T ss_pred             cEEEEEeCCCCCHHHHHHHccc--------------cCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeE
Confidence            3478999999999999986533              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... ........++..|+|||.+.+..++.++||||+|+++|++++.|..||.+....+....+... 
T Consensus       155 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-  233 (325)
T 3kex_A          155 QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG-  233 (325)
T ss_dssp             EECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTT-
T ss_pred             EECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcC-
Confidence            999999997653322 112234456678999999988889999999999999999994499999988877777776665 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      .....+..++.++.+++.+||+.||.+||++++++++|+++..+
T Consensus       234 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          234 ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            44555666788899999999999999999999999999988643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.3e-36  Score=240.91  Aligned_cols=188  Identities=23%  Similarity=0.431  Sum_probs=155.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+|+|.+++...+.              .+++..++.++.|++.||.|||+.|++||||||.||+++.++.+
T Consensus        91 ~~~v~~~~~~g~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~  156 (327)
T 3lzb_A           91 VQLITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV  156 (327)
T ss_dssp             EEEEECCCSSCBHHHHHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEE
T ss_pred             ceEEEEecCCCcHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCE
Confidence            3378899999999999987543              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... ........++..|+|||.+.+..++.++||||+|+++|+|++.|..||.+.........+... 
T Consensus       157 kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-  235 (327)
T 3lzb_A          157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-  235 (327)
T ss_dssp             EECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-
T ss_pred             EEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-
Confidence            999999997654322 112233455778999999998899999999999999999994499999988887777766665 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ...+.+..++.++.+++.+||+.||.+||++.++++.|+++..+
T Consensus       236 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          236 ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            44556677899999999999999999999999999999988643

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7e-37  Score=239.10  Aligned_cols=188  Identities=27%  Similarity=0.554  Sum_probs=160.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++++|+.+|+|.++++..+              ..+++..++.++.|+++||.|||+.|++|+||||.||+++.++.++
T Consensus        99 ~~v~e~~~~~~L~~~~~~~~--------------~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~k  164 (298)
T 3pls_A           99 HVLLPYMCHGDLLQFIRSPQ--------------RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVK  164 (298)
T ss_dssp             EEEECCCTTCBHHHHHHCTT--------------CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEE
T ss_pred             EEEEecccCCCHHHHHhccc--------------cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEE
Confidence            47899999999999997633              3689999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhh---hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         98 ISLSGLSKDTYQKEY---YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++|||++........   .......++..|++||.+.+..++.++|+||+|+++|+|++.+..||...........+...
T Consensus       165 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~  244 (298)
T 3pls_A          165 VADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG  244 (298)
T ss_dssp             ECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTT
T ss_pred             eCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcC
Confidence            999999975543321   12233456788999999998889999999999999999996577778777777776666655


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                       .....+..+++.+.+++.+||+.||.+|||++++++.|+++++.-
T Consensus       245 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          245 -RRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             -CCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence             445556778999999999999999999999999999999987654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=8e-37  Score=260.89  Aligned_cols=190  Identities=26%  Similarity=0.443  Sum_probs=161.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..+               .+++..++.++.||+.||.|||++|++||||||+||+++.++.+
T Consensus       444 ~~lv~E~~~~g~L~~~l~~~~---------------~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~  508 (635)
T 4fl3_A          444 WMLVMEMAELGPLNKYLQQNR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA  508 (635)
T ss_dssp             EEEEEECCTTEEHHHHHHHCT---------------TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEE
T ss_pred             EEEEEEccCCCCHHHHHhhCC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCE
Confidence            348899999999999997653               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ||+|||+++......  ........++..|+|||.+....++.++|||||||++|+|++.|..||.+....+....+..+
T Consensus       509 kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~  588 (635)
T 4fl3_A          509 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG  588 (635)
T ss_dssp             EECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred             EEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            999999987543322  112233445678999999998899999999999999999995599999999988888877776


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhccC
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN  222 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~  222 (223)
                       .....+..+++++.++|..||+.||++||+++++++.|++++.+-+|
T Consensus       589 -~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~n  635 (635)
T 4fl3_A          589 -ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN  635 (635)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHCC
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhcC
Confidence             45566778999999999999999999999999999999999876654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=2.4e-37  Score=239.72  Aligned_cols=187  Identities=27%  Similarity=0.492  Sum_probs=156.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++...+.             ..+++..++.++.|+++||.|||+.|++|+||+|.||+++.++.+
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  156 (278)
T 1byg_A           90 LYIVTEYMAKGSLVDYLRSRGR-------------SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA  156 (278)
T ss_dssp             CEEEECCCTTEEHHHHHHHHHH-------------HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCE
T ss_pred             eEEEEecCCCCCHHHHHHhccc-------------ccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcE
Confidence            4588999999999999987654             348999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++.......    ....++..|+|||.+.+..++.++|+||+|+++++|++.|..||...........+... .
T Consensus       157 ~l~Dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-~  231 (278)
T 1byg_A          157 KVSDFGLTKEASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-Y  231 (278)
T ss_dssp             EECCCCC----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT-C
T ss_pred             EEeeccccccccccc----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-C
Confidence            999999987543322    22345778999999988889999999999999999994499999988877777766655 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhcc
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDV  221 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~  221 (223)
                      ....+..+++++.+++.+||+.||.+||++.++++.|+++....+
T Consensus       232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~~  276 (278)
T 1byg_A          232 KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL  276 (278)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred             CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhhc
Confidence            455567889999999999999999999999999999999876654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.2e-36  Score=239.27  Aligned_cols=188  Identities=28%  Similarity=0.469  Sum_probs=155.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+.              .+++..++.++.|+++||.|||+.|++|+||||.||+++.++.+
T Consensus       121 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~  186 (333)
T 1mqb_A          121 MMIITEYMENGALDKFLREKDG--------------EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVC  186 (333)
T ss_dssp             EEEEEECCTTEEHHHHHHHTTT--------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCE
T ss_pred             cEEEEeCCCCCcHHHHHHhCCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcE
Confidence            3488999999999999986533              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh--hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++........  .......++..|+|||.+....++.++||||||+++|++++.|..||......+....+...
T Consensus       187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~  266 (333)
T 1mqb_A          187 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG  266 (333)
T ss_dssp             EECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT
T ss_pred             EECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCC
Confidence            9999999876543321  11222345678999999988889999999999999999994499999988888887777665


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       ...+.+..++..+.+++.+||+.||.+||+++++++.|++++..
T Consensus       267 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          267 -FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             -CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             -CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence             44555678899999999999999999999999999999988753

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=7.9e-37  Score=240.37  Aligned_cols=206  Identities=26%  Similarity=0.462  Sum_probs=161.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCC---CCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKS---GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~---~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~   93 (223)
                      ..+|+||+++|+|.+++...+.......   .........+++..++.++.|+++||.|||+.|++|+||||.||+++.+
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~  181 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG  181 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCC
Confidence            4488999999999999987643100000   0000112358999999999999999999999999999999999999999


Q ss_pred             CCeEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         94 LSVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      +.++++|||++........ .......++..|+|||.+.+..++.++||||||+++++|++.|..||.+...........
T Consensus       182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  261 (313)
T 1t46_A          182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI  261 (313)
T ss_dssp             TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred             CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh
Confidence            9999999999876543321 112234456789999999888899999999999999999944999998877554444443


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhccC
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN  222 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~  222 (223)
                      ........+..++.++.+++.+||+.||.+||++++++++|++++.+..+
T Consensus       262 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~  311 (313)
T 1t46_A          262 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN  311 (313)
T ss_dssp             HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTCC
T ss_pred             ccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhhc
Confidence            33345555677899999999999999999999999999999999987655

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=7.5e-37  Score=236.96  Aligned_cols=189  Identities=30%  Similarity=0.482  Sum_probs=162.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++.....             ..+++..++.++.|+++||.|||+.|++|+||+|.||+++.++.+
T Consensus        82 ~~~v~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~  148 (279)
T 1qpc_A           82 IYIITEYMENGSLVDFLKTPSG-------------IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC  148 (279)
T ss_dssp             CEEEEECCTTCBHHHHTTSHHH-------------HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCE
T ss_pred             cEEEEecCCCCCHHHHHhcCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCE
Confidence            4488999999999999976532             359999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|+|||.+.+..++.++|+||||+++++|++.|..||.+....+....+... .
T Consensus       149 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~  227 (279)
T 1qpc_A          149 KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-Y  227 (279)
T ss_dssp             EECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-C
T ss_pred             EECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-c
Confidence            999999987654433222234455678999999988888999999999999999994499999998888877777665 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ....+..+++++.+++.+||+.||++||+++++++.|++++..
T Consensus       228 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          228 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence            4555678899999999999999999999999999999998765

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-36  Score=241.96  Aligned_cols=202  Identities=29%  Similarity=0.548  Sum_probs=160.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccc---------cCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSK---------DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN   87 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~n   87 (223)
                      ..+||||+.+|+|.+++........         ............+++..++.++.||++||.|||+.|++|+||||.|
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N  204 (343)
T 1luf_A          125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRN  204 (343)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcce
Confidence            4488999999999999987532100         0000001112579999999999999999999999999999999999


Q ss_pred             eeeecCCCeEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy15108         88 CLISSDLSVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ  166 (223)
Q Consensus        88 il~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~  166 (223)
                      |+++.++.++++|||++........ .......++..|+|||.+.+..++.++|+||||+++|+|++.|..||.+....+
T Consensus       205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  284 (343)
T 1luf_A          205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE  284 (343)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH
Confidence            9999999999999999875433321 122345667889999999888899999999999999999944999999998888


Q ss_pred             HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ....+.... ....+..++.++.+++.+||+.||.+||++.+++++|+++...
T Consensus       285 ~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          285 VIYYVRDGN-ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             HHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred             HHHHHhCCC-cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence            887777663 3445677899999999999999999999999999999998653

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.7e-36  Score=236.88  Aligned_cols=187  Identities=22%  Similarity=0.363  Sum_probs=150.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+.              .+++..++.++.|++.||.|||+.|++|+||||.||+++.++.+
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~  153 (295)
T 3ugc_A           88 LKLIMEYLPYGSLRDYLQKHKE--------------RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV  153 (295)
T ss_dssp             CEEEEECCTTCBHHHHHHHCGG--------------GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEE
T ss_pred             eEEEEEeCCCCCHHHHHHhccc--------------ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeE
Confidence            3478999999999999987543              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---------
Q psy15108         97 KISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD---------  165 (223)
Q Consensus        97 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~---------  165 (223)
                      +++|||++.......  ........++..|+|||.+.+..++.++||||+|+++|+++ +|..|+......         
T Consensus       154 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~-~g~~~~~~~~~~~~~~~~~~~  232 (295)
T 3ugc_A          154 KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF-TYIEKSKSPPAEFMRMIGNDK  232 (295)
T ss_dssp             EECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH-HTTCTTCSHHHHHHHHHCTTC
T ss_pred             EEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHH-hcccccCCChHHHHhhhcCcc
Confidence            999999997654332  11223345667799999999889999999999999999999 677777543211         


Q ss_pred             -------HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        166 -------QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       166 -------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                             .....+... ...+.+..+++++.+++..||+.||++|||++++++.|+++.++
T Consensus       233 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          233 QGQMIVFHLIELLKNN-GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             CTHHHHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ccchhHHHHHHHHhcc-CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence                   122222222 44556778899999999999999999999999999999998754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.2e-36  Score=257.51  Aligned_cols=188  Identities=24%  Similarity=0.435  Sum_probs=158.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+              ..+++..+..++.||+.||.|||+++++||||||+||+++.++.+
T Consensus       410 ~~lv~E~~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~v  475 (613)
T 2ozo_A          410 LMLVMEMAGGGPLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYA  475 (613)
T ss_dssp             EEEEEECCTTCBHHHHHTTCT--------------TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEE
T ss_pred             eEEEEEeCCCCcHHHHHhhcc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcE
Confidence            448899999999999997532              369999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ||+|||+++......  ........++..|+|||.+....++.++|||||||++|||++.|..||.+....+....+..+
T Consensus       476 kL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~  555 (613)
T 2ozo_A          476 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG  555 (613)
T ss_dssp             EECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTT
T ss_pred             EEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC
Confidence            999999997654322  111223345678999999988899999999999999999995599999999888888887776


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       .+...+..+++++.++|..||+.||++||+++++++.|+.++..
T Consensus       556 -~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~  599 (613)
T 2ozo_A          556 -KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  599 (613)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             -CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence             45566778999999999999999999999999999999987644

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-36  Score=242.84  Aligned_cols=203  Identities=28%  Similarity=0.464  Sum_probs=158.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCC--------CCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKS--------GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNC   88 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~ni   88 (223)
                      ..+||||+++|+|.+++...+.......        .........+++..++.++.||+.||.|||+.|++|+||||.||
T Consensus       124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NI  203 (344)
T 1rjb_A          124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV  203 (344)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGE
T ss_pred             cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhE
Confidence            4488999999999999987543110000        00001123589999999999999999999999999999999999


Q ss_pred             eeecCCCeEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy15108         89 LISSDLSVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV  167 (223)
Q Consensus        89 l~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~  167 (223)
                      +++.++.++++|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|++.|..||.+......
T Consensus       204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  283 (344)
T 1rjb_A          204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  283 (344)
T ss_dssp             EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH
Confidence            999999999999999875543321 1123345567899999998888999999999999999999449999988776555


Q ss_pred             HHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      .............+..+++++.+++.+||+.||.+||++.+++++|+.++..
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          284 FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            5555554456666777899999999999999999999999999999998754

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=3.2e-36  Score=239.47  Aligned_cols=176  Identities=16%  Similarity=0.254  Sum_probs=153.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||++|++||||||.||+++.++.++
T Consensus        81 ~lv~E~~~gg~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vk  145 (337)
T 1o6l_A           81 CFVMEYANGGELFFHLSRER---------------VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK  145 (337)
T ss_dssp             EEEEECCTTCBHHHHHHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             EEEEeCCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEE
Confidence            38899999999999998754               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      |+|||++....... .......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||.+.+.......+......
T Consensus       146 L~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~~~~~~~~i~~~~~~  223 (337)
T 1o6l_A          146 ITDFGLCKEGISDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGRLPFYNQDHERLFELILMEEIR  223 (337)
T ss_dssp             ECCCTTCBCSCCTT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred             EeeccchhhcccCC-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHh-cCCCCCCCCCHHHHHHHHHcCCCC
Confidence            99999987533221 1223456789999999999888999999999999999999 799999998888888777765433


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                        .+..+++++.+++.+||+.||.+||     +++++++|
T Consensus       224 --~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          224 --FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             --CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             --CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence              3567899999999999999999999     89999876

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=2.4e-36  Score=235.64  Aligned_cols=188  Identities=25%  Similarity=0.418  Sum_probs=159.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.++++..+               .+++..++.++.|+++||.|||+.|++|+||+|.||+++.++.+
T Consensus        92 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~  156 (291)
T 1xbb_A           92 WMLVMEMAELGPLNKYLQQNR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA  156 (291)
T ss_dssp             EEEEEECCTTEEHHHHHHHCT---------------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE
T ss_pred             cEEEEEeCCCCCHHHHHHhCc---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcE
Confidence            348899999999999998753               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh--hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++........  .......++..|+|||.+.+..++.++|+||||+++|+|++.|..||......+....+...
T Consensus       157 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~  236 (291)
T 1xbb_A          157 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG  236 (291)
T ss_dssp             EECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred             EEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            9999999875533221  11122345678999999988888999999999999999994499999998888877777665


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                       .....+..+++++.+++.+||+.||.+||++.++++.|++++.+.
T Consensus       237 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  281 (291)
T 1xbb_A          237 -ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  281 (291)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence             345556788999999999999999999999999999999988764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=2.1e-36  Score=236.43  Aligned_cols=185  Identities=17%  Similarity=0.177  Sum_probs=152.1

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC---
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS---   95 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~---   95 (223)
                      +|+||+ +++|.++++..+.              ++++..+..++.|+++||.|||+.|++||||||+||+++.++.   
T Consensus        83 lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~  147 (298)
T 1csn_A           83 LVIDLL-GPSLEDLLDLCGR--------------KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNA  147 (298)
T ss_dssp             EEEECC-CCBHHHHHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTT
T ss_pred             EEEEec-CCCHHHHHHHhcc--------------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCC
Confidence            788999 9999999986533              5999999999999999999999999999999999999987765   


Q ss_pred             --eEEcCCCCCcccchhhh------hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---H
Q psy15108         96 --VKISLSGLSKDTYQKEY------YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS---D  164 (223)
Q Consensus        96 --~~l~df~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~---~  164 (223)
                        ++++|||++........      .......++..|+|||.+.+..++.++||||||+++|+|+ +|..||.+..   .
T Consensus       148 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~~~~  226 (298)
T 1csn_A          148 NMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL-RGSLPWQGLKAATN  226 (298)
T ss_dssp             TCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTSSCCSCCH
T ss_pred             CeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHH-cCCCCcchhhcccc
Confidence              99999999976543321      1223456889999999998888999999999999999999 7999998743   3


Q ss_pred             HHHHHHHHhCcccC---CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        165 DQVLSQLESKKLCW---KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       165 ~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ......+.......   .....+++++.+++..||+.||.+||+++++++.|++++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          227 KQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             HHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence            34444433322211   12346789999999999999999999999999999998754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=2.4e-36  Score=235.30  Aligned_cols=191  Identities=27%  Similarity=0.415  Sum_probs=160.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++.....              .+++..+..++.|+++||.|||+.|++|+||+|.||+++.++.+
T Consensus        95 ~~~v~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~  160 (291)
T 1u46_A           95 MKMVTELAPLGSLLDRLRKHQG--------------HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLV  160 (291)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGG--------------GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEE
T ss_pred             ceeeEecccCCCHHHHHHhccC--------------CcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCE
Confidence            4478999999999999987643              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++.......  ........++..|+|||.+....++.++|+||||+++++|++.|..||......+....+...
T Consensus       161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~  240 (291)
T 1u46_A          161 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE  240 (291)
T ss_dssp             EECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS
T ss_pred             EEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc
Confidence            999999987653322  111223455678999999988888999999999999999994499999999988888888776


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhcc
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDV  221 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~  221 (223)
                      ....+.+..++.++.+++.+||+.||.+||++.++++.|+++...+.
T Consensus       241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  287 (291)
T 1u46_A          241 GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM  287 (291)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred             CCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence            56666677889999999999999999999999999999999877654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=2.7e-36  Score=237.43  Aligned_cols=202  Identities=29%  Similarity=0.572  Sum_probs=162.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhcccc---------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKD---------KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN   87 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~---------~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~n   87 (223)
                      ..+|+||+.+|+|.+++...+.....         ...........+++..++.++.|+++||.|||+.|++|+||||.|
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N  180 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN  180 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchhe
Confidence            44889999999999999876431000         000001122458999999999999999999999999999999999


Q ss_pred             eeeecCCCeEEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy15108         88 CLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ  166 (223)
Q Consensus        88 il~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~  166 (223)
                      |+++.++.++++|||++....... ........++..|+|||.+.+..++.++||||+|+++|+|++.|..||.+.....
T Consensus       181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  260 (314)
T 2ivs_A          181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER  260 (314)
T ss_dssp             EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999987553322 1122334556789999999888889999999999999999944999999888877


Q ss_pred             HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ....+... .....+..+++++.+++.+||+.||.+||++.+++++|++++.+
T Consensus       261 ~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          261 LFNLLKTG-HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHhhcC-CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            77766665 44555678899999999999999999999999999999998764

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.3e-36  Score=236.53  Aligned_cols=189  Identities=29%  Similarity=0.478  Sum_probs=162.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.++++..+.             ..+++..++.++.|++.||.|||+.|++|+||+|.||+++.++.+
T Consensus        84 ~~~v~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~  150 (288)
T 3kfa_A           84 FYIITEFMTYGNLLDYLRECNR-------------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV  150 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHCCT-------------TTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCE
T ss_pred             EEEEEEcCCCCcHHHHHHhccc-------------CCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCE
Confidence            3478999999999999987543             469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............++..|+|||.+.+..++.++|+||+|+++|+|++.|..||...+.......+... .
T Consensus       151 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~-~  229 (288)
T 3kfa_A          151 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-Y  229 (288)
T ss_dssp             EECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-C
T ss_pred             EEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc-C
Confidence            999999987654333222333455678999999988889999999999999999994499999988887777766655 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ....+..+++.+.+++.+||+.||.+||+++++++.|+.++.+
T Consensus       230 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence            5566778899999999999999999999999999999988764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=3.4e-36  Score=235.21  Aligned_cols=186  Identities=18%  Similarity=0.273  Sum_probs=151.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.+++...+               ++++..++.++.|+++||.|||+.|++||||||.||+++.++.++
T Consensus        87 ~lv~e~~~g~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~k  151 (294)
T 4eqm_A           87 YLVMEYIEGPTLSEYIESHG---------------PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLK  151 (294)
T ss_dssp             EEEEECCCSCBHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             EEEEeCCCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence            38899999999999998764               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++...............+++.|+|||.+.+..++.++|+||+|+++|+|+ +|..||.+................
T Consensus       152 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll-~g~~pf~~~~~~~~~~~~~~~~~~  230 (294)
T 4eqm_A          152 IFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML-VGEPPFNGETAVSIAIKHIQDSVP  230 (294)
T ss_dssp             ECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHH-HSSCSSCSSCHHHHHHHHHSSCCC
T ss_pred             EEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHhhccCC
Confidence            9999999765444333334456889999999998888999999999999999999 699999988876655444333221


Q ss_pred             ---CCCCCCChHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHhhh
Q psy15108        178 ---WKHSSKTPEYITSLHEKCIHPHPHQRP-TFPSIVTQLSDAMCN  219 (223)
Q Consensus       178 ---~~~~~~~~~~~~~li~~~l~~dp~~Rp-s~~~ll~~L~~~~~~  219 (223)
                         ......+++.+.+++.+||+.||.+|| +++++.+.|+.++.+
T Consensus       231 ~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          231 NVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             CcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence               123456889999999999999999998 899999999887654

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=8.5e-36  Score=234.68  Aligned_cols=192  Identities=28%  Similarity=0.532  Sum_probs=155.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++++|+.+|+|.+++......         .....+++..++.++.|+++||.|||+.|++|+||||.||+++.++.++
T Consensus       117 ~~v~e~~~~~~L~~~l~~~~~~---------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~k  187 (313)
T 3brb_A          117 MVILPFMKYGDLHTYLLYSRLE---------TGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVC  187 (313)
T ss_dssp             EEEEECCTTCBHHHHHHHTTBT---------TSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEE
T ss_pred             EEEEecccCCCHHHHHHHhhhh---------cCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEE
Confidence            4789999999999999764320         1234699999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++........ .......++..|+|||.+.+..++.++|+||||+++|+|++.|..||...........+... .
T Consensus       188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~  266 (313)
T 3brb_A          188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG-H  266 (313)
T ss_dssp             ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-C
T ss_pred             EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC-C
Confidence            999999876543321 12233456778999999988889999999999999999994489999988887777776665 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ....+..+++++.+++.+||+.||.+||++++++++|++++..
T Consensus       267 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          267 RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            4555677899999999999999999999999999999998753

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.2e-36  Score=243.43  Aligned_cols=176  Identities=17%  Similarity=0.224  Sum_probs=150.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.++++..+.               +++..+..++.||+.||.|||++|++||||||+||+++.++.++
T Consensus       100 ~lv~E~~~gg~L~~~l~~~~~---------------~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ik  164 (353)
T 3txo_A          100 FFVMEFVNGGDLMFHIQKSRR---------------FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCK  164 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHHSS---------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             EEEEeCCCCCcHHHHHHHcCC---------------CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEE
Confidence            388999999999999987644               99999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      |+|||++....... .......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||.+.+..+....+......
T Consensus       165 L~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~G~~Pf~~~~~~~~~~~i~~~~~~  242 (353)
T 3txo_A          165 LADFGMCKEGICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML-CGHAPFEAENEDDLFEAILNDEVV  242 (353)
T ss_dssp             ECCCTTCBCSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred             EccccceeecccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHH-hCCCCCCCCCHHHHHHHHHcCCCC
Confidence            99999987533222 1234457899999999998888999999999999999999 799999999998888888776443


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTF------PSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~------~~ll~~  212 (223)
                        .+..+++.+.+++.+||+.||.+||++      +++++|
T Consensus       243 --~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h  281 (353)
T 3txo_A          243 --YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH  281 (353)
T ss_dssp             --CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred             --CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence              356688999999999999999999998      777764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=2e-37  Score=244.09  Aligned_cols=203  Identities=29%  Similarity=0.505  Sum_probs=158.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSG-SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~-~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+++||+.+|+|.+++............ ........+++..++.++.|+++||.|||+.|++|+||||.||+++.++.
T Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~  186 (316)
T 2xir_A          107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV  186 (316)
T ss_dssp             CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCC
Confidence            45789999999999999865431110000 00001123899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHh
Q psy15108         96 VKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ-VLSQLES  173 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~-~~~~~~~  173 (223)
                      ++++|||++....... ........++..|+|||.+.+..++.++||||+|+++|+|++.|..||.+..... ....+..
T Consensus       187 ~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~  266 (316)
T 2xir_A          187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE  266 (316)
T ss_dssp             EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH
T ss_pred             EEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhcc
Confidence            9999999987543322 1122334557789999999888899999999999999999944999998776443 3333433


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      . .....+..+++++.+++..||+.||.+||++.+++++|+.++...
T Consensus       267 ~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          267 G-TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             T-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             C-ccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            3 444556678899999999999999999999999999999998764

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=7.8e-36  Score=235.73  Aligned_cols=197  Identities=30%  Similarity=0.577  Sum_probs=162.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..+......     .....+++..++.++.|++.||.|||+.|++||||||.||+++.++.+
T Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~-----~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~  177 (322)
T 1p4o_A          103 TLVIMELMTRGDLKSYLRSLRPAMANN-----PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  177 (322)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHC-----TTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred             cEEEEEeCCCCcHHHHHHHhchhhccC-----CCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeE
Confidence            447899999999999998764311000     011357999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++........ .......++..|+|||.+.+..++.++||||+|+++|+|++.|..||.+.........+....
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  257 (322)
T 1p4o_A          178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG  257 (322)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC
T ss_pred             EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCC
Confidence            9999999876543321 122334557789999999888899999999999999999955899999988888777776653


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       ....+..++..+.+++.+||+.||.+||++.+++++|++.+.+
T Consensus       258 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~  300 (322)
T 1p4o_A          258 -LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP  300 (322)
T ss_dssp             -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred             -cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence             3445667899999999999999999999999999999887653

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.1e-36  Score=244.68  Aligned_cols=186  Identities=16%  Similarity=0.141  Sum_probs=149.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee--cCCC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS--SDLS   95 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~--~~~~   95 (223)
                      .+||||+ +|+|.++++..+.              .+++..++.++.||+.||.|||+.|++||||||.||+++  .++.
T Consensus       128 ~lv~e~~-g~~L~~~~~~~~~--------------~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~  192 (364)
T 3op5_A          128 FMIMDRF-GSDLQKIYEANAK--------------RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ  192 (364)
T ss_dssp             EEEEECE-EEEHHHHHHHTTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTC
T ss_pred             EEEEeCC-CCCHHHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCe
Confidence            4789999 9999999987533              599999999999999999999999999999999999999  8899


Q ss_pred             eEEcCCCCCcccchhhhh------hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHH
Q psy15108         96 VKISLSGLSKDTYQKEYY------KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVL  168 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~  168 (223)
                      ++|+|||+++........      ......+++.|+|||.+.+..++.++|||||||++|+|+ +|..||.+.... ...
T Consensus       193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~-~g~~Pf~~~~~~~~~~  271 (364)
T 3op5_A          193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWL-TGHLPWEDNLKDPKYV  271 (364)
T ss_dssp             EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSCCTTGGGTTCHHHH
T ss_pred             EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHH-hCCCCccccccCHHHH
Confidence            999999999765433211      112345889999999999888999999999999999999 699999854322 211


Q ss_pred             HHHHh----Cc----ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        169 SQLES----KK----LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       169 ~~~~~----~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      .....    ..    ........+++++.+++..||+.+|.+||+++++++.|++++.+
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~  330 (364)
T 3op5_A          272 RDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA  330 (364)
T ss_dssp             HHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            11111    00    00111256789999999999999999999999999999998754

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=6.2e-36  Score=256.28  Aligned_cols=188  Identities=31%  Similarity=0.515  Sum_probs=160.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..+.              .+++..++.++.|+++||.|||+.|++||||||+||+++.++.+
T Consensus       465 ~~lv~E~~~~g~L~~~l~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~v  530 (656)
T 2j0j_A          465 VWIIMELCTLGELRSFLQVRKF--------------SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV  530 (656)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTT--------------TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEE
T ss_pred             eEEEEEcCCCCcHHHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCE
Confidence            4488999999999999986543              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++...............+++.|+|||.+....++.++||||||+++|+|++.|..||.+....+....+... .
T Consensus       531 kL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~-~  609 (656)
T 2j0j_A          531 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-E  609 (656)
T ss_dssp             EECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHT-C
T ss_pred             EEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999998654443333334456678999999988889999999999999999996699999999888888777766 3


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ..+.+..+++.+.+++.+||+.||.+||++.++++.|++++++
T Consensus       610 ~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          610 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            4556678899999999999999999999999999999998765

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=5.7e-36  Score=230.72  Aligned_cols=182  Identities=22%  Similarity=0.353  Sum_probs=157.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCCCCCeeeecCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~~~nil~~~~~   94 (223)
                      ..+|+||+++|+|.++++..+.             ..+++..++.++.|+++||.|||+.+  ++|+||||+||+++.++
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~  150 (271)
T 3kmu_A           84 PTLITHWMPYGSLYNVLHEGTN-------------FVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDM  150 (271)
T ss_dssp             CEEEEECCTTCBHHHHHHSCSS-------------CCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTS
T ss_pred             eEeeecccCCCcHHHHHhhccc-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCc
Confidence            4588999999999999986432             35899999999999999999999999  99999999999999999


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCc---ccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFST---KSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~---~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      .+++.||+++....      .....+++.|+|||.+.+..++.   ++||||+|+++|+++ +|..||...........+
T Consensus       151 ~~~l~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~~~~~~~~  223 (271)
T 3kmu_A          151 TARISMADVKFSFQ------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV-TREVPFADLSNMEIGMKV  223 (271)
T ss_dssp             CEEEEGGGSCCTTS------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHH-HCSCTTTTSCHHHHHHHH
T ss_pred             ceeEEeccceeeec------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHH-hCCCCccccChHHHHHHH
Confidence            99998888765422      23356788999999987665444   799999999999999 699999998888877777


Q ss_pred             HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      ......+..+..+++++.+++.+||+.||++|||++++++.|+++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          224 ALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            76666677778899999999999999999999999999999998764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.3e-36  Score=235.29  Aligned_cols=188  Identities=24%  Similarity=0.422  Sum_probs=160.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++...+              ..+++..++.++.|+++||.|||+.|++|+||+|.||+++.++.+
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~  149 (287)
T 1u59_A           84 LMLVMEMAGGGPLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYA  149 (287)
T ss_dssp             EEEEEECCTTEEHHHHHTTCT--------------TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEE
T ss_pred             cEEEEEeCCCCCHHHHHHhCC--------------ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCE
Confidence            347899999999999997432              359999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh--hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||++........  .......++..|+|||.+.+..++.++|+||+|+++|+|++.|..||......+....+...
T Consensus       150 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~  229 (287)
T 1u59_A          150 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG  229 (287)
T ss_dssp             EECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT
T ss_pred             EECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcC
Confidence            9999999876533221  11223345788999999988888999999999999999994499999988887777777665


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       .....+..+++++.+++..||+.||.+||++.+++++|+.++.+
T Consensus       230 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  273 (287)
T 1u59_A          230 -KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  273 (287)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence             34555678899999999999999999999999999999998764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=9.5e-36  Score=244.59  Aligned_cols=179  Identities=17%  Similarity=0.221  Sum_probs=155.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec---C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---D   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~---~   93 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.||++||.|||++|++||||||+||+++.   +
T Consensus        85 ~~lv~E~~~gg~L~~~i~~~~---------------~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~  149 (444)
T 3soa_A           85 HYLIFDLVTGGELFEDIVARE---------------YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKG  149 (444)
T ss_dssp             EEEEECCCBCCBHHHHHHHCS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTT
T ss_pred             EEEEEEeCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCC
Confidence            348899999999999998754               4999999999999999999999999999999999999984   5


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +.++++|||++....... .......+++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.+.......+..
T Consensus       150 ~~vkL~DFG~a~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell-~G~~Pf~~~~~~~~~~~i~~  227 (444)
T 3soa_A          150 AAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL-VGYPPFWDEDQHRLYQQIKA  227 (444)
T ss_dssp             CCEEECCCSSCBCCCTTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHH
T ss_pred             CcEEEccCceeEEecCCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHH-hCCCCCCCccHHHHHHHHHh
Confidence            789999999997554322 1123457889999999998888999999999999999999 79999999998888888877


Q ss_pred             CcccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +....+.+  ..+++++++++.+||+.||.+||++.++++|
T Consensus       228 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          228 GAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             TCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            65544333  4678999999999999999999999999875

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.6e-36  Score=236.22  Aligned_cols=178  Identities=17%  Similarity=0.281  Sum_probs=151.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..                .+++..+..++.|++.||.|||+.|++||||||.||+++.++.+
T Consensus        92 ~~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~  155 (297)
T 3fxz_A           92 LWVVMEYLAGGSLTDVVTET----------------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV  155 (297)
T ss_dssp             EEEEEECCTTCBHHHHHHHS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCE
T ss_pred             EEEEEECCCCCCHHHHHhhc----------------CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCE
Confidence            34889999999999999753                48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-Cc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES-KK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~-~~  175 (223)
                      +++|||++....... .......+++.|+|||.+.+..++.++||||+|+++|+|+ +|..||.+.+.......+.. ..
T Consensus       156 kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~~~~~~~~~~  233 (297)
T 3fxz_A          156 KLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI-EGEPPYLNENPLRALYLIATNGT  233 (297)
T ss_dssp             EECCCTTCEECCSTT-CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCHHHHHHHHHHHCS
T ss_pred             EEeeCCCceecCCcc-cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCC
Confidence            999999987544322 1233457889999999999889999999999999999999 79999998887665555443 32


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+..+++.+.+++.+||+.||.+||++++++++
T Consensus       234 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          234 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            3344456788999999999999999999999999875

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=2.4e-36  Score=242.23  Aligned_cols=178  Identities=17%  Similarity=0.265  Sum_probs=153.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC--
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL--   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~--   94 (223)
                      ..+||||+.+|+|.+++...               ..+++..+..++.||+.||.|||+.|++||||||.||+++.++  
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~  154 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQK---------------ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP  154 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTC---------------SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSS
T ss_pred             EEEEEEcCCCCcHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCC
Confidence            34889999999999999653               3599999999999999999999999999999999999998776  


Q ss_pred             --CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         95 --SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        95 --~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                        .++++|||++.......  ......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||.+.+..+....+.
T Consensus       155 ~~~vkl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll-~g~~Pf~~~~~~~~~~~i~  231 (361)
T 2yab_A          155 IPHIKLIDFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL-SGASPFLGDTKQETLANIT  231 (361)
T ss_dssp             SCCEEECCCSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSCCSSCCSSHHHHHHHHH
T ss_pred             ccCEEEEecCCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHH
Confidence              79999999997654322  224457899999999998888999999999999999999 7999999998888888877


Q ss_pred             hCcccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ........  ....++++++++.+||..||.+|||+.++++|
T Consensus       232 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          232 AVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             TTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            65443321  24678899999999999999999999999864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=5.5e-36  Score=239.47  Aligned_cols=175  Identities=18%  Similarity=0.282  Sum_probs=152.8

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +||||+.+|+|.++++..+               .+++..++.++.||+.||.|||+.|++||||||.||+++.++.++|
T Consensus        98 lv~E~~~gg~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL  162 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQVG---------------RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKI  162 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             EEEeCCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEE
Confidence            7899999999999998764               4999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW  178 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~  178 (223)
                      +|||++....... .......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||.+.+..+....+...... 
T Consensus       163 ~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~G~~Pf~~~~~~~~~~~i~~~~~~-  239 (353)
T 2i0e_A          163 ADFGMCKENIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML-AGQAPFEGEDEDELFQSIMEHNVA-  239 (353)
T ss_dssp             CCCTTCBCCCCTT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHCCCC-
T ss_pred             EeCCcccccccCC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHH-cCCCCCCCCCHHHHHHHHHhCCCC-
Confidence            9999987532221 1234457899999999999888999999999999999999 799999999988888888776443 


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        179 KHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       179 ~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                       .+..++.++.+++.+||+.||.+||+     ++++++|
T Consensus       240 -~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          240 -YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             -CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             -CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence             45678999999999999999999995     5777765

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1e-35  Score=234.85  Aligned_cols=173  Identities=20%  Similarity=0.232  Sum_probs=153.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.++++..+               .+++..+..++.||+.||.|||+.|++||||||+||+++.++.++
T Consensus        82 ~lv~e~~~gg~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~k  146 (318)
T 1fot_A           82 FMIMDYIEGGELFSLLRKSQ---------------RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIK  146 (318)
T ss_dssp             EEEECCCCSCBHHHHHHHTS---------------SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEE
T ss_pred             EEEEeCCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEE
Confidence            38899999999999998653               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++......    .....+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||.+.+.......+..... 
T Consensus       147 L~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~-  220 (318)
T 1fot_A          147 ITDFGFAKYVPDV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML-AGYTPFYDSNTMKTYEKILNAEL-  220 (318)
T ss_dssp             ECCCSSCEECSSC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHHHHCCC-
T ss_pred             EeecCcceecCCc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCC-
Confidence            9999999754322    23457889999999999888999999999999999999 79999999888888888777643 


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                       ..+...++++.+++.+||+.||.+||     +++++++|
T Consensus       221 -~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          221 -RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             -CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             -CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence             33567889999999999999999999     88998865

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=2.1e-36  Score=240.08  Aligned_cols=202  Identities=29%  Similarity=0.464  Sum_probs=159.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+....... ........+++..++.++.|++.||.|||+.|++|+||||.||+++.++.+
T Consensus       125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~  203 (333)
T 2i1m_A          125 VLVITEYCCYGDLLNFLRRKSRVLETDP-AFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA  203 (333)
T ss_dssp             CEEEEECCTTEEHHHHHHHHHHHHSCC--------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEE
T ss_pred             eEEEEecCCCCcHHHHHHHhcccccccc-cccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeE
Confidence            4478999999999999987653111100 000012468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... ........++..|+|||.+.+..++.++||||||+++|+|++.|..||.+.........+....
T Consensus       204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~  283 (333)
T 2i1m_A          204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG  283 (333)
T ss_dssp             EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHT
T ss_pred             EECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcC
Confidence            999999987543322 1112334456789999999888899999999999999999955999998876655554444443


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      .....+..+++.+.+++..||+.||.+||++.+++++|+++..+
T Consensus       284 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          284 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence            55555677899999999999999999999999999999987654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.6e-36  Score=240.65  Aligned_cols=177  Identities=18%  Similarity=0.257  Sum_probs=153.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||++|++||||||+||+++.++.+
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~v  157 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSCH---------------KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHI  157 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCE
T ss_pred             EEEEEeCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCE
Confidence            338899999999999998754               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||.+.+..+....+.....
T Consensus       158 kL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~~~~~~~~i~~~~~  235 (345)
T 1xjd_A          158 KIADFGMCKENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML-IGQSPFHGQDEEELFHSIRMDNP  235 (345)
T ss_dssp             EECCCTTCBCCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             EEeEChhhhhcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHhCCC
Confidence            999999987532221 1234567889999999999888999999999999999999 79999999998888888776643


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHH-HHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFP-SIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~-~ll~~  212 (223)
                        ..+..+++++.+++.+||+.||.+||++. ++++|
T Consensus       236 --~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h  270 (345)
T 1xjd_A          236 --FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH  270 (345)
T ss_dssp             --CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             --CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence              33566889999999999999999999997 77643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=5.5e-36  Score=237.26  Aligned_cols=200  Identities=27%  Similarity=0.454  Sum_probs=159.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~-~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .+||||+++|+|.+++...+....+.. .........+++..++.++.|+++||.|||+.|++|+||||.||+++.++.+
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCE
T ss_pred             EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeE
Confidence            378999999999999986541000000 0000012469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++.......  ......++..|+|||.+....++.++|+||+|+++|+|++.|..||.+....+....+... .
T Consensus       182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~-~  258 (327)
T 1fvr_A          182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-Y  258 (327)
T ss_dssp             EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT-C
T ss_pred             EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC-C
Confidence            999999986432211  1122345678999999988888999999999999999994499999998888877776655 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      ....+..+++++.+++.+||+.||.+||++++++++|.+++.+.
T Consensus       259 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          259 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            45556778999999999999999999999999999999987654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=4.8e-36  Score=234.05  Aligned_cols=186  Identities=17%  Similarity=0.200  Sum_probs=151.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeee---ecCC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDL   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~---~~~~   94 (223)
                      .+||||+ +|+|.+++.....              .+++..++.++.|++.||.|||+.|++|+||||+||++   +.++
T Consensus        81 ~lv~e~~-~~~L~~~~~~~~~--------------~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~  145 (296)
T 4hgt_A           81 VMVMELL-GPSLEDLFNFCSR--------------KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGN  145 (296)
T ss_dssp             EEEEECC-CCBHHHHHHHTTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTT
T ss_pred             EEEEEcc-CCCHHHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCC
Confidence            3788999 9999999986433              59999999999999999999999999999999999999   7888


Q ss_pred             CeEEcCCCCCcccchhhh------hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---
Q psy15108         95 SVKISLSGLSKDTYQKEY------YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD---  165 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~---  165 (223)
                      .++++|||++........      .......++..|+|||.+.+..++.++||||+|+++|+++ +|..||.+....   
T Consensus       146 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~  224 (296)
T 4hgt_A          146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN-LGSLPWQGLKAATKR  224 (296)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTSSCCCSSSS
T ss_pred             eEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHh-cCCCCCcccchhhhh
Confidence            999999999976543321      1223457789999999999888999999999999999999 799999764322   


Q ss_pred             HHHHHHHhCcccCC---CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        166 QVLSQLESKKLCWK---HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       166 ~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      .....+.......+   ....+++++.+++..||+.||++||+++++++.|++++.+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~  281 (296)
T 4hgt_A          225 QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             SHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence            22222222212111   2256789999999999999999999999999999998764

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=7.3e-36  Score=238.59  Aligned_cols=173  Identities=19%  Similarity=0.195  Sum_probs=153.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||.||+++.++.++
T Consensus       117 ~lv~e~~~gg~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~k  181 (350)
T 1rdq_E          117 YMVMEYVAGGEMFSHLRRIG---------------RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ  181 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHHC---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             EEEEcCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEE
Confidence            38899999999999998764               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      |+|||++......    .....+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||.+.+..+....+..... 
T Consensus       182 L~DFg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~~~~~~~~i~~~~~-  255 (350)
T 1rdq_E          182 VTDFGFAKRVKGR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA-AGYPPFFADQPIQIYEKIVSGKV-  255 (350)
T ss_dssp             ECCCTTCEECSSC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHCCC-
T ss_pred             EcccccceeccCC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHh-hCCCCCCCCCHHHHHHHHHcCCC-
Confidence            9999999755332    23456789999999999888999999999999999999 79999999988888888877643 


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                       ..+..++.++.+++.+||+.||.+||+     ++++++|
T Consensus       256 -~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          256 -RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             -CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             -CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence             345678999999999999999999998     8888765

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=8.7e-36  Score=236.78  Aligned_cols=202  Identities=29%  Similarity=0.534  Sum_probs=161.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~-~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+|+||+.+|+|.+++...+....... .........+++..++.++.||++||.|||+.|++|+||||.||+++.++.
T Consensus       116 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  195 (334)
T 2pvf_A          116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV  195 (334)
T ss_dssp             CEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC
T ss_pred             eEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCC
Confidence            4478999999999999986543100000 000011235899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++++|||++........ .......++..|+|||.+.+..++.++||||||+++|+|++.|..||.+....+....+...
T Consensus       196 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~  275 (334)
T 2pvf_A          196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG  275 (334)
T ss_dssp             EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT
T ss_pred             EEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcC
Confidence            99999999875543221 11223445678999999988888999999999999999994499999998888877777665


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       .....+..++.++.+++.+||+.||.+||++++++++|++++..
T Consensus       276 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~  319 (334)
T 2pvf_A          276 -HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  319 (334)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence             34555677899999999999999999999999999999998753

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=9.3e-36  Score=232.52  Aligned_cols=186  Identities=17%  Similarity=0.200  Sum_probs=151.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeee---ecCC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDL   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~---~~~~   94 (223)
                      .+|+||+ +++|.+++...+.              .+++..++.++.|++.||.|||++|++|+||||.||++   +.++
T Consensus        81 ~lv~e~~-~~~L~~~~~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~  145 (296)
T 3uzp_A           81 VMVMELL-GPSLEDLFNFCSR--------------KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGN  145 (296)
T ss_dssp             EEEEECC-CCBHHHHHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTT
T ss_pred             EEEEEec-CCCHHHHHHhhcc--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCC
Confidence            3788999 9999999985433              59999999999999999999999999999999999999   4788


Q ss_pred             CeEEcCCCCCcccchhhh------hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---H
Q psy15108         95 SVKISLSGLSKDTYQKEY------YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD---D  165 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~---~  165 (223)
                      .++++|||++........      .......++..|+|||.+.+..++.++||||||+++|+|+ +|..||.....   .
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~  224 (296)
T 3uzp_A          146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN-LGSLPWQGLKAATKR  224 (296)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTSSCCCSSSS
T ss_pred             eEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHH-hCCCCCCCcCchhhh
Confidence            999999999876543321      1123456788999999999888999999999999999999 79999976432   2


Q ss_pred             HHHHHHHhCcccCC---CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        166 QVLSQLESKKLCWK---HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       166 ~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      +....+.......+   ....+++++.+++..||+.||.+||+++++++.|++++.+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  281 (296)
T 3uzp_A          225 QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             SHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence            22233222212111   2356789999999999999999999999999999998754

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.2e-35  Score=229.16  Aligned_cols=180  Identities=29%  Similarity=0.485  Sum_probs=151.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCCCCCeeeec-
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR---LIHKDIAARNCLISS-   92 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~~~nil~~~-   92 (223)
                      ..+|+||+.+|+|.++++.                ..+++..++.++.|+++|+.|||+.|   ++|+||||+||+++. 
T Consensus        81 ~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~  144 (271)
T 3dtc_A           81 LCLVMEFARGGPLNRVLSG----------------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQK  144 (271)
T ss_dssp             CEEEEECCTTEEHHHHHTS----------------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSC
T ss_pred             eEEEEEcCCCCCHHHHhhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecc
Confidence            4488999999999999952                35899999999999999999999999   889999999999986 


Q ss_pred             -------CCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH
Q psy15108         93 -------DLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD  165 (223)
Q Consensus        93 -------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~  165 (223)
                             ++.++++|||++.......   .....++..|+|||.+.+..++.++|+||+|+++++++ +|..||.+....
T Consensus       145 ~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~~  220 (271)
T 3dtc_A          145 VENGDLSNKILKITDFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELL-TGEVPFRGIDGL  220 (271)
T ss_dssp             CSSSCCSSCCEEECCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHH-HCCCTTTTSCHH
T ss_pred             cccccccCcceEEccCCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHH
Confidence                   6779999999987544332   22346788999999998888999999999999999999 799999998888


Q ss_pred             HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                      .....+.......+.+..+++++.+++.+||+.||.+||++.+++++|+++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          221 AVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             HHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            877777776666677788999999999999999999999999999999753

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=5.1e-36  Score=243.53  Aligned_cols=179  Identities=13%  Similarity=0.224  Sum_probs=142.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec---CC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DL   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~---~~   94 (223)
                      .+||||+.+|+|.+++...+.             ..+++..+..++.||+.||.|||+.|++||||||.||+++.   ++
T Consensus       135 ~lv~E~~~gg~L~~~l~~~~~-------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~  201 (400)
T 1nxk_A          135 LIVMECLDGGELFSRIQDRGD-------------QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA  201 (400)
T ss_dssp             EEEEECCCSEEHHHHHHCC----------------CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTC
T ss_pred             EEEEEeCCCCcHHHHHHHhCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCc
Confidence            378999999999999986432             35999999999999999999999999999999999999987   68


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH----HHHH
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ----VLSQ  170 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~----~~~~  170 (223)
                      .+||+|||++.......  ......++..|+|||.+.+..++.++|||||||++|+|+ +|..||.+.....    ....
T Consensus       202 ~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~~~~~~~~  278 (400)
T 1nxk_A          202 ILKLTDFGFAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL-CGYPPFYSNHGLAISPGMKTR  278 (400)
T ss_dssp             CEEECCCTTCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHH-HSSCSCCCCTTCSSCCSHHHH
T ss_pred             cEEEEecccccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHH-hCCCCCCCCccccccHHHHHH
Confidence            89999999997554322  223456788999999998888999999999999999999 7999997654321    3334


Q ss_pred             HHhCcccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        171 LESKKLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       171 ~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +..+....+.  ...++.++.+++.+||+.||.+|||++++++|
T Consensus       279 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          279 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             HHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            4444333322  24678999999999999999999999999987

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.4e-35  Score=230.74  Aligned_cols=179  Identities=23%  Similarity=0.432  Sum_probs=150.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCCCCCeeeecCCC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLS   95 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~~~nil~~~~~~   95 (223)
                      .+||||+.+|+|.+++....              ..+++..++.++.|++.||.|||+.|  ++|+||||+||+++.++.
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~  162 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLDKA--------------HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE  162 (287)
T ss_dssp             EEEEECCTTCBHHHHHHCTT--------------SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCT
T ss_pred             eEEEEecCCCCHHHHHhccc--------------CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCC
Confidence            37899999999999997543              36999999999999999999999999  999999999999987766


Q ss_pred             -----eEEcCCCCCcccchhhhhhhhcCCcccccccccccc--cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--
Q psy15108         96 -----VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF--DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ--  166 (223)
Q Consensus        96 -----~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~--  166 (223)
                           ++++|||++......    .....++..|+|||.+.  ...++.++|+||+|+++|+|+ +|..||.......  
T Consensus       163 ~~~~~~kl~Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~-~g~~pf~~~~~~~~~  237 (287)
T 4f0f_A          163 NAPVCAKVADFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL-TGEGPFDEYSYGKIK  237 (287)
T ss_dssp             TCSCCEEECCCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHH-HSSCTTTTCCCCHHH
T ss_pred             CCceeEEeCCCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHH-cCCCCCccccccHHH
Confidence                 999999998754332    23456788999999984  344688999999999999999 7999998665433  


Q ss_pred             HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ....+.........+..+++++.+++.+||+.||.+||+++++++.|++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          238 FINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            3444555555666677889999999999999999999999999999975

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-36  Score=238.50  Aligned_cols=179  Identities=15%  Similarity=0.184  Sum_probs=153.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec--CC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS--DL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~--~~   94 (223)
                      ..+||||+.+|+|.+++...+              ..+++..+..++.|++.||.|||+.|++||||||+||+++.  ++
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~--------------~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~  141 (321)
T 1tki_A           76 LVMIFEFISGLDIFERINTSA--------------FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSS  141 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTSSS--------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCC
Confidence            348899999999999996532              35999999999999999999999999999999999999987  78


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++++|||++.......  ......+++.|+|||.+.+..++.++|+||+|+++|+|+ +|..||.+....+....+...
T Consensus       142 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~i~~~  218 (321)
T 1tki_A          142 TIKIIEFGQARQLKPGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLL-SGINPFLAETNQQIIENIMNA  218 (321)
T ss_dssp             CEEECCCTTCEECCTTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHHHHT
T ss_pred             CEEEEECCCCeECCCCC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHH-hCCCCCcCCCHHHHHHHHHcC
Confidence            89999999997654322  223456788999999998888899999999999999999 799999999888888887776


Q ss_pred             cccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......  ...++.++.+++.+||..||.+|||+.|+++|
T Consensus       219 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          219 EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            443322  24678999999999999999999999999986

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=6.6e-36  Score=232.95  Aligned_cols=187  Identities=21%  Similarity=0.430  Sum_probs=143.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|++|+.+++|.+++....              ..+++..++.++.|++.||.|||+.|++|+||||.||+++.++.+
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~  159 (289)
T 3og7_A           94 LAIVTQWCEGSSLYHHLHASE--------------TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTV  159 (289)
T ss_dssp             CEEEEECCCEEEHHHHHTTC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEE
T ss_pred             cEEEEEecCCCcHHHHHhhcc--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCE
Confidence            448899999999999996543              359999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHH
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ-VLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~-~~~~~  171 (223)
                      +++|||++....... ........++..|+|||.+.   ...++.++||||+|+++++|+ +|..||....... ....+
T Consensus       160 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~~~~~~~~~  238 (289)
T 3og7_A          160 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM-TGQLPYSNINNRDQIIEMV  238 (289)
T ss_dssp             EECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHH-HSSCTTSSCCCHHHHHHHH
T ss_pred             EEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHH-HCCCCccccchHHHHHHHh
Confidence            999999987543221 12233456789999999986   556788999999999999999 6999998765543 44444


Q ss_pred             HhCcccCC---CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        172 ESKKLCWK---HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       172 ~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      ........   ....+++++.+++.+||+.||.+||+++++++.|+++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             cccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            44322221   234678999999999999999999999999999998765

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=8.8e-36  Score=239.22  Aligned_cols=177  Identities=18%  Similarity=0.243  Sum_probs=152.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC---
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~---   94 (223)
                      .+||||+.+|+|.+++...               ..+++..+..++.||++||.|||+.|++||||||+||+++.++   
T Consensus       104 ~lv~e~~~gg~L~~~l~~~---------------~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~  168 (362)
T 2bdw_A          104 YLVFDLVTGGELFEDIVAR---------------EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA  168 (362)
T ss_dssp             EEEECCCCSCBHHHHHTTC---------------SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTC
T ss_pred             EEEEecCCCCCHHHHHHHc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCC
Confidence            4889999999999999754               3489999999999999999999999999999999999998653   


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++++|||++.......  ......+++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.+.......+..+
T Consensus       169 ~~kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll-~g~~Pf~~~~~~~~~~~i~~~  245 (362)
T 2bdw_A          169 AVKLADFGLAIEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL-VGYPPFWDEDQHRLYAQIKAG  245 (362)
T ss_dssp             CEEECCCTTCBCCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHT
T ss_pred             CEEEeecCcceEecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHhC
Confidence            59999999997654322  223457889999999998888999999999999999999 799999998888888888776


Q ss_pred             cccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+.+  ..+++++.+++.+||+.||.+||++.+++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          246 AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             CCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            5444332  3578999999999999999999999999876

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.6e-36  Score=236.47  Aligned_cols=178  Identities=16%  Similarity=0.245  Sum_probs=151.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC--
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL--   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~--   94 (223)
                      ..+||||+.+|+|.+++...               ..+++..+..++.|++.||.|||+.|++|+||||.||+++.++  
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~  153 (326)
T 2y0a_A           89 VILILELVAGGELFDFLAEK---------------ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVP  153 (326)
T ss_dssp             EEEEEECCCSCBHHHHHTTS---------------SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSS
T ss_pred             EEEEEEcCCCCCHHHHHHhc---------------CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCC
Confidence            34889999999999999653               3599999999999999999999999999999999999998877  


Q ss_pred             --CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         95 --SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        95 --~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                        .++++|||++.......  ......+++.|+|||.+.+..++.++|+||+|+++|+|+ +|..||.+....+....+.
T Consensus       154 ~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~~~  230 (326)
T 2y0a_A          154 KPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL-SGASPFLGDTKQETLANVS  230 (326)
T ss_dssp             SCCEEECCCTTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSCCSSCCSSHHHHHHHHH
T ss_pred             CCCEEEEECCCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHH-HCcCCCCCCCHHHHHHHHH
Confidence              79999999997653322  223456889999999998888999999999999999999 7999999888887777766


Q ss_pred             hCcccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ........  ....+..+.+++.+||+.||.+|||+.++++|
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             hcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            54333221  24678899999999999999999999999975

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.8e-35  Score=230.26  Aligned_cols=182  Identities=21%  Similarity=0.424  Sum_probs=148.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC-
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~-   95 (223)
                      ..+||||+.+|+|.++++..+.              .+++..++.++.|+++||.|||+++++||||||+||+++.++. 
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~  152 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNKN--------------CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDR  152 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGG--------------GCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBG
T ss_pred             CEEEEECCCCCCHHHHHHhCCC--------------CCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcc
Confidence            4488999999999999987543              4899999999999999999999999999999999999998877 


Q ss_pred             -------eEEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy15108         96 -------VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV  167 (223)
Q Consensus        96 -------~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~  167 (223)
                             ++++|||++.......     ...++..|+|||.+.+ ..++.++||||+|+++|+|++.+..||........
T Consensus       153 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~  227 (289)
T 4fvq_A          153 KTGNPPFIKLSDPGISITVLPKD-----ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK  227 (289)
T ss_dssp             GGTBCCEEEECCCCSCTTTSCHH-----HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred             cccccceeeeccCcccccccCcc-----ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH
Confidence                   9999999987554332     1234667999999877 66899999999999999999546777776666555


Q ss_pred             HHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      .......   ...+...++++.+++.+||+.||.+|||+++++++|++++.+.
T Consensus       228 ~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~  277 (289)
T 4fvq_A          228 LQFYEDR---HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD  277 (289)
T ss_dssp             HHHHHTT---CCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred             HHHhhcc---CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence            4443332   2334456778999999999999999999999999999987653

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=3.3e-35  Score=241.98  Aligned_cols=176  Identities=17%  Similarity=0.255  Sum_probs=153.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~~   96 (223)
                      .+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||+ .|++||||||.||+++.++.+
T Consensus       224 ~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~  288 (446)
T 4ejn_A          224 CFVMEYANGGELFFHLSRER---------------VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI  288 (446)
T ss_dssp             EEEECCCSSCBHHHHHHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCE
T ss_pred             EEEEeeCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCE
Confidence            37899999999999998754               49999999999999999999998 999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +|+|||++....... .......+++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.+.......+.....
T Consensus       289 kl~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~~~~~~~~i~~~~~  366 (446)
T 4ejn_A          289 KITDFGLCKEGIKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGRLPFYNQDHEKLFELILMEEI  366 (446)
T ss_dssp             EECCCCCCCTTCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             EEccCCCceeccCCC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHh-hCCCCCCCCCHHHHHHHHHhCCC
Confidence            999999987533222 1234567899999999999889999999999999999999 79999999988888887776543


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                      .  .+..+++++.+++.+||+.||.+||     +++++++|
T Consensus       367 ~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          367 R--FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             C--CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             C--CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence            3  4567889999999999999999999     99999875

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=7e-36  Score=244.72  Aligned_cols=181  Identities=15%  Similarity=0.208  Sum_probs=152.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+              ..+++..+..++.||+.||.|||+.|++||||||+||+++.++.+
T Consensus       149 ~~lV~Ey~~gg~L~~~l~~~~--------------~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~v  214 (437)
T 4aw2_A          149 LYLVMDYYVGGDLLTLLSKFE--------------DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHI  214 (437)
T ss_dssp             EEEEECCCTTCBHHHHHHTTT--------------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCE
T ss_pred             EEEEEecCCCCcHHHHHHHcc--------------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCE
Confidence            348999999999999998632              359999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      ||+|||+++..............+++.|+|||.+.     ...++.++|+||+||++|+|+ +|..||.+.+..+....+
T Consensus       215 kL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ell-tG~~Pf~~~~~~~~~~~i  293 (437)
T 4aw2_A          215 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKI  293 (437)
T ss_dssp             EECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHH
T ss_pred             EEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHH-hCCCCCCCCChhHHHHhh
Confidence            99999999765443322233457899999999986     456889999999999999999 799999999988888877


Q ss_pred             HhCcccCCCC---CCChHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q psy15108        172 ESKKLCWKHS---SKTPEYITSLHEKCIHPHPHQ--RPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~--Rps~~~ll~~  212 (223)
                      .........+   ..+++++++++.+||..+|+.  ||+++|+++|
T Consensus       294 ~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          294 MNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             HTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             hhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence            6543222222   458999999999999988887  9999999876

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=9.3e-36  Score=242.26  Aligned_cols=178  Identities=16%  Similarity=0.202  Sum_probs=153.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+++|+|.++++.                ..+++..+..++.||+.||.|||+.|++||||||.||+++.++.++
T Consensus       145 ~lV~E~~~gg~L~~~l~~----------------~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ik  208 (410)
T 3v8s_A          145 YMVMEYMPGGDLVNLMSN----------------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK  208 (410)
T ss_dssp             EEEECCCTTEEHHHHHHH----------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             EEEEeCCCCCcHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEE
Confidence            389999999999999974                2489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCC----CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE----FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~----~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      |+|||++...............+++.|+|||.+....    ++.++|+||+||++|+|+ +|..||.+.+.......+..
T Consensus       209 L~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell-~G~~Pf~~~~~~~~~~~i~~  287 (410)
T 3v8s_A          209 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML-VGDTPFYADSLVGTYSKIMN  287 (410)
T ss_dssp             ECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHHHT
T ss_pred             EeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHH-hCCCCCCCCChhhHHHHHHh
Confidence            9999999765443322334567899999999987655    778999999999999999 79999999998888888776


Q ss_pred             Ccc--cCCCCCCChHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q psy15108        174 KKL--CWKHSSKTPEYITSLHEKCIHPHPHQ--RPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~--~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~~ll~~  212 (223)
                      ...  ..+....+++++++++.+||..+|.+  ||+++|+++|
T Consensus       288 ~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          288 HKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             HHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             ccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            432  33334578999999999999998888  9999999976

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=3.3e-35  Score=237.95  Aligned_cols=177  Identities=17%  Similarity=0.250  Sum_probs=147.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||+||+++.++.+
T Consensus       128 ~~lV~E~~~gg~L~~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~i  192 (396)
T 4dc2_A          128 LFFVIEYVNGGDLMFHMQRQR---------------KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHI  192 (396)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCE
T ss_pred             EEEEEEcCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCE
Confidence            348899999999999998764               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC---------CHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL---------SDDQV  167 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~---------~~~~~  167 (223)
                      +|+|||+++...... .......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||...         .....
T Consensus       193 kL~DFGla~~~~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell-~G~~Pf~~~~~~~~~~~~~~~~~  270 (396)
T 4dc2_A          193 KLTDYGMCKEGLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM-AGRSPFDIVGSSDNPDQNTEDYL  270 (396)
T ss_dssp             EECCCTTCBCCCCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSTTTTC------CCHHHH
T ss_pred             EEeecceeeecccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHH-hCCCCCcccccccccchhhHHHH
Confidence            999999997532221 1234567899999999999999999999999999999999 799999643         22234


Q ss_pred             HHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q psy15108        168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF------PSIVTQ  212 (223)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~------~~ll~~  212 (223)
                      ...+....  ...+..++.++.+++.+||+.||.+||++      +++++|
T Consensus       271 ~~~i~~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H  319 (396)
T 4dc2_A          271 FQVILEKQ--IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  319 (396)
T ss_dssp             HHHHHHCC--CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred             HHHHhccc--cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence            44444443  34456789999999999999999999985      677654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=5.2e-36  Score=235.68  Aligned_cols=182  Identities=19%  Similarity=0.299  Sum_probs=146.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+.+|+|.++++....              .+++..+..++.|+++||.|||+.|++|+||||.||+++.++.++
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~k  148 (310)
T 3s95_A           83 NFITEYIKGGTLRGIIKSMDS--------------QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVV  148 (310)
T ss_dssp             EEEEECCTTCBHHHHHHHCCT--------------TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEE
T ss_pred             EEEEEecCCCcHHHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEE
Confidence            378999999999999987433              599999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhh-------------hhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH
Q psy15108         98 ISLSGLSKDTYQKEYYK-------------YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD  164 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~-------------~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~  164 (223)
                      ++|||++..........             .....+++.|+|||.+.+..++.++||||+|+++|+++ +|..|+.....
T Consensus       149 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~-~g~~~~~~~~~  227 (310)
T 3s95_A          149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLP  227 (310)
T ss_dssp             ECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HTCCSSTTTSC
T ss_pred             EeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHh-cCCCCCcchhh
Confidence            99999997653322111             11456889999999999989999999999999999999 68877764322


Q ss_pred             HH-----HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        165 DQ-----VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       165 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      ..     .....    .....+..+++++.+++.+||+.||++||+++++++.|+.+..
T Consensus       228 ~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          228 RTMDFGLNVRGF----LDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             BCTTSSBCHHHH----HHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHHhhhhhcc----ccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            11     01111    1122345678889999999999999999999999999988754

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2.2e-35  Score=231.10  Aligned_cols=186  Identities=20%  Similarity=0.330  Sum_probs=152.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++.....              .+++..++.++.|++.||.|||+.|++|+||||.||+++.++.+
T Consensus       100 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~  165 (302)
T 4e5w_A          100 IKLIMEFLPSGSLKEYLPKNKN--------------KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQV  165 (302)
T ss_dssp             EEEEEECCTTCBHHHHHHHHTT--------------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE
T ss_pred             EEEEEEeCCCCcHHHHHHhccc--------------cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCE
Confidence            3478999999999999976543              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh--hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC------------
Q psy15108         97 KISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL------------  162 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~------------  162 (223)
                      +++|||++........  .......++..|+|||.+.+..++.++|+||+|+++|+|+ +|..|+...            
T Consensus       166 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~  244 (302)
T 4e5w_A          166 KIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL-TYCDSDSSPMALFLKMIGPTH  244 (302)
T ss_dssp             EECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH-TTTCGGGSHHHHHHHHHCSCC
T ss_pred             EECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHH-HccCCCcchhhHHhhccCCcc
Confidence            9999999876543321  1223456677899999998888899999999999999999 677765321            


Q ss_pred             --CHH-HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        163 --SDD-QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       163 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                        ... .....+... ...+.+..+++++.+++.+||+.||.+|||++++++.|+++++
T Consensus       245 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~  302 (302)
T 4e5w_A          245 GQMTVTRLVNTLKEG-KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK  302 (302)
T ss_dssp             GGGHHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             cccCHHHHHHHHhcc-CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence              111 222223333 4555667889999999999999999999999999999998863

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=3.7e-35  Score=235.54  Aligned_cols=178  Identities=18%  Similarity=0.275  Sum_probs=139.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC-
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~-   95 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.|++.||.|||+.|++||||||.||+++.++. 
T Consensus        91 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~  155 (361)
T 3uc3_A           91 LAIIMEYASGGELYERICNAG---------------RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAP  155 (361)
T ss_dssp             EEEEEECCCSCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSC
T ss_pred             EEEEEEeCCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCc
Confidence            338899999999999998754               4999999999999999999999999999999999999987765 


Q ss_pred             -eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcc-cchHHHHHHHHHHHhCCCCCCCCCCH----HHHHH
Q psy15108         96 -VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTK-SDVYAYACLIWEIFNKGEMPFPDLSD----DQVLS  169 (223)
Q Consensus        96 -~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~Di~slG~il~~l~~~~~~p~~~~~~----~~~~~  169 (223)
                       ++++|||++.......  ......+++.|+|||.+.+..+..+ +||||+||++|+|+ +|..||.+...    .....
T Consensus       156 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~~~~~~~~~~~  232 (361)
T 3uc3_A          156 RLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVML-VGAYPFEDPEEPRDYRKTIQ  232 (361)
T ss_dssp             CEEECCCCCC-----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHH-HSSCSCC----CCCHHHHHH
T ss_pred             eEEEeecCccccccccC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHH-hCCCCCCCCccHHHHHHHHH
Confidence             9999999987432221  2234568899999999988777655 89999999999999 79999986543    34445


Q ss_pred             HHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+.......+....+++++.+++.+||+.||.+|||+.++++|
T Consensus       233 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          233 RILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             HHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            5555444555555688999999999999999999999999987

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-35  Score=241.88  Aligned_cols=180  Identities=16%  Similarity=0.192  Sum_probs=150.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+.              .+++..+..++.||+.||.|||+.|++||||||+||+++.++.+
T Consensus       136 ~~lVmE~~~gg~L~~~l~~~~~--------------~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~v  201 (412)
T 2vd5_A          136 LYLVMEYYVGGDLLTLLSKFGE--------------RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHI  201 (412)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSS--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCE
T ss_pred             EEEEEcCCCCCcHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCE
Confidence            3489999999999999987542              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc-------cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-------DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS  169 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-------~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~  169 (223)
                      ||+|||++...............+++.|+|||.+.       ...++.++|+|||||++|+|+ +|..||.+.+..+...
T Consensus       202 kL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyell-tG~~Pf~~~~~~~~~~  280 (412)
T 2vd5_A          202 RLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMF-YGQTPFYADSTAETYG  280 (412)
T ss_dssp             EECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHH
T ss_pred             EEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHH-hCCCCCCCCCHHHHHH
Confidence            99999999765433222223457899999999986       346889999999999999999 7999999998888877


Q ss_pred             HHHhCcccCC---CCCCChHHHHHHHHHhcCCCCCCC---CCHHHHHHH
Q psy15108        170 QLESKKLCWK---HSSKTPEYITSLHEKCIHPHPHQR---PTFPSIVTQ  212 (223)
Q Consensus       170 ~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~R---ps~~~ll~~  212 (223)
                      .+........   ....++++++++|.+||. +|.+|   |+++++++|
T Consensus       281 ~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          281 KIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             HHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             HHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence            7765332222   235789999999999999 99998   589998865

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=2.2e-35  Score=234.09  Aligned_cols=185  Identities=16%  Similarity=0.204  Sum_probs=150.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC--
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--   95 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~--   95 (223)
                      .+||||+ +|+|.+++...+              ..+++..++.++.|++.||.|||+.|++||||||+||+++.++.  
T Consensus        81 ~lv~e~~-~~~L~~~~~~~~--------------~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~  145 (330)
T 2izr_A           81 AMVLELL-GPSLEDLFDLCD--------------RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKT  145 (330)
T ss_dssp             EEEEECC-CCBHHHHHHHTT--------------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTC
T ss_pred             EEEEEeC-CCCHHHHHHHcC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCC
Confidence            3789999 999999998753              36999999999999999999999999999999999999998876  


Q ss_pred             ---eEEcCCCCCcccchhhhh------hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---
Q psy15108         96 ---VKISLSGLSKDTYQKEYY------KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS---  163 (223)
Q Consensus        96 ---~~l~df~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~---  163 (223)
                         ++++|||++.........      ......++..|+|||.+.+..++.++|+||||+++|+|+ +|..||.+..   
T Consensus       146 ~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell-~g~~Pf~~~~~~~  224 (330)
T 2izr_A          146 QQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFL-RGSLPWQGLKADT  224 (330)
T ss_dssp             TTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTTTCCCSS
T ss_pred             CceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHh-cCCCCcccccccc
Confidence               999999999765432211      123567889999999999988999999999999999999 7999998754   


Q ss_pred             HHHHHHHHHhCcccCC---CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        164 DDQVLSQLESKKLCWK---HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       164 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ..+....+.......+   ....+| ++.+++..||+.||.+||+++++.+.|++++.+
T Consensus       225 ~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~  282 (330)
T 2izr_A          225 LKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR  282 (330)
T ss_dssp             HHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence            3334444433222211   123456 899999999999999999999999999987654

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.9e-35  Score=233.05  Aligned_cols=193  Identities=31%  Similarity=0.565  Sum_probs=158.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec---C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---D   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~---~   93 (223)
                      ..+||||+++|+|.+++...+..        ......+++..++.++.|++.||.|||+.|++|+||+|.||+++.   .
T Consensus       108 ~~lv~e~~~~~~L~~~l~~~~~~--------~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~  179 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRETRPR--------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG  179 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHHTSCC--------SSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTT
T ss_pred             cEEEEecCCCCcHHHHHHhhccc--------ccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCc
Confidence            34889999999999999876431        112245899999999999999999999999999999999999984   4


Q ss_pred             CCeEEcCCCCCcccchhhh-hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         94 LSVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      ..++++|||++........ .......++..|+|||.+.+..++.++||||||+++|+|++.|..||...........+.
T Consensus       180 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  259 (327)
T 2yfx_A          180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT  259 (327)
T ss_dssp             CCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             ceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh
Confidence            4699999998864432221 122334567889999999888899999999999999999955999999888887777776


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      .. .....+..++..+.+++.+||+.||.+||++.+++++|..+..
T Consensus       260 ~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          260 SG-GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cC-CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            65 3445566789999999999999999999999999999988754

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=5.7e-35  Score=229.54  Aligned_cols=177  Identities=18%  Similarity=0.255  Sum_probs=147.4

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +++||+. |+|.+++.....             ..+++..+..++.|++.||.|||+.|++||||||.||+++.++.+++
T Consensus        96 lv~e~~~-~~L~~~~~~~~~-------------~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl  161 (308)
T 3g33_A           96 LVFEHVD-QDLRTYLDKAPP-------------PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL  161 (308)
T ss_dssp             EEEECCC-CBHHHHHHTCCT-------------TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEE
T ss_pred             EEehhhh-cCHHHHHhhccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEE
Confidence            6778886 699999986543             45999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc-
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC-  177 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~-  177 (223)
                      +|||++.......  ......+++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.........+...... 
T Consensus       162 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~~~~~~~i~~~~~~~  238 (308)
T 3g33_A          162 ADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKPLFCGNSEADQLGKIFDLIGLP  238 (308)
T ss_dssp             CSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTT-TSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             eeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            9999987543222  223456788999999998888999999999999999999 899999988887776665432110 


Q ss_pred             ----CC--------------------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 ----WK--------------------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ----~~--------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                          ++                    ....+++++.+++.+||+.||++|||+.++++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence                00                    013567889999999999999999999999876

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5.9e-35  Score=231.44  Aligned_cols=177  Identities=15%  Similarity=0.204  Sum_probs=149.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||.||+++.++.+
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~  160 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLEREG---------------IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHV  160 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCE
T ss_pred             EEEEEeCCCCCcHHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcE
Confidence            348899999999999998754               48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......+++.|+|||.+.+..++.++|+||+|+++|+|+ +|..||.+.+.......+.....
T Consensus       161 kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~~i~~~~~  238 (327)
T 3a62_A          161 KLTDFGLCKESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML-TGAPPFTGENRKKTIDKILKCKL  238 (327)
T ss_dssp             EECCCSCC-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHTCC
T ss_pred             EEEeCCcccccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHH-HCCCCCCCCCHHHHHHHHHhCCC
Confidence            999999987533221 1223456889999999998888999999999999999999 79999999888888777766543


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                        ..+..++.++.+++.+||+.||.+||     ++.++++|
T Consensus       239 --~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          239 --NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             --CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             --CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence              34567889999999999999999999     77888765

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=3.3e-35  Score=236.54  Aligned_cols=170  Identities=16%  Similarity=0.194  Sum_probs=149.1

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +||||+.+|+|.++++..+               .+++..+..++.||+.||.|||++|++||||||+||+++.++.++|
T Consensus       116 lv~E~~~gg~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL  180 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQRER---------------CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVL  180 (373)
T ss_dssp             EEEECCCSCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             EEEeCCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEE
Confidence            7899999999999998754               4999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW  178 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~  178 (223)
                      +|||+++...... .......+++.|+|||.+.+..++.++|+|||||++|+|+ +|..||.+.+..+....+.....  
T Consensus       181 ~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~G~~Pf~~~~~~~~~~~i~~~~~--  256 (373)
T 2r5t_A          181 TDFGLCKENIEHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML-YGLPPFYSRNTAEMYDNILNKPL--  256 (373)
T ss_dssp             CCCCBCGGGBCCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCTTCCSBHHHHHHHHHHSCC--
T ss_pred             eeCccccccccCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHH-cCCCCCCCCCHHHHHHHHHhccc--
Confidence            9999987532221 1223457889999999999889999999999999999999 79999999988888888877643  


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCCCCHH
Q psy15108        179 KHSSKTPEYITSLHEKCIHPHPHQRPTFP  207 (223)
Q Consensus       179 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~  207 (223)
                      ..+..++.++.+++.+||+.||.+||++.
T Consensus       257 ~~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          257 QLKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             CCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             CCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence            34567899999999999999999999975

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.7e-35  Score=230.25  Aligned_cols=186  Identities=17%  Similarity=0.233  Sum_probs=144.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+.+++|.++++..+               .+++..++.++.|+++||.|||+.|++|+||+|.||+++.++.++
T Consensus       110 ~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~k  174 (309)
T 2h34_A          110 YVDMRLINGVDLAAMLRRQG---------------PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAY  174 (309)
T ss_dssp             EEEEECCCCEEHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred             EEEEEecCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEE
Confidence            37899999999999998754               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++...............++..|+|||.+.+..++.++|+||||+++|+++ +|..||...........+......
T Consensus       175 l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~~~  253 (309)
T 2h34_A          175 LVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECL-TGSPPYQGDQLSVMGAHINQAIPR  253 (309)
T ss_dssp             ECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHH-HSSCSSCSCHHHHHHHHHHSCCCC
T ss_pred             EecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHH-HCCCCCCCchHHHHHHHhccCCCC
Confidence            9999998765443333334556788999999998888999999999999999999 699999887665444444433221


Q ss_pred             -CCCCCCChHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHhhh
Q psy15108        178 -WKHSSKTPEYITSLHEKCIHPHPHQRP-TFPSIVTQLSDAMCN  219 (223)
Q Consensus       178 -~~~~~~~~~~~~~li~~~l~~dp~~Rp-s~~~ll~~L~~~~~~  219 (223)
                       ...+..++.++.+++.+||+.||++|| +++++++.|++++..
T Consensus       254 ~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          254 PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence             223467889999999999999999999 999999999987654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=4e-35  Score=251.92  Aligned_cols=176  Identities=18%  Similarity=0.287  Sum_probs=155.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.++++..+.               +++..+..++.||+.||.|||+.||+||||||+|||++.++.++
T Consensus       418 ~lV~E~~~gg~L~~~l~~~~~---------------~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ik  482 (674)
T 3pfq_A          418 YFVMEYVNGGDLMYHIQQVGR---------------FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIK  482 (674)
T ss_dssp             EEEEECCCSCBHHHHHHHHSS---------------CCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEE
T ss_pred             EEEEeCcCCCcHHHHHHhcCC---------------CCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEE
Confidence            388999999999999987644               99999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      |+|||+++...... .......+++.|+|||.+.+..++.++|+|||||++|||+ +|..||.+.+..+....+..... 
T Consensus       483 L~DFGla~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyell-tG~~Pf~~~~~~~~~~~i~~~~~-  559 (674)
T 3pfq_A          483 IADFGMCKENIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML-AGQAPFEGEDEDELFQSIMEHNV-  559 (674)
T ss_dssp             ECCCTTCEECCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHSSCC-
T ss_pred             EeecceeeccccCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHH-cCCCCCCCCCHHHHHHHHHhCCC-
Confidence            99999997532221 1234567899999999999899999999999999999999 79999999999998888887654 


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTF-----PSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~ll~~  212 (223)
                       ..+..+++++.+++.+||+.||.+||++     +++++|
T Consensus       560 -~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          560 -AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             -CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred             -CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence             3456789999999999999999999997     777654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=6.1e-35  Score=232.90  Aligned_cols=176  Identities=17%  Similarity=0.256  Sum_probs=146.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.+++...+               .+++..++.++.||+.||.|||+.|++||||||+||+++.++.++
T Consensus        86 ~lv~e~~~gg~L~~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~k  150 (345)
T 3a8x_A           86 FFVIEYVNGGDLMFHMQRQR---------------KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIK  150 (345)
T ss_dssp             EEEECCCCSCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             EEEEeCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEE
Confidence            37899999999999998754               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC---------CHHHHH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL---------SDDQVL  168 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~---------~~~~~~  168 (223)
                      ++|||+++...... .......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||...         ......
T Consensus       151 L~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~~~~~~~~~~~  228 (345)
T 3a8x_A          151 LTDYGMCKEGLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM-AGRSPFDIVGSSDNPDQNTEDYLF  228 (345)
T ss_dssp             ECCGGGCBCSCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCTTTTTTC-------CHHHHH
T ss_pred             EEeccccccccCCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHH-hCCCCcCCcccccccccccHHHHH
Confidence            99999987532221 1234457889999999999888999999999999999999 799999652         233344


Q ss_pred             HHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q psy15108        169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF------PSIVTQ  212 (223)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~------~~ll~~  212 (223)
                      ..+....  ...+..++.++.+++.+||+.||.+||++      +++++|
T Consensus       229 ~~i~~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h  276 (345)
T 3a8x_A          229 QVILEKQ--IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  276 (345)
T ss_dssp             HHHHHCC--CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred             HHHHcCC--CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence            4444443  33456789999999999999999999995      677654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=8.1e-35  Score=225.58  Aligned_cols=175  Identities=20%  Similarity=0.256  Sum_probs=150.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.|++.||.|||+.|++|+||+|.||+++.++.+
T Consensus        84 ~~lv~e~~~~~~l~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~  148 (279)
T 3fdn_A           84 VYLILEYAPLGTVYRELQKLS---------------KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGEL  148 (279)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCE
T ss_pred             EEEEEecCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCE
Confidence            348899999999999998754               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++.......   .....++..|+|||.+.+..++.++|+||+|+++++|+ +|..||...........+.... 
T Consensus       149 ~l~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~-  223 (279)
T 3fdn_A          149 KIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVE-  223 (279)
T ss_dssp             EECSCCEESCC-----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHHHHTC-
T ss_pred             EEEeccccccCCccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHH-HCCCCCCCCcHHHHHHHHHhCC-
Confidence            999999886443322   23456788999999998888999999999999999999 7999999888887777766643 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       ...+...++.+.+++.+||+.||.+||+++++++|
T Consensus       224 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          224 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             -CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             -CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence             33456688999999999999999999999999987

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.6e-35  Score=233.73  Aligned_cols=188  Identities=13%  Similarity=0.153  Sum_probs=151.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC--
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL--   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~--   94 (223)
                      ..+||||+ +|+|.+++.....             ..+++..++.++.||+.||.|||+.|++||||||.||+++.++  
T Consensus       133 ~~lv~e~~-~~~L~~~l~~~~~-------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~  198 (352)
T 2jii_A          133 RFLVLPSL-GRSLQSALDVSPK-------------HVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQS  198 (352)
T ss_dssp             EEEEEECC-CEEHHHHHHHSGG-------------GCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEE
T ss_pred             EEEEecCC-CcCHHHHHHhCCc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCc
Confidence            45889999 9999999987522             4699999999999999999999999999999999999999988  


Q ss_pred             CeEEcCCCCCcccchhhhh------hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HHH
Q psy15108         95 SVKISLSGLSKDTYQKEYY------KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS--DDQ  166 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~--~~~  166 (223)
                      .++++|||++.........      ......++..|+|||.+.+..++.++||||||+++|+|+ +|..||....  ...
T Consensus       199 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~~~~~  277 (352)
T 2jii_A          199 QVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWL-YGFLPWTNCLPNTED  277 (352)
T ss_dssp             EEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSCCTTGGGTTCHHH
T ss_pred             eEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHH-hCCCCcccCCcCHHH
Confidence            8999999999765433210      112347788999999998888999999999999999999 7999998653  222


Q ss_pred             HHHHHH---hCcccCCC----CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        167 VLSQLE---SKKLCWKH----SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       167 ~~~~~~---~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ......   ........    ...+++++.+++.+||+.||.+||+++++++.|++++.+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  337 (352)
T 2jii_A          278 IMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD  337 (352)
T ss_dssp             HHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence            222221   11111110    124689999999999999999999999999999998754

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-34  Score=229.25  Aligned_cols=187  Identities=19%  Similarity=0.310  Sum_probs=146.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC--------CcccCCCCCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK--------RLIHKDIAARNC   88 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------~i~H~di~~~ni   88 (223)
                      ..+||||+.+|+|.++++..                .+++..++.++.|++.||.|||+.        |++||||||+||
T Consensus       110 ~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Ni  173 (337)
T 3mdy_A          110 LYLITDYHENGSLYDYLKST----------------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI  173 (337)
T ss_dssp             EEEEECCCTTCBHHHHHHHC----------------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGE
T ss_pred             eEEEEeccCCCcHHHHhhcc----------------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHE
Confidence            34889999999999999652                489999999999999999999998        999999999999


Q ss_pred             eeecCCCeEEcCCCCCcccchhhhh---hhhcCCcccccccccccccCCCCcc------cchHHHHHHHHHHHhCC----
Q psy15108         89 LISSDLSVKISLSGLSKDTYQKEYY---KYRNAILPLRWLPYEAVFDDEFSTK------SDVYAYACLIWEIFNKG----  155 (223)
Q Consensus        89 l~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~------~Di~slG~il~~l~~~~----  155 (223)
                      +++.++.++|+|||++.........   ......++..|+|||.+.+......      +|||||||++|+|+ +|    
T Consensus       174 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~-tg~~~~  252 (337)
T 3mdy_A          174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA-RRCVSG  252 (337)
T ss_dssp             EECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHH-TTBCBT
T ss_pred             EECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHH-hccCcc
Confidence            9999999999999999755433211   1234578899999999877666554      99999999999999 67    


Q ss_pred             ------CCCCCCCC-----HHHHHHHHHhCcccCCCC-----CCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        156 ------EMPFPDLS-----DDQVLSQLESKKLCWKHS-----SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       156 ------~~p~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                            ..||....     .......+.........+     ..+++++.+++.+||+.||.+||++.+++++|+++.++
T Consensus       253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          253 GIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             cccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence                  67775432     222222232222222222     24567899999999999999999999999999998765


Q ss_pred             c
Q psy15108        220 D  220 (223)
Q Consensus       220 ~  220 (223)
                      .
T Consensus       333 ~  333 (337)
T 3mdy_A          333 Q  333 (337)
T ss_dssp             T
T ss_pred             c
Confidence            3

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.9e-35  Score=233.79  Aligned_cols=184  Identities=17%  Similarity=0.184  Sum_probs=145.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC----------CcccCCCCCCC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK----------RLIHKDIAARN   87 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~----------~i~H~di~~~n   87 (223)
                      .+||||+++|+|.++++..                .+++..++.++.|++.||.|||+.          +++||||||+|
T Consensus        98 ~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~N  161 (322)
T 3soc_A           98 WLITAFHEKGSLSDFLKAN----------------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKN  161 (322)
T ss_dssp             EEEEECCTTCBHHHHHHHC----------------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGG
T ss_pred             EEEEecCCCCCHHHHHHhc----------------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHh
Confidence            4789999999999999752                489999999999999999999999          99999999999


Q ss_pred             eeeecCCCeEEcCCCCCcccchhhh-hhhhcCCcccccccccccccC-----CCCcccchHHHHHHHHHHHhCCCCCCCC
Q psy15108         88 CLISSDLSVKISLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFDD-----EFSTKSDVYAYACLIWEIFNKGEMPFPD  161 (223)
Q Consensus        88 il~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~-----~~~~~~Di~slG~il~~l~~~~~~p~~~  161 (223)
                      |+++.++.++|+|||++........ .......+++.|+|||.+.+.     .++.++|||||||++|+|+ +|..||.+
T Consensus       162 ill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~-tg~~pf~~  240 (322)
T 3soc_A          162 VLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA-SRCTAADG  240 (322)
T ss_dssp             EEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH-TTBTTSSS
T ss_pred             EEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHH-hCCCCCCC
Confidence            9999999999999999975543321 112335678999999998763     3556789999999999999 79888865


Q ss_pred             CC----------------HHHHHHHHHhCcccCCCCC-----CChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        162 LS----------------DDQVLSQLESKKLCWKHSS-----KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       162 ~~----------------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      ..                .......+......+..+.     ..++++.+++.+||+.||++|||++++++.|+++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          241 PVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            32                1222222322222222111     234569999999999999999999999999998764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=9.2e-35  Score=225.68  Aligned_cols=177  Identities=18%  Similarity=0.241  Sum_probs=152.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC--
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--   95 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~--   95 (223)
                      .+++||+.+|+|.+++...+               .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.  
T Consensus        81 ~~v~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~  145 (284)
T 3kk8_A           81 YLVFDLVTGGELFEDIVARE---------------FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA  145 (284)
T ss_dssp             EEEECCCCSCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTC
T ss_pred             EEEEecCCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCC
Confidence            37899999999999998764               4999999999999999999999999999999999999986655  


Q ss_pred             -eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 -VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 -~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                       ++++|||++.......  ......+++.|+|||.+.+..++.++|+||+|+++++|+ +|..||.+.........+...
T Consensus       146 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~-~g~~pf~~~~~~~~~~~~~~~  222 (284)
T 3kk8_A          146 AVKLADFGLAIEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL-VGYPPFWDEDQHRLYAQIKAG  222 (284)
T ss_dssp             CEEECCCTTCEECCSSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHT
T ss_pred             cEEEeeceeeEEcccCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHH-HCCCCCCCCchhHHHHHHHhc
Confidence             9999999986554322  223456788999999999888999999999999999999 799999998888888877766


Q ss_pred             cccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+.+  ..+++++.+++.+||+.||.+||++++++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          223 AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             CCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             cccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            5443332  4678999999999999999999999999876

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=3.2e-35  Score=236.80  Aligned_cols=179  Identities=17%  Similarity=0.193  Sum_probs=152.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee--cCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS--SDL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~--~~~   94 (223)
                      ..+||||+++|+|.+++...+.              .+++..++.++.||++||.|||+.|++||||||.||++.  ..+
T Consensus       161 ~~lv~E~~~~~~L~~~l~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~  226 (373)
T 2x4f_A          161 IVLVMEYVDGGELFDRIIDESY--------------NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAK  226 (373)
T ss_dssp             EEEEEECCTTCEEHHHHHHTGG--------------GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTT
T ss_pred             EEEEEeCCCCCcHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCC
Confidence            3488999999999999986543              589999999999999999999999999999999999984  557


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++|+|||++.......  ......+++.|+|||.+....++.++|||||||++|+|+ +|..||.+.+..+....+...
T Consensus       227 ~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-tg~~pf~~~~~~~~~~~i~~~  303 (373)
T 2x4f_A          227 QIKIIDFGLARRYKPRE--KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL-SGLSPFLGDNDAETLNNILAC  303 (373)
T ss_dssp             EEEECCCSSCEECCTTC--BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHHHHT
T ss_pred             cEEEEeCCCceecCCcc--ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhc
Confidence            89999999997654332  223456889999999998888999999999999999999 799999998888877777665


Q ss_pred             cccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......  ...+++++.+++.+||+.||.+||++.+++++
T Consensus       304 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          304 RWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             CCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            433322  24678999999999999999999999999975

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.5e-35  Score=234.67  Aligned_cols=187  Identities=27%  Similarity=0.401  Sum_probs=152.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.++++..+.              .+++..++.++.|++.||.|||+.|++|+||||.||+++.++.+
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~  166 (327)
T 3lxl_A          101 LRLVMEYLPSGCLRDFLQRHRA--------------RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV  166 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHHGG--------------GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE
T ss_pred             EEEEEeecCCCCHHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCE
Confidence            3388999999999999987543              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---------
Q psy15108         97 KISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD---------  165 (223)
Q Consensus        97 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~---------  165 (223)
                      +++|||++.......  ........++..|+|||.+.+..++.++||||+|+++++|+ +|..||......         
T Consensus       167 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll-~g~~p~~~~~~~~~~~~~~~~  245 (327)
T 3lxl_A          167 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF-TYCDKSCSPSAEFLRMMGCER  245 (327)
T ss_dssp             EECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHH-TTTCGGGSHHHHHHHHCC---
T ss_pred             EEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHH-hCCCCCccccchhhhhccccc
Confidence            999999987553322  11223345677899999998888899999999999999999 788887543321         


Q ss_pred             ------HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        166 ------QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       166 ------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                            .....+... ...+.+..+++++.+++.+||+.||.+||++++++++|+.+...
T Consensus       246 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          246 DVPALSRLLELLEEG-QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             -CCHHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred             ccccHHHHHHHhhcc-cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence                  222222233 45556778899999999999999999999999999999987654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=3.8e-35  Score=229.58  Aligned_cols=182  Identities=19%  Similarity=0.270  Sum_probs=143.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCcccCCCCCCCee
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS--------DKRLIHKDIAARNCL   89 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~i~H~di~~~nil   89 (223)
                      .+|+||+.+|+|.++++.                ..+++..++.++.|+++||.|||        +.+++||||||+||+
T Consensus        82 ~lv~e~~~~g~L~~~l~~----------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil  145 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQL----------------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL  145 (301)
T ss_dssp             EEEECCCTTCBHHHHHTT----------------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEE
T ss_pred             EEehhhccCCCHHHHHhh----------------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEE
Confidence            388999999999999953                35899999999999999999999        999999999999999


Q ss_pred             eecCCCeEEcCCCCCcccchhhhh---hhhcCCcccccccccccccC------CCCcccchHHHHHHHHHHHhCC-----
Q psy15108         90 ISSDLSVKISLSGLSKDTYQKEYY---KYRNAILPLRWLPYEAVFDD------EFSTKSDVYAYACLIWEIFNKG-----  155 (223)
Q Consensus        90 ~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~------~~~~~~Di~slG~il~~l~~~~-----  155 (223)
                      ++.++.++++|||++.........   ......+++.|+|||.+.+.      .++.++||||||+++|+|+ +|     
T Consensus       146 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~-tg~~~~~  224 (301)
T 3q4u_A          146 VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA-RRMVSNG  224 (301)
T ss_dssp             ECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH-TTBCBTT
T ss_pred             EcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHH-hhhcCcc
Confidence            999999999999998754433211   12334788999999998766      3446899999999999999 67     


Q ss_pred             -----CCCCCCCC-----HHHHHHHHHhCcccCCCC-----CCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        156 -----EMPFPDLS-----DDQVLSQLESKKLCWKHS-----SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       156 -----~~p~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                           ..||....     .......+.........+     ..+++++.+++.+||+.||++|||++++++.|+++
T Consensus       225 ~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          225 IVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             BCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence                 77885432     122222222222222222     22457899999999999999999999999999875

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=7.5e-36  Score=238.21  Aligned_cols=184  Identities=16%  Similarity=0.125  Sum_probs=146.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC--
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL--   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~--   94 (223)
                      ..+||||+ +++|.+++...+               .+++..++.++.||+.||.|||+.|++||||||+||+++.++  
T Consensus       127 ~~lv~e~~-~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~  190 (345)
T 2v62_A          127 RFMVMERL-GIDLQKISGQNG---------------TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD  190 (345)
T ss_dssp             EEEEEECE-EEEHHHHCBGGG---------------BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTT
T ss_pred             EEEEEecc-CCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCC
Confidence            34889999 999999997653               499999999999999999999999999999999999999877  


Q ss_pred             CeEEcCCCCCcccchhhh------hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC--CHHH
Q psy15108         95 SVKISLSGLSKDTYQKEY------YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL--SDDQ  166 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~--~~~~  166 (223)
                      .++|+|||+++.......      .......++..|+|||.+.+..++.++||||||+++|+|+ +|..||...  ....
T Consensus       191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell-~g~~pf~~~~~~~~~  269 (345)
T 2v62_A          191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWL-CGKLPWEQNLKDPVA  269 (345)
T ss_dssp             SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHH-HSSCTTGGGTTCHHH
T ss_pred             cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHH-hCCCCccccccccHH
Confidence            999999999976533221      1124457889999999998888999999999999999999 799999643  2222


Q ss_pred             HHHHHHhCcc-------cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        167 VLSQLESKKL-------CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       167 ~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ..........       .......+++++.+++..||+.||++||+++++++.|+++.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          270 VQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            2111111000       01112268889999999999999999999999999998753

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=2e-34  Score=226.50  Aligned_cols=184  Identities=22%  Similarity=0.352  Sum_probs=146.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCCCCCeeeecC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD---KRLIHKDIAARNCLISSD   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~~~nil~~~~   93 (223)
                      ..+||||+++|+|.++++....            ...+++..++.++.|+++||.|||+   +|++||||||+||+++.+
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~------------~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~  141 (307)
T 2eva_A           74 VCLVMEYAEGGSLYNVLHGAEP------------LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG  141 (307)
T ss_dssp             TEEEEECCTTCBHHHHHHCSSS------------EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETT
T ss_pred             cEEEEEcCCCCCHHHHHhccCC------------CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCC
Confidence            4488999999999999985432            1347899999999999999999999   899999999999999988


Q ss_pred             CC-eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH
Q psy15108         94 LS-VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD--DQVLSQ  170 (223)
Q Consensus        94 ~~-~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~--~~~~~~  170 (223)
                      +. ++++|||++......    .....++..|+|||.+.+..++.++||||||+++|+|+ +|..||.....  ......
T Consensus       142 ~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~~~~~~~~~  216 (307)
T 2eva_A          142 GTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI-TRRKPFDEIGGPAFRIMWA  216 (307)
T ss_dssp             TTEEEECCCCC----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHH-HTCCTTTTTCSSHHHHHHH
T ss_pred             CCEEEEcccccccccccc----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHH-HCCCCchhhCccHHHHHHH
Confidence            76 799999998654322    12345788999999998888999999999999999999 79999975532  233333


Q ss_pred             HHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      +... ........++..+.+++.+||+.||.+||+++++++.|+.+..
T Consensus       217 ~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          217 VHNG-TRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             HHTT-CCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred             HhcC-CCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            3333 3445566789999999999999999999999999999998764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=3e-35  Score=231.53  Aligned_cols=183  Identities=18%  Similarity=0.234  Sum_probs=144.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.++++..+               .+++..++.++.|+++||.|||+++++|+||||.||+++.++.++
T Consensus        92 ~lv~e~~~g~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~k  156 (311)
T 3ork_A           92 YIVMEYVDGVTLRDIVHTEG---------------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK  156 (311)
T ss_dssp             EEEEECCCEEEHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEE
T ss_pred             EEEEecCCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEE
Confidence            47899999999999998754               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         98 ISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        98 l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++|||++.......  ........++..|+|||.+.+..++.++||||+|+++|+|+ +|..||.+..............
T Consensus       157 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll-~g~~pf~~~~~~~~~~~~~~~~  235 (311)
T 3ork_A          157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL-TGEPPFTGDSPVSVAYQHVRED  235 (311)
T ss_dssp             ECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHCC
T ss_pred             EeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHhcCC
Confidence            99999987554322  12223456789999999998888999999999999999999 6999999888777665555442


Q ss_pred             ccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH-HHHH
Q psy15108        176 LCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ-LSDA  216 (223)
Q Consensus       176 ~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~-L~~~  216 (223)
                      ....  ....++.++.+++.+||+.||.+||+..+++.+ +.+.
T Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            2221  134578999999999999999999987666544 4443

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=7.1e-35  Score=230.41  Aligned_cols=177  Identities=20%  Similarity=0.274  Sum_probs=150.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.++++.                ..+++..+..++.|+++||.|||+.|++||||||.||+++.++.++
T Consensus       118 ~lv~e~~~~~~L~~~l~~----------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k  181 (321)
T 2c30_A          118 WVLMEFLQGGALTDIVSQ----------------VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVK  181 (321)
T ss_dssp             EEEECCCCSCBHHHHHTT----------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred             EEEEecCCCCCHHHHHHh----------------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEE
Confidence            378999999999999853                3589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++....... .......++..|+|||.+.+..++.++||||||+++|+|+ +|..||...........+......
T Consensus       182 l~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~-~g~~pf~~~~~~~~~~~~~~~~~~  259 (321)
T 2c30_A          182 LSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV-DGEPPYFSDSPVQAMKRLRDSPPP  259 (321)
T ss_dssp             ECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCHHHHHHHHHHSSCC
T ss_pred             EeeeeeeeecccCc-cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHhcCCCC
Confidence            99999987543321 1123457889999999998888999999999999999999 799999988887777766654322


Q ss_pred             -CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 -WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 -~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       ......+++++.+++.+||+.||++||++++++++
T Consensus       260 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          260 KLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             CCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             22234578899999999999999999999999876

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.3e-35  Score=229.89  Aligned_cols=178  Identities=20%  Similarity=0.258  Sum_probs=150.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++.                ...+++..+..++.|+++||.|||+.|++|+||||.||+++.++.+
T Consensus       113 ~~lv~e~~~~~~l~~~~~----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  176 (298)
T 2zv2_A          113 LYMVFELVNQGPVMEVPT----------------LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHI  176 (298)
T ss_dssp             EEEEEECCTTCBSCCSSC----------------SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCE
T ss_pred             EEEEEecCCCCcHHHHhh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCE
Confidence            347899999999987653                2469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCC---CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE---FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~---~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +++|||++........ ......+++.|+|||.+.+..   ++.++|+||+|+++|+|+ +|..||...........+..
T Consensus       177 kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~-~g~~pf~~~~~~~~~~~~~~  254 (298)
T 2zv2_A          177 KIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV-FGQCPFMDERIMCLHSKIKS  254 (298)
T ss_dssp             EECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHH
T ss_pred             EEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHH-HCCCCCCCccHHHHHHHHhc
Confidence            9999999875433221 123456889999999987655   367899999999999999 79999998888777777766


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+....+++++.+++.+||+.||++||+++++++|
T Consensus       255 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          255 QALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             CCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             ccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            655555556789999999999999999999999999865

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=6.6e-35  Score=230.52  Aligned_cols=178  Identities=18%  Similarity=0.264  Sum_probs=151.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC--
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL--   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~--   94 (223)
                      ..+|+||+.+|+|.+++...               ..+++..+..++.|++.||.|||+.|++|+||+|.||+++.++  
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~  154 (321)
T 2a2a_A           90 VVLILELVSGGELFDFLAQK---------------ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP  154 (321)
T ss_dssp             EEEEECCCCSCBHHHHHHTC---------------SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSS
T ss_pred             EEEEEEcCCCCcHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCC
Confidence            34789999999999999754               3489999999999999999999999999999999999999887  


Q ss_pred             --CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         95 --SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        95 --~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                        .++++|||++.......  ......+++.|+|||.+.+..++.++|+||+|+++|+|+ +|..||.+....+....+.
T Consensus       155 ~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~i~  231 (321)
T 2a2a_A          155 IPHIKLIDFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL-SGASPFLGDTKQETLANIT  231 (321)
T ss_dssp             SCCEEECCCTTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSCCSSCCSSHHHHHHHHH
T ss_pred             cCCEEEccCccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHH
Confidence              79999999987554322  223456788999999998888999999999999999999 7999999888888777776


Q ss_pred             hCcccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .......  .....+..+.+++.+||+.||.+||++.++++|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          232 SVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             TTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             hcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            6533222  124678899999999999999999999999875

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=7.9e-35  Score=232.65  Aligned_cols=178  Identities=17%  Similarity=0.190  Sum_probs=140.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec---C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---D   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~---~   93 (223)
                      ..+|+||+.+|+|.+++...               ..+++..+..++.|++.||.|||+.|++||||||.||+++.   +
T Consensus       123 ~~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~  187 (349)
T 2w4o_A          123 ISLVLELVTGGELFDRIVEK---------------GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPD  187 (349)
T ss_dssp             EEEEECCCCSCBHHHHHTTC---------------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTT
T ss_pred             EEEEEEeCCCCCHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCC
Confidence            34889999999999999754               34899999999999999999999999999999999999975   7


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ-VLSQLE  172 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~-~~~~~~  172 (223)
                      +.++++|||++.......  ......+++.|+|||.+.+..++.++|||||||++|+|+ +|..||....... ....+.
T Consensus       188 ~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~~~~~i~  264 (349)
T 2w4o_A          188 APLKIADFGLSKIVEHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILL-CGFEPFYDERGDQFMFRRIL  264 (349)
T ss_dssp             CCEEECCCC------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCTTCCTTCHHHHHHHHH
T ss_pred             CCEEEccCccccccCccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHH-hCCCCCCCCcccHHHHHHHH
Confidence            889999999987543322  123456788999999999888999999999999999999 7999997665543 455555


Q ss_pred             hCcccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .......  ....++.++.+++.+||+.||++||++.+++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          265 NCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             TTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             hCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            4433222  235678999999999999999999999999875

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=8.3e-35  Score=232.70  Aligned_cols=181  Identities=16%  Similarity=0.170  Sum_probs=148.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC--
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--   95 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~--   95 (223)
                      .+||||+.+|+|.+++.....           ....+++..+..++.||++||.|||++|++||||||+||+++.++.  
T Consensus       102 ~lv~e~~~g~~L~~~l~~~~~-----------~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~  170 (351)
T 3c0i_A          102 YMVFEFMDGADLCFEIVKRAD-----------AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSA  170 (351)
T ss_dssp             EEEEECCSSCBHHHHHHHHHH-----------TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTC
T ss_pred             EEEEeCCCCCCHHHHHHHhcc-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCC
Confidence            488999999999999876543           2235899999999999999999999999999999999999986654  


Q ss_pred             -eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 -VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 -~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                       ++++|||++........ ......+++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.. ......+...
T Consensus       171 ~vkl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~-~~~~~~i~~~  247 (351)
T 3c0i_A          171 PVKLGGFGVAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL-SGCLPFYGTK-ERLFEGIIKG  247 (351)
T ss_dssp             CEEECCCTTCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCSSH-HHHHHHHHHT
T ss_pred             cEEEecCcceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHH-HCCCCCCCcH-HHHHHHHHcC
Confidence             99999999976543321 123457889999999998888999999999999999999 7999998753 4455555544


Q ss_pred             cccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......  ...+++++.+++.+||+.||++||++.++++|
T Consensus       248 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          248 KYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            332211  14678899999999999999999999999875

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=3.1e-35  Score=237.79  Aligned_cols=179  Identities=18%  Similarity=0.220  Sum_probs=151.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec--CC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS--DL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~--~~   94 (223)
                      ..+||||+.+|+|.+++...+              ..+++..+..++.||+.||.|||+.|++||||||+||+++.  .+
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~  188 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAED--------------YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKAS  188 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTT--------------CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCC
T ss_pred             EEEEEEcCCCCcHHHHHHhhc--------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCC
Confidence            348899999999999997543              25999999999999999999999999999999999999974  46


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++|+|||++.......  ......+++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.+..+....+...
T Consensus       189 ~vkL~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-tg~~Pf~~~~~~~~~~~i~~~  265 (387)
T 1kob_A          189 SVKIIDFGLATKLNPDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLL-SGLSPFAGEDDLETLQNVKRC  265 (387)
T ss_dssp             CEEECCCTTCEECCTTS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHH-HSCCSSCCSSHHHHHHHHHHC
T ss_pred             ceEEEecccceecCCCc--ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHH-hCCCCCCCCCHHHHHHHHHhC
Confidence            79999999997654332  123346789999999998888999999999999999999 799999998888777777665


Q ss_pred             cccC--CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCW--KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....  .....+++++.+++.+||+.||.+||++.+++++
T Consensus       266 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          266 DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             CCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            4332  2234678999999999999999999999999875

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=9.5e-36  Score=236.60  Aligned_cols=175  Identities=18%  Similarity=0.269  Sum_probs=145.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+ +|+|.+++...+               .+++..+..++.|+++||.|||+.|++||||||+||+++.++.+
T Consensus        84 ~~lv~E~~-~g~l~~~l~~~~---------------~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~  147 (336)
T 3h4j_B           84 IVMVIEYA-GGELFDYIVEKK---------------RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNV  147 (336)
T ss_dssp             EEEEECCC-CEEHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCE
T ss_pred             EEEEEECC-CCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCE
Confidence            34788998 899999998764               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++.......  ......+++.|+|||.+.+..+ +.++||||+|+++|+|+ +|..||.+.........+... 
T Consensus       148 kl~DFG~s~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll-~g~~Pf~~~~~~~~~~~i~~~-  223 (336)
T 3h4j_B          148 KIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVML-VGRLPFDDEFIPNLFKKVNSC-  223 (336)
T ss_dssp             EECCSSCTBTTTTSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHH-HSSCSSBCSSSTTCBCCCCSS-
T ss_pred             EEEEeccceeccCCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHH-hCCCCCCCccHHHHHHHHHcC-
Confidence            999999987544332  2344568899999999987776 67899999999999999 799999876544333222222 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       ....+..+++++.+++.+||+.||.+|||++|++++
T Consensus       224 -~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          224 -VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             -CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             -CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence             233456678999999999999999999999999876

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=5.4e-35  Score=241.76  Aligned_cols=176  Identities=16%  Similarity=0.253  Sum_probs=152.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++...               +.+++..+..++.||+.||.|||+.|++||||||+||+++.++.+
T Consensus        91 ~~lv~E~~~gg~L~~~l~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~v  155 (476)
T 2y94_A           91 IFMVMEYVSGGELFDYICKN---------------GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNA  155 (476)
T ss_dssp             EEEEEECCSSEEHHHHTTSS---------------SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCE
T ss_pred             EEEEEeCCCCCcHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCe
Confidence            33889999999999999753               359999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++.......  ......+++.|+|||.+.+..+ +.++||||+||++|+|+ +|..||.+.........+..+.
T Consensus       156 kL~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell-tG~~Pf~~~~~~~~~~~i~~~~  232 (476)
T 2y94_A          156 KIADFGLSNMMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALL-CGTLPFDDDHVPTLFKKICDGI  232 (476)
T ss_dssp             EECCCSSCEECCTTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHH-HSSCSSCCSSSHHHHHHHHTTC
T ss_pred             EEEeccchhhccccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHh-hCCCCCCCCCHHHHHHHHhcCC
Confidence            999999997654322  2234578899999999987765 67899999999999999 7999999888888877777654


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .  ..+..+++++.+++.+||+.||.+|||++++++|
T Consensus       233 ~--~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          233 F--YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             C--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             c--CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence            3  3355678999999999999999999999999975

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=3.7e-34  Score=225.05  Aligned_cols=189  Identities=21%  Similarity=0.297  Sum_probs=145.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+.+|+|.+++.....           ....+++..++.++.|++.||.|||+.|++|+||+|.||+++.++.++
T Consensus       108 ~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~k  176 (310)
T 2wqm_A          108 NIVLELADAGDLSRMIKHFKK-----------QKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVK  176 (310)
T ss_dssp             EEEEECCCSCBHHHHHHHHHH-----------TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             EEEEecCCCCCHHHHHHHhcc-----------cccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEE
Confidence            378999999999999986543           234689999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHhCc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS--DDQVLSQLESKK  175 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~--~~~~~~~~~~~~  175 (223)
                      ++|||++........ ......++..|+|||.+....++.++|+||||+++|+|+ +|..||.+..  .......+....
T Consensus       177 l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~~  254 (310)
T 2wqm_A          177 LGDLGLGRFFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA-ALQSPFYGDKMNLYSLCKKIEQCD  254 (310)
T ss_dssp             ECCC-------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTC---CCHHHHHHHHHTTC
T ss_pred             EEeccceeeecCCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHH-hCCCCCcccchhHHHHHHHhhccc
Confidence            999999875433221 123346788899999998888999999999999999999 7888986543  334444555443


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ........+++++.+++.+||+.||.+||+++++++.|+++...
T Consensus       255 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          255 YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            33333456889999999999999999999999999999988654

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.1e-34  Score=230.51  Aligned_cols=184  Identities=20%  Similarity=0.234  Sum_probs=140.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC---------CcccCCCCCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK---------RLIHKDIAARNC   88 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------~i~H~di~~~ni   88 (223)
                      .+||||+++|+|.++++..                ..++..+..++.|+++||.|||+.         |++||||||.||
T Consensus        88 ~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Ni  151 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLH----------------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNV  151 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHC----------------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGE
T ss_pred             EEEEecCCCCcHHHHHhhc----------------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceE
Confidence            3889999999999999753                358999999999999999999999         999999999999


Q ss_pred             eeecCCCeEEcCCCCCcccchhh-------hhhhhcCCccccccccccccc-------CCCCcccchHHHHHHHHHHHhC
Q psy15108         89 LISSDLSVKISLSGLSKDTYQKE-------YYKYRNAILPLRWLPYEAVFD-------DEFSTKSDVYAYACLIWEIFNK  154 (223)
Q Consensus        89 l~~~~~~~~l~df~~~~~~~~~~-------~~~~~~~~~~~~~~~pe~~~~-------~~~~~~~Di~slG~il~~l~~~  154 (223)
                      +++.++.++|+|||++.......       ........++..|+|||.+.+       ..++.++|||||||++|+|+ +
T Consensus       152 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell-~  230 (336)
T 3g2f_A          152 LVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF-M  230 (336)
T ss_dssp             EECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             EEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHH-h
Confidence            99999999999999997543221       112234568899999999876       34567899999999999999 5


Q ss_pred             CCCCC-CCCC-----------------HHHHHHHHHhCcccCCCCCC------ChHHHHHHHHHhcCCCCCCCCCHHHHH
Q psy15108        155 GEMPF-PDLS-----------------DDQVLSQLESKKLCWKHSSK------TPEYITSLHEKCIHPHPHQRPTFPSIV  210 (223)
Q Consensus       155 ~~~p~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~------~~~~~~~li~~~l~~dp~~Rps~~~ll  210 (223)
                      |..|| .+..                 .......+.........+..      +++++.+++.+||+.||++|||+++++
T Consensus       231 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l  310 (336)
T 3g2f_A          231 RCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAE  310 (336)
T ss_dssp             TBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             cCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHH
Confidence            65554 2211                 11111122222222222222      345799999999999999999999999


Q ss_pred             HHHHHHhh
Q psy15108        211 TQLSDAMC  218 (223)
Q Consensus       211 ~~L~~~~~  218 (223)
                      +.|++++.
T Consensus       311 ~~L~~ll~  318 (336)
T 3g2f_A          311 ERMAELMM  318 (336)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999874

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-34  Score=228.59  Aligned_cols=181  Identities=20%  Similarity=0.280  Sum_probs=146.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++.....             ..+++..+..++.||+.||.|||+.|++|+||+|.||+++.++.+
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~  168 (326)
T 2x7f_A          102 LWLVMEFCGAGSVTDLIKNTKG-------------NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV  168 (326)
T ss_dssp             EEEEEECCTTEEHHHHHHHSGG-------------GCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCE
T ss_pred             EEEEEEcCCCCcHHHHHHhccc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCE
Confidence            4488999999999999987543             469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||++....... .......++..|+|||.+.     ...++.++|+||||+++|+|+ +|..||...........+
T Consensus       169 kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~  246 (326)
T 2x7f_A          169 KLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA-EGAPPLCDMHPMRALFLI  246 (326)
T ss_dssp             EECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHH-HSSCTTTTSCHHHHHHHH
T ss_pred             EEeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHH-hCCCCCCCCcHHHHHHHh
Confidence            999999987543221 1223456788999999986     456888999999999999999 799999888877666666


Q ss_pred             HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ............++..+.+++.+||..||.+||++++++++
T Consensus       247 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          247 PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             HHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            55544334456788999999999999999999999999875

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.5e-34  Score=230.54  Aligned_cols=177  Identities=18%  Similarity=0.298  Sum_probs=141.1

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +||| +.+|+|.+++...+               .+++..+..++.|++.||.|||+.|++||||||.||+++ ++.++|
T Consensus        86 lv~e-~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl  148 (343)
T 3dbq_A           86 MVME-CGNIDLNSWLKKKK---------------SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKL  148 (343)
T ss_dssp             EEEC-CCSEEHHHHHHHSC---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEE
T ss_pred             EEEe-CCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEE
Confidence            6778 78899999998753               499999999999999999999999999999999999997 578999


Q ss_pred             cCCCCCcccchhhh-hhhhcCCccccccccccccc-----------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-H
Q psy15108         99 SLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFD-----------DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-D  165 (223)
Q Consensus        99 ~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~-----------~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-~  165 (223)
                      +|||++........ .......+++.|+|||.+.+           ..++.++|||||||++|+|+ +|..||..... .
T Consensus       149 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~  227 (343)
T 3dbq_A          149 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT-YGKTPFQQIINQI  227 (343)
T ss_dssp             CCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHH-HSSCTTTTCCSHH
T ss_pred             eecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHH-hCCCcchhhhhHH
Confidence            99999976543321 12334578999999999864           56788999999999999999 79999987543 3


Q ss_pred             HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      .....+.........+...+.++.+++.+||+.||.+|||+.++++|-
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp  275 (343)
T 3dbq_A          228 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  275 (343)
T ss_dssp             HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             HHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence            444444444455555667788999999999999999999999998763

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=9.1e-35  Score=229.24  Aligned_cols=187  Identities=19%  Similarity=0.182  Sum_probs=150.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+++|.+++...+              ..+++..++.++.|++.||.|||+.|++|+||+|+||+++ ++.+
T Consensus       104 ~~iv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~  168 (319)
T 2y4i_B          104 LAIITSLCKGRTLYSVVRDAK--------------IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKV  168 (319)
T ss_dssp             EEEECBCCCSEEHHHHTTSSC--------------CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CC
T ss_pred             eEEEeecccCCcHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCE
Confidence            448899999999999997543              2589999999999999999999999999999999999998 6799


Q ss_pred             EEcCCCCCcccchhh----hhhhhcCCccccccccccccc---------CCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q psy15108         97 KISLSGLSKDTYQKE----YYKYRNAILPLRWLPYEAVFD---------DEFSTKSDVYAYACLIWEIFNKGEMPFPDLS  163 (223)
Q Consensus        97 ~l~df~~~~~~~~~~----~~~~~~~~~~~~~~~pe~~~~---------~~~~~~~Di~slG~il~~l~~~~~~p~~~~~  163 (223)
                      +++|||++.......    ........++..|+|||.+..         ..++.++||||||+++|+|+ +|..||....
T Consensus       169 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~  247 (319)
T 2y4i_B          169 VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH-AREWPFKTQP  247 (319)
T ss_dssp             EECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHH-HSSCSSSSCC
T ss_pred             EEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHH-hCCCCCCCCC
Confidence            999999876543211    111223457788999999864         34788999999999999999 7999999988


Q ss_pred             HHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        164 DDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      .......+............++.++.+++.+||+.||.+||+++++++.|+++.+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          248 AEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             HHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             HHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            88887777666444444446788899999999999999999999999999887654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.5e-34  Score=239.52  Aligned_cols=186  Identities=18%  Similarity=0.230  Sum_probs=152.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeee---ecCC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDL   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~---~~~~   94 (223)
                      .+||||+ +++|.++++....              .+++..++.++.||+.||.|||+.|++||||||.||++   +..+
T Consensus        79 ~lvme~~-g~sL~~ll~~~~~--------------~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~  143 (483)
T 3sv0_A           79 VLVMDLL-GPSLEDLFNFCSR--------------KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN  143 (483)
T ss_dssp             EEEEECC-CCBHHHHHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTT
T ss_pred             EEEEECC-CCCHHHHHHhhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCC
Confidence            3788998 9999999986433              59999999999999999999999999999999999999   5788


Q ss_pred             CeEEcCCCCCcccchhhh------hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---H
Q psy15108         95 SVKISLSGLSKDTYQKEY------YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD---D  165 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~---~  165 (223)
                      .++|+|||++........      .......++..|++||.+.+..++.++|||||||++|+|+ +|..||.+...   .
T Consensus       144 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~ell-tG~~Pf~~~~~~~~~  222 (483)
T 3sv0_A          144 QVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTKK  222 (483)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTSSCCCSSHH
T ss_pred             eEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHH-hCCCCCccccchhHH
Confidence            999999999976543321      1122567889999999999999999999999999999999 79999987543   3


Q ss_pred             HHHHHHHhCcccC---CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        166 QVLSQLESKKLCW---KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       166 ~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ..+..+.......   .....++.++.+++..||+.+|++||++++|++.|++++..
T Consensus       223 ~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~  279 (483)
T 3sv0_A          223 QKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR  279 (483)
T ss_dssp             HHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence            3333332221111   11256789999999999999999999999999999998753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=3.9e-34  Score=222.56  Aligned_cols=180  Identities=18%  Similarity=0.258  Sum_probs=144.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee---cCC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS---SDL   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~---~~~   94 (223)
                      .+|+||+.+|+|.+++.....           ....+++..+..++.|+++||.|||+.|++|+||||.||+++   ..+
T Consensus        96 ~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~  164 (285)
T 3is5_A           96 YIVMETCEGGELLERIVSAQA-----------RGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHS  164 (285)
T ss_dssp             EEEECCCSCCBHHHHHHHHHH-----------HTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTC
T ss_pred             EEEEEeCCCCcHHHHHHhhhh-----------cccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCC
Confidence            488999999999999976543           224699999999999999999999999999999999999994   457


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++++|||++.......  ......++..|+|||.+. ..++.++|+||+|+++++|+ +|..||.+.............
T Consensus       165 ~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll-~g~~pf~~~~~~~~~~~~~~~  240 (285)
T 3is5_A          165 PIKIIDFGLAELFKSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLL-TGCLPFTGTSLEEVQQKATYK  240 (285)
T ss_dssp             CEEECCCCCCCC------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHC
T ss_pred             CEEEEeeecceecCCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHH-hCCCCCCCCCHHHHHhhhccC
Confidence            89999999997544332  223456788999999875 56889999999999999999 799999988877776665544


Q ss_pred             cccCCC-CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKH-SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...... ....++++.+++.+||+.||.+||+++|++++
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          241 EPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             CCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             CcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            333222 24578899999999999999999999999864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=2.1e-34  Score=231.49  Aligned_cols=177  Identities=16%  Similarity=0.243  Sum_probs=150.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.+++....               .+++..+..++.||+.||.|||+.|++|+||+|.||+++.++.++
T Consensus       176 ~lv~e~~~g~~L~~~l~~~~---------------~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ik  240 (365)
T 2y7j_A          176 FLVFDLMRKGELFDYLTEKV---------------ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIR  240 (365)
T ss_dssp             EEEECCCTTCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred             EEEEEeCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence            37899999999999998653               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD------DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      ++|||++.......  ......+++.|+|||.+.+      ..++.++||||||+++|+|+ +|..||...........+
T Consensus       241 l~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell-~g~~pf~~~~~~~~~~~i  317 (365)
T 2y7j_A          241 LSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL-AGSPPFWHRRQILMLRMI  317 (365)
T ss_dssp             ECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHH
T ss_pred             EEecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHH-HCCCCCCCCCHHHHHHHH
Confidence            99999987554322  2234578899999998753      35788999999999999999 799999988887777777


Q ss_pred             HhCcccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .........  ....+..+.+++.+||+.||.+||++++++++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          318 MEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             HHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            665443322  14678889999999999999999999999875

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=3e-34  Score=225.06  Aligned_cols=177  Identities=15%  Similarity=0.203  Sum_probs=151.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeee---ecC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSD   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~---~~~   93 (223)
                      ..+|+||+.+|+|.+++...+               .+++..+..++.|++.||.|||+.|++|+||+|+||++   +.+
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~  145 (304)
T 2jam_A           81 YYLVMQLVSGGELFDRILERG---------------VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEEN  145 (304)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTT
T ss_pred             EEEEEEcCCCccHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCC
Confidence            347899999999999998754               49999999999999999999999999999999999999   677


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +.++++|||++.......   .....++..|+|||.+.+..++.++|+||+|+++|+|+ +|..||...........+..
T Consensus       146 ~~~kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~i~~  221 (304)
T 2jam_A          146 SKIMITDFGLSKMEQNGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL-CGYPPFYEETESKLFEKIKE  221 (304)
T ss_dssp             CCEEBCSCSTTCCCCCBT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHH-HSSCTTTTSCHHHHHHHHHH
T ss_pred             CCEEEccCCcceecCCCc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHc
Confidence            889999999986543221   12235678899999998888999999999999999999 79999999888888877777


Q ss_pred             CcccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+  ....+++++.+++.+||+.||.+||++++++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          222 GYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             CCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            644332  235678999999999999999999999999875

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.5e-34  Score=230.84  Aligned_cols=173  Identities=18%  Similarity=0.291  Sum_probs=148.7

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|+||+. |+|.+++...+.              .+++..+..++.|+++||.|||+.|++||||||+||+++.++.+++
T Consensus       131 lv~e~~~-g~l~~~l~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL  195 (348)
T 1u5q_A          131 LVMEYCL-GSASDLLEVHKK--------------PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL  195 (348)
T ss_dssp             EEEECCS-EEHHHHHHHHTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEE
T ss_pred             EEEecCC-CCHHHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEE
Confidence            7889997 789999876543              6999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +|||++......     ....+++.|+|||.+.   ...++.++||||||+++|+|+ +|..||.+.........+....
T Consensus       196 ~DfG~a~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell-~g~~p~~~~~~~~~~~~~~~~~  269 (348)
T 1u5q_A          196 GDFGSASIMAPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNMNAMSALYHIAQNE  269 (348)
T ss_dssp             CCCTTCBSSSSB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCHHHHHHHHHHSC
T ss_pred             eeccCceecCCC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHhcC
Confidence            999998754322     3456889999999974   456889999999999999999 7999999888777766666654


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ........+++.+.+++.+||+.||++||++++++++
T Consensus       270 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          270 SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            4444456789999999999999999999999999875

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=3.5e-34  Score=238.22  Aligned_cols=177  Identities=21%  Similarity=0.322  Sum_probs=150.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee---cC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS---SD   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~---~~   93 (223)
                      ..+|+|||.+|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||.||+++   .+
T Consensus        96 ~~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~  160 (486)
T 3mwu_A           96 FYIVGELYTGGELFDEIIKRK---------------RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKD  160 (486)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTT
T ss_pred             EEEEEEcCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCC
Confidence            347899999999999998764               499999999999999999999999999999999999995   44


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +.++++|||++.......  ......+++.|+|||.+.+ .++.++||||+||++|+|+ +|..||.+....+....+..
T Consensus       161 ~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~i~~  236 (486)
T 3mwu_A          161 CDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILL-SGTPPFYGKNEYDILKRVET  236 (486)
T ss_dssp             CCEEECSCSCTTTBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHH
T ss_pred             CCEEEEECCcCeECCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHh
Confidence            679999999987554332  2344578899999999865 5899999999999999999 79999999998888888877


Q ss_pred             CcccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .......+  ..+++++++++.+||+.||.+|||+.++++|
T Consensus       237 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          237 GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             TCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             CCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            65444332  4678999999999999999999999999986

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=4.6e-35  Score=226.85  Aligned_cols=184  Identities=16%  Similarity=0.262  Sum_probs=153.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----cccCCCCCCCeeee
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR-----LIHKDIAARNCLIS   91 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----i~H~di~~~nil~~   91 (223)
                      ..+|+||+.+|+|.+++.....           ....+++..++.++.|++.||.|||+.+     ++|+||+|+||+++
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~  150 (279)
T 2w5a_A           82 LYIVMEYCEGGDLASVITKGTK-----------ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD  150 (279)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHH-----------TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEEC
T ss_pred             EEEEEeCCCCCCHHHHHHhhcc-----------cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEc
Confidence            4488999999999999987654           2345999999999999999999999999     99999999999999


Q ss_pred             cCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         92 SDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        92 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      .++.++++|||++........ ......++..|+|||.+.+..++.++|+||||+++|+|+ +|..||...........+
T Consensus       151 ~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~i  228 (279)
T 2w5a_A          151 GKQNVKLGDFGLARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC-ALMPPFTAFSQKELAGKI  228 (279)
T ss_dssp             SSSCEEECCCCHHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHH
T ss_pred             CCCCEEEecCchheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHH-HCCCCCcccCHHHHHHHH
Confidence            999999999998865433221 112345678899999998888999999999999999999 799999988888777777


Q ss_pred             HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy15108        172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS  214 (223)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~  214 (223)
                      ..... ...+..++.++.+++.+||+.||.+||+++++++++.
T Consensus       229 ~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~  270 (279)
T 2w5a_A          229 REGKF-RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL  270 (279)
T ss_dssp             HHTCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             hhccc-ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence            76633 3445678999999999999999999999999998753

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.2e-34  Score=224.41  Aligned_cols=176  Identities=16%  Similarity=0.218  Sum_probs=150.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeee---ecCC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDL   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~---~~~~   94 (223)
                      .+|+||+.+++|.+++...+               .+++..+..++.|++.||.|||+.|++|+||+|.||++   +.++
T Consensus        82 ~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~  146 (277)
T 3f3z_A           82 YLVMELCTGGELFERVVHKR---------------VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDS  146 (277)
T ss_dssp             EEEEECCCSCBHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTC
T ss_pred             EEEEeccCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCC
Confidence            47899999999999998754               49999999999999999999999999999999999999   7778


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++++|||++.......  ......+++.|+|||.+.+ .++.++|+||+|+++++|+ +|..||......+....+...
T Consensus       147 ~~~l~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~~~~~~~~~~~  222 (277)
T 3f3z_A          147 PLKLIDFGLAARFKPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLL-CGYPPFSAPTDSEVMLKIREG  222 (277)
T ss_dssp             CEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHC
T ss_pred             cEEEEecccceeccCcc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHH-HCCCCCCCCCHHHHHHHHHhC
Confidence            99999999987544322  2244567889999999865 4889999999999999999 799999998888888777766


Q ss_pred             cccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+..  ..+++.+.+++.+||+.||.+||++.+++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          223 TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             CCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            4433221  2578899999999999999999999999875

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2e-34  Score=232.55  Aligned_cols=176  Identities=16%  Similarity=0.253  Sum_probs=145.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.++++..+               .+++..+..++.||+.||.|||+.|++||||||.||+++.++.+
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~v  154 (384)
T 4fr4_A           90 MFMVVDLLLGGDLRYHLQQNV---------------HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHV  154 (384)
T ss_dssp             EEEEECCCTTEEHHHHHHTTC---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCE
T ss_pred             EEEEEecCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCE
Confidence            348899999999999998643               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc---CCCCcccchHHHHHHHHHHHhCCCCCCCCCC---HHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD---DEFSTKSDVYAYACLIWEIFNKGEMPFPDLS---DDQVLSQ  170 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~~Di~slG~il~~l~~~~~~p~~~~~---~~~~~~~  170 (223)
                      +|+|||++.......  ......+++.|+|||.+..   ..++.++|+||+||++|+|+ +|..||....   ..+....
T Consensus       155 kL~DFG~a~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~ell-tG~~Pf~~~~~~~~~~~~~~  231 (384)
T 4fr4_A          155 HITDFNIAAMLPRET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELL-RGRRPYHIRSSTSSKEIVHT  231 (384)
T ss_dssp             EECCCTTCEECCTTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHH-HSSCSSCCCTTSCHHHHHHH
T ss_pred             EEeccceeeeccCCC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHH-hCCCCCCCCCCccHHHHHHH
Confidence            999999997543322  2345678999999999864   34788999999999999999 7999997443   3444444


Q ss_pred             HHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCC-HHHHHHH
Q psy15108        171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT-FPSIVTQ  212 (223)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-~~~ll~~  212 (223)
                      +...  ....+..++.++.+++.+||+.||.+||+ ++++++|
T Consensus       232 ~~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h  272 (384)
T 4fr4_A          232 FETT--VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF  272 (384)
T ss_dssp             HHHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred             Hhhc--ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence            4443  23445678999999999999999999998 7777653

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-34  Score=229.99  Aligned_cols=179  Identities=17%  Similarity=0.208  Sum_probs=146.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||+.+++||||||.||+++.++.+
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~  198 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRE---------------RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHV  198 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCE
T ss_pred             EEEEeecCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcE
Confidence            348999999999999998754               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCC----HHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYACLIWEIFNKGEMPFPDLS----DDQVLSQ  170 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~~l~~~~~~p~~~~~----~~~~~~~  170 (223)
                      +|+|||++...............++..|+|||.+.+  ..++.++|||||||++|+|+ +|..||....    ...+...
T Consensus       199 kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell-~g~~pf~~~~~~~~~~~~~~~  277 (355)
T 1vzo_A          199 VLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL-TGASPFTVDGEKNSQAEISRR  277 (355)
T ss_dssp             EESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHH-HSSCTTSCTTSCCCHHHHHHH
T ss_pred             EEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHH-HCCCCCccCCccchHHHHHHH
Confidence            999999987654433333344568899999999875  34688999999999999999 7999996432    3333333


Q ss_pred             HHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHHH
Q psy15108        171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQL  213 (223)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~L  213 (223)
                      +...  ....+..++..+.+++.+||+.||.+||     ++++++++.
T Consensus       278 ~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          278 ILKS--EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             HHHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             Hhcc--CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence            3333  2344567889999999999999999999     999998764

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=4.3e-35  Score=232.04  Aligned_cols=178  Identities=12%  Similarity=0.284  Sum_probs=128.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC---
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~---   94 (223)
                      .+||||+.+|+|.++++..+               .+++..+..++.|+++||.|||+.|++||||||.||+++.++   
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~  146 (325)
T 3kn6_A           82 FLVMELLNGGELFERIKKKK---------------HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNL  146 (325)
T ss_dssp             EEEECCCCSCBHHHHHHHCS---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----C
T ss_pred             EEEEEccCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcc
Confidence            38899999999999998653               499999999999999999999999999999999999998765   


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-------HHH
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-------DQV  167 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-------~~~  167 (223)
                      .++++|||++....... .......++..|+|||.+.+..++.++||||+|+++|+|+ +|..||.....       .+.
T Consensus       147 ~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~~~~~  224 (325)
T 3kn6_A          147 EIKIIDFGFARLKPPDN-QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTML-SGQVPFQSHDRSLTCTSAVEI  224 (325)
T ss_dssp             EEEECCCTTCEECCC-----------------------CCCCHHHHHHHHHHHHHHHH-HSSCTTC-------CCCHHHH
T ss_pred             cEEEeccccceecCCCC-CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHH-hCCCCCCCCccccccccHHHH
Confidence            79999999997543322 1223456688999999999888999999999999999999 79999976433       345


Q ss_pred             HHHHHhCcccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        168 LSQLESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       168 ~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+..+.......  ..+++++++++.+||+.||.+||++++++++
T Consensus       225 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          225 MKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             HHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             HHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence            55555543332211  3578899999999999999999999998754

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.5e-35  Score=234.40  Aligned_cols=179  Identities=21%  Similarity=0.216  Sum_probs=146.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.++++..               ..+++..+..++.|++.||.|||+.|++||||||.||+++.++.++
T Consensus        81 ~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~k  145 (323)
T 3tki_A           81 YLFLEYCSGGELFDRIEPD---------------IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLK  145 (323)
T ss_dssp             EEEEECCTTEEGGGGSBTT---------------TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred             EEEEEcCCCCcHHHHHhhc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEE
Confidence            3889999999999999654               3499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh-hhhhhcCCcccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhC
Q psy15108         98 ISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESK  174 (223)
Q Consensus        98 l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~~~~~~  174 (223)
                      |+|||++....... ........+++.|+|||.+.+..+ +.++||||+|+++|+|+ +|..||...... .........
T Consensus       146 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~~~~~~  224 (323)
T 3tki_A          146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEK  224 (323)
T ss_dssp             ECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHH-HSSCSCSSSCTTSHHHHHHHTT
T ss_pred             EEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHH-hCCCCCCCCchHHHHHHHHhcc
Confidence            99999997543222 112234578899999999987765 67899999999999999 799999866543 333333333


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .........++..+.+++.+||+.||.+|||++|++++
T Consensus       225 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          225 KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            23333335678999999999999999999999999875

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=2.6e-34  Score=223.25  Aligned_cols=174  Identities=21%  Similarity=0.255  Sum_probs=151.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+.+|+|.+++...+               .+++..+..++.|+++||.|||+.|++|+||+|+||+++.++.++
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~k  154 (284)
T 2vgo_A           90 YLMLEFAPRGELYKELQKHG---------------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELK  154 (284)
T ss_dssp             EEEECCCTTEEHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEE
T ss_pred             EEEEEeCCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEE
Confidence            37899999999999998754               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++......   ......++..|+|||.+.+..++.++|+||+|+++|+++ +|..||...........+....  
T Consensus       155 l~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~--  228 (284)
T 2vgo_A          155 IADFGWSVHAPSL---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL-VGMPPFDSPSHTETHRRIVNVD--  228 (284)
T ss_dssp             ECCCTTCEECSSS---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHHHTTC--
T ss_pred             EecccccccCccc---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHH-HCCCCCCCCCHhHHHHHHhccc--
Confidence            9999988654322   123456788999999998888999999999999999999 7999999888877776666543  


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+..++.++.+++.+||+.||.+||+++++++|
T Consensus       229 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          229 LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence            33456788999999999999999999999999875

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=2.4e-34  Score=233.01  Aligned_cols=176  Identities=18%  Similarity=0.302  Sum_probs=142.3

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +||| +.+++|.++++..+               .+++..+..++.||+.||.|||+.+++||||||.||+++ ++.++|
T Consensus       133 lv~E-~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl  195 (390)
T 2zmd_A          133 MVME-CGNIDLNSWLKKKK---------------SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKL  195 (390)
T ss_dssp             EEEE-CCSEEHHHHHHHCS---------------SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEE
T ss_pred             EEEe-cCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEE
Confidence            6777 78899999998653               489999999999999999999999999999999999995 578999


Q ss_pred             cCCCCCcccchhh-hhhhhcCCccccccccccccc-----------CCCCcccchHHHHHHHHHHHhCCCCCCCCCC-HH
Q psy15108         99 SLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFD-----------DEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DD  165 (223)
Q Consensus        99 ~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~-----------~~~~~~~Di~slG~il~~l~~~~~~p~~~~~-~~  165 (223)
                      +|||++....... ........+++.|+|||.+..           ..++.++|||||||++|+|+ +|..||.... ..
T Consensus       196 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell-~G~~Pf~~~~~~~  274 (390)
T 2zmd_A          196 IDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT-YGKTPFQQIINQI  274 (390)
T ss_dssp             CCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHH-HSSCTTTTCCCHH
T ss_pred             EecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHH-HCCCcchhhhHHH
Confidence            9999997654332 112345678999999999864           35788999999999999999 7999998754 33


Q ss_pred             HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+.........+...+.++.+++.+||+.||.+||++.+++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          275 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            45555555545555566678899999999999999999999999876

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=7.7e-36  Score=236.18  Aligned_cols=187  Identities=20%  Similarity=0.272  Sum_probs=146.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCCCCCeeeecC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK---RLIHKDIAARNCLISSD   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~~~nil~~~~   93 (223)
                      ..+|+||+.+|+|.++++....           ...++++..+..++.|++.||.|||+.   |++|+||||.||+++.+
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~  170 (326)
T 3uim_A          102 RLLVYPYMANGSVASCLRERPE-----------SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE  170 (326)
T ss_dssp             CEEEEECCTTCBHHHHHHCCST-----------TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred             eEEEEEeccCCCHHHHHHhccc-----------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence            3478999999999999986543           334699999999999999999999999   99999999999999999


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC-----CHHHHH
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL-----SDDQVL  168 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~-----~~~~~~  168 (223)
                      +.++++|||++...............+++.|+|||.+.+..++.++||||+|+++|+|+ +|..||...     ......
T Consensus       171 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~~~~  249 (326)
T 3uim_A          171 FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI-TGQRAFDLARLANDDDVMLL  249 (326)
T ss_dssp             CCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHH-HCCCSBCHHHHTTTSCSBHH
T ss_pred             CCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHH-hCCCcccccccccccchhHH
Confidence            99999999999755433322233455889999999998888999999999999999999 799999521     111111


Q ss_pred             HHHHh---Cc---------ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        169 SQLES---KK---------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       169 ~~~~~---~~---------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ..+..   ..         .....+...+..+.+++.+||+.||.+|||+++++++|+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          250 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             HHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             HHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            11111   00         0011112234778999999999999999999999999975

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.7e-34  Score=227.31  Aligned_cols=172  Identities=18%  Similarity=0.129  Sum_probs=137.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|+||+ +|+|.+++...+.              .+++..++.++.|++.||.|||+.+++|+||||+||+++.++.+++
T Consensus       134 lv~e~~-~~~L~~~~~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl  198 (311)
T 3p1a_A          134 LQTELC-GPSLQQHCEAWGA--------------SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKL  198 (311)
T ss_dssp             EEEECC-CCBHHHHHHHHCS--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEE
T ss_pred             EEEecc-CCCHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEE
Confidence            678888 7899999987643              6999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW  178 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~  178 (223)
                      +|||++.......  ......+++.|+|||.+.+ .++.++||||||+++|+|+ +|..|+...   .....+.......
T Consensus       199 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~-~g~~~~~~~---~~~~~~~~~~~~~  271 (311)
T 3p1a_A          199 GDFGLLVELGTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVA-CNMELPHGG---EGWQQLRQGYLPP  271 (311)
T ss_dssp             CCCTTCEECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHH-HTCCCCSSH---HHHHHHTTTCCCH
T ss_pred             ccceeeeecccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHH-hCCCCCCCc---cHHHHHhccCCCc
Confidence            9999987654332  2234568899999998865 7899999999999999999 454444332   2233344433333


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        179 KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       179 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..+..+++++.+++.+||+.||++||++++++++
T Consensus       272 ~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          272 EFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence            3345678999999999999999999999999874

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=7.9e-35  Score=231.96  Aligned_cols=179  Identities=17%  Similarity=0.308  Sum_probs=147.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC---
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD---   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~---   93 (223)
                      ..+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||+||++...   
T Consensus        91 ~~lv~E~~~gg~L~~~i~~~~---------------~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~  155 (342)
T 2qr7_A           91 VYVVTELMKGGELLDKILRQK---------------FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGN  155 (342)
T ss_dssp             EEEEECCCCSCBHHHHHHTCT---------------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCS
T ss_pred             EEEEEeCCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCC
Confidence            348999999999999998653               49999999999999999999999999999999999998543   


Q ss_pred             -CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCC---CCHHHHHH
Q psy15108         94 -LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD---LSDDQVLS  169 (223)
Q Consensus        94 -~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~---~~~~~~~~  169 (223)
                       +.++++|||++........ ......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||.+   ....++..
T Consensus       156 ~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~~~~~~~~~~  233 (342)
T 2qr7_A          156 PESIRICDFGFAKQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML-TGYTPFANGPDDTPEEILA  233 (342)
T ss_dssp             GGGEEECCCTTCEECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HSSCSSCSSTTSCHHHHHH
T ss_pred             cCeEEEEECCCcccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHh-cCCCCCCCCCcCCHHHHHH
Confidence             3499999999975433221 123456788999999998777889999999999999999 79999975   34556666


Q ss_pred             HHHhCcccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        170 QLESKKLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       170 ~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+..+.....  ....+++++.+++.+||+.||++||++.++++|
T Consensus       234 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          234 RIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             HHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             HHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            6666544432  235688999999999999999999999999876

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=3.1e-34  Score=223.44  Aligned_cols=175  Identities=19%  Similarity=0.285  Sum_probs=145.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCCCCCeeee-cCC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLIS-SDL   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~~~nil~~-~~~   94 (223)
                      .+|+||+.+|+|.++++..+               .+++..++.++.|++.||.|||+.+  ++|+||+|.||+++ .++
T Consensus       105 ~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~  169 (290)
T 1t4h_A          105 VLVTELMTSGTLKTYLKRFK---------------VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTG  169 (290)
T ss_dssp             EEEEECCCSCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTS
T ss_pred             EEEEEecCCCCHHHHHHHcc---------------CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCC
Confidence            47899999999999998654               4899999999999999999999999  99999999999997 778


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHh
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES  173 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-~~~~~~~~~  173 (223)
                      .++++|||++......   ......++..|+|||.+. ..++.++|+||+|+++++|+ +|..||..... ......+..
T Consensus       170 ~~kl~Dfg~~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~-~g~~pf~~~~~~~~~~~~~~~  244 (290)
T 1t4h_A          170 SVKIGDLGLATLKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMA-TSEYPYSECQNAAQIYRRVTS  244 (290)
T ss_dssp             CEEECCTTGGGGCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHH-HSSCTTTTCSSHHHHHHHHTT
T ss_pred             CEEEeeCCCccccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHH-hCCCCCCCcCcHHHHHHHHhc
Confidence            9999999998643322   123456788999999875 45899999999999999999 79999987544 444555544


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .......+...++++.+++.+||+.||.+||+++++++|
T Consensus       245 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          245 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            433333445667889999999999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=5.1e-34  Score=221.34  Aligned_cols=179  Identities=21%  Similarity=0.256  Sum_probs=148.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.+++.....             ..+++..++.++.|++.||.|||+.|++|+||+|.||+++.++.++
T Consensus        96 ~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k  162 (284)
T 2a19_B           96 FIQMEFCDKGTLEQWIEKRRG-------------EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVK  162 (284)
T ss_dssp             EEEECCCCSCBHHHHHHHGGG-------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEE
T ss_pred             EEEEeccCCCCHHHHHhhccC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEE
Confidence            478999999999999987643             4699999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++.......  ......++..|+|||.+.+..++.++|+||||+++|+|+ ++..|+..  .......+...   
T Consensus       163 l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~~~~~~~~--~~~~~~~~~~~---  234 (284)
T 2a19_B          163 IGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-HVCDTAFE--TSKFFTDLRDG---  234 (284)
T ss_dssp             ECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHH-SCCSSHHH--HHHHHHHHHTT---
T ss_pred             ECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHH-hcCCcchh--HHHHHHHhhcc---
Confidence            99999987543322  123446788999999998888999999999999999999 67777642  12223333322   


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                       ..+..++..+.+++.+||+.||.+||++.+++++|..+..
T Consensus       235 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          235 -IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             -cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence             2345678899999999999999999999999999988754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.4e-35  Score=234.37  Aligned_cols=190  Identities=19%  Similarity=0.254  Sum_probs=147.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++.....           ....+++..++.++.|+++||.|||+.|++|+||||.||+++.++.+
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~  178 (321)
T 2qkw_B          110 MILIYKYMENGNLKRHLYGSDL-----------PTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVP  178 (321)
T ss_dssp             CEEEEECCTTCBTGGGSSSSCC-----------CSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCE
T ss_pred             EEEEEEcCCCCcHHHHHhccCC-----------CccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCE
Confidence            4488999999999999965432           22358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH---H----
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV---L----  168 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~---~----  168 (223)
                      +++|||++....... ........++..|+|||.+.+..++.++||||||+++|+|+ +|..||........   .    
T Consensus       179 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell-~g~~p~~~~~~~~~~~~~~~~~  257 (321)
T 2qkw_B          179 KITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL-CARSAIVQSLPREMVNLAEWAV  257 (321)
T ss_dssp             EECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHH-HCCTTCSCSSSSSCCCHHHHTH
T ss_pred             EEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHH-hCCCcccccCcHHHHHHHHHhh
Confidence            999999987543221 11122345688899999998888999999999999999999 78888865432211   1    


Q ss_pred             HHHHhCcc--------cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        169 SQLESKKL--------CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       169 ~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      ........        ........+..+.+++.+||+.||++||++++++++|+.++.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             HHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            11111101        111122346778999999999999999999999999998864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=9.8e-35  Score=229.29  Aligned_cols=186  Identities=23%  Similarity=0.332  Sum_probs=151.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++..                ..+++..++.++.|++.||.|||+.|++|+||||.||+++.++.+
T Consensus       110 ~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~  173 (318)
T 3lxp_A          110 LQLVMEYVPLGSLRDYLPR----------------HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLV  173 (318)
T ss_dssp             EEEEECCCTTCBHHHHGGG----------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCE
T ss_pred             EEEEEecccCCcHHHHHhh----------------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCE
Confidence            3488999999999999964                248999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---------
Q psy15108         97 KISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD---------  165 (223)
Q Consensus        97 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~---------  165 (223)
                      +++|||++.......  ........++..|+|||.+.+..++.++||||+|+++++|+ +|..||......         
T Consensus       174 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll-~g~~p~~~~~~~~~~~~~~~~  252 (318)
T 3lxp_A          174 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL-THCDSSQSPPTKFLELIGIAQ  252 (318)
T ss_dssp             EECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH-TTTCGGGSHHHHHHHHHCSCC
T ss_pred             EECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHH-hCCCcccccchhhhhhhcccc
Confidence            999999987654322  11223445677899999998888899999999999999999 788888653221         


Q ss_pred             -----HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        166 -----QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       166 -----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                           .............+.+..++.++.+++.+||+.||.+||+++++++.|+++.+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  311 (318)
T 3lxp_A          253 GQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK  311 (318)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence                 011122223345556778899999999999999999999999999999988654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=3.6e-34  Score=238.59  Aligned_cols=177  Identities=18%  Similarity=0.275  Sum_probs=152.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC---
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD---   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~---   93 (223)
                      ..+|||||.+|+|.+++....               .+++..+..++.||++||.|||+.|++||||||.||+++..   
T Consensus       111 ~~lv~e~~~~g~L~~~~~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  175 (494)
T 3lij_A          111 YYLVMECYKGGELFDEIIHRM---------------KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKD  175 (494)
T ss_dssp             EEEEEECCCSCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTT
T ss_pred             EEEEEecCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCC
Confidence            347899999999999998764               49999999999999999999999999999999999999764   


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +.++++|||++.......  ......+++.|+|||.+. ..++.++||||+||++|+|+ +|..||.+....+....+..
T Consensus       176 ~~~kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~i~~  251 (494)
T 3lij_A          176 ALIKIVDFGLSAVFENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILL-AGYPPFGGQTDQEILRKVEK  251 (494)
T ss_dssp             CCEEECCCTTCEECBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHH
T ss_pred             CcEEEEECCCCeECCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHh
Confidence            459999999987654332  234457889999999875 56899999999999999999 79999999999888888877


Q ss_pred             CcccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .......+  ..+++++++++.+||+.||.+|||+.++++|
T Consensus       252 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          252 GKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             TCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             CCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence            65544332  4678999999999999999999999999876

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=5.5e-35  Score=231.58  Aligned_cols=179  Identities=16%  Similarity=0.240  Sum_probs=148.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec---CC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DL   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~---~~   94 (223)
                      .+|+||+.+|+|.+++.....             ..+++..++.++.|++.||.|||+.|++||||||.||+++.   .+
T Consensus       105 ~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~  171 (327)
T 3lm5_A          105 ILILEYAAGGEIFSLCLPELA-------------EMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLG  171 (327)
T ss_dssp             EEEEECCTTEEGGGGGSSCC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBC
T ss_pred             EEEEEecCCCcHHHHHHHhcc-------------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCC
Confidence            388999999999999864322             46999999999999999999999999999999999999987   68


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++++|||++.......  ......+++.|+|||.+.+..++.++|+||+|+++|+|+ +|..||...........+...
T Consensus       172 ~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~i~~~  248 (327)
T 3lm5_A          172 DIKIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLL-THTSPFVGEDNQETYLNISQV  248 (327)
T ss_dssp             CEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHT
T ss_pred             cEEEeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCchHHHHHHHhc
Confidence            99999999997654332  223456889999999999889999999999999999999 799999998887777666554


Q ss_pred             cccC--CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCW--KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....  .....+++.+.+++.+||+.||.+||++++++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          249 NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            3322  3335688999999999999999999999999875

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.9e-34  Score=231.18  Aligned_cols=176  Identities=15%  Similarity=0.242  Sum_probs=143.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec-----
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-----   92 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~-----   92 (223)
                      .+||||+ +++|.+++...+.             ..+++..+..++.||+.||.|||+.|++||||||.||+++.     
T Consensus       112 ~lv~e~~-~~~L~~~~~~~~~-------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~  177 (360)
T 3llt_A          112 CLIFEPL-GPSLYEIITRNNY-------------NGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEK  177 (360)
T ss_dssp             EEEECCC-CCBHHHHHHHTTT-------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCE
T ss_pred             EEEEcCC-CCCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccc
Confidence            3789999 9999999987654             45999999999999999999999999999999999999974     


Q ss_pred             --------------------CCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHH
Q psy15108         93 --------------------DLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF  152 (223)
Q Consensus        93 --------------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~  152 (223)
                                          .+.++++|||++......    .....+++.|+|||.+.+..++.++||||+||++|+|+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  253 (360)
T 3llt_A          178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY  253 (360)
T ss_dssp             EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred             cccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence                                778999999999753322    23456789999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCHHHHHHHHHhCccc--------------------------CCCC------------------CCChHHH
Q psy15108        153 NKGEMPFPDLSDDQVLSQLESKKLC--------------------------WKHS------------------SKTPEYI  188 (223)
Q Consensus       153 ~~~~~p~~~~~~~~~~~~~~~~~~~--------------------------~~~~------------------~~~~~~~  188 (223)
                       +|..||......+....+......                          ++..                  ...++.+
T Consensus       254 -~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l  332 (360)
T 3llt_A          254 -TGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF  332 (360)
T ss_dssp             -HSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHH
T ss_pred             -HCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHH
Confidence             799999888776655554331110                          0000                  0112667


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        189 TSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       189 ~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+++.+||+.||.+|||++|+++|
T Consensus       333 ~~li~~~L~~dP~~Rpta~elL~h  356 (360)
T 3llt_A          333 CDFLYSILQIDPTLRPSPAELLKH  356 (360)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHhcCChhhCCCHHHHhcC
Confidence            899999999999999999999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.1e-34  Score=234.91  Aligned_cols=181  Identities=18%  Similarity=0.252  Sum_probs=142.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.+++.....             ..+++..+..++.||+.||.|||+.|++||||||+||+++.++.++
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~k  168 (389)
T 3gni_B          102 WVVTSFMAYGSAKDLICTHFM-------------DGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVY  168 (389)
T ss_dssp             EEEEECCTTCBHHHHHHHTCT-------------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred             EEEEEccCCCCHHHHHhhhcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence            378999999999999987533             4599999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhh------hhhhcCCccccccccccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEY------YKYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS  169 (223)
Q Consensus        98 l~df~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~  169 (223)
                      ++|||.+........      .......++..|+|||.+.+  ..++.++||||+||++|+|+ +|..||.+.+......
T Consensus       169 l~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~  247 (389)
T 3gni_B          169 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELA-NGHVPFKDMPATQMLL  247 (389)
T ss_dssp             ECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHH-HSSCTTTTCCSTTHHH
T ss_pred             EcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHH-HCCCCCCCCCHHHHHH
Confidence            999998765432210      11123467788999999987  56899999999999999999 7999998765443332


Q ss_pred             HHHhCcc--------------------------------------------cCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy15108        170 QLESKKL--------------------------------------------CWKHSSKTPEYITSLHEKCIHPHPHQRPT  205 (223)
Q Consensus       170 ~~~~~~~--------------------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps  205 (223)
                      .+.....                                            ..+.+..+++++.+++.+||+.||.+|||
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt  327 (389)
T 3gni_B          248 EKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS  327 (389)
T ss_dssp             HC--------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCC
T ss_pred             HHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCC
Confidence            2211100                                            01123456788999999999999999999


Q ss_pred             HHHHHHH
Q psy15108        206 FPSIVTQ  212 (223)
Q Consensus       206 ~~~ll~~  212 (223)
                      ++++++|
T Consensus       328 a~ell~h  334 (389)
T 3gni_B          328 ASTLLNH  334 (389)
T ss_dssp             HHHHTTS
T ss_pred             HHHHhcC
Confidence            9999876

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=2.5e-34  Score=226.47  Aligned_cols=179  Identities=15%  Similarity=0.201  Sum_probs=140.5

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC--
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--   95 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~--   95 (223)
                      .+||||+.+|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||+||+++.++.  
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~  151 (316)
T 2ac3_A           87 YLVFEKMRGGSILSHIHKRR---------------HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVS  151 (316)
T ss_dssp             EEEEECCTTCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSC
T ss_pred             EEEEEcCCCCcHHHHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcC
Confidence            38899999999999998764               4999999999999999999999999999999999999987765  


Q ss_pred             -eEEcCCCCCcccchhh------hhhhhcCCccccccccccccc-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q psy15108         96 -VKISLSGLSKDTYQKE------YYKYRNAILPLRWLPYEAVFD-----DEFSTKSDVYAYACLIWEIFNKGEMPFPDLS  163 (223)
Q Consensus        96 -~~l~df~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~~~-----~~~~~~~Di~slG~il~~l~~~~~~p~~~~~  163 (223)
                       ++++|||++.......      ........++..|+|||.+..     ..++.++||||+|+++|+|+ +|..||.+..
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~  230 (316)
T 2ac3_A          152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL-SGYPPFVGRC  230 (316)
T ss_dssp             SEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHH-HSSCSCCCCC
T ss_pred             ceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHH-HCCCCCcccc
Confidence             9999999987543221      111223458899999999864     44788999999999999999 7999997654


Q ss_pred             H---------------HHHHHHHHhCcccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        164 D---------------DQVLSQLESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       164 ~---------------~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .               ......+.......+..  ..++.++.+++.+||+.||.+||+++++++|
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          231 GSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             CSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            2               23444455443332211  3578899999999999999999999999986

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=4.1e-34  Score=221.94  Aligned_cols=178  Identities=17%  Similarity=0.272  Sum_probs=148.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC--
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL--   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~--   94 (223)
                      ..+|+||+.+++|.+++...+               .+++..+..++.|++.||.|||+.|++|+||+|.||+++.++  
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~  147 (283)
T 3bhy_A           83 VVLILELVSGGELFDFLAEKE---------------SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP  147 (283)
T ss_dssp             EEEEEECCCSCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSS
T ss_pred             EEEEEeecCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCC
Confidence            347899999999999998653               499999999999999999999999999999999999998776  


Q ss_pred             --CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         95 --SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        95 --~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                        .++++|||++.......  ......++..|+|||.+....++.++|+||+|+++++++ +|..||.+....+....+.
T Consensus       148 ~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~  224 (283)
T 3bhy_A          148 NPRIKLIDFGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL-SGASPFLGETKQETLTNIS  224 (283)
T ss_dssp             SCCEEECCCTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHHH
T ss_pred             CCceEEEecccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHH-HCCCCCCCcchHHHHHHhH
Confidence              79999999987654332  223456788999999998888999999999999999999 7999999888877777665


Q ss_pred             hCcccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .......  .....++.+.+++.+||+.||.+||++.+++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  266 (283)
T 3bhy_A          225 AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH  266 (283)
T ss_dssp             TTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred             hcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence            5433221  124678889999999999999999999999985

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-34  Score=228.10  Aligned_cols=184  Identities=14%  Similarity=0.211  Sum_probs=145.5

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeee----ecC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI----SSD   93 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~----~~~   93 (223)
                      .+||||+.+|+|.++++....            ...+++..++.++.|+++||.|||+.|++|+||||.||++    +..
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~------------~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~  152 (319)
T 4euu_A           85 VLIMEFCPCGSLYTVLEEPSN------------AYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ  152 (319)
T ss_dssp             EEEEECCTTCBHHHHHHSGGG------------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSC
T ss_pred             EEEEeCCCCCCHHHHHHHhcc------------ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCC
Confidence            488999999999999986543            1349999999999999999999999999999999999998    666


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccc--------cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF--------DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-  164 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--------~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~-  164 (223)
                      +.++++|||++.......  ......++..|+|||.+.        +..++.++||||+||++|+|+ +|..||..... 
T Consensus       153 ~~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~  229 (319)
T 4euu_A          153 SVYKLTDFGAARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA-TGSLPFRPFEGP  229 (319)
T ss_dssp             EEEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHH-HSSCSEECTTCG
T ss_pred             ceEEEccCCCceecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCcc
Confidence            779999999997654332  223456889999999875        466889999999999999999 79999964432 


Q ss_pred             ---HHHHHHHHhCccc-------------------C----CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        165 ---DQVLSQLESKKLC-------------------W----KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       165 ---~~~~~~~~~~~~~-------------------~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                         .+....+..+.+.                   .    ......+..+.+++.+||+.||++||+++|++++.++.
T Consensus       230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             GGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             chhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence               3333333332110                   0    11123456788999999999999999999999998764

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.2e-34  Score=240.94  Aligned_cols=176  Identities=20%  Similarity=0.343  Sum_probs=151.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeee---ecCC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDL   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~---~~~~   94 (223)
                      .+|+||+.+|+|.+++...+               .+++..+..++.||+.||.|||++|++||||||.||++   +.++
T Consensus       102 ~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~  166 (484)
T 3nyv_A          102 YLVGEVYTGGELFDEIISRK---------------RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA  166 (484)
T ss_dssp             EEEECCCCSCBHHHHHHTCS---------------CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTC
T ss_pred             EEEEecCCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCC
Confidence            37899999999999997643               49999999999999999999999999999999999999   4568


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++++|||++.......  ......+++.|+|||.+.+ .++.++||||+||++|+|+ +|..||.+.+..+....+...
T Consensus       167 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~i~~~  242 (484)
T 3nyv_A          167 NIRIIDFGLSTHFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILL-SGCPPFNGANEYDILKKVEKG  242 (484)
T ss_dssp             CEEECCTTHHHHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHC
T ss_pred             cEEEEeeeeeEEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHcC
Confidence            89999999886543322  1233468899999999865 6899999999999999999 799999999998888888776


Q ss_pred             cccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......+  ..+++++++++.+||+.||.+|||++++++|
T Consensus       243 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          243 KYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             CCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence            5544332  4678999999999999999999999999875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=3.8e-34  Score=227.75  Aligned_cols=187  Identities=19%  Similarity=0.260  Sum_probs=148.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCcccCCCCCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS--------DKRLIHKDIAARNC   88 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~i~H~di~~~ni   88 (223)
                      ..+|+||+.+|+|.++++..                .+++..++.++.|++.||.|||        +.+++|+||||+||
T Consensus       115 ~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NI  178 (342)
T 1b6c_B          115 LWLVSDYHEHGSLFDYLNRY----------------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI  178 (342)
T ss_dssp             EEEEECCCTTCBHHHHHHHC----------------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGE
T ss_pred             eEEEEeecCCCcHHHHHhcc----------------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHE
Confidence            34889999999999999752                4899999999999999999999        89999999999999


Q ss_pred             eeecCCCeEEcCCCCCcccchhhhh---hhhcCCcccccccccccccCC------CCcccchHHHHHHHHHHHhCC----
Q psy15108         89 LISSDLSVKISLSGLSKDTYQKEYY---KYRNAILPLRWLPYEAVFDDE------FSTKSDVYAYACLIWEIFNKG----  155 (223)
Q Consensus        89 l~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~------~~~~~Di~slG~il~~l~~~~----  155 (223)
                      +++.++.++++|||++.........   ......++..|+|||.+....      ++.++||||||+++|+|+ +|    
T Consensus       179 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~-tg~~~~  257 (342)
T 1b6c_B          179 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA-RRCSIG  257 (342)
T ss_dssp             EECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHH-TTBCBT
T ss_pred             EECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHH-hccCcC
Confidence            9999999999999999765433211   123456889999999987653      236899999999999999 67    


Q ss_pred             ------CCCCCCCC-----HHHHHHHHHhCcccCCCCC-----CChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        156 ------EMPFPDLS-----DDQVLSQLESKKLCWKHSS-----KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       156 ------~~p~~~~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                            ..||....     .......+.........+.     .+++.+.+++.+||+.||.+||++.+++++|+++.++
T Consensus       258 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          258 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence                  77886542     3344444444333333222     3456799999999999999999999999999998765


Q ss_pred             c
Q psy15108        220 D  220 (223)
Q Consensus       220 ~  220 (223)
                      .
T Consensus       338 ~  338 (342)
T 1b6c_B          338 E  338 (342)
T ss_dssp             T
T ss_pred             h
Confidence            3

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=5.1e-34  Score=220.62  Aligned_cols=175  Identities=15%  Similarity=0.244  Sum_probs=143.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+.+++|.+++...+               .+++..+..++.|+++||.|||+.|++|+||+|.||+++.++.++
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~  151 (276)
T 2h6d_A           87 FMVMEYVSGGELFDYICKHG---------------RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK  151 (276)
T ss_dssp             EEEEECCCSCBHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEE
T ss_pred             EEEEeccCCCcHHHHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEE
Confidence            37899999999999998754               489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++.......  ......++..|+|||.+.+..+ +.++|+||+|+++++|+ +|..||...........+.....
T Consensus       152 l~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~~~~~~~~~~~~~  228 (276)
T 2h6d_A          152 IADFGLSNMMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL-CGTLPFDDEHVPTLFKKIRGGVF  228 (276)
T ss_dssp             ECCCCGGGCCCC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             EeecccccccCCCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHH-hCCCCCCCCcHHHHHHHhhcCcc
Confidence            99999987654332  1233467788999999887765 57899999999999999 69999998888777777766532


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                        ..+..++.++.+++.+||+.||.+||++++++++
T Consensus       229 --~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          229 --YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             --cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence              3356678999999999999999999999999986

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=6.9e-34  Score=227.96  Aligned_cols=176  Identities=17%  Similarity=0.241  Sum_probs=144.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~~~   96 (223)
                      .+||||+.+|+|.++++..+               .+++..+..++.|++.||.|||+. |++|+||||.||+++.++.+
T Consensus       107 ~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~  171 (360)
T 3eqc_A          107 SICMEHMDGGSLDQVLKKAG---------------RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI  171 (360)
T ss_dssp             EEEECCCTTCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCE
T ss_pred             EEEEECCCCCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCE
Confidence            38899999999999998764               499999999999999999999996 99999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHH-------
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS-------  169 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~-------  169 (223)
                      +++|||++......   ......++..|+|||.+.+..++.++||||+|+++|+|+ +|..||..........       
T Consensus       172 kl~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~~  247 (360)
T 3eqc_A          172 KLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA-VGRYPIPPPDAKELELMFGCQVE  247 (360)
T ss_dssp             EECCCCCCHHHHHH---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHH-HTSCCSSCCCHHHHHHHHC----
T ss_pred             EEEECCCCcccccc---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHhccccc
Confidence            99999998644322   223457789999999999888999999999999999999 7999998766543321       


Q ss_pred             -----------------------------------HHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        170 -----------------------------------QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       170 -----------------------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                                         .+............++.++.+++.+||+.||.+|||++++++|
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          248 GDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             --------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             ccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence                                               1222212222234568899999999999999999999999976

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.6e-35  Score=238.93  Aligned_cols=173  Identities=12%  Similarity=0.080  Sum_probs=136.5

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++|||+ +|+|.++++..+.-        ......+++..++.++.||++||.|||+.|++||||||.||+++.++.+||
T Consensus       177 lv~E~~-~g~L~~~l~~~~~~--------~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL  247 (377)
T 3byv_A          177 FLYPRM-QSNLQTFGEVLLSH--------SSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFL  247 (377)
T ss_dssp             EEEECC-SEEHHHHHHHHHHT--------TTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred             EEEecc-CCCHHHHHHhcccc--------ccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEE
Confidence            778888 68999999976540        011123455889999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccC-----------CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-----------EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV  167 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-----------~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~  167 (223)
                      +|||+++....    ......+ ..|+|||.+.+.           .++.++|||||||++|+|+ +|..||.+......
T Consensus       248 ~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell-tg~~Pf~~~~~~~~  321 (377)
T 3byv_A          248 TGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW-CADLPITKDAALGG  321 (377)
T ss_dssp             CCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH-HSSCCC------CC
T ss_pred             EechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH-HCCCCCcccccccc
Confidence            99999975332    1233455 889999999877           7899999999999999999 69999976554332


Q ss_pred             HHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+      ......+++++.+++.+||+.||.+||++.+++++
T Consensus       322 ~~~~------~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          322 SEWI------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             SGGG------GSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             hhhh------hhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence            2221      12235788999999999999999999999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2e-34  Score=233.34  Aligned_cols=178  Identities=17%  Similarity=0.216  Sum_probs=143.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+. |+|.++++..                .+++..+..++.|++.||.|||+.|++||||||+||+++.++.+
T Consensus        86 ~~lv~e~~~-~~L~~~~~~~----------------~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~  148 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRAN----------------ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHV  148 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHHT----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCE
T ss_pred             EEEEecccC-cCHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCE
Confidence            347889987 6999999752                48999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchh--------------------hhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCC
Q psy15108         97 KISLSGLSKDTYQK--------------------EYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKG  155 (223)
Q Consensus        97 ~l~df~~~~~~~~~--------------------~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~  155 (223)
                      +++|||+++.....                    .........+++.|+|||.+.+ ..++.++||||+||++|+|+ +|
T Consensus       149 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell-~g  227 (388)
T 3oz6_A          149 KVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL-CG  227 (388)
T ss_dssp             EECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH-HS
T ss_pred             EecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHH-hC
Confidence            99999999754210                    1112234578899999999876 56899999999999999999 79


Q ss_pred             CCCCCCCCHHHHHHHHHhCcccC---------------------------------------------CCCCCChHHHHH
Q psy15108        156 EMPFPDLSDDQVLSQLESKKLCW---------------------------------------------KHSSKTPEYITS  190 (223)
Q Consensus       156 ~~p~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~  190 (223)
                      ..||.+.+....+..+......+                                             .....+++++.+
T Consensus       228 ~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  307 (388)
T 3oz6_A          228 KPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALD  307 (388)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHH
Confidence            99999888766655543210000                                             011256788999


Q ss_pred             HHHHhcCCCCCCCCCHHHHHHH
Q psy15108        191 LHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       191 li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ++.+||+.||.+|||++|+++|
T Consensus       308 ll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          308 LLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             HHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHhhccCcccCCCHHHHhCC
Confidence            9999999999999999999987

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.4e-34  Score=227.72  Aligned_cols=187  Identities=21%  Similarity=0.340  Sum_probs=150.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+++|+|.++++..+.              .+++..++.++.|+++||.|||+.|++|+||||.||+++.++.+
T Consensus       119 ~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~  184 (326)
T 2w1i_A          119 LKLIMEYLPYGSLRDYLQKHKE--------------RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV  184 (326)
T ss_dssp             CEEEECCCTTCBHHHHHHHSTT--------------SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEE
T ss_pred             eEEEEECCCCCCHHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcE
Confidence            4478999999999999987533              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh--hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH----------
Q psy15108         97 KISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----------  164 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~----------  164 (223)
                      +++|||++........  .......++..|+|||.+.+..++.++||||||+++++|+ +|..|+.....          
T Consensus       185 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~-tg~~~~~~~~~~~~~~~~~~~  263 (326)
T 2w1i_A          185 KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF-TYIEKSKSPPAEFMRMIGNDK  263 (326)
T ss_dssp             EECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH-HTTCGGGSHHHHHHHHHCTTC
T ss_pred             EEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHH-hcCCCCCCCHHHHHHhhcccc
Confidence            9999999876543221  1122345567799999998888899999999999999999 67777753211          


Q ss_pred             --H----HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        165 --D----QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       165 --~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                        .    .....+... ...+.+..++.++.+++.+||+.||.+||++.++++.|+.+.+.
T Consensus       264 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          264 QGQMIVFHLIELLKNN-GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             CTHHHHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHHhhcC-CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence              0    112222222 34455678899999999999999999999999999999987643

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=4.5e-34  Score=238.57  Aligned_cols=176  Identities=17%  Similarity=0.262  Sum_probs=152.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC---
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~---   94 (223)
                      .+|||||.+|+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||.||+++.++   
T Consensus       122 ~lv~e~~~gg~L~~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~  186 (504)
T 3q5i_A          122 YLVTEFYEGGELFEQIINRH---------------KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLL  186 (504)
T ss_dssp             EEEEECCTTCBHHHHHHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCS
T ss_pred             EEEEecCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCc
Confidence            37899999999999998764               499999999999999999999999999999999999998775   


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++++|||++.......  ......+++.|+|||.+. ..++.++||||+||++|+|+ +|..||.+.+..+....+...
T Consensus       187 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~i~~~  262 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILL-CGYPPFGGQNDQDIIKKVEKG  262 (504)
T ss_dssp             SEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHC
T ss_pred             cEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHcC
Confidence            69999999997554322  234457889999999976 56899999999999999999 799999999998888888776


Q ss_pred             cccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......  ...+++++++++.+||+.||.+|||++++++|
T Consensus       263 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          263 KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            543322  25678999999999999999999999999875

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=4.9e-34  Score=224.66  Aligned_cols=178  Identities=22%  Similarity=0.302  Sum_probs=141.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+. |+|.+++...+.              .+++..+..++.|++.||.|||+.|++||||||+||+++.++.++
T Consensus        95 ~lv~e~~~-~~l~~~~~~~~~--------------~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~k  159 (311)
T 3niz_A           95 TLVFEFME-KDLKKVLDENKT--------------GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALK  159 (311)
T ss_dssp             EEEEECCS-EEHHHHHHTCTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred             EEEEcCCC-CCHHHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEE
Confidence            37889988 589988876433              599999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++....... .......++..|+|||.+.+ ..++.++||||+||++|+|+ +|..||.+.........+.....
T Consensus       160 l~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~i~~~~~  237 (311)
T 3niz_A          160 LADFGLARAFGIPV-RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMI-TGKPLFPGVTDDDQLPKIFSILG  237 (311)
T ss_dssp             ECCCTTCEETTSCC-C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHH-HSSCSCCCSSTTTHHHHHHHHHC
T ss_pred             EccCcCceecCCCc-ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHHC
Confidence            99999997543221 12234567889999999876 45899999999999999999 79999987766555444432100


Q ss_pred             cC----------------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CW----------------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~----------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..                            .....+++++.+++.+||+.||++|||++|+++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          238 TPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             CCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            00                            0013456789999999999999999999999875

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.1e-35  Score=237.73  Aligned_cols=176  Identities=11%  Similarity=0.114  Sum_probs=139.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHH------HHHHHHHHHHHHHhhcCCcccCCCCCCCeee
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQA------VTMAYQVALGLEHISDKRLIHKDIAARNCLI   90 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~i~H~di~~~nil~   90 (223)
                      ..+||||+. |+|.++++..+.              .+++..+      ..++.||++||.|||++|++||||||+||++
T Consensus       163 ~~lv~e~~~-~~L~~~l~~~~~--------------~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll  227 (371)
T 3q60_A          163 YLLLMPAAS-VDLELLFSTLDF--------------VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI  227 (371)
T ss_dssp             EEEEECCCS-EEHHHHHHHHHH--------------SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE
T ss_pred             EEEEecCCC-CCHHHHHHHhcc--------------ccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEE
Confidence            357899999 999999998654              3455555      6778999999999999999999999999999


Q ss_pred             ecCCCeEEcCCCCCcccchhhhhhhhcCCccccccccccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH-
Q psy15108         91 SSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV-  167 (223)
Q Consensus        91 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~-  167 (223)
                      +.++.++|+|||++.......    ....+++.|+|||.+.+  ..++.++|||||||++|+|+ +|..||.+...... 
T Consensus       228 ~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ell-tg~~Pf~~~~~~~~~  302 (371)
T 3q60_A          228 MPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW-CLFLPFGLVTPGIKG  302 (371)
T ss_dssp             CTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHH-HSSCSTTBCCTTCTT
T ss_pred             CCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHH-hCCCCCCCcCccccc
Confidence            999999999999987553322    13445688999999987  67899999999999999999 69999976643210 


Q ss_pred             -HH-----HHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        168 -LS-----QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       168 -~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       ..     .........+....+++.+.+++.+||+.||++||++.++++|
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  353 (371)
T 3q60_A          303 SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET  353 (371)
T ss_dssp             CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred             chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence             00     0001112233335789999999999999999999999999764

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=3.8e-34  Score=240.36  Aligned_cols=178  Identities=19%  Similarity=0.309  Sum_probs=149.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++...+.             ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+
T Consensus       259 l~lVmEy~~gg~L~~~l~~~~~-------------~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~v  325 (576)
T 2acx_A          259 LCLVLTLMNGGDLKFHIYHMGQ-------------AGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHI  325 (576)
T ss_dssp             EEEEECCCCSCBHHHHHHSSSS-------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCE
T ss_pred             EEEEEEcCCCCcHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCe
Confidence            3489999999999999986433             459999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS----DDQVLSQLE  172 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~----~~~~~~~~~  172 (223)
                      +|+|||++.......  ......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||....    ...+...+.
T Consensus       326 KL~DFGla~~~~~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLl-tG~~PF~~~~~~~~~~~i~~~i~  402 (576)
T 2acx_A          326 RISDLGLAVHVPEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI-AGQSPFQQRKKKIKREEVERLVK  402 (576)
T ss_dssp             EECCCTTCEECCTTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHH-HSSCSSSCSSSCCCHHHHHHHHH
T ss_pred             EEEecccceecccCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHH-hCCCCCcccccchhHHHHHHHhh
Confidence            999999997654322  223457899999999998888999999999999999999 7999998653    334444444


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                      ...  ...+..+++++.+++.+||+.||.+||     +++|+++|
T Consensus       403 ~~~--~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          403 EVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             HCC--CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             ccc--ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence            432  334567899999999999999999999     78888865

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=5.5e-34  Score=226.56  Aligned_cols=177  Identities=19%  Similarity=0.290  Sum_probs=152.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+++|.+++...+               .+++..++.++.|+++||.|||+.|++|+||+|.||+++.++.+
T Consensus       116 ~~lv~e~~~~~~L~~~~~~~~---------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~  180 (335)
T 2owb_A          116 VFVVLELCRRRSLLELHKRRK---------------ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV  180 (335)
T ss_dssp             EEEEECCCTTCBHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCE
T ss_pred             EEEEEecCCCCCHHHHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCE
Confidence            348899999999999998754               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +++|||++....... .......++..|++||.+.+..++.++|+||||+++|+|+ +|..||......+....+.....
T Consensus       181 kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~~  258 (335)
T 2owb_A          181 KIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKETYLRIKKNEY  258 (335)
T ss_dssp             EECCCTTCEECCSTT-CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHHHHTCC
T ss_pred             EEeeccCceecccCc-ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHH-HCcCCCCCCCHHHHHHHHhcCCC
Confidence            999999987543221 1123456788899999998888899999999999999999 79999998887777766665433


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                        ..+..++.++.+++.+||+.||++||++++++++
T Consensus       259 --~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          259 --SIPKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             --CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             --CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence              3456788999999999999999999999999875

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=6.2e-34  Score=222.45  Aligned_cols=177  Identities=16%  Similarity=0.250  Sum_probs=150.5

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+.+|+|.+++....               .+++..+..++.|++.||.|||+.|++|+||+|.||+++.++.++
T Consensus       100 ~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~k  164 (298)
T 1phk_A          100 FLVFDLMKKGELFDYLTEKV---------------TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIK  164 (298)
T ss_dssp             EEEEECCTTCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred             EEEEeccCCCcHHHHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEE
Confidence            37899999999999998653               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccc------cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF------DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~------~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      ++|||++.......  ......++..|+|||.+.      ...++.++|+||+|+++++|+ +|..||...........+
T Consensus       165 l~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~~~~~~~~  241 (298)
T 1phk_A          165 LTDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL-AGSPPFWHRKQMLMLRMI  241 (298)
T ss_dssp             ECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHH
T ss_pred             EecccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHH-HCCCCCcCccHHHHHHHH
Confidence            99999987543322  223456788999999874      345788999999999999999 799999988887777777


Q ss_pred             HhCcccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .........+  ..++..+.+++.+||+.||.+||++++++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (298)
T 1phk_A          242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  284 (298)
T ss_dssp             HHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             hcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence            6654443322  3578899999999999999999999999864

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.3e-34  Score=228.42  Aligned_cols=194  Identities=20%  Similarity=0.282  Sum_probs=148.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhcccc-------------------------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKD-------------------------KSGSGKPRVRSLSTSQAVTMAYQVALGLEH   72 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~-------------------------~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~   72 (223)
                      .+||||+.+|+|.+++.........                         ..+........+++..+..++.|+++||.|
T Consensus       104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~  183 (345)
T 3hko_A          104 CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHY  183 (345)
T ss_dssp             EEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHH
Confidence            4889999999999999532110000                         000000012245788899999999999999


Q ss_pred             hhcCCcccCCCCCCCeeeecCC--CeEEcCCCCCcccchhh---hhhhhcCCccccccccccccc--CCCCcccchHHHH
Q psy15108         73 ISDKRLIHKDIAARNCLISSDL--SVKISLSGLSKDTYQKE---YYKYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYA  145 (223)
Q Consensus        73 LH~~~i~H~di~~~nil~~~~~--~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG  145 (223)
                      ||+.+++|+||||.||+++.++  .++|+|||++.......   ........+++.|+|||.+..  ..++.++||||||
T Consensus       184 LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG  263 (345)
T 3hko_A          184 LHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG  263 (345)
T ss_dssp             HHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHH
T ss_pred             HHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHH
Confidence            9999999999999999998766  79999999997543321   222345678899999999865  5688999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       146 ~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +++|+|+ +|..||.+.........+.........+  ..+++++.+++.+||+.||.+||++.+++++
T Consensus       264 ~il~el~-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h  331 (345)
T 3hko_A          264 VLLHLLL-MGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH  331 (345)
T ss_dssp             HHHHHHH-HSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred             HHHHHHH-HCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            9999999 7999999998888887777665443332  2478899999999999999999999999886

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=5.6e-34  Score=221.80  Aligned_cols=180  Identities=18%  Similarity=0.239  Sum_probs=137.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~~~   96 (223)
                      .+|+||+. |+|.++++....           ....+++..++.++.|++.||.|||++ |++|+||||.||+++.++.+
T Consensus        82 ~lv~e~~~-~~l~~~l~~~~~-----------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~  149 (290)
T 3fme_A           82 WICMELMD-TSLDKFYKQVID-----------KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQV  149 (290)
T ss_dssp             EEEEECCS-EEHHHHHHHHHH-----------TTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCE
T ss_pred             EEEEehhc-cchHHHHHHHHh-----------cCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCE
Confidence            37889987 599998876433           235699999999999999999999998 99999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccc----ccCCCCcccchHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAV----FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL-SDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~----~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~-~~~~~~~~~  171 (223)
                      +++|||++.......  ......+++.|+|||.+    ....++.++|+||+|+++++|+ +|..||... .........
T Consensus       150 kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~  226 (290)
T 3fme_A          150 KMCDFGISGYLVDDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA-ILRFPYDSWGTPFQQLKQV  226 (290)
T ss_dssp             EBCCC-----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHH-HTSCSSCCCSCHHHHHHHH
T ss_pred             EEeecCCcccccccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHH-HCCCCccccCchHHHHHHH
Confidence            999999987554332  22334678889999996    4556889999999999999999 799999863 344444444


Q ss_pred             HhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ............+++++.+++.+||+.||++|||++++++|
T Consensus       227 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          227 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             HHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             hccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence            44433333345688999999999999999999999999875

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=7.1e-34  Score=221.70  Aligned_cols=179  Identities=20%  Similarity=0.271  Sum_probs=140.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+ +|.+++...+              +.+++..+..++.|+++||.|||+.|++||||||+||+++.++.++
T Consensus        77 ~lv~e~~~~-~l~~~~~~~~--------------~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~k  141 (292)
T 3o0g_A           77 TLVFEFCDQ-DLKKYFDSCN--------------GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELK  141 (292)
T ss_dssp             EEEEECCSE-EHHHHHHHTT--------------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             EEEEecCCC-CHHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence            378899875 6666665533              3599999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++....... .......++..|+|||.+.+.. ++.++|+||+|+++++|++.+..+|.+.+.......+.....
T Consensus       142 l~Dfg~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~  220 (292)
T 3o0g_A          142 LANFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG  220 (292)
T ss_dssp             ECCCTTCEECCSCC-SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHC
T ss_pred             EeecccceecCCcc-ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhC
Confidence            99999997543221 1223456788999999987765 799999999999999999444444666666665555433110


Q ss_pred             c---------------------------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 C---------------------------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~---------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                           ......+++++.+++.+||+.||++|||++|+++|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          221 TPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            0                           01123467889999999999999999999999875

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=7.6e-34  Score=221.67  Aligned_cols=176  Identities=19%  Similarity=0.303  Sum_probs=151.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+.+++|.+++...+               .+++..++.++.|+++||.|||+.|++|+||+|+||+++.++.++
T Consensus        91 ~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~k  155 (294)
T 2rku_A           91 FVVLELCRRRSLLELHKRRK---------------ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVK  155 (294)
T ss_dssp             EEEEECCTTCBHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred             EEEEecCCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEE
Confidence            48899999999999998654               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++....... .......++..|+|||.+.+..++.++|+||+|+++++|+ +|..||......+....+....  
T Consensus       156 l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~~~~~~~~~~~~--  231 (294)
T 2rku_A          156 IGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKETYLRIKKNE--  231 (294)
T ss_dssp             ECCCTTCEECCSTT-CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHHHTTC--
T ss_pred             EEeccCceecccCc-cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHhhcc--
Confidence            99999987543221 1123456788899999998888899999999999999999 7999999888777766665543  


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+..++..+.+++.+||+.||++||++++++++
T Consensus       232 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          232 YSIPKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            33456788999999999999999999999999876

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=9.7e-34  Score=237.06  Aligned_cols=180  Identities=18%  Similarity=0.280  Sum_probs=149.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+|+|.+++...+.           ....+++..+..++.||+.||.|||+.|++||||||.||+++.++.++
T Consensus       261 ~lVmE~~~gg~L~~~l~~~~~-----------~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vk  329 (543)
T 3c4z_A          261 CLVMTIMNGGDIRYHIYNVDE-----------DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVR  329 (543)
T ss_dssp             EEEECCCTTCBHHHHHHTSST-----------TSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEE
T ss_pred             EEEEEeccCCCHHHHHHHhhc-----------ccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEE
Confidence            388999999999999986432           224699999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHHHh
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS----DDQVLSQLES  173 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~----~~~~~~~~~~  173 (223)
                      |+|||++........ ......+++.|+|||.+.+..++.++|+||+||++|+|+ +|..||.+..    ..++...+..
T Consensus       330 L~DFGla~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyell-tG~~PF~~~~~~~~~~~~~~~i~~  407 (543)
T 3c4z_A          330 ISDLGLAVELKAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI-AARGPFRARGEKVENKELKQRVLE  407 (543)
T ss_dssp             ECCCTTCEECCTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCCTTCCCCHHHHHHHHHH
T ss_pred             EeecceeeeccCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHH-hCCCCCCCCccchhHHHHHHHHhh
Confidence            999999976433221 123347899999999999888999999999999999999 7999997653    3455555554


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF-----PSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~ll~~  212 (223)
                      ..  ...+..++.++.+++.+||+.||.+||++     +++++|
T Consensus       408 ~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H  449 (543)
T 3c4z_A          408 QA--VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH  449 (543)
T ss_dssp             CC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred             cc--cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence            43  33456789999999999999999999975     666654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.3e-33  Score=231.35  Aligned_cols=175  Identities=15%  Similarity=0.168  Sum_probs=143.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC--e
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--V   96 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~--~   96 (223)
                      +|+||+. ++|.+++.....             ..+++..+..++.||++||.|||+.+++||||||.||+++.++.  +
T Consensus       176 lv~e~~~-~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~v  241 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKKNKF-------------QGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGI  241 (429)
T ss_dssp             EEECCCC-CBHHHHHHHTTT-------------CCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCE
T ss_pred             EEEeccC-CCHHHHHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcce
Confidence            6788885 799999987654             45999999999999999999999999999999999999998877  9


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +|+|||++......    .....+++.|+|||.+.+..++.++|||||||++|+|+ +|..||.+.+....+..+.....
T Consensus       242 kL~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-tG~~pf~~~~~~~~l~~i~~~~~  316 (429)
T 3kvw_A          242 KVIDFGSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQLACMIELLG  316 (429)
T ss_dssp             EECCCTTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             EEeecccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHcC
Confidence            99999998643322    23457788999999999989999999999999999999 79999998887666554432100


Q ss_pred             cC-------------------------------------------------C--------CCCCChHHHHHHHHHhcCCC
Q psy15108        177 CW-------------------------------------------------K--------HSSKTPEYITSLHEKCIHPH  199 (223)
Q Consensus       177 ~~-------------------------------------------------~--------~~~~~~~~~~~li~~~l~~d  199 (223)
                      .+                                                 +        .....++.+.+|+.+||+.|
T Consensus       317 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~d  396 (429)
T 3kvw_A          317 MPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWD  396 (429)
T ss_dssp             CCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSS
T ss_pred             CCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCC
Confidence            00                                                 0        01123677899999999999


Q ss_pred             CCCCCCHHHHHHH
Q psy15108        200 PHQRPTFPSIVTQ  212 (223)
Q Consensus       200 p~~Rps~~~ll~~  212 (223)
                      |++|||++|+++|
T Consensus       397 P~~Rpta~e~L~H  409 (429)
T 3kvw_A          397 PAVRMTPGQALRH  409 (429)
T ss_dssp             TTTSCCHHHHHTS
T ss_pred             hhhCCCHHHHhCC
Confidence            9999999999975

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=7.6e-34  Score=221.17  Aligned_cols=179  Identities=23%  Similarity=0.319  Sum_probs=141.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+ +|.+++....              ..+++..+..++.|+++||.|||+.|++||||||+||+++.++.+
T Consensus        75 ~~lv~e~~~~-~l~~~~~~~~--------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  139 (288)
T 1ob3_A           75 LVLVFEHLDQ-DLKKLLDVCE--------------GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL  139 (288)
T ss_dssp             EEEEEECCSE-EHHHHHHTST--------------TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCE
T ss_pred             EEEEEEecCC-CHHHHHHhcc--------------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCE
Confidence            3478888875 9999997643              358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .......++..|+|||.+.+. .++.++|+||+|+++|+|+ +|..||.+.........+....
T Consensus       140 kl~Dfg~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~  217 (288)
T 1ob3_A          140 KIADFGLARAFGIPV-RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV-NGTPLFPGVSEADQLMRIFRIL  217 (288)
T ss_dssp             EECCTTHHHHHCC----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHH
T ss_pred             EEeECccccccCccc-cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHH
Confidence            999999886543221 122334678899999998754 4889999999999999999 7999999887766655543210


Q ss_pred             cc-----C----------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LC-----W----------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~-----~----------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..     +                      .....+++++.+++.+||+.||++|||++++++|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          218 GTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             CCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            00     0                      0123468899999999999999999999999875

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=6.2e-34  Score=223.09  Aligned_cols=177  Identities=20%  Similarity=0.284  Sum_probs=152.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+.+++|.++++.                .++++..+..++.|++.||.|||+.|++|+||+|.||+++.++.++
T Consensus        96 ~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~k  159 (303)
T 3a7i_A           96 WIIMEYLGGGSALDLLEP----------------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK  159 (303)
T ss_dssp             EEEEECCTTEEHHHHHTT----------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             EEEEEeCCCCcHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEE
Confidence            378999999999999953                3589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++....... .......++..|+|||.+.+..++.++|+||||+++++|+ +|..||...........+... ..
T Consensus       160 l~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~-~~  236 (303)
T 3a7i_A          160 LADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA-RGEPPHSELHPMKVLFLIPKN-NP  236 (303)
T ss_dssp             ECCCTTCEECBTTB-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCHHHHHHHHHHS-CC
T ss_pred             EeecccceecCccc-cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHc-cCCCCCCCcCHHHHHHHhhcC-CC
Confidence            99999987554322 1123456788899999998888999999999999999999 799999988877776666554 33


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      ...+..++..+.+++.+||+.||.+||++.+++++.
T Consensus       237 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~  272 (303)
T 3a7i_A          237 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK  272 (303)
T ss_dssp             CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred             CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence            444567899999999999999999999999998763

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=7.5e-34  Score=223.89  Aligned_cols=187  Identities=18%  Similarity=0.263  Sum_probs=147.7

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|+||+.+|+|.+++.....           ....+++..++.++.|+++||.|||+.+++|+||+|.||+++.++.+++
T Consensus       107 lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl  175 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKD-----------KGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVL  175 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHT-----------TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             EEEEeCCCCcHHHHHHHHHh-----------cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEE
Confidence            78999999999999987533           2346999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchh--------hhhhhhcCCcccccccccccccCC---CCcccchHHHHHHHHHHHhCCCCCCCCCCH--H
Q psy15108         99 SLSGLSKDTYQK--------EYYKYRNAILPLRWLPYEAVFDDE---FSTKSDVYAYACLIWEIFNKGEMPFPDLSD--D  165 (223)
Q Consensus        99 ~df~~~~~~~~~--------~~~~~~~~~~~~~~~~pe~~~~~~---~~~~~Di~slG~il~~l~~~~~~p~~~~~~--~  165 (223)
                      +|||++......        .........++..|+|||.+....   ++.++||||||+++|+|+ +|..||.....  .
T Consensus       176 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~~~~  254 (317)
T 2buj_A          176 MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM-FGEGPYDMVFQKGD  254 (317)
T ss_dssp             CCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHH-HSSCTTHHHHHTTS
T ss_pred             EecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHH-hCCCChhhhhcccc
Confidence            999987653211        011122345688899999987544   688999999999999999 79999853211  1


Q ss_pred             HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      .....+.. ....+....++.++.+++.+||+.||.+||++++++++|+.+..
T Consensus       255 ~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          255 SVALAVQN-QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             CHHHHHHC-C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             hhhHHhhc-cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            11122222 24444456788999999999999999999999999999988754

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=4.1e-33  Score=220.38  Aligned_cols=178  Identities=21%  Similarity=0.328  Sum_probs=148.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+. |+|.+++.....             ..+++..+..++.|++.||.|||+.|++|+||+|.||+++.++.++
T Consensus        95 ~lv~e~~~-~~L~~~l~~~~~-------------~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~k  160 (326)
T 1blx_A           95 TLVFEHVD-QDLTTYLDKVPE-------------PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK  160 (326)
T ss_dssp             EEEEECCS-CBHHHHHHHSCT-------------TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred             EEEEecCC-CCHHHHHHhccc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEE
Confidence            37788887 799999987543             4589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc-
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL-  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~-  176 (223)
                      ++|||++.......  ......++..|+|||.+.+..++.++||||||+++|+|+ +|..||.+.........+..... 
T Consensus       161 l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~i~~~~~~  237 (326)
T 1blx_A          161 LADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKPLFRGSSDVDQLGKILDVIGL  237 (326)
T ss_dssp             ECSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             EecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHH-cCCCCCCCCCHHHHHHHHHHHcCC
Confidence            99999987654332  234466788999999998888999999999999999999 79999998887766655543100 


Q ss_pred             ----cC--------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 ----CW--------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ----~~--------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                          .+                    .....++..+.+++.+||+.||.+||++.++++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                00                    1124578899999999999999999999999865

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.2e-34  Score=222.99  Aligned_cols=177  Identities=16%  Similarity=0.272  Sum_probs=126.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+.+++|.+++....              .++++..++.++.|+++||.|||+.|++|+||+|.||+++.++.++
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~k  152 (278)
T 3cok_A           87 YLVLEMCHNGEMNRYLKNRV--------------KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIK  152 (278)
T ss_dssp             EEEEECCTTEEHHHHHHTCS--------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEE
T ss_pred             EEEEecCCCCcHHHHHhhcc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEE
Confidence            38899999999999998642              3689999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++........ ......++..|+|||.+.+..++.++|+||+|+++++|+ +|..||...........+...  .
T Consensus       153 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~--~  228 (278)
T 3cok_A          153 IADFGLATQLKMPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLL-IGRPPFDTDTVKNTLNKVVLA--D  228 (278)
T ss_dssp             ECCCTTCEECC-----------------------------CTHHHHHHHHHHHHH-HSSCSSCCCSCC-----CCSS--C
T ss_pred             EEeecceeeccCCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHH-hCCCCCCChhHHHHHHHHhhc--c
Confidence            999999875432221 122345788899999998888899999999999999999 799999876655444433322  2


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+..++.++.+++.+||+.||++||++++++++
T Consensus       229 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          229 YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH  263 (278)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence            23455678999999999999999999999999875

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=9e-34  Score=224.95  Aligned_cols=176  Identities=16%  Similarity=0.208  Sum_probs=143.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec-----
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-----   92 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~-----   92 (223)
                      .+||||+ +++|.+++...+.             .++++..+..++.|+++||.|||+.|++||||||.||+++.     
T Consensus        93 ~lv~e~~-~~~l~~~l~~~~~-------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~  158 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKENGF-------------LPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTE  158 (339)
T ss_dssp             EEEEECC-CCBHHHHHHHTTT-------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEE
T ss_pred             EEEEcCC-CCCHHHHHHhcCC-------------CCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEecccccc
Confidence            3788999 9999999987643             46899999999999999999999999999999999999987     


Q ss_pred             --------------CCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCC
Q psy15108         93 --------------DLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMP  158 (223)
Q Consensus        93 --------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p  158 (223)
                                    ++.++++|||++......    .....++..|+|||.+.+..++.++||||+|+++|+++ +|..|
T Consensus       159 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~p  233 (339)
T 1z57_A          159 AYNPKIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYY-LGFTV  233 (339)
T ss_dssp             EEC----CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHH-HSSCS
T ss_pred             ccCCccccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHH-hCCCC
Confidence                          567999999998753322    23456789999999999888999999999999999999 79999


Q ss_pred             CCCCCHHHHHHHHHhCccc------------------------------------------CCCCCCChHHHHHHHHHhc
Q psy15108        159 FPDLSDDQVLSQLESKKLC------------------------------------------WKHSSKTPEYITSLHEKCI  196 (223)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~li~~~l  196 (223)
                      |...+..+....+......                                          .......++++.+++.+||
T Consensus       234 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  313 (339)
T 1z57_A          234 FPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKML  313 (339)
T ss_dssp             CCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHT
T ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHh
Confidence            9888766554433221000                                          0011223577899999999


Q ss_pred             CCCCCCCCCHHHHHHH
Q psy15108        197 HPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       197 ~~dp~~Rps~~~ll~~  212 (223)
                      +.||.+|||++|++++
T Consensus       314 ~~dP~~Rpt~~ell~h  329 (339)
T 1z57_A          314 EYDPAKRITLREALKH  329 (339)
T ss_dssp             CSSTTTSCCHHHHTTS
T ss_pred             CcCcccccCHHHHhcC
Confidence            9999999999999876

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.3e-33  Score=228.30  Aligned_cols=180  Identities=17%  Similarity=0.174  Sum_probs=145.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee-cCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~-~~~~~   96 (223)
                      .+||||+. |+|.+.++....           ....+++..+..++.||++||.|||+.|++||||||+||+++ .++.+
T Consensus       114 ~lv~e~~~-~~L~~~l~~~~~-----------~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~  181 (383)
T 3eb0_A          114 NVIMEYVP-DTLHKVLKSFIR-----------SGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTL  181 (383)
T ss_dssp             EEEECCCS-EEHHHHHHHHHH-----------TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEE
T ss_pred             EEEEecCC-ccHHHHHHHHHh-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcE
Confidence            37899998 588888876433           235699999999999999999999999999999999999998 57889


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++.......  ......++..|+|||.+.+.. ++.++||||+||++|+|+ +|..||.+.........+....
T Consensus       182 kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~~~~i~~~~  258 (383)
T 3eb0_A          182 KLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI-LGKPLFSGETSIDQLVRIIQIM  258 (383)
T ss_dssp             EECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHHH
T ss_pred             EEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHh
Confidence            999999997543332  223456788899999987654 899999999999999999 7999999887766555543210


Q ss_pred             c---------------------------cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 L---------------------------CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~---------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                           ....+...++++.+++.+||+.||.+|||+.|+++|
T Consensus       259 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (383)
T 3eb0_A          259 GTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAH  322 (383)
T ss_dssp             CCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             CCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0                           001234578889999999999999999999999865

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.5e-33  Score=222.46  Aligned_cols=184  Identities=16%  Similarity=0.250  Sum_probs=146.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+. |+|.+++......         .....+++..+..++.||++||.|||+.|++||||||+||+++.++.+
T Consensus        78 ~~lv~e~~~-~~L~~~l~~~~~~---------~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~  147 (317)
T 2pmi_A           78 LTLVFEFMD-NDLKKYMDSRTVG---------NTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQL  147 (317)
T ss_dssp             EEEEEECCC-CBHHHHHHHHHSS---------SCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCE
T ss_pred             EEEEEEecC-CCHHHHHHhcccc---------ccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCE
Confidence            347889998 6999999876431         112358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .......++..|+|||.+.+. .++.++||||+||++|+|+ +|..||.+....+....+....
T Consensus       148 kl~Dfg~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~~i~~~~  225 (317)
T 2pmi_A          148 KLGDFGLARAFGIPV-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMI-TGKPLFPGTNDEEQLKLIFDIM  225 (317)
T ss_dssp             EECCCSSCEETTSCC-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHH
T ss_pred             EECcCccceecCCCc-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHh
Confidence            999999987543221 112345678899999998764 5899999999999999999 7999999888776666553310


Q ss_pred             c--------------------------------cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 L--------------------------------CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~--------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                                ........+.++.+++.+||+.||++|||+++++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          226 GTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             CSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence            0                                001122567889999999999999999999999875

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.6e-33  Score=225.23  Aligned_cols=173  Identities=17%  Similarity=0.238  Sum_probs=144.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+ +++|.++++.                ..+++..+..++.||++||.|||+.|++||||||.||+++.++.++
T Consensus       106 ~lv~e~~-~~~L~~~~~~----------------~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k  168 (367)
T 1cm8_A          106 YLVMPFM-GTDLGKLMKH----------------EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELK  168 (367)
T ss_dssp             EEEEECC-SEEHHHHHHH----------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred             EEEEecC-CCCHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEE
Confidence            4778888 8999999975                2489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||+++.....    .....++..|+|||.+.+ ..++.++|+||+||++++|+ +|..||.+.+....+..+.....
T Consensus       169 l~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~l~~i~~~~g  243 (367)
T 1cm8_A          169 ILDFGLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI-TGKTLFKGSDHLDQLKEIMKVTG  243 (367)
T ss_dssp             ECCCTTCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             EEeeecccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHhcC
Confidence            9999999754322    234567899999999876 67899999999999999999 79999998877665554432100


Q ss_pred             c-----------------------------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 C-----------------------------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~-----------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                             .......++.+.+++.+||+.||.+|||++++++|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          244 TPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             CCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence            0                             01124568889999999999999999999999986

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=4.5e-34  Score=224.20  Aligned_cols=187  Identities=21%  Similarity=0.288  Sum_probs=146.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+++|+|.+++.....            ..++++..++.++.|+++||.|||+.|++|+||+|.||+++.++.+
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~------------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~  172 (307)
T 2nru_A          105 LCLVYVYMPNGSLLDRLSCLDG------------TPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTA  172 (307)
T ss_dssp             CEEEEECCTTCBHHHHHHTGGG------------CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCE
T ss_pred             eEEEEEecCCCcHHHHHHhccC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcE
Confidence            4488999999999999986433            2468999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHH
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ----VLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~----~~~~~  171 (223)
                      +++|||++....... ........++..|+|||.+.+ .++.++|+||||+++|+|+ +|..||.......    ....+
T Consensus       173 kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~  250 (307)
T 2nru_A          173 KISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEII-TGLPAVDEHREPQLLLDIKEEI  250 (307)
T ss_dssp             EECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHH-HCCCSBCTTBSSSBTTHHHHHH
T ss_pred             EEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHH-HCCCCcccCcchHHHHHHHHHh
Confidence            999999987543221 111233467889999998754 4788999999999999999 7999997654322    22222


Q ss_pred             HhCc---------ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy15108        172 ESKK---------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       172 ~~~~---------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~  217 (223)
                      ....         .....+...++.+.+++.+||+.||.+||++++++++|+++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          251 EDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             hhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            1110         011112334677899999999999999999999999999875

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=9.6e-34  Score=222.70  Aligned_cols=178  Identities=16%  Similarity=0.208  Sum_probs=140.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+.+++|.++++..+               .+++..+..++.|+++||.|||+.|++|+||||.||+++.++.++
T Consensus        78 ~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~k  142 (311)
T 4agu_A           78 HLVFEYCDHTVLHELDRYQR---------------GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIK  142 (311)
T ss_dssp             EEEEECCSEEHHHHHHHTSS---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             EEEEEeCCCchHHHHHhhhc---------------CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEE
Confidence            47899999999999987543               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++....... .......++..|+|||.+.+ ..++.++|+||+|+++++++ +|..||.+.........+.....
T Consensus       143 l~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~  220 (311)
T 4agu_A          143 LCDFGFARLLTGPS-DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL-SGVPLWPGKSDVDQLYLIRKTLG  220 (311)
T ss_dssp             ECCCTTCEECC-------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             EeeCCCchhccCcc-cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHhc
Confidence            99999997544322 12234567888999999875 56799999999999999999 79999998877665544332100


Q ss_pred             -------------------cCCC----------CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 -------------------CWKH----------SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 -------------------~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                         ..+.          ...++.++.+++.+||+.||.+|||++++++|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          221 DLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             SCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence                               0000          13567889999999999999999999999875

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2e-33  Score=221.22  Aligned_cols=179  Identities=17%  Similarity=0.274  Sum_probs=149.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+.+|+|.+++...+              ..+++..+..++.|++.||.|||+.|++|+||+|.||+++.++.++
T Consensus       100 ~lv~e~~~~~~L~~~~~~~~--------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~k  165 (314)
T 3com_A          100 WIVMEYCGAGSVSDIIRLRN--------------KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAK  165 (314)
T ss_dssp             EEEEECCTTEEHHHHHHHHT--------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred             EEEeecCCCCCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEE
Confidence            47899999999999998543              3699999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc-
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL-  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~-  176 (223)
                      ++|||++....... .......++..|+|||.+.+..++.++|+||||+++|+|+ +|..||...........+..... 
T Consensus       166 l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~~  243 (314)
T 3com_A          166 LADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMA-EGKPPYADIHPMRAIFMIPTNPPP  243 (314)
T ss_dssp             ECCCTTCEECBTTB-SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHH-HSSCTTTTSCHHHHHHHHHHSCCC
T ss_pred             Eeecccchhhhhhc-cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHhcCCCc
Confidence            99999987543321 1223456788899999998888999999999999999999 79999988877665555444322 


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+..++..+.+++.+||+.||.+||++.+++++
T Consensus       244 ~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          244 TFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             CCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            222344578899999999999999999999999875

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=3.8e-34  Score=221.26  Aligned_cols=178  Identities=21%  Similarity=0.220  Sum_probs=144.5

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|+||+.+|+|.+++...               ..+++..+..++.|+++||.|||+.|++|+||+|.||+++.++.+++
T Consensus        82 lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  146 (276)
T 2yex_A           82 LFLEYCSGGELFDRIEPD---------------IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKI  146 (276)
T ss_dssp             EEEECCTTEEGGGGSBTT---------------TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             EEEEecCCCcHHHHHhhc---------------cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEE
Confidence            789999999999998643               34999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhh-hhhhhcCCcccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhCc
Q psy15108         99 SLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKK  175 (223)
Q Consensus        99 ~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~~~~~~~  175 (223)
                      +|||.+....... ........++..|+|||.+.+..+ +.++|+||+|+++++++ +|..||...... ..........
T Consensus       147 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~  225 (276)
T 2yex_A          147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKK  225 (276)
T ss_dssp             CCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHH-HSSCCCSCSCTTSHHHHHHHTTC
T ss_pred             eeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHH-hCCCCCCCCchHHHHHHHhhhcc
Confidence            9999987543222 111234567888999999987665 67899999999999999 799999876543 2333333332


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ........++..+.+++.+||+.||.+||++++++++
T Consensus       226 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          226 TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence            2233334678999999999999999999999999875

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=2.6e-33  Score=217.57  Aligned_cols=174  Identities=20%  Similarity=0.193  Sum_probs=140.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC----
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD----   93 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~----   93 (223)
                      .+|+||+++|+|.+++.....           ....+++..++.++.|+++||.|||++|++|+||||+||+++.+    
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~  155 (289)
T 1x8b_A           87 LIQNEYCNGGSLADAISENYR-----------IMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPN  155 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHHHH-----------HTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------
T ss_pred             EEEEEecCCCcHHHHHHhhcc-----------cccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCc
Confidence            378999999999999987643           22458999999999999999999999999999999999999843    


Q ss_pred             ---------------CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCC
Q psy15108         94 ---------------LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEM  157 (223)
Q Consensus        94 ---------------~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~  157 (223)
                                     ..++++|||.+......     ....++..|+|||.+.+. .++.++||||||+++++++ ++..
T Consensus       156 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~~~~  229 (289)
T 1x8b_A          156 AASEEGDEDDWASNKVMFKIGDLGHVTRISSP-----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAA-GAEP  229 (289)
T ss_dssp             --------------CCCEEECCCTTCEETTCS-----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHT-TCCC
T ss_pred             ccccccccccccCCceEEEEcccccccccCCc-----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHh-cCCC
Confidence                           47899999998754332     234578899999998765 4567999999999999998 6765


Q ss_pred             CCCCCCHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        158 PFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       158 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ++....   ....+... .....+..+++++.+++.+||+.||.+||++.++++|
T Consensus       230 ~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          230 LPRNGD---QWHEIRQG-RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             CCSSSH---HHHHHHTT-CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             CCcchh---HHHHHHcC-CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence            554332   23333343 3344566789999999999999999999999999875

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.2e-33  Score=223.64  Aligned_cols=179  Identities=18%  Similarity=0.269  Sum_probs=141.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+. |+|.+++...+.              .+++..+..++.|++.||.|||+.|++||||||.||+++.++.+
T Consensus        75 ~~lv~e~~~-~~l~~~~~~~~~--------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~  139 (324)
T 3mtl_A           75 LTLVFEYLD-KDLKQYLDDCGN--------------IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGEL  139 (324)
T ss_dssp             EEEEEECCS-EEHHHHHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCE
T ss_pred             EEEEecccc-cCHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCE
Confidence            347889987 699999987543              58999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .......++..|+|||.+.+ ..++.++||||+|+++|+|+ +|..||.+....+....+....
T Consensus       140 kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~~~~~~~i~~~~  217 (324)
T 3mtl_A          140 KLADFGLARAKSIPT-KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMA-TGRPLFPGSTVEEQLHFIFRIL  217 (324)
T ss_dssp             EECSSSEEECC-------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHH
T ss_pred             EEccCcccccccCCc-cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHh
Confidence            999999987543222 12234567889999999876 56899999999999999999 7999999888776666554311


Q ss_pred             ccC----------------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCW----------------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~----------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..+                            .....+++++.+++.+||+.||.+|||++|+++|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          218 GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH  282 (324)
T ss_dssp             CCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            100                            0012457889999999999999999999999875

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=3e-33  Score=224.68  Aligned_cols=187  Identities=11%  Similarity=0.113  Sum_probs=147.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec----
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS----   92 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~----   92 (223)
                      ..+||||+.+|+|.++++..+.          .....+++..++.++.||+.||.|||+.|++||||||+||+++.    
T Consensus       142 ~~lv~e~~~~g~L~~~l~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~  211 (365)
T 3e7e_A          142 SVLVGELYSYGTLLNAINLYKN----------TPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLE  211 (365)
T ss_dssp             EEEEECCCCSCBHHHHHHHHHT----------STTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTC
T ss_pred             cEEEEeccCCCcHHHHHHHhhc----------ccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccC
Confidence            3489999999999999986543          12346999999999999999999999999999999999999998    


Q ss_pred             -------CCCeEEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH
Q psy15108         93 -------DLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD  164 (223)
Q Consensus        93 -------~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~  164 (223)
                             .+.++|+|||+++...... ........++..|+|||.+.+..++.++|||||||++|+|+ +|..||.....
T Consensus       212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-tg~~pf~~~~~  290 (365)
T 3e7e_A          212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCML-FGTYMKVKNEG  290 (365)
T ss_dssp             C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHH-HSSCCCEEEET
T ss_pred             ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHH-hCCCccccCCC
Confidence                   8999999999996543211 11234567899999999999988999999999999999999 78888854322


Q ss_pred             HHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCC-CCHHHHHHHHHHHhhhc
Q psy15108        165 DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR-PTFPSIVTQLSDAMCND  220 (223)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R-ps~~~ll~~L~~~~~~~  220 (223)
                      ...      ...........++.+.+++..|++.+|.+| |+++++.+.|++.+...
T Consensus       291 ~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~  341 (365)
T 3e7e_A          291 GEC------KPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH  341 (365)
T ss_dssp             TEE------EECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             Cce------eechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence            100      000011112347788999999999999998 57888888888877653

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=3.9e-34  Score=227.50  Aligned_cols=178  Identities=13%  Similarity=0.230  Sum_probs=123.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC---C
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD---L   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~---~   94 (223)
                      .+||||+.+|+|.+++...+.             ..+++..++.++.|++.||.|||+.|++|+||||.||+++.+   +
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~~-------------~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~  168 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERGD-------------QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDA  168 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-C-------------CCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTC
T ss_pred             EEEEeccCCCCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCc
Confidence            478999999999999986533             469999999999999999999999999999999999999764   4


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHH----H
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS----Q  170 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~----~  170 (223)
                      .++++|||++.......   .....+++.|+|||.+....++.++||||+|+++|+|+ +|..||..........    .
T Consensus       169 ~~kl~Dfg~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~~~~~  244 (336)
T 3fhr_A          169 VLKLTDFGFAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL-CGFPPFYSNTGQAISPGMKRR  244 (336)
T ss_dssp             CEEECCCTTCEEC-------------------------CHHHHHHHHHHHHHHHHHHH-HSSCCC---------------
T ss_pred             eEEEeccccceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHH-HCCCCCCCccchhhhhhHHHh
Confidence            59999999987544322   23456688899999998888889999999999999999 7999997665443321    1


Q ss_pred             HHhCcc--cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        171 LESKKL--CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       171 ~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +.....  ..+....+++++.+++.+||+.||.+|||+++++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          245 IRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             ------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             hhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            211111  122235678999999999999999999999999985

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.1e-33  Score=224.85  Aligned_cols=169  Identities=18%  Similarity=0.261  Sum_probs=141.7

Q ss_pred             CCCCCCCCCC-ChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         18 SGSGKPRVKG-DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .+|+||+.+| +|.+++...+               .+++..+..++.|++.||.|||+.|++||||||.||+++.++.+
T Consensus       105 ~lv~e~~~~g~~l~~~~~~~~---------------~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~  169 (335)
T 3dls_A          105 QLVMEKHGSGLDLFAFIDRHP---------------RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTI  169 (335)
T ss_dssp             EEEEECCTTSCBHHHHHHTCC---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCE
T ss_pred             EEEEEeCCCCccHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcE
Confidence            3789999777 9999998643               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++.......  ......+++.|+|||.+.+..+ +.++||||+|+++|+|+ +|..||......      ..  
T Consensus       170 kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~------~~--  238 (335)
T 3dls_A          170 KLIDFGSAAYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV-FEENPFCELEET------VE--  238 (335)
T ss_dssp             EECCCTTCEECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHH-HSSCSCSSGGGG------TT--
T ss_pred             EEeecccceECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHH-hCCCchhhHHHH------Hh--
Confidence            999999987554332  1234567899999999987776 78899999999999999 799999763321      11  


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+..+++++.+++.+||+.||++||++++++++
T Consensus       239 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          239 AAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             TCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             hccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1223345678999999999999999999999999986

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.6e-33  Score=220.58  Aligned_cols=180  Identities=19%  Similarity=0.271  Sum_probs=146.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++.....              .+++..+..++.|+++||.|||+.|++|+||+|.||+++.++.+
T Consensus        91 ~~lv~e~~~~~~l~~~~~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  156 (302)
T 2j7t_A           91 LWIMIEFCPGGAVDAIMLELDR--------------GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDI  156 (302)
T ss_dssp             EEEEEECCTTEEHHHHHHHHTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCE
T ss_pred             EEEEEEeCCCCcHHHHHHhhcc--------------CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCE
Confidence            3478999999999999986533              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccc-----ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAV-----FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~-----~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||++...... ........++..|+|||.+     ....++.++|+||||+++|+|+ +|..||...+.......+
T Consensus       157 kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~  234 (302)
T 2j7t_A          157 RLADFGVSAKNLKT-LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA-QIEPPHHELNPMRVLLKI  234 (302)
T ss_dssp             EECCCHHHHHHHHH-HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHH-HSSCTTTTSCHHHHHHHH
T ss_pred             EEEECCCCcccccc-ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHh-cCCCCCccCCHHHHHHHH
Confidence            99999987533221 1122345678899999997     3566889999999999999999 799999988877766665


Q ss_pred             HhCccc-CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKLC-WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...... ...+..++.++.+++.+||+.||.+||+++++++|
T Consensus       235 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          235 AKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             HHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             hccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            554322 23345678899999999999999999999999864

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.1e-33  Score=222.83  Aligned_cols=182  Identities=19%  Similarity=0.285  Sum_probs=129.7

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCCCCCeeeecCCCe
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~~~nil~~~~~~~   96 (223)
                      +++||+. |+|.++++....            ...+++..++.++.||+.||.|||+.+  ++|+||||.||+++.++.+
T Consensus       111 lv~e~~~-g~L~~~l~~~~~------------~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~  177 (337)
T 3ll6_A          111 LLTELCK-GQLVEFLKKMES------------RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTI  177 (337)
T ss_dssp             EEEECCS-EEHHHHHHHHHT------------TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCE
T ss_pred             EEEEecC-CCHHHHHHHhhc------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCE
Confidence            6677775 899999986432            246999999999999999999999999  9999999999999999999


Q ss_pred             EEcCCCCCcccchhhhh-----------hhhcCCccccccccccc---ccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Q psy15108         97 KISLSGLSKDTYQKEYY-----------KYRNAILPLRWLPYEAV---FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL  162 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~-----------~~~~~~~~~~~~~pe~~---~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~  162 (223)
                      +|+|||++.........           ......++..|+|||.+   ....++.++||||||+++|+|+ +|..||...
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~-~g~~p~~~~  256 (337)
T 3ll6_A          178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC-FRQHPFEDG  256 (337)
T ss_dssp             EBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHH-HSSCCC---
T ss_pred             EEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHH-hCCCCCcch
Confidence            99999998765432110           11234578889999998   4566888999999999999999 799999765


Q ss_pred             CHHHHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        163 SDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      .......    .....+.....+..+.+++.+||+.||.+||++.+++++|+.+..
T Consensus       257 ~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          257 AKLRIVN----GKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             -------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHhhc----CcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            5433322    223334455667789999999999999999999999999998764

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=3.7e-33  Score=217.12  Aligned_cols=176  Identities=21%  Similarity=0.319  Sum_probs=147.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC---C
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD---L   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~---~   94 (223)
                      .+++||+.+++|.+++...+               .+++..++.++.|++.||.|||+.|++|+||+|.||+++.+   +
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~  161 (287)
T 2wei_A           97 YIVGELYTGGELFDEIIKRK---------------RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC  161 (287)
T ss_dssp             EEEECCCCSCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTC
T ss_pred             EEEEEccCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcc
Confidence            37899999999999998654               49999999999999999999999999999999999999754   4


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++++|||++.......  ......++..|+|||.+.+ .++.++|+||+|+++++|+ +|..||.+.........+...
T Consensus       162 ~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~~~~~~~~~~~  237 (287)
T 2wei_A          162 DIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILL-SGTPPFYGKNEYDILKRVETG  237 (287)
T ss_dssp             CEEECSTTGGGTBCCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHC
T ss_pred             cEEEeccCcceeecCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHcC
Confidence            69999999886543321  1122345778999999865 4889999999999999999 799999998888887777766


Q ss_pred             cccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......  ...+++++.+++.+||+.||.+||++.+++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          238 KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             CCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             CCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence            443332  25678999999999999999999999999985

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=3.2e-33  Score=223.23  Aligned_cols=175  Identities=18%  Similarity=0.285  Sum_probs=141.4

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeee--------
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI--------   90 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~--------   90 (223)
                      +||||+ +++|.+++.....             ..+++..++.++.||+.||.|||+.|++||||||.||++        
T Consensus        99 lv~e~~-~~~l~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~  164 (355)
T 2eu9_A           99 IAFELL-GKNTFEFLKENNF-------------QPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETL  164 (355)
T ss_dssp             EEEECC-CCBHHHHHHHTTT-------------CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEE
T ss_pred             EEEecc-CCChHHHHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccc
Confidence            778888 7888888876543             469999999999999999999999999999999999999        


Q ss_pred             -----------ecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCC
Q psy15108         91 -----------SSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF  159 (223)
Q Consensus        91 -----------~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~  159 (223)
                                 +..+.++++|||++......    .....++..|+|||.+.+..++.++|+||+|+++|+|+ +|..||
T Consensus       165 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~pf  239 (355)
T 2eu9_A          165 YNEHKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY-RGFTLF  239 (355)
T ss_dssp             ECCC-CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSC
T ss_pred             ccccccccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHH-hCCCCC
Confidence                       66788999999998753222    23457789999999999889999999999999999999 799999


Q ss_pred             CCCCHHHHHHHHHhCccc---------------------C---------------------CCCCCChHHHHHHHHHhcC
Q psy15108        160 PDLSDDQVLSQLESKKLC---------------------W---------------------KHSSKTPEYITSLHEKCIH  197 (223)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~---------------------~---------------------~~~~~~~~~~~~li~~~l~  197 (223)
                      ...........+......                     +                     ......+.++.+++.+||+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  319 (355)
T 2eu9_A          240 QTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE  319 (355)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhc
Confidence            988766554443221000                     0                     0111224578899999999


Q ss_pred             CCCCCCCCHHHHHHH
Q psy15108        198 PHPHQRPTFPSIVTQ  212 (223)
Q Consensus       198 ~dp~~Rps~~~ll~~  212 (223)
                      .||.+|||++++++|
T Consensus       320 ~dP~~Rpt~~e~l~h  334 (355)
T 2eu9_A          320 FDPAQRITLAEALLH  334 (355)
T ss_dssp             SSTTTSCCHHHHTTS
T ss_pred             CChhhCcCHHHHhcC
Confidence            999999999999865

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.9e-33  Score=222.89  Aligned_cols=177  Identities=19%  Similarity=0.238  Sum_probs=137.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee-----c
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-----S   92 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~-----~   92 (223)
                      .+||||+. |+|.+++...+               .+++..+..++.||+.||.|||+.|++||||||+||+++     .
T Consensus       109 ~lv~e~~~-~~L~~~~~~~~---------------~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~  172 (329)
T 3gbz_A          109 HLIFEYAE-NDLKKYMDKNP---------------DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASE  172 (329)
T ss_dssp             EEEEECCS-EEHHHHHHHCT---------------TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----
T ss_pred             EEEEecCC-CCHHHHHhhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCc
Confidence            37889988 59999998754               499999999999999999999999999999999999995     4


Q ss_pred             CCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         93 DLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        93 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      .+.++|+|||++....... .......++..|+|||.+.+.. ++.++||||+||++|+|+ +|..||.+.........+
T Consensus       173 ~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~~~~~  250 (329)
T 3gbz_A          173 TPVLKIGDFGLARAFGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML-MKTPLFPGDSEIDQLFKI  250 (329)
T ss_dssp             CCEEEECCTTHHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHH
T ss_pred             cceEEECcCCCccccCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHH-HCCCCcCCCCHHHHHHHH
Confidence            4559999999986543221 1223446688999999987644 799999999999999999 799999988877666555


Q ss_pred             HhCcccCCC----------------------------CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKLCWKH----------------------------SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~----------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......+..                            ...+++++.+++.+||+.||.+|||++|+++|
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          251 FEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH  319 (329)
T ss_dssp             HHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence            432110000                            01156889999999999999999999999875

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.3e-33  Score=233.36  Aligned_cols=174  Identities=16%  Similarity=0.218  Sum_probs=135.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.++ |.+.+.                 ..+++..+..++.||+.||.|||+.|++||||||.||+++.++.+|
T Consensus       143 ~lv~E~~~~~-l~~~~~-----------------~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~k  204 (464)
T 3ttj_A          143 YLVMELMDAN-LCQVIQ-----------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK  204 (464)
T ss_dssp             EEEEECCSEE-HHHHHT-----------------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             EEEEeCCCCC-HHHHHh-----------------hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEE
Confidence            4788888765 666663                 2489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      |+|||+++......  ......+++.|+|||.+.+..++.++||||+||++|+|+ +|+.||.+.+....+..+......
T Consensus       205 l~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-~g~~pF~g~~~~~~~~~i~~~lg~  281 (464)
T 3ttj_A          205 ILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT  281 (464)
T ss_dssp             ECCCCCC-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred             EEEEEeeeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHhcCC
Confidence            99999997543321  223457789999999999999999999999999999999 799999988876655554331000


Q ss_pred             C-------------------CCCCC---------------------ChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 W-------------------KHSSK---------------------TPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ~-------------------~~~~~---------------------~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +                   +....                     .++++.+|+.+||+.||++|||++|+++|
T Consensus       282 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          282 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             CCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0                   00000                     04678999999999999999999999976

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=6.8e-33  Score=217.21  Aligned_cols=179  Identities=18%  Similarity=0.209  Sum_probs=149.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+| |.+++.....             ..+++..+..++.|+++||.|||+.|++|+||+|.||+++.++.+
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~~~-------------~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~  148 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSVPE-------------KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTL  148 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHSTT-------------CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCE
T ss_pred             EEEEehhccCC-HHHHHHhCcc-------------cccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcE
Confidence            34788999877 8888876433             469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCC--CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEF--STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~--~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +++|||++....... ........++..|+|||.+.+...  +.++|+||+|+++|+|+ +|..||.+....+....+..
T Consensus       149 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~i~~  227 (305)
T 2wtk_C          149 KISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNIT-TGLYPFEGDNIYKLFENIGK  227 (305)
T ss_dssp             EECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHH
T ss_pred             EeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHH-hCCCCCCCchHHHHHHHHhc
Confidence            999999987543221 111234567889999999876443  67899999999999999 79999999888888777766


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..  ...+..+++.+.+++.+||+.||.+||++++++++
T Consensus       228 ~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          228 GS--YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             CC--CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             CC--CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            53  33456789999999999999999999999999976

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=8.1e-33  Score=217.72  Aligned_cols=177  Identities=18%  Similarity=0.288  Sum_probs=139.5

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++|| +.+++|.+++...+               .+++..+..++.|+++||.|||+.|++|+||+|.||+++. +.+++
T Consensus       105 lv~e-~~~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL  167 (313)
T 3cek_A          105 MVME-CGNIDLNSWLKKKK---------------SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKL  167 (313)
T ss_dssp             EEEC-CCSEEHHHHHHHCS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEE
T ss_pred             EEEe-cCCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEE
Confidence            6677 78899999998653               4899999999999999999999999999999999999964 78999


Q ss_pred             cCCCCCcccchhhh-hhhhcCCccccccccccccc-----------CCCCcccchHHHHHHHHHHHhCCCCCCCCCC-HH
Q psy15108         99 SLSGLSKDTYQKEY-YKYRNAILPLRWLPYEAVFD-----------DEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DD  165 (223)
Q Consensus        99 ~df~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~-----------~~~~~~~Di~slG~il~~l~~~~~~p~~~~~-~~  165 (223)
                      +|||++........ .......++..|+|||.+..           ..++.++||||||+++|+|+ +|..||.... ..
T Consensus       168 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~~~  246 (313)
T 3cek_A          168 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT-YGKTPFQQIINQI  246 (313)
T ss_dssp             CCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHH-HSSCTTTTCCSHH
T ss_pred             eeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHH-hCCCchhhHHHHH
Confidence            99999976543321 12234567899999999865           36788999999999999999 7999997654 33


Q ss_pred             HHHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy15108        166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL  213 (223)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L  213 (223)
                      .....+.........+...+.++.+++.+||+.||.+||++++++++-
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~  294 (313)
T 3cek_A          247 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  294 (313)
T ss_dssp             HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             HHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence            444444444444555667789999999999999999999999999763

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=5.8e-34  Score=225.55  Aligned_cols=179  Identities=17%  Similarity=0.249  Sum_probs=138.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|||||.+|+|.++++....            ....++..++.++.|++.||.|||+.|++||||||.||+++.++.++
T Consensus       137 ~lv~e~~~~~~L~~~~~~~~~------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k  204 (332)
T 3qd2_B          137 YIQMQLCRKENLKDWMNRRCS------------LEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVK  204 (332)
T ss_dssp             EEEEECCCSSCHHHHHHTCCS------------GGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred             EEEEEecCCCCHHHHHhcccC------------ccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEE
Confidence            488999999999999986533            23467788999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh-----------hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy15108         98 ISLSGLSKDTYQKE-----------YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ  166 (223)
Q Consensus        98 l~df~~~~~~~~~~-----------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~  166 (223)
                      ++|||++.......           ........+++.|+|||.+.+..++.++|+||+|+++|+|+ ++..|+..  ...
T Consensus       205 L~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~~~~~~~~--~~~  281 (332)
T 3qd2_B          205 VGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL-YSFSTQME--RVR  281 (332)
T ss_dssp             ECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHH-SCCCCHHH--HHH
T ss_pred             EeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHH-HcCCChhH--HHH
Confidence            99999987654322           11223456889999999999889999999999999999999 66554321  122


Q ss_pred             HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+.... ........++++.+++.+||+.||.+||++++++++
T Consensus       282 ~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          282 IITDVRNLK-FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHHHTTC-CCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             HHHHhhccC-CCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence            222222221 111112345678999999999999999999999875

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.3e-33  Score=230.78  Aligned_cols=177  Identities=19%  Similarity=0.243  Sum_probs=137.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC---
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~---   94 (223)
                      .+||||+.+|+|.+++...               ..+++..+..++.|++.||.|||+.+++||||||+||+++..+   
T Consensus       215 ~lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~  279 (419)
T 3i6u_A          215 YIVLELMEGGELFDKVVGN---------------KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDC  279 (419)
T ss_dssp             EEEEECCTTCBGGGGTSSS---------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSC
T ss_pred             EEEEEcCCCCcHHHHHhcc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcc
Confidence            3789999999999988643               3599999999999999999999999999999999999997544   


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCccccccccccccc---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHH
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD---DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQ  170 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~~  170 (223)
                      .++++|||++.......  ......+++.|+|||.+..   ..++.++|+||+|+++|+|+ +|..||...... .....
T Consensus       280 ~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~ll-tg~~pf~~~~~~~~~~~~  356 (419)
T 3i6u_A          280 LIKITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL-SGYPPFSEHRTQVSLKDQ  356 (419)
T ss_dssp             CEEECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHH-HSSCSSCCCSSSCCHHHH
T ss_pred             eEEEeecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHH-HCCCCCCCCcchHHHHHH
Confidence            49999999997654332  2234567899999999853   55788999999999999999 799999765432 33344


Q ss_pred             HHhCcccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        171 LESKKLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       171 ~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +........  ....+++.+.+++.+||+.||.+||+++++++|
T Consensus       357 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          357 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             HHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            444322221  124578899999999999999999999999875

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=4e-33  Score=218.19  Aligned_cols=188  Identities=20%  Similarity=0.237  Sum_probs=144.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++......       +......+++..++.++.|++.||.|||+.|++|+||+|.||+++.++.+
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~  160 (303)
T 2vwi_A           88 LWLVMKLLSGGSVLDIIKHIVAK-------GEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSV  160 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHT-------TTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCE
T ss_pred             cEEEehhccCCchHHHHHHHhhc-------cccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCE
Confidence            34789999999999999864321       11123469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh----hhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKE----YYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~----~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      +++|||++.......    ........++..|+|||.+.. ..++.++|+||+|+++|+|+ +|..||............
T Consensus       161 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~~  239 (303)
T 2vwi_A          161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA-TGAAPYHKYPPMKVLMLT  239 (303)
T ss_dssp             EECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHH-HSSCTTTTSCGGGHHHHH
T ss_pred             EEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHH-hCCCCCccCchhhHHHHH
Confidence            999999876543221    111234467888999999865 56889999999999999999 799999887765554443


Q ss_pred             HhCccc--------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKLC--------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......        ......++.++.+++.+||+.||.+||++.+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          240 LQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH  288 (303)
T ss_dssp             HTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            332111        11234578899999999999999999999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=8.4e-34  Score=230.31  Aligned_cols=188  Identities=14%  Similarity=0.199  Sum_probs=148.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeee----ecC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI----SSD   93 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~----~~~   93 (223)
                      .+||||+.+|+|.++++....            ...+++..++.++.||+.||.|||+.|++||||||.||++    +..
T Consensus        85 ~lv~e~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~  152 (396)
T 4eut_A           85 VLIMEFCPCGSLYTVLEEPSN------------AYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ  152 (396)
T ss_dssp             EEEECCCTTEEHHHHTTSGGG------------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSC
T ss_pred             EEEEecCCCCCHHHHHHhhhc------------ccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCc
Confidence            488999999999999976533            1349999999999999999999999999999999999998    666


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCccccccccccccc--------CCCCcccchHHHHHHHHHHHhCCCCCCCCCC--
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD--------DEFSTKSDVYAYACLIWEIFNKGEMPFPDLS--  163 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--------~~~~~~~Di~slG~il~~l~~~~~~p~~~~~--  163 (223)
                      +.++++|||++.......  ......++..|+|||.+..        ..++.++|||||||++|+|+ +|..||....  
T Consensus       153 ~~~kL~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~-tg~~Pf~~~~~~  229 (396)
T 4eut_A          153 SVYKLTDFGAARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA-TGSLPFRPFEGP  229 (396)
T ss_dssp             EEEEECCGGGCEECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHH-HSSCSEECTTCT
T ss_pred             eeEEEecCCCceEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHH-HCCCCCCCCCcc
Confidence            779999999997654432  2234568899999999764        45678999999999999999 7999996432  


Q ss_pred             --HHHHHHHHHhCcccC-------------------C----CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        164 --DDQVLSQLESKKLCW-------------------K----HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       164 --~~~~~~~~~~~~~~~-------------------~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                        ..+....+..+.+..                   +    ....++..+.+++.+||+.||++||+++++++.+.+++.
T Consensus       230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             TTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             cchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence              234444444332110                   0    112245678899999999999999999999999999886


Q ss_pred             hc
Q psy15108        219 ND  220 (223)
Q Consensus       219 ~~  220 (223)
                      ..
T Consensus       310 ~~  311 (396)
T 4eut_A          310 RM  311 (396)
T ss_dssp             CE
T ss_pred             ce
Confidence            53

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=8e-33  Score=226.10  Aligned_cols=179  Identities=18%  Similarity=0.226  Sum_probs=141.1

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC-CCeE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVK   97 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~-~~~~   97 (223)
                      +|+||+.+ +|.+++.....           ....+++..+..++.||++||.|||+.|++||||||.||+++.+ +.+|
T Consensus       130 lv~e~~~~-~l~~~~~~~~~-----------~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~k  197 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSR-----------AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK  197 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHH-----------TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEE
T ss_pred             eehhcccc-cHHHHHHHHhh-----------ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEE
Confidence            68888885 67777764322           22469999999999999999999999999999999999999965 5689


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC--
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK--  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~--  174 (223)
                      |+|||+++......  ......++..|+|||.+.+. .++.++||||+||++|+|+ +|..||.+.+....+..+...  
T Consensus       198 l~DFG~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell-~G~~pf~~~~~~~~l~~i~~~lg  274 (420)
T 1j1b_A          198 LCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLG  274 (420)
T ss_dssp             ECCCTTCEECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             eccchhhhhcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHhC
Confidence            99999997543322  12345678899999998764 6899999999999999999 799999988765554443321  


Q ss_pred             ---------------cccCC----------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 ---------------KLCWK----------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ---------------~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                     ....+          .....++++.+|+.+||+.||.+||++.|+++|
T Consensus       275 ~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          275 TPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             SCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence                           00010          123467889999999999999999999999876

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=6.2e-33  Score=225.04  Aligned_cols=179  Identities=17%  Similarity=0.167  Sum_probs=141.0

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee-cCCCeE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLSVK   97 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~-~~~~~~   97 (223)
                      +||||+.++.+..+......            ...+++..+..++.||++||.|||+.|++||||||+||+++ .++.++
T Consensus       115 lv~e~~~~~l~~~~~~~~~~------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~k  182 (394)
T 4e7w_A          115 LVLEYVPETVYRASRHYAKL------------KQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLK  182 (394)
T ss_dssp             EEEECCSEEHHHHHHHHHHT------------TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEE
T ss_pred             EEeeccCccHHHHHHHHHhh------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEE
Confidence            78899887654444432211            24699999999999999999999999999999999999999 788999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc-
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK-  175 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~-  175 (223)
                      ++|||+++......  ......++..|+|||.+.+. .++.++||||+||++|+|+ +|..||.+.+....+..+.... 
T Consensus       183 L~DFG~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~l~~i~~~~g  259 (394)
T 4e7w_A          183 LIDFGSAKILIAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM-QGQPLFPGESGIDQLVEIIKVLG  259 (394)
T ss_dssp             ECCCTTCEECCTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             EeeCCCcccccCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHhC
Confidence            99999997543322  22345678899999998765 4899999999999999999 7999999888765554443210 


Q ss_pred             -------------c---c----------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 -------------L---C----------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 -------------~---~----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                   .   .          .......++++.+++.+||+.||.+||++.++++|
T Consensus       260 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          260 TPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             CCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             CCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence                         0   0          00123477899999999999999999999999876

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=2.3e-33  Score=222.51  Aligned_cols=178  Identities=23%  Similarity=0.319  Sum_probs=140.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+++|.+++...               ..+++..+..++.|++.||.|||+.|++|+||||.||+++.++.++
T Consensus       100 ~lv~e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~k  164 (331)
T 4aaa_A          100 YLVFEFVDHTILDDLELFP---------------NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVK  164 (331)
T ss_dssp             EEEEECCSEEHHHHHHHST---------------TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             EEEEecCCcchHHHHHhhc---------------cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEE
Confidence            3789999999999987654               3499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc-
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK-  175 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~-  175 (223)
                      ++|||++....... .......++..|+|||.+.+. .++.++||||+|+++|+|+ +|..||.+.........+.... 
T Consensus       165 l~Dfg~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~~  242 (331)
T 4aaa_A          165 LCDFGFARTLAAPG-EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF-MGEPLFPGDSDIDQLYHIMMCLG  242 (331)
T ss_dssp             ECCCTTC-------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             EEeCCCceeecCCc-cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhC
Confidence            99999987543322 122345678889999998765 6889999999999999999 7999998887665544432210 


Q ss_pred             ------------------ccCC----------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ------------------LCWK----------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ------------------~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                        ...+          ....+++++.+++.+||+.||.+||+++|+++|
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          243 NLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             SCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence                              0000          013568899999999999999999999999875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=6.9e-33  Score=216.12  Aligned_cols=181  Identities=19%  Similarity=0.254  Sum_probs=143.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec-CCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~-~~~~   96 (223)
                      .+|+||+++++|.+++.....            ...+++..+..++.|++.||.|||+.|++|+||+|.||+++. ++.+
T Consensus        95 ~lv~e~~~~~~L~~~l~~~~~------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~  162 (295)
T 2clq_A           95 KIFMEQVPGGSLSALLRSKWG------------PLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVL  162 (295)
T ss_dssp             EEEEECCSEEEHHHHHHHTTC------------CCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCE
T ss_pred             EEEEEeCCCCCHHHHHHhhcc------------CCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCE
Confidence            378999999999999986532            135789999999999999999999999999999999999997 7899


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCC--CCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~~~~~  173 (223)
                      +++|||++........ ......++..|+|||.+....  ++.++|+||||+++|+|+ +|..||...... ........
T Consensus       163 kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~~~~~  240 (295)
T 2clq_A          163 KISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMA-TGKPPFYELGEPQAAMFKVGM  240 (295)
T ss_dssp             EECCTTTCEESCC------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHH-HTSCTTGGGSSHHHHHHHHHH
T ss_pred             EEeecccccccCCCCC-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHH-HCCCCccCCCchhHHHHhhcc
Confidence            9999999875433221 123456788999999987543  788999999999999999 699999755432 22222222


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .......+..++.++.+++.+||+.||++||++++++++
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          241 FKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             HCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            223344566789999999999999999999999999865

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.9e-33  Score=222.58  Aligned_cols=179  Identities=18%  Similarity=0.213  Sum_probs=144.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+ +|.+++....              ..+++..+..++.|+++||.|||+.|++||||||.||+++.++.+
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~~--------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  151 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDNS--------------LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVL  151 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTCC--------------SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCE
T ss_pred             eEEEEEcCCC-CHHHHHHhcC--------------cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCE
Confidence            4478888886 8999987543              358999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++....... .......++..|+|||.+.+. .++.++||||+||++|+|+ +|..||.+.........+....
T Consensus       152 kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~~~~~~~~~~~~~~i~~~~  229 (346)
T 1ua2_A          152 KLADFGLAKSFGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL-LRVPFLPGDSDLDQLTRIFETL  229 (346)
T ss_dssp             EECCCGGGSTTTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHHH
T ss_pred             EEEecccceeccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHH-HCCCCCCCCCHHHHHHHHHHHc
Confidence            999999987543221 122345678899999998654 4788999999999999999 6999999888776666554321


Q ss_pred             cc-----CC---------------------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LC-----WK---------------------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~-----~~---------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..     ++                     .....++++.+++.+||+.||.+|||++|+++|
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          230 GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             CCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            10     00                     013456889999999999999999999999876

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.8e-33  Score=224.39  Aligned_cols=178  Identities=15%  Similarity=0.197  Sum_probs=147.9

Q ss_pred             CCCCCCCCCCChHHH------HHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeee
Q psy15108         18 SGSGKPRVKGDLKQF------LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLI   90 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~------l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~   90 (223)
                      .+||||+.+|+|.++      +...             ....+++..++.++.|++.||.|||+ .|++|+||+|.||++
T Consensus       119 ~lv~e~~~~~~L~~~~~~~~~l~~~-------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~  185 (348)
T 2pml_X          119 YIIYEYMENDSILKFDEYFFVLDKN-------------YTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM  185 (348)
T ss_dssp             EEEEECCTTCBSSEESSSEESSCSS-------------SCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEE
T ss_pred             EEEEeccCCCcHHHHHHHhhhhhhc-------------cccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEE
Confidence            378999999999998      4331             13569999999999999999999999 999999999999999


Q ss_pred             ecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCc-ccchHHHHHHHHHHHhCCCCCCCCCCH-HHH
Q psy15108         91 SSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFST-KSDVYAYACLIWEIFNKGEMPFPDLSD-DQV  167 (223)
Q Consensus        91 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~-~~Di~slG~il~~l~~~~~~p~~~~~~-~~~  167 (223)
                      +.++.++++|||.+......   ......++..|+|||.+.+. .++. ++|+||+|+++++|+ +|..||..... .+.
T Consensus       186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~  261 (348)
T 2pml_X          186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF-YNVVPFSLKISLVEL  261 (348)
T ss_dssp             CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHH-HSSCSSCCSSCSHHH
T ss_pred             cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHH-hCCCCCCCCCcHHHH
Confidence            99999999999998764332   23445678899999999877 5555 899999999999999 79999987776 666


Q ss_pred             HHHHHhCcccCCCC-----------------CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        168 LSQLESKKLCWKHS-----------------SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       168 ~~~~~~~~~~~~~~-----------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+.......+..                 ..++.++.+++.+||+.||.+||+++++++|
T Consensus       262 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            66666554333321                 5678999999999999999999999999875

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=6.2e-33  Score=224.19  Aligned_cols=175  Identities=17%  Similarity=0.139  Sum_probs=141.4

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--cCCcccCCCCCCCeeee--cCC
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS--DKRLIHKDIAARNCLIS--SDL   94 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~i~H~di~~~nil~~--~~~   94 (223)
                      +||||+. |+|.+++.....             ..+++..+..++.|++.||.|||  +.|++||||||+||+++  .++
T Consensus       133 lv~e~~~-~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~  198 (382)
T 2vx3_A          133 LVFEMLS-YNLYDLLRNTNF-------------RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRS  198 (382)
T ss_dssp             EEEECCC-CBHHHHHHHTTT-------------SCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSC
T ss_pred             EEEecCC-CCHHHHHhhcCc-------------CCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCC
Confidence            7889885 699999987643             45999999999999999999999  47999999999999995  467


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++|+|||++......    .....+++.|+|||.+.+..++.++|||||||++|+|+ +|..||.+.+..+.+..+...
T Consensus       199 ~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-tg~~pf~~~~~~~~~~~i~~~  273 (382)
T 2vx3_A          199 AIKIVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMH-TGEPLFSGANEVDQMNKIVEV  273 (382)
T ss_dssp             CEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHH
T ss_pred             cEEEEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHH
Confidence            8999999999755322    23457788999999999889999999999999999999 799999988877666555431


Q ss_pred             cccCC-----------------------------------CC--C-------------------------CChHHHHHHH
Q psy15108        175 KLCWK-----------------------------------HS--S-------------------------KTPEYITSLH  192 (223)
Q Consensus       175 ~~~~~-----------------------------------~~--~-------------------------~~~~~~~~li  192 (223)
                      ...++                                   .+  .                         ...+++.+|+
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli  353 (382)
T 2vx3_A          274 LGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLI  353 (382)
T ss_dssp             HCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHH
T ss_pred             hCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHH
Confidence            10000                                   00  0                         0014689999


Q ss_pred             HHhcCCCCCCCCCHHHHHHH
Q psy15108        193 EKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       193 ~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+||+.||++|||++|+++|
T Consensus       354 ~~mL~~dP~~Rpta~e~L~h  373 (382)
T 2vx3_A          354 LRMLDYDPKTRIQPYYALQH  373 (382)
T ss_dssp             HHHTCSCTTTSCCHHHHTTS
T ss_pred             HHhcCCChhhCCCHHHHhcC
Confidence            99999999999999999875

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.98  E-value=8e-33  Score=222.19  Aligned_cols=176  Identities=17%  Similarity=0.247  Sum_probs=141.7

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|++|+. |+|.++++.                ..+++..+..++.|++.||.|||+.|++||||||.||+++.++.+++
T Consensus       107 iv~e~~~-~~L~~~l~~----------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl  169 (364)
T 3qyz_A          107 IVQDLME-TDLYKLLKT----------------QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI  169 (364)
T ss_dssp             EEEECCS-EEHHHHHHH----------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             EEEcccC-cCHHHHHHh----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEE
Confidence            6677776 699999975                25899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhh--hhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         99 SLSGLSKDTYQKEYY--KYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        99 ~df~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +|||++.........  ......+++.|+|||.+.+ ..++.++||||+|+++|+|+ +|..||.+.........+....
T Consensus       170 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~~~~i~~~~  248 (364)
T 3qyz_A          170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGIL  248 (364)
T ss_dssp             CCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHH-HSSCSSCCSSGGGHHHHHHHHH
T ss_pred             EeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHH-HCCCCCCCCChHHHHHHHHHHh
Confidence            999999765433211  1234578899999998654 44899999999999999999 7999998877665554443210


Q ss_pred             cc--------------------C---------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LC--------------------W---------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~--------------------~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..                    .         ......+.++.+++.+||+.||.+|||++++++|
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             CSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00                    0         0114567889999999999999999999999875

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.98  E-value=6.3e-33  Score=223.37  Aligned_cols=174  Identities=17%  Similarity=0.240  Sum_probs=133.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+. |+|.+++..                 .+++..+..++.||+.||.|||+.|++||||||+||+++.++.++
T Consensus       106 ~lv~e~~~-~~l~~~~~~-----------------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~k  167 (371)
T 2xrw_A          106 YIVMELMD-ANLCQVIQM-----------------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK  167 (371)
T ss_dssp             EEEEECCS-EEHHHHHHS-----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred             EEEEEcCC-CCHHHHHhh-----------------ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEE
Confidence            47888887 578888852                 489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++.......  ......++..|+|||.+.+..++.++||||+||++|+|+ +|..||.+.+....+..+......
T Consensus       168 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~~i~~~~~~  244 (371)
T 2xrw_A          168 ILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT  244 (371)
T ss_dssp             ECCCCC------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHC-CCC
T ss_pred             EEEeeccccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHhCC
Confidence            99999997553322  223456788999999999888999999999999999999 799999988876665554432100


Q ss_pred             C--------------------C--------------CCC------CChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 W--------------------K--------------HSS------KTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ~--------------------~--------------~~~------~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +                    .              .+.      ..+.++.+++.+||+.||.+|||++++++|
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          245 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             CCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             CCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence            0                    0              000      015678999999999999999999999986

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.98  E-value=9.6e-33  Score=220.60  Aligned_cols=179  Identities=18%  Similarity=0.234  Sum_probs=142.6

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+ +|.+.+....              ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++
T Consensus       100 ~lv~e~~~~-~l~~~l~~~~--------------~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~k  164 (351)
T 3mi9_A          100 YLVFDFCEH-DLAGLLSNVL--------------VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLK  164 (351)
T ss_dssp             EEEEECCSE-EHHHHHHCTT--------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             EEEEeccCC-CHHHHHhhcc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEE
Confidence            378899885 8888886543              3599999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh---hhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         98 ISLSGLSKDTYQKE---YYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        98 l~df~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      ++|||++.......   ........+++.|+|||.+.+ ..++.++||||+||++|+|+ +|..||.+.........+..
T Consensus       165 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~~~~i~~  243 (351)
T 3mi9_A          165 LADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW-TRSPIMQGNTEQHQLALISQ  243 (351)
T ss_dssp             ECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHH
T ss_pred             EccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHH
Confidence            99999987543211   112234567889999999875 45799999999999999999 79999998887766665543


Q ss_pred             CcccC--CCCCC----------------------------ChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCW--KHSSK----------------------------TPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~--~~~~~----------------------------~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....  .....                            .++++.+++.+||+.||.+|||++|+++|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             HHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            21111  11011                            15678999999999999999999999976

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.98  E-value=1.8e-32  Score=214.34  Aligned_cols=177  Identities=18%  Similarity=0.236  Sum_probs=136.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+.+|+|.+++...+.              .+++..++.++.|+++||.|||+.|++|+||+|.||+++.++.++
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~k  156 (303)
T 1zy4_A           91 FIQMEYCENGTLYDLIHSENL--------------NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVK  156 (303)
T ss_dssp             EEEEECCCSCBHHHHHHHSCG--------------GGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred             EEEEecCCCCCHHHhhhcccc--------------ccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEE
Confidence            378999999999999986543              588999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh-------------hhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCC-
Q psy15108         98 ISLSGLSKDTYQKE-------------YYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDL-  162 (223)
Q Consensus        98 l~df~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~-  162 (223)
                      ++|||++.......             ........++..|+|||.+.+. .++.++|+||+|+++|+|+ +   ||... 
T Consensus       157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~---p~~~~~  232 (303)
T 1zy4_A          157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-Y---PFSTGM  232 (303)
T ss_dssp             ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHH-S---CCSSHH
T ss_pred             EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHH-h---ccCCch
Confidence            99999987543211             1112345678889999998754 6889999999999999999 4   55432 


Q ss_pred             CHHHHHHHHHhCcc--cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        163 SDDQVLSQLESKKL--CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       163 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ........+.....  ....+...+..+.+++.+||+.||.+||++++++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          233 ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             hHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            23334444443322  222345667889999999999999999999999975

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.98  E-value=2.5e-32  Score=225.56  Aligned_cols=179  Identities=18%  Similarity=0.281  Sum_probs=131.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+ +|+|.++++..               ..+++..+..++.||+.||.|||+.|++||||||.||+++.++.+|
T Consensus       133 ~lv~e~~-~~~L~~~~~~~---------------~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~k  196 (458)
T 3rp9_A          133 YVVLEIA-DSDFKKLFRTP---------------VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVK  196 (458)
T ss_dssp             EEEECCC-SEEHHHHHHSS---------------CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEE
T ss_pred             EEEEecc-ccchhhhcccC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEe
Confidence            3778875 68999999754               3499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhh--------------------------hhhhhcCCccccccccccc-ccCCCCcccchHHHHHHHHH
Q psy15108         98 ISLSGLSKDTYQKE--------------------------YYKYRNAILPLRWLPYEAV-FDDEFSTKSDVYAYACLIWE  150 (223)
Q Consensus        98 l~df~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~pe~~-~~~~~~~~~Di~slG~il~~  150 (223)
                      |+|||+++......                          ........+|+.|+|||++ ....++.++||||+||++||
T Consensus       197 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~e  276 (458)
T 3rp9_A          197 VCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAE  276 (458)
T ss_dssp             ECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             ecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHH
Confidence            99999997643211                          0122345678999999986 45668999999999999999


Q ss_pred             HHhC----------CCCCCCCCCH--------------------HHHHHHHHh-----------------------Cc--
Q psy15108        151 IFNK----------GEMPFPDLSD--------------------DQVLSQLES-----------------------KK--  175 (223)
Q Consensus       151 l~~~----------~~~p~~~~~~--------------------~~~~~~~~~-----------------------~~--  175 (223)
                      |++.          +..+|.+...                    ...+..+..                       ..  
T Consensus       277 lltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~  356 (458)
T 3rp9_A          277 LLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPK  356 (458)
T ss_dssp             HHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCC
T ss_pred             HHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCC
Confidence            9931          5666655431                    011111100                       00  


Q ss_pred             ----ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ----LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                          ......+..++++.+|+.+||+.||.+|||++|+++|
T Consensus       357 ~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H  397 (458)
T 3rp9_A          357 REGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH  397 (458)
T ss_dssp             CCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence                0001123458889999999999999999999999986

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.98  E-value=8.5e-33  Score=221.75  Aligned_cols=177  Identities=16%  Similarity=0.216  Sum_probs=137.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+. |+|.+++...+              ..+++..+..++.||+.||.|||+.|++|+||||.||+++.++.++
T Consensus       110 ~lv~e~~~-~~l~~~~~~~~--------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~k  174 (362)
T 3pg1_A          110 YLVTELMR-TDLAQVIHDQR--------------IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDIT  174 (362)
T ss_dssp             EEEEECCS-EEHHHHHHCTT--------------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred             EEEEccCC-CCHHHHHHhcc--------------cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEE
Confidence            37788888 79999997543              3699999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++.......  ......++..|+|||.+.+ ..++.++||||+|+++|+|+ +|..||.+.........+.....
T Consensus       175 l~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~~~~~~~i~~~~~  251 (362)
T 3pg1_A          175 ICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFRGSTFYNQLNKIVEVVG  251 (362)
T ss_dssp             ECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             EEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHcC
Confidence            99999987443322  2234567888999999876 56899999999999999999 79999998877666555432100


Q ss_pred             cC------------------------------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 CW------------------------------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~~------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+                              ......++.+.+++.+||+.||.+|||++++++|
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            00                              0123457889999999999999999999999876

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.98  E-value=3.2e-32  Score=223.32  Aligned_cols=178  Identities=19%  Similarity=0.285  Sum_probs=132.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|+||+. |+|.++++..               ..+++..+..++.||+.||.|||+.|++||||||+||+++.++.++
T Consensus       106 ~lv~e~~~-~~L~~~~~~~---------------~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~k  169 (432)
T 3n9x_A          106 YIVLEIAD-SDLKKLFKTP---------------IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVK  169 (432)
T ss_dssp             EEEEECCS-EEHHHHHHSS---------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred             EEEEecCC-cCHHHHHhcc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEE
Confidence            37788766 6999999754               3499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhh---------------------hhhhcCCccccccccccc-ccCCCCcccchHHHHHHHHHHHhC-
Q psy15108         98 ISLSGLSKDTYQKEY---------------------YKYRNAILPLRWLPYEAV-FDDEFSTKSDVYAYACLIWEIFNK-  154 (223)
Q Consensus        98 l~df~~~~~~~~~~~---------------------~~~~~~~~~~~~~~pe~~-~~~~~~~~~Di~slG~il~~l~~~-  154 (223)
                      |+|||+++.......                     .......++..|+|||.+ ....++.++||||+||++|+|+ + 
T Consensus       170 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell-~g  248 (432)
T 3n9x_A          170 VCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL-NM  248 (432)
T ss_dssp             ECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH-TT
T ss_pred             EccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHH-hc
Confidence            999999976543221                     112456789999999986 4566899999999999999999 4 


Q ss_pred             ----------CCCCCCCCCH-----------------HHH------------------------HHHHHhCcccCC----
Q psy15108        155 ----------GEMPFPDLSD-----------------DQV------------------------LSQLESKKLCWK----  179 (223)
Q Consensus       155 ----------~~~p~~~~~~-----------------~~~------------------------~~~~~~~~~~~~----  179 (223)
                                +..+|.+.+.                 ...                        ...+........    
T Consensus       249 ~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (432)
T 3n9x_A          249 LQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLK  328 (432)
T ss_dssp             CTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHH
T ss_pred             ccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHH
Confidence                      4444443320                 000                        111111100000    


Q ss_pred             -CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        180 -HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       180 -~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       ..+..++++.+++.+||+.||.+|||++|+++|
T Consensus       329 ~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  362 (432)
T 3n9x_A          329 QKYPSISDDGINLLESMLKFNPNKRITIDQALDH  362 (432)
T ss_dssp             HHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTC
T ss_pred             HHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence             014578899999999999999999999999976

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.98  E-value=6.2e-33  Score=223.01  Aligned_cols=173  Identities=18%  Similarity=0.255  Sum_probs=128.7

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++++++ +++|.++++.                ..+++..+..++.||++||.|||+.|++||||||.||+++.++.++
T Consensus       110 ~lv~e~~-~~~L~~~~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~k  172 (367)
T 2fst_X          110 YLVTHLM-GADLNNIVKC----------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK  172 (367)
T ss_dssp             EEEEECC-CEECC---------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred             EEEeccc-CCCHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEE
Confidence            3556665 7999999864                2589999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||+++.....    .....++..|+|||.+.+ ..++.++||||+||++++|+ +|..||.+.+....+..+.....
T Consensus       173 L~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~l~~i~~~~g  247 (367)
T 2fst_X          173 ILDFGLARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVG  247 (367)
T ss_dssp             ECC-------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             Eeecccccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHhC
Confidence            9999998754322    234567889999999876 56889999999999999999 79999998887665554432100


Q ss_pred             c--------------------CC---------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 C--------------------WK---------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~--------------------~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                    ..         .....++.+.+++.+||+.||.+|||++++++|
T Consensus       248 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             SCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence            0                    00         013457889999999999999999999999876

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.98  E-value=3.9e-33  Score=220.39  Aligned_cols=178  Identities=19%  Similarity=0.251  Sum_probs=142.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC-
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~-   95 (223)
                      ..+|+||+.+|+|.+++...               ..+++..+..++.||+.||.|||+.|++|+||||.||+++.++. 
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~  153 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGN---------------KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED  153 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTT---------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSS
T ss_pred             eEEEEecCCCCcHHHHHhcc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCC
Confidence            44789999999999999754               35999999999999999999999999999999999999987654 


Q ss_pred             --eEEcCCCCCcccchhhhhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHH
Q psy15108         96 --VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLS  169 (223)
Q Consensus        96 --~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~  169 (223)
                        ++++|||++........  .....++..|+|||.+.   ...++.++||||||+++|+|+ +|..||...... ....
T Consensus       154 ~~~kl~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~  230 (322)
T 2ycf_A          154 CLIKITDFGHSKILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL-SGYPPFSEHRTQVSLKD  230 (322)
T ss_dssp             CCEEECCCTTCEECCCCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHH-HSSCSSCSTTCSSCHHH
T ss_pred             CeEEEccCccceecccccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHH-hCCCCCcccchHHHHHH
Confidence              99999999976543321  22345788899999964   456889999999999999999 799999765432 3333


Q ss_pred             HHHhCcccC--CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        170 QLESKKLCW--KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       170 ~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .+.......  .....+++++.+++.+||+.||.+||++++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          231 QITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  275 (322)
T ss_dssp             HHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence            343332221  1124678899999999999999999999999864

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.98  E-value=6.2e-33  Score=224.76  Aligned_cols=177  Identities=20%  Similarity=0.296  Sum_probs=137.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCC-
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDL-   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~-   94 (223)
                      ..+||||+ +|+|.+++.....             ..+++..++.++.||+.||.|||++ |++||||||.||+++.++ 
T Consensus       120 ~~lv~e~~-~~~l~~~~~~~~~-------------~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~  185 (397)
T 1wak_A          120 ICMVFEVL-GHHLLKWIIKSNY-------------QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQ  185 (397)
T ss_dssp             EEEEECCC-CCBHHHHHHHTTT-------------SCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHH
T ss_pred             EEEEEecc-CccHHHHHHhccc-------------CCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccch
Confidence            33788988 7777777766533             4699999999999999999999998 999999999999998664 


Q ss_pred             ------------------------------------------------CeEEcCCCCCcccchhhhhhhhcCCccccccc
Q psy15108         95 ------------------------------------------------SVKISLSGLSKDTYQKEYYKYRNAILPLRWLP  126 (223)
Q Consensus        95 ------------------------------------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~  126 (223)
                                                                      .++++|||++......    .....++..|+|
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~a  261 (397)
T 1wak_A          186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRS  261 (397)
T ss_dssp             HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCC
T ss_pred             hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccC
Confidence                                                            7999999998754322    234567899999


Q ss_pred             ccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHh---C---------cc------------
Q psy15108        127 YEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD------DQVLSQLES---K---------KL------------  176 (223)
Q Consensus       127 pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~------~~~~~~~~~---~---------~~------------  176 (223)
                      ||.+.+..++.++|||||||++|+|+ +|..||.....      ......+..   .         ..            
T Consensus       262 PE~~~~~~~~~~~DiwslG~il~ell-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  340 (397)
T 1wak_A          262 LEVLIGSGYNTPADIWSTACMAFELA-TGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLK  340 (397)
T ss_dssp             HHHHHTSCCCTHHHHHHHHHHHHHHH-HSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBS
T ss_pred             ChhhcCCCCCcHHHHHHHHHHHHHHh-hCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccc
Confidence            99999888999999999999999999 79999975542      111111111   0         00            


Q ss_pred             ----------------cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 ----------------CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ----------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                      ....+...+..+.+++.+||+.||++|||++++++|
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          341 HITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             SCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             cccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence                            001112235678899999999999999999999875

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.98  E-value=1.7e-32  Score=217.32  Aligned_cols=175  Identities=13%  Similarity=0.188  Sum_probs=138.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC-C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-S   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~-~   95 (223)
                      ..+|+||+.+++|.++++                  .+++..+..++.|++.||.|||+.|++||||||.||+++.++ .
T Consensus       108 ~~lv~e~~~~~~l~~~~~------------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~  169 (330)
T 3nsz_A          108 PALVFEHVNNTDFKQLYQ------------------TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK  169 (330)
T ss_dssp             EEEEEECCCCCCHHHHGG------------------GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTE
T ss_pred             eEEEEeccCchhHHHHHH------------------hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCE
Confidence            347899999999999984                  389999999999999999999999999999999999999776 7


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHh
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDL-SDDQVLSQLES  173 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~-~~~~~~~~~~~  173 (223)
                      ++++|||++.......  ......++..|+|||.+.+ ..++.++||||+||++|+|+ +|..||... ........+..
T Consensus       170 ~kl~Dfg~a~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll-~g~~p~~~~~~~~~~l~~~~~  246 (330)
T 3nsz_A          170 LRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAK  246 (330)
T ss_dssp             EEECCCTTCEECCTTC--CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH-HTCSSSSCCSSHHHHHHHHHH
T ss_pred             EEEEeCCCceEcCCCC--ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHH-hCCCCcccCCchHHHHHHHHH
Confidence            9999999997543322  2234567888999999876 56899999999999999999 788888543 22222221111


Q ss_pred             -------------Ccc----------------------cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 -------------KKL----------------------CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 -------------~~~----------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                   ...                      .......+++++.+++.+||+.||.+|||++++++|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          247 VLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             HHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             hcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                         000                      001112268899999999999999999999999986

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.98  E-value=4.5e-32  Score=217.26  Aligned_cols=179  Identities=17%  Similarity=0.175  Sum_probs=141.8

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--cCCcccCCCCCCCeeeec-CCC
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS--DKRLIHKDIAARNCLISS-DLS   95 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~i~H~di~~~nil~~~-~~~   95 (223)
                      +||||+.+ +|.+.+.....           ....+++..+..++.|++.|+.|||  +.|++||||||.||+++. ++.
T Consensus       103 lv~e~~~~-~l~~~~~~~~~-----------~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~  170 (360)
T 3e3p_A          103 VVMEYVPD-TLHRCCRNYYR-----------RQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGT  170 (360)
T ss_dssp             EEEECCSC-BHHHHHHHHHT-----------TTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTE
T ss_pred             EEeecccc-cHHHHHHHHhh-----------cccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCc
Confidence            67888886 55555543222           2346899999999999999999999  999999999999999997 889


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++|+|||++.......  ......++..|+|||.+.+.. ++.++||||+||++|+|+ +|..||.+.........+...
T Consensus       171 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell-~g~~pf~~~~~~~~~~~~~~~  247 (360)
T 3e3p_A          171 LKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM-LGEPIFRGDNSAGQLHEIVRV  247 (360)
T ss_dssp             EEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHH
T ss_pred             EEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHH-hCCCCcCCCChHHHHHHHHHH
Confidence            9999999997654332  223456788899999986554 899999999999999999 799999988877666655431


Q ss_pred             cc------------------------------cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KL------------------------------CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..                              ........++++.+++.+||+.||.+|||+.|+++|
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            00                              011122357889999999999999999999999876

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.97  E-value=1e-32  Score=221.87  Aligned_cols=176  Identities=20%  Similarity=0.302  Sum_probs=136.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecC---
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSD---   93 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~---   93 (223)
                      .+++||+ +++|.+++.....             ..+++..+..++.||+.||.|||++ |++||||||.||+++..   
T Consensus       106 ~lv~e~~-~~~L~~~~~~~~~-------------~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~  171 (373)
T 1q8y_A          106 VMVFEVL-GENLLALIKKYEH-------------RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP  171 (373)
T ss_dssp             EEEECCC-CEEHHHHHHHTTT-------------SCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETT
T ss_pred             EEEEecC-CCCHHHHHHHhhc-------------cCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCC
Confidence            3678888 9999999987543             4599999999999999999999998 99999999999999543   


Q ss_pred             ---CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH------
Q psy15108         94 ---LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD------  164 (223)
Q Consensus        94 ---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~------  164 (223)
                         +.++++|||++......    .....++..|+|||.+.+..++.++||||||+++|+|+ +|..||.....      
T Consensus       172 ~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~~~~~~~  246 (373)
T 1q8y_A          172 ENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI-TGDFLFEPDEGHSYTKD  246 (373)
T ss_dssp             TTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHH-HSSCCC---------CH
T ss_pred             cCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHH-hCCCCCCCCcccccCCh
Confidence               36999999998754322    23456789999999999888999999999999999999 79999976542      


Q ss_pred             HHHHHHHHhCc----------------------------------------ccCCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy15108        165 DQVLSQLESKK----------------------------------------LCWKHSSKTPEYITSLHEKCIHPHPHQRP  204 (223)
Q Consensus       165 ~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  204 (223)
                      ......+....                                        .....+...+.++.+++.+||+.||.+||
T Consensus       247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  326 (373)
T 1q8y_A          247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA  326 (373)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred             HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence            11122211100                                        00112234467889999999999999999


Q ss_pred             CHHHHHHH
Q psy15108        205 TFPSIVTQ  212 (223)
Q Consensus       205 s~~~ll~~  212 (223)
                      |++++++|
T Consensus       327 t~~ell~h  334 (373)
T 1q8y_A          327 DAGGLVNH  334 (373)
T ss_dssp             CHHHHHTC
T ss_pred             CHHHHhhC
Confidence            99999875

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.97  E-value=3.7e-32  Score=218.84  Aligned_cols=172  Identities=17%  Similarity=0.233  Sum_probs=138.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|++|+. |+|.+++.                 ..+++..+..++.|++.||.|||+.|++||||||.||+++.++.++
T Consensus       123 ~lv~e~~~-~~l~~~~~-----------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~k  184 (371)
T 4exu_A          123 YLVMPFMQ-TDLQKIMG-----------------MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELK  184 (371)
T ss_dssp             EEEEECCC-EEHHHHTT-----------------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEE
T ss_pred             EEEEcccc-ccHHHHhh-----------------cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEE
Confidence            46778877 68888873                 2499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      |+|||++......    .....++..|+|||.+.+ ..++.++||||+|+++++|+ +|..||.+.+..+....+.....
T Consensus       185 L~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~~i~~~~~  259 (371)
T 4exu_A          185 ILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML-TGKTLFKGKDYLDQLTQILKVTG  259 (371)
T ss_dssp             ECSTTCC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             EEecCcccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhC
Confidence            9999998754322    234567889999999876 67899999999999999999 79999998887666555432100


Q ss_pred             c-----------------------C------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 C-----------------------W------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 ~-----------------------~------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .                       .      .....+++++.+++.+||+.||.+|||++++++|
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          260 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             CCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            0                       0      0123567889999999999999999999999876

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.97  E-value=1.3e-32  Score=217.33  Aligned_cols=168  Identities=19%  Similarity=0.252  Sum_probs=139.7

Q ss_pred             CCCCCCCCC-CChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee-cCCC
Q psy15108         18 SGSGKPRVK-GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLS   95 (223)
Q Consensus        18 ~~v~~~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~-~~~~   95 (223)
                      .+++|++.+ ++|.+++...+               .+++..++.++.|+++||.|||+.|++||||||.||+++ .++.
T Consensus       124 ~lv~e~~~~~~~L~~~l~~~~---------------~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~  188 (320)
T 3a99_A          124 VLILERPEPVQDLFDFITERG---------------ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE  188 (320)
T ss_dssp             EEEEECCSSEEEHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTE
T ss_pred             EEEEEcCCCCccHHHHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCC
Confidence            377888876 99999998754               499999999999999999999999999999999999999 6789


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++++|||++.......   .....++..|+|||.+....+ +.++|+||||+++|+|+ +|..||.....      +...
T Consensus       189 ~kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~------~~~~  258 (320)
T 3a99_A          189 LKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV-CGDIPFEHDEE------IIRG  258 (320)
T ss_dssp             EEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHH-HSSCSCCSHHH------HHHC
T ss_pred             EEEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHH-HCCCCCCChhh------hhcc
Confidence            9999999987554321   234567889999999877665 67899999999999999 79999975321      1222


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                        ....+..+++++.+++.+||+.||++||++++++++
T Consensus       259 --~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          259 --QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             --CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             --cccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              223356788999999999999999999999999875

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.97  E-value=5.8e-32  Score=216.07  Aligned_cols=177  Identities=17%  Similarity=0.198  Sum_probs=140.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+++||+. |+|.+++..                ..+++..+..++.|++.||.|||+.|++||||||.||+++.++.++
T Consensus        90 ~lv~e~~~-~~L~~~~~~----------------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~k  152 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST----------------QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLK  152 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH----------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEE
T ss_pred             EEEEeccC-ccHHHHHhh----------------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEE
Confidence            37788887 699999975                2489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhh---------hhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy15108         98 ISLSGLSKDTYQKEYY---------KYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV  167 (223)
Q Consensus        98 l~df~~~~~~~~~~~~---------~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~  167 (223)
                      ++|||++.........         ......++..|+|||.+.. ..++.++|+||+|+++|+|+ +|..||.+.+....
T Consensus       153 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~  231 (353)
T 2b9h_A          153 VCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIFPGRDYRHQ  231 (353)
T ss_dssp             ECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHH-HSSCSCCCSSHHHH
T ss_pred             EEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHH-hCCCCCCCCCcHHH
Confidence            9999998765432111         1123467889999998754 66889999999999999999 79999998876554


Q ss_pred             HHHHHhCccc------------------------CC------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        168 LSQLESKKLC------------------------WK------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       168 ~~~~~~~~~~------------------------~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+......                        .+      ....+++++.+++.+||+.||.+||+++++++|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          232 LLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             HHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            4433221000                        00      013578889999999999999999999999875

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.97  E-value=5.8e-32  Score=216.27  Aligned_cols=172  Identities=17%  Similarity=0.230  Sum_probs=137.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .++|+|+. |+|.+++.                 ..+++..+..++.||+.||.|||+.|++|+||+|.||+++.++.++
T Consensus       105 ~lv~e~~~-~~l~~~~~-----------------~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~k  166 (353)
T 3coi_A          105 YLVMPFMQ-TDLQKIMG-----------------LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELK  166 (353)
T ss_dssp             EEEEECCS-EEGGGTTT-----------------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEE
T ss_pred             EEEecccc-CCHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEE
Confidence            46778877 68887773                 2489999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++......    .....++..|+|||.+.+ ..++.++|+||+|+++|+|+ +|..||.+.+.......+.....
T Consensus       167 l~Dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~~~~~~~i~~~~~  241 (353)
T 3coi_A          167 ILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML-TGKTLFKGKDYLDQLTQILKVTG  241 (353)
T ss_dssp             ECSTTCTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHH-HSSCSSBSSCHHHHHHHHHHHHC
T ss_pred             EeecccccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHhC
Confidence            9999998754322    234567889999999876 56889999999999999999 79999998876655544432100


Q ss_pred             -----------------------------cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 -----------------------------CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 -----------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                                   ........++++.+++.+||+.||.+||+++++++|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          242 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             BCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                                         011224568899999999999999999999999875

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.97  E-value=3.5e-32  Score=214.27  Aligned_cols=177  Identities=17%  Similarity=0.218  Sum_probs=140.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee-cCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~-~~~~~   96 (223)
                      .+|+||+. |+|.++++.                .++++..++.++.|+++||.|||+.|++|+||||+||+++ .++.+
T Consensus        98 ~lv~e~~~-~~L~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~  160 (320)
T 2i6l_A           98 YIVQEYME-TDLANVLEQ----------------GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVL  160 (320)
T ss_dssp             EEEEECCS-EEHHHHHTT----------------CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEE
T ss_pred             eEEeeccC-CCHHHHhhc----------------CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeE
Confidence            37889987 699999953                3589999999999999999999999999999999999998 45689


Q ss_pred             EEcCCCCCcccchhh--hhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +++|||++.......  ........++..|+|||.+.. ..++.++|+||||+++|+|+ +|..||.+....+....+..
T Consensus       161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~~~~~~~~~~  239 (320)
T 2i6l_A          161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML-TGKTLFAGAHELEQMQLILE  239 (320)
T ss_dssp             EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHH
T ss_pred             EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHH
Confidence            999999987653221  111223455788999998765 56889999999999999999 79999998887665555433


Q ss_pred             Cccc-----------------------C-----CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLC-----------------------W-----KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~-----------------------~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....                       .     .....++.++.+++.+||+.||.+||+++++++|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            2110                       0     0124578899999999999999999999999875

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.97  E-value=9.8e-32  Score=211.71  Aligned_cols=177  Identities=14%  Similarity=0.221  Sum_probs=133.1

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~~~   96 (223)
                      .+||||+ ++.+..+.....              ..+++..+..++.|+++||.|||+. |++|+||+|.||+++.++.+
T Consensus       100 ~lv~e~~-~~~~~~l~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~  164 (318)
T 2dyl_A          100 FIAMELM-GTCAEKLKKRMQ--------------GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQI  164 (318)
T ss_dssp             EEEECCC-SEEHHHHHHHHT--------------SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCE
T ss_pred             EEEEecc-CCcHHHHHHHhc--------------cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCE
Confidence            3788998 555655555432              3699999999999999999999995 99999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCC-CHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDL-SDDQVLSQ  170 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~-~~~~~~~~  170 (223)
                      +++|||++.......  ......++..|+|||.+.     ...++.++||||+|+++|+|+ +|..||... ........
T Consensus       165 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~~  241 (318)
T 2dyl_A          165 KLCDFGISGRLVDDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA-TGQFPYKNCKTDFEVLTK  241 (318)
T ss_dssp             EECCCTTC----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHH-HSSCTTTTCCSHHHHHHH
T ss_pred             EEEECCCchhccCCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHH-hCCCCCCCCCccHHHHHH
Confidence            999999986543322  123346788899999984     455788999999999999999 699999864 44455555


Q ss_pred             HHhCcc-cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        171 LESKKL-CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       171 ~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +..... ..+....++.++.+++.+||+.||.+||++++++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          242 VLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             HHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             HhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            544422 222234678999999999999999999999999875

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=5.9e-32  Score=220.02  Aligned_cols=187  Identities=17%  Similarity=0.203  Sum_probs=131.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeee----ecC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI----SSD   93 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~----~~~   93 (223)
                      .+|+||+. |+|.+++...+.....      .....+++..++.++.||+.||.|||+.|++||||||.||++    +..
T Consensus        96 ~lv~e~~~-~~l~~~~~~~~~~~~~------~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~  168 (405)
T 3rgf_A           96 WLLFDYAE-HDLWHIIKFHRASKAN------KKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER  168 (405)
T ss_dssp             EEEEECCS-EEHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTT
T ss_pred             EEEEeCCC-CCHHHHHHHhcccccc------ccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCC
Confidence            36788876 6899998765431100      112359999999999999999999999999999999999999    667


Q ss_pred             CCeEEcCCCCCcccchhh--hhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-----
Q psy15108         94 LSVKISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD-----  165 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~-----  165 (223)
                      +.++|+|||++.......  ........+++.|+|||.+.+. .++.++||||+||++|+|+ +|..||.+....     
T Consensus       169 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~  247 (405)
T 3rgf_A          169 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSN  247 (405)
T ss_dssp             TCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHH-HSSCTTCCCC------C
T ss_pred             CcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHH-hCCCCCCCccccccccc
Confidence            899999999997654321  1223446778999999998774 4899999999999999999 799999755431     


Q ss_pred             ----HHHHHHHhCcccC------------------------------------CCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy15108        166 ----QVLSQLESKKLCW------------------------------------KHSSKTPEYITSLHEKCIHPHPHQRPT  205 (223)
Q Consensus       166 ----~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps  205 (223)
                          ..+..+......+                                    ......+..+.+|+.+||+.||.+|||
T Consensus       248 ~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~t  327 (405)
T 3rgf_A          248 PYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT  327 (405)
T ss_dssp             CCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCC
T ss_pred             cchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCC
Confidence                2222221100000                                    001122567889999999999999999


Q ss_pred             HHHHHHH
Q psy15108        206 FPSIVTQ  212 (223)
Q Consensus       206 ~~~ll~~  212 (223)
                      ++|+++|
T Consensus       328 a~e~L~h  334 (405)
T 3rgf_A          328 SEQAMQD  334 (405)
T ss_dssp             HHHHHTS
T ss_pred             HHHHhcC
Confidence            9999976

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=3.3e-33  Score=227.90  Aligned_cols=172  Identities=14%  Similarity=0.115  Sum_probs=135.7

Q ss_pred             CCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcC
Q psy15108         21 GKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL  100 (223)
Q Consensus        21 ~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~d  100 (223)
                      +.++.+++|.++++.....        ......+++..++.++.|+++||.|||++|++||||||+||+++.++.+||+|
T Consensus       183 ~~~~~~~~L~~ll~~l~~~--------~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~D  254 (413)
T 3dzo_A          183 LYPRMQSNLQTFGEVLLSH--------SSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTG  254 (413)
T ss_dssp             EEECCSEEHHHHHHHHHHH--------TTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECC
T ss_pred             EeehhcCCHHHHHHHhhcc--------cccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEe
Confidence            3445779999999643210        01224688999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccchhhhhhhhcCCccccccccccc----------ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy15108        101 SGLSKDTYQKEYYKYRNAILPLRWLPYEAV----------FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ  170 (223)
Q Consensus       101 f~~~~~~~~~~~~~~~~~~~~~~~~~pe~~----------~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~  170 (223)
                      ||+++.....    .....+ +.|+|||.+          ....++.++|||||||++|+|+ +|+.||...........
T Consensus       255 FG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell-tg~~Pf~~~~~~~~~~~  328 (413)
T 3dzo_A          255 FEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW-CADLPNTDDAALGGSEW  328 (413)
T ss_dssp             GGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH-HSSCCCCTTGGGSCSGG
T ss_pred             ccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH-HCCCCCCCcchhhhHHH
Confidence            9998754332    233455 889999998          4555788999999999999999 69999987655433222


Q ss_pred             HHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +      ......+++++.+++.+||+.||++||++.+++++
T Consensus       329 ~------~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          329 I------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  364 (413)
T ss_dssp             G------GSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             H------HhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            2      22234678999999999999999999998777543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.97  E-value=8.1e-32  Score=221.03  Aligned_cols=184  Identities=20%  Similarity=0.303  Sum_probs=130.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC----
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD----   93 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~----   93 (223)
                      .+|+|||. |+|.+++...+...        ......++..++.++.||+.||.|||+.|++||||||+||+++..    
T Consensus        85 ~lv~E~~~-gsL~~~l~~~~~~~--------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~  155 (434)
T 2rio_A           85 YIALELCN-LNLQDLVESKNVSD--------ENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFT  155 (434)
T ss_dssp             EEEECCCS-EEHHHHHHTC--------------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHH
T ss_pred             EEEEecCC-CCHHHHHhccCCCc--------hhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccc
Confidence            37899995 69999998654300        000112344567899999999999999999999999999999754    


Q ss_pred             ---------CCeEEcCCCCCcccchhhh---hhhhcCCccccccccccccc-------CCCCcccchHHHHHHHHHHHhC
Q psy15108         94 ---------LSVKISLSGLSKDTYQKEY---YKYRNAILPLRWLPYEAVFD-------DEFSTKSDVYAYACLIWEIFNK  154 (223)
Q Consensus        94 ---------~~~~l~df~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~-------~~~~~~~Di~slG~il~~l~~~  154 (223)
                               +.++++|||++........   .......+++.|+|||.+.+       ..++.++||||+||++|+|++.
T Consensus       156 ~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~  235 (434)
T 2rio_A          156 ADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK  235 (434)
T ss_dssp             SCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhC
Confidence                     4799999999976543321   11234578899999999865       5688999999999999999955


Q ss_pred             CCCCCCCCCHHHHHHHHHhCcccCCCC-----CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        155 GEMPFPDLSDDQVLSQLESKKLCWKHS-----SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       155 ~~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      |..||.......  ..+..........     ..++.++.+++.+||+.||.+||++.++++|
T Consensus       236 g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  296 (434)
T 2rio_A          236 GKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH  296 (434)
T ss_dssp             SCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence            999997655433  2222222222211     1245789999999999999999999999864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.97  E-value=7.5e-32  Score=212.05  Aligned_cols=169  Identities=17%  Similarity=0.269  Sum_probs=140.3

Q ss_pred             CCCCCCC-CCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee-cCC
Q psy15108         17 KSGSGKP-RVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDL   94 (223)
Q Consensus        17 ~~~v~~~-~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~-~~~   94 (223)
                      ..++++| +.+++|.+++...+               .+++..++.++.|+++||.|||+.|++|+||+|.||+++ .++
T Consensus       113 ~~~v~e~~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~  177 (312)
T 2iwi_A          113 FMLVLERPLPAQDLFDYITEKG---------------PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG  177 (312)
T ss_dssp             CEEEEECCSSEEEHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTT
T ss_pred             EEEEEEecCCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCC
Confidence            4477888 78999999998754               499999999999999999999999999999999999999 788


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFS-TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      .++++|||++.......   .....++..|++||.+....+. .++|+||+|+++|+++ +|..||....  .    +..
T Consensus       178 ~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~--~----~~~  247 (312)
T 2iwi_A          178 CAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMV-CGDIPFERDQ--E----ILE  247 (312)
T ss_dssp             EEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHH-HSSCSCCSHH--H----HHH
T ss_pred             eEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHH-HCCCCCCChH--H----Hhh
Confidence            99999999987554322   2345678889999998766654 5899999999999999 6999997532  1    122


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .  ....+..++..+.+++.+||+.||++||++++++++
T Consensus       248 ~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          248 A--ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             T--CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             h--ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            2  233456788999999999999999999999999875

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.97  E-value=8.5e-32  Score=220.62  Aligned_cols=180  Identities=19%  Similarity=0.284  Sum_probs=131.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec-----
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-----   92 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~-----   92 (223)
                      .+|||||. |+|.+++.....              .+++..+..++.||++||.|||+.|++||||||+||+++.     
T Consensus        94 ~lv~E~~~-g~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~  158 (432)
T 3p23_A           94 YIAIELCA-ATLQEYVEQKDF--------------AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHG  158 (432)
T ss_dssp             EEEEECCS-EEHHHHHHSSSC--------------CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTT
T ss_pred             EEEEECCC-CCHHHHHHhcCC--------------CccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCC
Confidence            37788886 699999986543              3555567899999999999999999999999999999953     


Q ss_pred             CCCeEEcCCCCCcccchhh--hhhhhcCCcccccccccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy15108         93 DLSVKISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV  167 (223)
Q Consensus        93 ~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~  167 (223)
                      ...++++|||++.......  ........+++.|+|||.+.   ...++.++||||+||++|+|++.|..||........
T Consensus       159 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~  238 (432)
T 3p23_A          159 KIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA  238 (432)
T ss_dssp             BCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH
T ss_pred             ceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH
Confidence            2357899999987654322  12234467899999999987   355678999999999999999559999976555443


Q ss_pred             HHHHHhCcccCCC-CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        168 LSQLESKKLCWKH-SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       168 ~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...+......... ....+..+.+++.+||+.||.+||+++++++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h  284 (432)
T 3p23_A          239 NILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH  284 (432)
T ss_dssp             HHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence            3322222111111 12235668899999999999999999999854

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.97  E-value=1.2e-31  Score=212.31  Aligned_cols=180  Identities=14%  Similarity=0.244  Sum_probs=122.3

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCCCCCeeeecCCCeE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~~~nil~~~~~~~~   97 (223)
                      +|+||+.+ +|.+++.....          .....+++..+..++.|++.||.|||+. |++|+||+|.||+++.++.++
T Consensus        98 lv~e~~~~-~l~~~~~~~~~----------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~k  166 (327)
T 3aln_A           98 ICMELMST-SFDKFYKYVYS----------VLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIK  166 (327)
T ss_dssp             EEECCCSE-EHHHHHHHHHH----------TTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEE
T ss_pred             EEEeecCC-ChHHHHHHHHh----------hhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEE
Confidence            77888885 88888875322          0124689999999999999999999999 999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccc----ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAV----FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLE  172 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~----~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~~~~  172 (223)
                      ++|||++.......  ......++..|+|||.+    ....++.++||||||+++|+|+ +|..||...... .....+.
T Consensus       167 l~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~~~~  243 (327)
T 3aln_A          167 LCDFGISGQLVDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELA-TGRFPYPKWNSVFDQLTQVV  243 (327)
T ss_dssp             ECCCSSSCC--------------------------------CCSHHHHHHHHHHHHHHH-HSCCCSSCC-------CCCC
T ss_pred             EccCCCceeccccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHH-HCCCCCCCcchHHHHHHHHh
Confidence            99999987654332  12233678889999998    4556889999999999999999 699999765432 2221111


Q ss_pred             hCccc---CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....   ......+++.+.+++.+||+.||.+||++++++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          244 KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence            11111   11123578999999999999999999999999875

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.97  E-value=3.1e-31  Score=207.50  Aligned_cols=159  Identities=14%  Similarity=0.258  Sum_probs=125.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec---C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---D   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~---~   93 (223)
                      ..+||||+.+|+|.+++...+.             ..+++..++.++.|++.||.|||+.|++|+||||.||+++.   +
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  156 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDRGD-------------QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPN  156 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHCTT-------------CCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTT
T ss_pred             EEEEEeecCCCcHHHHHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCC
Confidence            3478999999999999987543             46999999999999999999999999999999999999998   7


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +.++++|||++....                       +..++.++|+||+|+++|+|+ +|..||...........+..
T Consensus       157 ~~~kl~Dfg~a~~~~-----------------------~~~~~~~~DiwslG~il~el~-tg~~pf~~~~~~~~~~~~~~  212 (299)
T 3m2w_A          157 AILKLTDFGFAKETT-----------------------GEKYDKSCDMWSLGVIMYILL-CGYPPFYSNHGLAISPGMKT  212 (299)
T ss_dssp             CCEEECCCTTCEECT-----------------------TCGGGGHHHHHHHHHHHHHHH-HSSCSCCC-------CCSCC
T ss_pred             CcEEEeccccccccc-----------------------cccCCchhhHHHHHHHHHHHH-HCCCCCCCCcchhhhHHHHH
Confidence            889999999885321                       133577899999999999999 79999977654433221111


Q ss_pred             Ccc--cCCCC----CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKL--CWKHS----SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~--~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...  ....+    ..+++++.+++.+||+.||.+||+++++++|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          213 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             SSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            101  01111    4578899999999999999999999999976

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.97  E-value=4.2e-30  Score=218.26  Aligned_cols=189  Identities=18%  Similarity=0.221  Sum_probs=143.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC-
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~-   95 (223)
                      ..+|+||+.+|+|.+++.....            ...+++..++.++.|++.||.|||+.|++|+||+|.||+++.++. 
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~------------~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~  160 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFEN------------CCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQR  160 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSC------------TTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSS
T ss_pred             EEEEEEeCCCCCHHHHHHhccc------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCc
Confidence            4589999999999999986432            235899999999999999999999999999999999999997655 


Q ss_pred             --eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH-----
Q psy15108         96 --VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL-----  168 (223)
Q Consensus        96 --~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~-----  168 (223)
                        ++++|||++.......  ......++..|+|||.+.+..++.++||||+|+++|+++ +|..||........+     
T Consensus       161 ~~vKL~DFG~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLl-tG~~Pf~~~~~~~~~~~~i~  237 (676)
T 3qa8_A          161 LIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECI-TGFRPFLPNWQPVQWHGKVR  237 (676)
T ss_dssp             CEEEECSCCCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHH-SSCSSCCSSCHHHHSSTTCC
T ss_pred             eeEEEccccccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHH-HCCCCCCcccchhhhhhhhh
Confidence              8999999997654332  223457789999999999889999999999999999999 899999764332110     


Q ss_pred             ----HHHH-----hCcccC--------CCCCCChHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHHHhhhc
Q psy15108        169 ----SQLE-----SKKLCW--------KHSSKTPEYITSLHEKCIHPHPHQRPTFPS-----IVTQLSDAMCND  220 (223)
Q Consensus       169 ----~~~~-----~~~~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~-----ll~~L~~~~~~~  220 (223)
                          ..+.     .+...+        .....+++.+.+++..||..||.+||++++     ..+.+..++...
T Consensus       238 ~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k  311 (676)
T 3qa8_A          238 EKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK  311 (676)
T ss_dssp             ------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred             cccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence                0000     000000        112235788999999999999999999988     456666666544

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.95  E-value=1e-28  Score=192.10  Aligned_cols=155  Identities=12%  Similarity=0.126  Sum_probs=122.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+++|.++++.                 .....++..++.|+++||.|||++|++||||||.||+++.++.++
T Consensus       107 ~lv~e~~~g~~L~~~l~~-----------------~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~k  169 (286)
T 3uqc_A          107 LVVAEWIRGGSLQEVADT-----------------SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVV  169 (286)
T ss_dssp             EEEEECCCEEEHHHHHTT-----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEE
T ss_pred             EEEEEecCCCCHHHHHhc-----------------CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEE
Confidence            388999999999999952                 145667899999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHH---HHHhC
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS---QLESK  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~---~~~~~  174 (223)
                      +++++.                     ++       .++.++||||||+++|+|+ +|..||.+........   .....
T Consensus       170 l~~~~~---------------------~~-------~~~~~~Di~slG~il~ell-tg~~Pf~~~~~~~~~~~~~~~~~~  220 (286)
T 3uqc_A          170 LAYPAT---------------------MP-------DANPQDDIRGIGASLYALL-VNRWPLPEAGVRSGLAPAERDTAG  220 (286)
T ss_dssp             ECSCCC---------------------CT-------TCCHHHHHHHHHHHHHHHH-HSEECSCCCSBCCCSEECCBCTTS
T ss_pred             EEeccc---------------------cC-------CCCchhHHHHHHHHHHHHH-HCCCCCCcCCcchhhHHHHHHhcc
Confidence            885432                     22       3678999999999999999 7999998765422110   00011


Q ss_pred             ccc--CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLC--WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ...  ......+++++.+++.+||+.||.+| |+.++++.|+++...
T Consensus       221 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          221 QPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             CCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence            010  01235678999999999999999999 999999999987643

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.95  E-value=2.1e-28  Score=210.96  Aligned_cols=168  Identities=15%  Similarity=0.076  Sum_probs=129.5

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+.+++|.+++..                 .+++..++.++.||++||.|||++|++||||||.||+++.+ .++
T Consensus       160 ~lv~E~~~g~~L~~~~~~-----------------~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~k  221 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ-----------------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLK  221 (681)
T ss_dssp             EEEEECCCCEECC----C-----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEE
T ss_pred             EEEEEeCCCCcHHHHHhC-----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEE
Confidence            588999999999988753                 48999999999999999999999999999999999999875 899


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      |+|||++......     ....+++.|++||.+.+. ++.++|||||||++++|+ +|..||.+......        ..
T Consensus       222 l~DFG~a~~~~~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~-~g~~~~~~~~~~~~--------~~  286 (681)
T 2pzi_A          222 LIDLGAVSRINSF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALT-LDLPTRNGRYVDGL--------PE  286 (681)
T ss_dssp             ECCCTTCEETTCC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHH-SCCCEETTEECSSC--------CT
T ss_pred             EEecccchhcccC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHH-hCCCCCcccccccc--------cc
Confidence            9999998754322     345688999999998654 488999999999999999 78877764211000        00


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHHHhh
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPT-FPSIVTQLSDAMC  218 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps-~~~ll~~L~~~~~  218 (223)
                      .......++.+.+++.+||+.||.+||+ .+++...|..++.
T Consensus       287 ~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  328 (681)
T 2pzi_A          287 DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR  328 (681)
T ss_dssp             TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred             cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence            0000112467899999999999999996 5666666666543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.94  E-value=3.3e-28  Score=193.26  Aligned_cols=168  Identities=13%  Similarity=0.053  Sum_probs=127.3

Q ss_pred             CCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh-cCCcccCCCCCCCeeeecCC
Q psy15108         16 DKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS-DKRLIHKDIAARNCLISSDL   94 (223)
Q Consensus        16 ~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~i~H~di~~~nil~~~~~   94 (223)
                      ...+||||+.+|++.+.+..                ..+++..+..++.||+.||.||| +.|++||||||+||+++.++
T Consensus       136 ~~~lv~E~~~~g~ll~~~~~----------------~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~  199 (336)
T 2vuw_A          136 QLFIVLEFEFGGIDLEQMRT----------------KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTS  199 (336)
T ss_dssp             CEEEEEEEECCCEETGGGTT----------------TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECS
T ss_pred             eEEEEEEecCCCccHHHHHh----------------cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccC
Confidence            35599999999987776632                24899999999999999999999 99999999999999999887


Q ss_pred             --------------------CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHH-HHHHHh
Q psy15108         95 --------------------SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACL-IWEIFN  153 (223)
Q Consensus        95 --------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~i-l~~l~~  153 (223)
                                          .+||+|||+++....      ....++..|+|||.+.+.. +.++||||++++ .++++ 
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~-  271 (336)
T 2vuw_A          200 LKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRW-  271 (336)
T ss_dssp             CSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCT-
T ss_pred             CcceeeeccCccccccCCCceEEEeeccccEecCC------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccc-
Confidence                                899999999986543      2347889999999998666 889999998777 55566 


Q ss_pred             CCCCCCCCCCH-HHHHHHHHhC-cccCCC----CCCChHHHHHHHHHhcCCCCCCCCCHHHHH-HH
Q psy15108        154 KGEMPFPDLSD-DQVLSQLESK-KLCWKH----SSKTPEYITSLHEKCIHPHPHQRPTFPSIV-TQ  212 (223)
Q Consensus       154 ~~~~p~~~~~~-~~~~~~~~~~-~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll-~~  212 (223)
                      .|..||.+... ......+... ......    ...+++++.+++.+||+.|     |++|++ +|
T Consensus       272 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~H  332 (336)
T 2vuw_A          272 GEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQH  332 (336)
T ss_dssp             TSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred             cccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcC
Confidence            68888853211 1122222211 111111    1235788999999999977     899988 54

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.89  E-value=5.2e-25  Score=185.79  Aligned_cols=115  Identities=11%  Similarity=-0.008  Sum_probs=80.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      -+||||++||+|.++|+..+               ++++.   .|+.||+.||.|+|++||+||||||.|||++.++.+|
T Consensus       318 yLVMEyv~G~~L~d~i~~~~---------------~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vK  379 (569)
T 4azs_A          318 WLVMEKLPGRLLSDMLAAGE---------------EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHAR  379 (569)
T ss_dssp             EEEEECCCSEEHHHHHHTTC---------------CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEE
T ss_pred             EEEEecCCCCcHHHHHHhCC---------------CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEE
Confidence            39999999999999998643               47765   4789999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF  152 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~  152 (223)
                      |+|||+++....... ......+++.|++||.+.+ .+..++|+|++|++++++.
T Consensus       380 L~DFGlAr~~~~~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~  432 (569)
T 4azs_A          380 LIDFGSIVTTPQDCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLP  432 (569)
T ss_dssp             ECCCTTEESCC---C-CSHHHHHHHHHHHHHHC------------------CCCC
T ss_pred             EeecccCeeCCCCCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhc
Confidence            999999976543321 2234568899999999865 4567899999999876654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.70  E-value=1.5e-18  Score=145.64  Aligned_cols=117  Identities=13%  Similarity=0.062  Sum_probs=94.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.++++.                       +..++.|+++||.|||+++++||||||+||+++.  .+
T Consensus       414 ~~lVmE~~~ggsL~~~l~~-----------------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~  468 (540)
T 3en9_A          414 KRIMMSYINGKLAKDVIED-----------------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DL  468 (540)
T ss_dssp             TEEEEECCCSEEHHHHSTT-----------------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SE
T ss_pred             cEEEEECCCCCCHHHHHHH-----------------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eE
Confidence            4488999999999999951                       5689999999999999999999999999999998  99


Q ss_pred             EEcCCCCCcccchhhhh------hhhcCCccccccccccccc--CCCCcccchHHHHHHHHHHHhCCCCCC
Q psy15108         97 KISLSGLSKDTYQKEYY------KYRNAILPLRWLPYEAVFD--DEFSTKSDVYAYACLIWEIFNKGEMPF  159 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~~l~~~~~~p~  159 (223)
                      +++|||+++........      ......+++.|++||.+..  ..|+...|+|+..+-..+.. ..+.+|
T Consensus       469 kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v-~~r~rY  538 (540)
T 3en9_A          469 YIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDV-ERRARY  538 (540)
T ss_dssp             EECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHH-HTCSCC
T ss_pred             EEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHH-Hhcccc
Confidence            99999999876543211      2245678899999999876  55777889999887766655 344333

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.51  E-value=1.3e-15  Score=117.94  Aligned_cols=66  Identities=12%  Similarity=0.075  Sum_probs=57.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+++|+|.+ +.                   .  .....++.|+++|+.|||+.|++||||||.||+++ ++.++
T Consensus       176 ~lvmE~~~g~~L~~-l~-------------------~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vk  232 (282)
T 1zar_A          176 AVLMELIDAKELYR-VR-------------------V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIW  232 (282)
T ss_dssp             EEEEECCCCEEGGG-CC-------------------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEE
T ss_pred             EEEEEecCCCcHHH-cc-------------------h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEE
Confidence            48899999999988 42                   1  12346999999999999999999999999999999 99999


Q ss_pred             EcCCCCCcc
Q psy15108         98 ISLSGLSKD  106 (223)
Q Consensus        98 l~df~~~~~  106 (223)
                      ++|||+++.
T Consensus       233 l~DFG~a~~  241 (282)
T 1zar_A          233 IIDFPQSVE  241 (282)
T ss_dssp             ECCCTTCEE
T ss_pred             EEECCCCeE
Confidence            999999863

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.27  E-value=1.2e-12  Score=99.87  Aligned_cols=69  Identities=13%  Similarity=0.054  Sum_probs=57.4

Q ss_pred             CCCCCCCC-C----ChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh-cCCcccCCCCCCCeeeec
Q psy15108         19 GSGKPRVK-G----DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS-DKRLIHKDIAARNCLISS   92 (223)
Q Consensus        19 ~v~~~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~i~H~di~~~nil~~~   92 (223)
                      +||||+.+ |    +|.++...                  .++..+..++.|++.|+.+|| +.|++||||||.||+++.
T Consensus       145 lVmE~~g~~g~~~~~L~~~~~~------------------~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~  206 (258)
T 1zth_A          145 LLMEFIGEDELPAPTLVELGRE------------------LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID  206 (258)
T ss_dssp             EEEECCEETTEECCBHHHHGGG------------------GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS
T ss_pred             EEEEecCCCCCccccHHHHhhc------------------cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC
Confidence            78999943 4    67665421                  335567889999999999999 999999999999999988


Q ss_pred             CCCeEEcCCCCCccc
Q psy15108         93 DLSVKISLSGLSKDT  107 (223)
Q Consensus        93 ~~~~~l~df~~~~~~  107 (223)
                        .++++|||++...
T Consensus       207 --~~~liDFG~a~~~  219 (258)
T 1zth_A          207 --KVYFIDMGQAVTL  219 (258)
T ss_dssp             --SEEECCCTTCEET
T ss_pred             --cEEEEECcccccC
Confidence              8999999998643

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.93  E-value=1.3e-10  Score=92.92  Aligned_cols=68  Identities=13%  Similarity=0.010  Sum_probs=55.7

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC----
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL----   94 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~----   94 (223)
                      +||||+.+++|.++..                     ......++.|++.++.+||+.|++||||||.|||++.++    
T Consensus       188 LVME~i~G~~L~~l~~---------------------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d  246 (397)
T 4gyi_A          188 IVMSLVDALPMRQVSS---------------------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAED  246 (397)
T ss_dssp             EEEECCSCEEGGGCCC---------------------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSC
T ss_pred             EEEEecCCccHhhhcc---------------------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCccc
Confidence            7999999998865431                     123456789999999999999999999999999998776    


Q ss_pred             ------CeEEcCCCCCccc
Q psy15108         95 ------SVKISLSGLSKDT  107 (223)
Q Consensus        95 ------~~~l~df~~~~~~  107 (223)
                            .+.++||+-+...
T Consensus       247 ~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          247 PSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             TTSEEEEEEECCCTTCEET
T ss_pred             ccccccceEEEEeCCcccC
Confidence                  3789999877543

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=98.43  E-value=6.3e-06  Score=60.20  Aligned_cols=143  Identities=10%  Similarity=0.097  Sum_probs=93.9

Q ss_pred             CCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCCeEEcCCCCC
Q psy15108         26 KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLS  104 (223)
Q Consensus        26 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~~~l~df~~~  104 (223)
                      .=||.++|+..+.              +++++++|.+++|.+.+|.-+-. ..-...-+.+..|++..+|.+.+.+- .+
T Consensus        32 ~vSL~eIL~~~~~--------------PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~~-~s   96 (229)
T 2yle_A           32 ALSLEEILRLYNQ--------------PINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAPA-AD   96 (229)
T ss_dssp             EEEHHHHHHHHTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECCC---
T ss_pred             cccHHHHHHHcCC--------------CcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceecccc-cc
Confidence            3479999998765              89999999999999999887621 11123445678899999999987741 11


Q ss_pred             cccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccCCCCCCC
Q psy15108        105 KDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKT  184 (223)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (223)
                      .             .....+.+||... ...+.+.-|||+|+++|.-+-.|-.                    ......+
T Consensus        97 ~-------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~--------------------e~eE~eL  142 (229)
T 2yle_A           97 D-------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK--------------------ENEEREL  142 (229)
T ss_dssp             -----------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC--------------------TTEEECC
T ss_pred             c-------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC--------------------cccchhh
Confidence            0             0112245776642 3445677899999999988832221                    1123456


Q ss_pred             hHHHHHHHHHhcCC-------------------------CCCCCCCHHHHHHHHHHHh
Q psy15108        185 PEYITSLHEKCIHP-------------------------HPHQRPTFPSIVTQLSDAM  217 (223)
Q Consensus       185 ~~~~~~li~~~l~~-------------------------dp~~Rps~~~ll~~L~~~~  217 (223)
                      ++.+.+||..|...                         .+..|+++++|++.=..-+
T Consensus       143 S~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~hl  200 (229)
T 2yle_A          143 SPPLEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAAHL  200 (229)
T ss_dssp             CHHHHHHHHHHTTCCC--------------------CCSCCCCCCSHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHhcccccccccccccccccccccccccccccCcCCHHHHHHHHHhhc
Confidence            78888888888755                         3467899999987654433

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.07  E-value=9.8e-07  Score=66.94  Aligned_cols=67  Identities=9%  Similarity=-0.109  Sum_probs=51.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-----------------------
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-----------------------   75 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-----------------------   75 (223)
                      ++|++++|.+|.+.+.                    +......++.++.+++..||+                       
T Consensus        87 lv~e~i~G~~l~~~~~--------------------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~  146 (263)
T 3tm0_A           87 LLMSEADGVLCSEEYE--------------------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLL  146 (263)
T ss_dssp             EEEECCSSEEHHHHCC--------------------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHH
T ss_pred             EEEEecCCeehhhccC--------------------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHH
Confidence            7899999999887631                    122234677888888888887                       


Q ss_pred             ------------------------------------CCcccCCCCCCCeeeecCCCeEEcCCCCCc
Q psy15108         76 ------------------------------------KRLIHKDIAARNCLISSDLSVKISLSGLSK  105 (223)
Q Consensus        76 ------------------------------------~~i~H~di~~~nil~~~~~~~~l~df~~~~  105 (223)
                                                          ..++|+|+++.||+++....+.++||+.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          147 NNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             HTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             hccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                                448899999999999875556799999774

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.84  E-value=2.3e-06  Score=66.43  Aligned_cols=30  Identities=23%  Similarity=0.226  Sum_probs=25.4

Q ss_pred             CcccCCCCCCCeeeec--CCCeEEcCCCCCcc
Q psy15108         77 RLIHKDIAARNCLISS--DLSVKISLSGLSKD  106 (223)
Q Consensus        77 ~i~H~di~~~nil~~~--~~~~~l~df~~~~~  106 (223)
                      .++|+|+++.||+++.  ...+.++||+.+..
T Consensus       192 ~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          192 CLIHNDFSSDHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             EEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence            4799999999999998  45578999998754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.77  E-value=8e-06  Score=64.87  Aligned_cols=71  Identities=10%  Similarity=-0.005  Sum_probs=56.0

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-----------------------
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-----------------------   75 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-----------------------   75 (223)
                      +||++++|.++.+..                 ...++..+...++.++++.|..||+                       
T Consensus       118 ~vme~v~G~~l~~~~-----------------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~  180 (359)
T 3dxp_A          118 YIMEFVSGRVLWDQS-----------------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIE  180 (359)
T ss_dssp             EEEECCCCBCCCCTT-----------------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHH
T ss_pred             EEEEecCCeecCCCc-----------------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHH
Confidence            688899887764311                 1246788888889999999999986                       


Q ss_pred             -----------------------------------CCcccCCCCCCCeeeecCCC--eEEcCCCCCcc
Q psy15108         76 -----------------------------------KRLIHKDIAARNCLISSDLS--VKISLSGLSKD  106 (223)
Q Consensus        76 -----------------------------------~~i~H~di~~~nil~~~~~~--~~l~df~~~~~  106 (223)
                                                         .+++|+|+++.||+++.++.  +.++||+.+..
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          181 RWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                               36899999999999987653  58999998864

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.30  E-value=0.00021  Score=53.62  Aligned_cols=28  Identities=14%  Similarity=0.093  Sum_probs=24.6

Q ss_pred             cccCCCCCCCeeeecCCCeEEcCCCCCc
Q psy15108         78 LIHKDIAARNCLISSDLSVKISLSGLSK  105 (223)
Q Consensus        78 i~H~di~~~nil~~~~~~~~l~df~~~~  105 (223)
                      ++|+|++|.||+++.++.+.++||+.+.
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhcc
Confidence            8999999999999876556799999875

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.58  E-value=0.0027  Score=49.11  Aligned_cols=30  Identities=27%  Similarity=0.253  Sum_probs=24.6

Q ss_pred             CcccCCCCCCCeeeec---CCC-eEEcCCCCCcc
Q psy15108         77 RLIHKDIAARNCLISS---DLS-VKISLSGLSKD  106 (223)
Q Consensus        77 ~i~H~di~~~nil~~~---~~~-~~l~df~~~~~  106 (223)
                      .++|+|+++.||+++.   ++. +.++||+.+..
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            5699999999999987   355 47999997753

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=95.97  E-value=0.011  Score=46.06  Aligned_cols=31  Identities=16%  Similarity=0.192  Sum_probs=27.5

Q ss_pred             cCCcccCCCCCCCeeeecCCCeEEcCCCCCc
Q psy15108         75 DKRLIHKDIAARNCLISSDLSVKISLSGLSK  105 (223)
Q Consensus        75 ~~~i~H~di~~~nil~~~~~~~~l~df~~~~  105 (223)
                      ..+++|+|+++.||+++.++.+.++||+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            3679999999999999877889999999775

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.31  E-value=0.021  Score=46.20  Aligned_cols=33  Identities=18%  Similarity=0.265  Sum_probs=28.7

Q ss_pred             hcCCcccCCCCCCCeeeecCCCeEEcCCCCCccc
Q psy15108         74 SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  107 (223)
Q Consensus        74 H~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~  107 (223)
                      +...++|+|+++.||+++.++ +.++||+.+...
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence            567899999999999998776 999999988643

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=93.05  E-value=0.049  Score=40.89  Aligned_cols=29  Identities=14%  Similarity=0.100  Sum_probs=25.2

Q ss_pred             CcccCCCCCCCeeeecCCCeEEcCCCCCc
Q psy15108         77 RLIHKDIAARNCLISSDLSVKISLSGLSK  105 (223)
Q Consensus        77 ~i~H~di~~~nil~~~~~~~~l~df~~~~  105 (223)
                      .++|+|+++.||+++..+.+-|+||+.+.
T Consensus       194 ~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence            37899999999999987667799999875

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=92.94  E-value=0.075  Score=41.30  Aligned_cols=33  Identities=24%  Similarity=0.194  Sum_probs=27.6

Q ss_pred             cCCcccCCCCCCCeeeecC----CCeEEcCCCCCccc
Q psy15108         75 DKRLIHKDIAARNCLISSD----LSVKISLSGLSKDT  107 (223)
Q Consensus        75 ~~~i~H~di~~~nil~~~~----~~~~l~df~~~~~~  107 (223)
                      ...++|+|+.+.||+++.+    +.+.++||+.+...
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            4579999999999999874    67899999988643

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=92.73  E-value=0.15  Score=39.36  Aligned_cols=30  Identities=20%  Similarity=0.096  Sum_probs=25.2

Q ss_pred             cCCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         75 DKRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        75 ~~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      ...++|+|+++.||+++ + .+.++||+.+..
T Consensus       194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            34689999999999998 4 889999987753

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=91.80  E-value=0.057  Score=41.68  Aligned_cols=31  Identities=16%  Similarity=0.112  Sum_probs=26.2

Q ss_pred             CCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         76 KRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      .+++|+|+.+.||+++.+..+.++||+.+..
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhccC
Confidence            4789999999999998775567999998754

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=91.32  E-value=0.26  Score=39.23  Aligned_cols=31  Identities=19%  Similarity=0.228  Sum_probs=26.5

Q ss_pred             cCCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         75 DKRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        75 ~~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      ...++|+|+.+.||+++.+ .+.++||+.+..
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~  256 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFY  256 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence            5689999999999999765 589999988764

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=91.16  E-value=0.083  Score=41.41  Aligned_cols=32  Identities=16%  Similarity=0.027  Sum_probs=26.3

Q ss_pred             cCCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         75 DKRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        75 ~~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      ...++|+|+.+.||+++....+.++||+.+..
T Consensus       221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             CCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             CceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            45789999999999999644578999998753

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=91.04  E-value=0.22  Score=38.88  Aligned_cols=31  Identities=29%  Similarity=0.181  Sum_probs=27.1

Q ss_pred             CCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         76 KRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      ..++|+|+.+.||+++.++.+.++||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            4689999999999998877899999987753

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=90.64  E-value=0.36  Score=39.52  Aligned_cols=15  Identities=27%  Similarity=0.346  Sum_probs=14.1

Q ss_pred             CcccCCCCCCCeeee
Q psy15108         77 RLIHKDIAARNCLIS   91 (223)
Q Consensus        77 ~i~H~di~~~nil~~   91 (223)
                      .++|+|+.+.||+++
T Consensus       291 v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          291 VLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEECSCCCGGGEEEC
T ss_pred             eEEecCCCCCcEEee
Confidence            689999999999998

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=89.87  E-value=0.4  Score=37.76  Aligned_cols=30  Identities=13%  Similarity=0.129  Sum_probs=24.7

Q ss_pred             CCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         76 KRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      .+++|+|+.+.||+++.+ .+.++||..+..
T Consensus       212 ~~l~HgDl~~~Nil~~~~-~~~lID~e~a~~  241 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNK-CLRLIDFEYSGF  241 (369)
T ss_dssp             EEEECSCCCGGGEEECC--CEEECCCTTCEE
T ss_pred             eEEEeCCCCcccEEecCC-cEEEEEecCCCC
Confidence            368999999999999765 489999998764

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=89.45  E-value=0.48  Score=36.14  Aligned_cols=30  Identities=20%  Similarity=-0.028  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         76 KRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      ..++|+|+.+.||+ ..++.+.++||..+..
T Consensus       173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            35899999999999 5667789999998754

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=88.71  E-value=0.36  Score=39.09  Aligned_cols=30  Identities=13%  Similarity=0.145  Sum_probs=24.7

Q ss_pred             CcccCCCCCCCeeeecC----------------------------CCeEEcCCCCCcc
Q psy15108         77 RLIHKDIAARNCLISSD----------------------------LSVKISLSGLSKD  106 (223)
Q Consensus        77 ~i~H~di~~~nil~~~~----------------------------~~~~l~df~~~~~  106 (223)
                      .++|+|+.+.||+++.+                            +.+.++||..+..
T Consensus       250 v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~  307 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASY  307 (429)
T ss_dssp             EEECSCCCGGGEEEEC------------------------------CCEECCCTTCEE
T ss_pred             EEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCc
Confidence            68999999999999875                            6789999988764

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=86.53  E-value=0.39  Score=38.25  Aligned_cols=30  Identities=27%  Similarity=0.200  Sum_probs=26.6

Q ss_pred             CcccCCCCCCCeeeecC----CCeEEcCCCCCcc
Q psy15108         77 RLIHKDIAARNCLISSD----LSVKISLSGLSKD  106 (223)
Q Consensus        77 ~i~H~di~~~nil~~~~----~~~~l~df~~~~~  106 (223)
                      .++|+|+.+.||+++.+    +.+.++||..+..
T Consensus       221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             EEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             EEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            68999999999999876    6899999998864

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=83.88  E-value=0.56  Score=37.54  Aligned_cols=31  Identities=16%  Similarity=0.094  Sum_probs=25.2

Q ss_pred             CcccCCCCCCCeeee------cCCCeEEcCCCCCccc
Q psy15108         77 RLIHKDIAARNCLIS------SDLSVKISLSGLSKDT  107 (223)
Q Consensus        77 ~i~H~di~~~nil~~------~~~~~~l~df~~~~~~  107 (223)
                      .++|+|+.+.||++.      ....+.++||..+...
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n  281 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN  281 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccCC
Confidence            367999999999994      3467899999988643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	223
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	6e-33
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-32
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-32
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	8e-32
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-30
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-30
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-30
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-29
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-29
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-29
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-29
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-29
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-29
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-29
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	9e-29
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	9e-29
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-28
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-28
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-27
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-27
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-26
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-25
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-24
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-24
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	9e-23
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-22
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-22
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-21
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-20
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-20
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-19
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-19
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-18
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-18
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-18
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-18
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-18
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-17
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-17
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-17
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-17
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-17
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	9e-17
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-16
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-16
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	9e-16
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-15
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-15
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-15
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	6e-15
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	7e-15
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	9e-15
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-14
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-13
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-12
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-12
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	8e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-09
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	9e-09
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-08
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.004

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 6e-33
 Identities = 49/167 (29%), Positives = 87/167 (52%), Gaps = 1/167 (0%)

Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
                  T Q + M   V   +E++  K+ +H+D+AARNCL++    VK+S  GLS+   
Sbjct: 92  EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 151

Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             EY     +  P+RW P E +   +FS+KSD++A+  L+WEI++ G+MP+   ++ +  
Sbjct: 152 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 211

Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
             +  + L         E + ++   C H    +RPTF  +++ + D
Sbjct: 212 EHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 257

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  116 bits (292), Expect = 3e-32
 Identities = 62/197 (31%), Positives = 110/197 (55%), Gaps = 11/197 (5%)

Query: 27  GDLKQFLLATRK---------DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR 77
           GDL +FL +            D   ++    P    LS ++ + +A QVA G+ ++S+++
Sbjct: 101 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK 160

Query: 78  LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAILPLRWLPYEAVFDDEFS 136
            +H+D+A RNCL+  ++ VKI+  GLS++ Y  +YYK   N  +P+RW+P E++F + ++
Sbjct: 161 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYT 220

Query: 137 TKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCI 196
           T+SDV+AY  ++WEIF+ G  P+  ++ ++V+  +    +        P  + +L   C 
Sbjct: 221 TESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL-ACPENCPLELYNLMRLCW 279

Query: 197 HPHPHQRPTFPSIVTQL 213
              P  RP+F SI   L
Sbjct: 280 SKLPADRPSFCSIHRIL 296

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (293), Expect = 4e-32
 Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 9/196 (4%)

Query: 27  GDLKQFLLATRKD--------SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRL 78
           GDL  +L + R+            K    +  +  L+    +  AYQVA G+E +  K  
Sbjct: 126 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 185

Query: 79  IHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFST 137
           +H+D+AARN L++    VKI   GL++D      Y    NA LP++W+  E++F+  ++ 
Sbjct: 186 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 245

Query: 138 KSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIH 197
           KSDV++Y  L+WEIF+ G  P+P +  D    +L              E I  + + C  
Sbjct: 246 KSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWA 305

Query: 198 PHPHQRPTFPSIVTQL 213
               +RP+FP++ + L
Sbjct: 306 FDSRKRPSFPNLTSFL 321

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 8e-32
 Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 1/159 (0%)

Query: 57  SQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 116
            Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++     EY   +
Sbjct: 113 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 172

Query: 117 NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL 176
            A  P++W   EA     F+ KSDV+++  L+ E+  KG +P+P + + +VL Q+E +  
Sbjct: 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGY 231

Query: 177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
                 + PE +  L  +C    P +RPTF  +   L D
Sbjct: 232 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 270

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 1e-30
 Identities = 65/193 (33%), Positives = 109/193 (56%), Gaps = 3/193 (1%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           G+L+++L A R    + S +        LS+   V+ AYQVA G+E+++ K+ IH+D+AA
Sbjct: 104 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAA 163

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RN L++ D  +KI+  GL++D +  +YY K  N  LP++W+  EA+FD  ++ +SDV+++
Sbjct: 164 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 223

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             L+WEIF  G  P+P +  +++   L+         S     +  +   C H  P QRP
Sbjct: 224 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR-MDKPSNCTNELYMMMRDCWHAVPSQRP 282

Query: 205 TFPSIVTQLSDAM 217
           TF  +V  L   +
Sbjct: 283 TFKQLVEDLDRIV 295

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 5e-30
 Identities = 40/161 (24%), Positives = 85/161 (52%), Gaps = 1/161 (0%)

Query: 55  STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 114
           +    + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++     +Y  
Sbjct: 99  AAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 158

Query: 115 YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK 174
                 P++W   E      +S+KSDV+++  L+WE+F++G++P+ + S+ +V+  + + 
Sbjct: 159 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 218

Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
              +K       ++  +   C    P  RP F  ++ QL++
Sbjct: 219 FRLYK-PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE 258

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 5e-30
 Identities = 39/195 (20%), Positives = 85/195 (43%), Gaps = 23/195 (11%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
             L   L                        + + +A Q A G++++  K +IH+D+ + 
Sbjct: 88  SSLYHHLHIIET--------------KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSN 133

Query: 87  NCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVF---DDEFSTKSDVY 142
           N  +  DL+VKI   GL+    +    +++      + W+  E +     + +S +SDVY
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 193

Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW----KHSSKTPEYITSLHEKCIHP 198
           A+  +++E+   G++P+ ++++   +  +  +        K  S  P+ +  L  +C+  
Sbjct: 194 AFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKK 252

Query: 199 HPHQRPTFPSIVTQL 213
              +RP FP I+  +
Sbjct: 253 KRDERPLFPQILASI 267

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (272), Expect = 1e-29
 Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 1/168 (0%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 107
            P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++  
Sbjct: 100 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159

Query: 108 YQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
              EY     A  P++W   EA+    F+ KSDV+++  L+ EI   G +P+P +++ +V
Sbjct: 160 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219

Query: 168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           +  LE +          PE +  L   C    P  RPTF  + + L D
Sbjct: 220 IQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 2e-29
 Identities = 56/192 (29%), Positives = 101/192 (52%), Gaps = 4/192 (2%)

Query: 27  GDLKQFLLATRKDSKDKSGS-GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           G+L  FL  +R    D + +       +LS+ Q +  A  VA G++++S K+ IH+D+AA
Sbjct: 96  GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 155

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
           RN L+  +   KI+  GLS+   Q+ Y K     LP+RW+  E++    ++T SDV++Y 
Sbjct: 156 RNILVGENYVAKIADFGLSRG--QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 213

Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            L+WEI + G  P+  ++  ++  +L       +      + +  L  +C    P++RP+
Sbjct: 214 VLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-LEKPLNCDDEVYDLMRQCWREKPYERPS 272

Query: 206 FPSIVTQLSDAM 217
           F  I+  L+  +
Sbjct: 273 FAQILVSLNRML 284

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  109 bits (272), Expect = 2e-29
 Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 5/169 (2%)

Query: 55  STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQK 110
           +  Q V M   +A G+++++D   +H+D+AARN L++S+L  K+S  GLS+    DT   
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 185

Query: 111 EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
            Y       +P+RW   EA+   +F++ SDV++Y  ++WE+ + GE P+ D+++  V++ 
Sbjct: 186 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINA 245

Query: 171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
           +E +          P  +  L   C     + RP F  IV  L   + N
Sbjct: 246 IE-QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 3e-29
 Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 3/176 (1%)

Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
            + R +     + + +QV++G++++ +   +H+D+AARN L+ +    KIS  GLSK   
Sbjct: 99  QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 158

Query: 109 QKEYYKYRN--AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ 166
             E Y         P++W   E +   +FS+KSDV+++  L+WE F+ G+ P+  +   +
Sbjct: 159 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218

Query: 167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
           V + LE  +      +  P  +  L   C       RP F ++  +L +   + VN
Sbjct: 219 VTAMLEKGER-MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 273

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 3e-29
 Identities = 61/193 (31%), Positives = 111/193 (57%), Gaps = 7/193 (3%)

Query: 26  KGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           +GDLK +L + R    +      P +   S S+ + MA ++A G+ +++  + +H+D+AA
Sbjct: 107 RGDLKSYLRSLRPAMANN-----PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAA 161

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RNC+++ D +VKI   G+++D Y+ +YY+     +LP+RW+  E++ D  F+T SDV+++
Sbjct: 162 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 221

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             ++WEI    E P+  LS++QVL  +    L  K     P+ +  L   C   +P  RP
Sbjct: 222 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRP 280

Query: 205 TFPSIVTQLSDAM 217
           +F  I++ + + M
Sbjct: 281 SFLEIISSIKEEM 293

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 3e-29
 Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 1/168 (0%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R  SL  +  +  AYQ++  L ++  KR +H+DIAARN L+SS+  VK+   GLS+    
Sbjct: 101 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 160

Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             YYK     LP++W+  E++    F++ SDV+ +   +WEI   G  PF  + ++ V+ 
Sbjct: 161 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 220

Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
           ++E+ +         P  + SL  KC    P +RP F  +  QLS  +
Sbjct: 221 RIENGER-LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 267

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 3e-29
 Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 2/193 (1%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
           G+L  +L + R +      + +   +  L+    +  ++QVA G+E ++ ++ IH+D+AA
Sbjct: 103 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 162

Query: 86  RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
           RN L+S    VKI   GL++D Y+   Y +  +A LPL+W+  E +FD  ++ +SDV+++
Sbjct: 163 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 222

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
             L+WEIF+ G  P+P +  D+   +   +    +    T   +      C H  P QRP
Sbjct: 223 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 282

Query: 205 TFPSIVTQLSDAM 217
           TF  +V  L + +
Sbjct: 283 TFSELVEHLGNLL 295

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 9e-29
 Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 5/168 (2%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 107
                 L     +  +  V   +E++     +H+D+AARN L+S D   K+S  GL+K+ 
Sbjct: 94  SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 153

Query: 108 YQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
              +        LP++W   EA+ + +FSTKSDV+++  L+WEI++ G +P+P +    V
Sbjct: 154 SSTQD----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV 209

Query: 168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           + ++E K          P  +  + + C H     RP+F  +  QL  
Sbjct: 210 VPRVE-KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 256

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (269), Expect = 9e-29
 Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 2/161 (1%)

Query: 55  STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 114
            +   +    Q+A G+ ++ D+RL+H+D+AARN L+ +   VKI+  GL+K    +E   
Sbjct: 109 GSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168

Query: 115 YRNAI-LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
           +     +P++W+  E++    ++ +SDV++Y   +WE+   G  P+  +   ++ S LE 
Sbjct: 169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE- 227

Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
           K             +  +  KC       RP F  ++ + S
Sbjct: 228 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 1e-28
 Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 2/169 (1%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
                        A QVA G+ ++  KR IH+D+AARN L+++   VKI   GL +   Q
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163

Query: 110 KE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
            +  Y    +  +P  W   E++    FS  SD + +   +WE+F  G+ P+  L+  Q+
Sbjct: 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223

Query: 168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
           L +++ +          P+ I ++  +C    P  RPTF ++   L +A
Sbjct: 224 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 4e-28
 Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 17/191 (8%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           G L +FL+  R+               +  S    + +QV++G++++ +K  +H+D+AAR
Sbjct: 93  GPLHKFLVGKRE--------------EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAAR 138

Query: 87  NCLISSDLSVKISLSGLSKDTYQKEYYKYRN--AILPLRWLPYEAVFDDEFSTKSDVYAY 144
           N L+ +    KIS  GLSK     + Y         PL+W   E +   +FS++SDV++Y
Sbjct: 139 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 198

Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
              +WE  + G+ P+  +   +V++ +E  K   +   + P  + +L   C       RP
Sbjct: 199 GVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM-ECPPECPPELYALMSDCWIYKWEDRP 257

Query: 205 TFPSIVTQLSD 215
            F ++  ++  
Sbjct: 258 DFLTVEQRMRA 268

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 3e-27
 Identities = 50/169 (29%), Positives = 95/169 (56%), Gaps = 4/169 (2%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
              + +    +    QVA G++ ++ K+ +H+D+AARNC++    +VK++  GL++D Y 
Sbjct: 123 ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 182

Query: 110 KEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ 166
           KE+    N   A LP++W+  E++   +F+TKSDV+++  L+WE+  +G  P+PD++   
Sbjct: 183 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 242

Query: 167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
           +   L   +         P+ +  +  KC HP    RP+F  +V+++S 
Sbjct: 243 ITVYLLQGRRL-LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 290

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (256), Expect = 6e-27
 Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 4/195 (2%)

Query: 27  GDLKQFLLATRKD---SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
           GDL  FL   R     SK      +    +L     ++ +YQVA G+  ++ K  IH+D+
Sbjct: 112 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDL 171

Query: 84  AARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
           AARN L++     KI   GL++D      Y  +  A LP++W+  E++F+  ++ +SDV+
Sbjct: 172 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 231

Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
           +Y   +WE+F+ G  P+P +  D    ++  +          P  +  + + C    P +
Sbjct: 232 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 291

Query: 203 RPTFPSIVTQLSDAM 217
           RPTF  IV  +   +
Sbjct: 292 RPTFKQIVQLIEKQI 306

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 99.4 bits (247), Expect = 8e-26
 Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 1/166 (0%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 107
           +   + +S    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+  
Sbjct: 106 ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 165

Query: 108 YQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
               Y  +  A  P++W   E++  ++FS KSDV+A+  L+WEI   G  P+P +   QV
Sbjct: 166 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 225

Query: 168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
              LE K    +     PE +  L   C   +P  RP+F  I    
Sbjct: 226 YELLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.1 bits (246), Expect = 1e-25
 Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 3/166 (1%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
            S  Q V M   +A G++++++   +H+D+AARN L++S+L  K+S  GLS+        
Sbjct: 107 FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 166

Query: 114 KYR--NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
            Y      +P+RW   EA+   +F++ SDV+++  ++WE+   GE P+ +LS+ +V+  +
Sbjct: 167 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 226

Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
                        P  I  L  +C      +RP F  IV+ L   +
Sbjct: 227 N-DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 271

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.7 bits (235), Expect = 3e-24
 Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 6/161 (3%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           ++      +  T   ++A  L +   KR+IH+DI   N L+ S   +KI+  G S     
Sbjct: 99  KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 158

Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
                       L +LP E +       K D+++   L +E    G+ PF   +  +   
Sbjct: 159 SRRTTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV-GKPPFEANTYQETYK 214

Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
           ++   +  +       E    L  + +  +P QRP    ++
Sbjct: 215 RISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVL 253

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 6e-24
 Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 6/163 (3%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           R L+ SQ   +  Q    L ++ D ++IH+D+ A N L + D  +K++  G+S    +  
Sbjct: 105 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 164

Query: 112 YYKYRNAILPLRWLP----YEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
             +      P    P     E   D  +  K+DV++    + E+    E P  +L+  +V
Sbjct: 165 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE-IEPPHHELNPMRV 223

Query: 168 LSQ-LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
           L +  +S+       S+         +KC+  +   R T   +
Sbjct: 224 LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 266

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 91.6 bits (227), Expect = 9e-23
 Identities = 29/162 (17%), Positives = 62/162 (38%), Gaps = 9/162 (5%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
           + L   +   + +    GL ++    +IH+D+ A N L+S    VK+   G +       
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169

Query: 112 YYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
            +     +    W+  E +    + ++  K DV++      E+    + P  +++    L
Sbjct: 170 SF-----VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSAL 223

Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
             +   +     S    EY  +  + C+   P  RPT   ++
Sbjct: 224 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 265

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.8 bits (225), Expect = 1e-22
 Identities = 29/189 (15%), Positives = 75/189 (39%), Gaps = 19/189 (10%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-----RLIHK 81
           GDL   +    K+ +            L     + +  Q+ L L+    +      ++H+
Sbjct: 90  GDLASVITKGTKERQ-----------YLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR 138

Query: 82  DIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDV 141
           D+   N  +    +VK+   GL++     +    +  +    ++  E +    ++ KSD+
Sbjct: 139 DLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDI 197

Query: 142 YAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPH 201
           ++  CL++E+      PF   S  ++  ++   K   +   +  + +  +  + ++   +
Sbjct: 198 WSLGCLLYELCA-LMPPFTAFSQKELAGKIREGKFR-RIPYRYSDELNEIITRMLNLKDY 255

Query: 202 QRPTFPSIV 210
            RP+   I+
Sbjct: 256 HRPSVEEIL 264

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.8 bits (225), Expect = 2e-22
 Identities = 29/156 (18%), Positives = 60/156 (38%), Gaps = 3/156 (1%)

Query: 55  STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 114
              Q   +  +    LE +   ++IH+DI + N L+  D SVK++  G        E  K
Sbjct: 114 DEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA-QITPEQSK 172

Query: 115 YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK 174
               +    W+  E V    +  K D+++   +  E+   GE P+ + +  + L  + + 
Sbjct: 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIATN 231

Query: 175 KLC-WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
                ++  K          +C+     +R +   +
Sbjct: 232 GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 87.8 bits (217), Expect = 4e-21
 Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 3/162 (1%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
               +S  +AV    QV  GL H+ +   +H D+   N + ++  S ++ L       + 
Sbjct: 117 EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 176

Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
                 +       +   E          +D+++   L + + + G  PF   +DD+ L 
Sbjct: 177 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS-GLSPFGGENDDETLR 235

Query: 170 QLESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
            ++S       S  S   E       K +   P+ R T    
Sbjct: 236 NVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQA 277

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (209), Expect = 2e-20
 Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 2/160 (1%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
             +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+       
Sbjct: 98  IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 157

Query: 112 YYKYRNAIL-PLRWLPYEAVFDDEFST-KSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
             +  N +   L ++  E +   EF     DV++   ++  +              Q  S
Sbjct: 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 217

Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
             + KK       K      +L  K +  +P  R T P I
Sbjct: 218 DWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 257

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 84.7 bits (209), Expect = 2e-20
 Identities = 22/164 (13%), Positives = 58/164 (35%), Gaps = 7/164 (4%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DT 107
            +LS  +   +   +   +  +    ++H+D+   N L+  D+++K++  G S       
Sbjct: 105 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 164

Query: 108 YQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
             +E     + + P             +  + D+++   +++ +   G  PF       +
Sbjct: 165 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPFWHRKQMLM 223

Query: 168 LSQLESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
           L  + S    +         + +  L  + +   P +R T    
Sbjct: 224 LRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 267

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 2e-19
 Identities = 27/163 (16%), Positives = 65/163 (39%), Gaps = 4/163 (2%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
                  S+A   A ++ LGL+ +  K ++++D+   N L+  D  +KI+  G+ K+   
Sbjct: 96  SCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 155

Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            +            ++  E +   +++   D +++  L++E+   G+ PF    ++++  
Sbjct: 156 GDAKTNTF-CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI-GQSPFHGQDEEELFH 213

Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ 212
            +      +       +    L  K     P +R      + Q
Sbjct: 214 SIRMDNPFY--PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 254

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.6 bits (201), Expect = 3e-19
 Identities = 30/159 (18%), Positives = 69/159 (43%), Gaps = 4/159 (2%)

Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
            ++ S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K   
Sbjct: 100 RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 159

Query: 109 QKEYYKYRNAIL-PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
            +      N+ +   +++  E + +      SD++A  C+I+++   G  PF   ++  +
Sbjct: 160 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPFRAGNEYLI 218

Query: 168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
             ++   KL +    K       L EK +     +R   
Sbjct: 219 FQKI--IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGC 255

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 80.5 bits (198), Expect = 1e-18
 Identities = 24/164 (14%), Positives = 54/164 (32%), Gaps = 3/164 (1%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 107
                 +S ++ +    Q   GL+H+ +  ++H DI   N +  +  +  + +      T
Sbjct: 118 AAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT 177

Query: 108 YQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
                   +       +   E V  +     +D++A   L + + + G  PF    D + 
Sbjct: 178 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS-GLSPFAGEDDLET 236

Query: 168 LSQLESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
           L  ++     +     S          +  +   P +R T    
Sbjct: 237 LQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 280

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 2e-18
 Identities = 25/161 (15%), Positives = 58/161 (36%), Gaps = 3/161 (1%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 107
                 L+  + V+  +QV   L+ +    + H DI   N +  +  S  I +    +  
Sbjct: 93  NTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152

Query: 108 YQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
             K    +R       +   E    D  ST +D+++   L++ + + G  PF   ++ Q+
Sbjct: 153 QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAETNQQI 211

Query: 168 LSQLESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTF 206
           +  + + +  +      +         ++ +      R T 
Sbjct: 212 IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTA 252

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (194), Expect = 2e-18
 Identities = 32/165 (19%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 50  RVRSLSTSQAVTMAYQVALGLE--HISDKRLIHKDIAARNCLISS-DLSVKISLSGLSKD 106
           R + +      +   Q+  GL+  H     +IH+D+   N  I+    SVKI   GL+  
Sbjct: 105 RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT- 163

Query: 107 TYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-D 165
              K     +  I    ++  E ++++++    DVYA+   + E+    E P+ +  +  
Sbjct: 164 --LKRASFAKAVIGTPEFMAPE-MYEEKYDESVDVYAFGMCMLEMAT-SEYPYSECQNAA 219

Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
           Q+  ++ S              +  + E CI  +  +R +   ++
Sbjct: 220 QIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 264

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 79.0 bits (194), Expect = 4e-18
 Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 7/148 (4%)

Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
            A   A +V L LE++  K +I++D+   N L+  +  +KI+  G +K      Y     
Sbjct: 105 VAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGT 164

Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
                 ++  E V    ++   D +++  LI+E+   G  PF D +  +   ++ + +L 
Sbjct: 165 ----PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA-GYTPFYDSNTMKTYEKILNAELR 219

Query: 178 WKHSSKTPEYITSLHEKCIHPHPHQRPT 205
           +       E +  L  + I     QR  
Sbjct: 220 F--PPFFNEDVKDLLSRLITRDLSQRLG 245

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.6 bits (193), Expect = 6e-18
 Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 7/159 (4%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
           +   +       ++  V  GL ++    +++H+D+   N L++S   +K+   G+S    
Sbjct: 97  KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156

Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
                 +   +    ++  E +    +S +SD+++    + E+   G  P P     ++ 
Sbjct: 157 DSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV-GRYPIPPPDAKEL- 211

Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFP 207
            +L         +++TP    +            RP   
Sbjct: 212 -ELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMA 249

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.9 bits (191), Expect = 1e-17
 Identities = 27/156 (17%), Positives = 66/156 (42%), Gaps = 4/156 (2%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
           R R  +  +A     ++   LE++  + ++++DI   N ++  D  +KI+  GL K+   
Sbjct: 98  RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GI 156

Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            +    +       +L  E + D+++    D +    +++E+   G +PF +   +++  
Sbjct: 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFE 215

Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
            +  +++ +           SL    +   P QR  
Sbjct: 216 LILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLG 249

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.2 bits (189), Expect = 1e-17
 Identities = 30/181 (16%), Positives = 55/181 (30%), Gaps = 16/181 (8%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSK--- 105
           R  S    + +A Q+   +E+I  K  IH+D+   N L+        V I   GL+K   
Sbjct: 98  RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 157

Query: 106 ---DTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDL 162
                    Y + +N     R+         E S + D+ +   ++      G +P+  L
Sbjct: 158 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL-GSLPWQGL 216

Query: 163 SDDQVLSQLESKKLC------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
                  + E                  P    +    C       +P +  +     + 
Sbjct: 217 KAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276

Query: 217 M 217
            
Sbjct: 277 F 277

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 76.8 bits (188), Expect = 2e-17
 Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 18/183 (9%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-----SVKISLSGLSK- 105
           R  S       A Q+   ++ I +K L+++DI   N LI          + +   G+ K 
Sbjct: 96  RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 155

Query: 106 -----DTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
                      Y + +N     R++        E S + D+ A   +       G +P+ 
Sbjct: 156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR-GSLPWQ 214

Query: 161 DLSDDQVLSQLESKKLC------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
            L       + E            +  +  PE          +      P +  +    S
Sbjct: 215 GLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 274

Query: 215 DAM 217
             +
Sbjct: 275 KVL 277

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (187), Expect = 3e-17
 Identities = 36/216 (16%), Positives = 75/216 (34%), Gaps = 36/216 (16%)

Query: 27  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
           G L  +L        ++       +  L+ S A  +A+     +       + H+D+ ++
Sbjct: 86  GSLFDYL--------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 137

Query: 87  NCLISSDLSVKISLSGLSK---DTYQKEYYKYRNAILPLRWLPYEAVFDD------EFST 137
           N L+  + +  I+  GL+               + +   R++  E + D       E   
Sbjct: 138 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFK 197

Query: 138 KSDVYAYACLIWEIF---------NKGEMPFPDLSDDQVLSQLESKKLCWK--------- 179
           ++D+YA   + WEI             ++P+ DL       +   K +C +         
Sbjct: 198 RADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNR 257

Query: 180 -HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
             S +    +  +  +C + +   R T   I   LS
Sbjct: 258 WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.3 bits (187), Expect = 5e-17
 Identities = 22/167 (13%), Positives = 65/167 (38%), Gaps = 12/167 (7%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSKDTY 108
           ++ +  +A  +   +   ++++    + H+D+   N L +S   +  +K++  G +K+T 
Sbjct: 106 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 165

Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
                          ++  E +  +++    D+++   +++ +   G  PF       + 
Sbjct: 166 SHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC-GYPPFYSNHGLAIS 222

Query: 169 SQLESKKLCWKHSSKTPEY------ITSLHEKCIHPHPHQRPTFPSI 209
             ++++    ++    PE+      +  L    +   P QR T    
Sbjct: 223 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 269

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 74.8 bits (183), Expect = 9e-17
 Identities = 32/160 (20%), Positives = 62/160 (38%), Gaps = 5/160 (3%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
               ++  +A+ +       L       +IH+D+   N +IS+  +VK+   G+++    
Sbjct: 104 TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 163

Query: 110 KEYYKYRNAILP--LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
                 + A +    ++L  E    D    +SDVY+  C+++E+   GE PF   S   V
Sbjct: 164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL-TGEPPFTGDSPVSV 222

Query: 168 LSQL--ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
             Q   E               + ++  K +  +P  R  
Sbjct: 223 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQ 262

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 2e-16
 Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 28/185 (15%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
             +      +  +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++      
Sbjct: 97  TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156

Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
                  +      P   +    +ST  D+++  C+  E+       FP  S+   L ++
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQLFRI 215

Query: 172 ESK-----KLCWKHSSKTPEYITS----------------------LHEKCIHPHPHQRP 204
                   ++ W   +  P+Y  S                      L  + +H  P++R 
Sbjct: 216 FRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 275

Query: 205 TFPSI 209
           +  + 
Sbjct: 276 SAKAA 280

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 3e-16
 Identities = 27/156 (17%), Positives = 63/156 (40%), Gaps = 5/156 (3%)

Query: 54  LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
            +  +      ++ L LEH+    +I++DI   N L+ S+  V ++  GLSK+    E  
Sbjct: 126 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 185

Query: 114 KYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
           +  +    + ++  + V   +       D ++   L++E+   G  PF    +    +++
Sbjct: 186 RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT-GASPFTVDGEKNSQAEI 244

Query: 172 ESKKLCWKHS--SKTPEYITSLHEKCIHPHPHQRPT 205
             + L  +     +       L ++ +   P +R  
Sbjct: 245 SRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLG 280

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.3 bits (176), Expect = 9e-16
 Identities = 29/162 (17%), Positives = 66/162 (40%), Gaps = 2/162 (1%)

Query: 58  QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
              +  +Q+  GL     + ++H+D+  +N LI+ +  +K++  GL++            
Sbjct: 102 IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161

Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
            +      P        +ST  D+++  C+  E+ N G   FP    D  L ++   +L 
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI--FRLL 219

Query: 178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
              + +    +T L +   +P      +  ++V +L+    +
Sbjct: 220 GTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRD 261

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.1 bits (176), Expect = 1e-15
 Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 7/156 (4%)

Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
            R+   S   A   A Q+ L  E++    LI++D+   N LI     ++++  G +K   
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192

Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
            + +            L  E +    ++   D +A   LI+E+   G  PF      Q+ 
Sbjct: 193 GRTWTLCGTP----EALAPEIILSKGYNKAVDWWALGVLIYEMA-AGYPPFFADQPIQIY 247

Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
            ++ S K   +  S     +  L    +     +R 
Sbjct: 248 EKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRF 281

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 71.5 bits (174), Expect = 1e-15
 Identities = 33/168 (19%), Positives = 76/168 (45%), Gaps = 3/168 (1%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
             L +  A +   Q+  G+ +  D+R++H+D+  +N LI+ +  +KI+  GL++      
Sbjct: 95  GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154

Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
                  +      P   +   ++ST  D+++  C+  E+ N G   FP +S+   L ++
Sbjct: 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRI 213

Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
              ++    +SK    +T L +   +   ++   + S +  L ++  +
Sbjct: 214 F--RILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGID 259

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.4 bits (172), Expect = 5e-15
 Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 8/163 (4%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSKDTY 108
              +   A  + +QV   ++++ D  ++H+D+   N L  S   D  + IS  GLSK   
Sbjct: 102 GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--M 159

Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
           +        A     ++  E +    +S   D ++   + + +   G  PF D +D ++ 
Sbjct: 160 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC-GYPPFYDENDAKLF 218

Query: 169 SQLESKKLCW--KHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
            Q+   +  +   +     +         +   P +R T    
Sbjct: 219 EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 70.1 bits (171), Expect = 6e-15
 Identities = 28/154 (18%), Positives = 68/154 (44%), Gaps = 12/154 (7%)

Query: 57  SQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 116
           +     A ++ LGLEH+ ++ ++++D+   N L+     V+IS  GL+ D  +K+ +   
Sbjct: 107 ADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 166

Query: 117 NAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
                  ++  E +     + + +D ++  C+++++   G  PF          + E  +
Sbjct: 167 G---THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR-GHSPFRQHKTKD---KHEIDR 219

Query: 176 LCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
           +    + + P+  +    SL E  +    ++R  
Sbjct: 220 MTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLG 253

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 7e-15
 Identities = 30/180 (16%), Positives = 70/180 (38%), Gaps = 5/180 (2%)

Query: 45  GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 104
           G     +   + S+   +   +  GL +I   +++H+D+ A N LI+ D  +K++  GL+
Sbjct: 105 GLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 164

Query: 105 KD---TYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFP 160
           +        +  +Y N ++ L + P E +  + ++    D++   C++ E++        
Sbjct: 165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQ 223

Query: 161 DLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
             ++   L+ +                   L+EK       +R     +   + D    D
Sbjct: 224 GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALD 283

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 9e-15
 Identities = 34/183 (18%), Positives = 73/183 (39%), Gaps = 28/183 (15%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
             + T     M +Q+  GL+ +   R++H+D+  +N L++S   +K++  GL++      
Sbjct: 111 PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SF 168

Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
                + ++ L +   E +    ++T  D+++  C+  E+F   +  F   SD   L ++
Sbjct: 169 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKI 227

Query: 172 -------------------------ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
                                    +S +   K  +   E    L  KC+  +P +R + 
Sbjct: 228 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 287

Query: 207 PSI 209
            S 
Sbjct: 288 YSA 290

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 2e-14
 Identities = 25/167 (14%), Positives = 64/167 (38%), Gaps = 9/167 (5%)

Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD----LSVKISLSGLS 104
               SL+  +A     Q+  G+ ++   ++ H D+   N ++         +KI   GL+
Sbjct: 105 AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164

Query: 105 KDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
                    +++N      ++  E V  +    ++D+++   + + + + G  PF   + 
Sbjct: 165 HKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTK 221

Query: 165 DQVLSQLESKKLCW--KHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
            + L+ + +    +  ++ S T         + +   P +R T    
Sbjct: 222 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS 268

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (164), Expect = 4e-14
 Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 14/160 (8%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVKISLSGLSKDTYQK 110
            +L    A +  +QV   + H  +  ++H+DI   N LI  +   +K+   G        
Sbjct: 105 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164

Query: 111 EYYKYRNAILPLRWLPYEAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
            Y  +        + P E +    +  +S  V++   L++++   G++PF          
Sbjct: 165 VYTDF---DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV-CGDIPFEHDE------ 214

Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
             E  +       +       L   C+   P  RPTF  I
Sbjct: 215 --EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 1e-13
 Identities = 30/180 (16%), Positives = 57/180 (31%), Gaps = 27/180 (15%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
             L+ S           GLE++    ++H+D+   N L+  +  +K++  GL+K      
Sbjct: 95  LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 154

Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
                  +      P        +    D++A  C++ E+        P  SD   L+++
Sbjct: 155 RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRI 213

Query: 172 ESKKLC-----WKHSSKTPEYIT---------------------SLHEKCIHPHPHQRPT 205
                      W      P+Y+T                      L +     +P  R T
Sbjct: 214 FETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT 273

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.0 bits (155), Expect = 1e-12
 Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 30/182 (16%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI-AARNCLISSDLSVKISLSGLSKDTYQK 110
           ++L         YQ+   L +I    + H+DI      L      +K+   G +K   + 
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176

Query: 111 EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL-- 168
           E              P       ++++  DV++  C++ E+   G+  FP  S    L  
Sbjct: 177 EPN-VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVE 234

Query: 169 -------------------------SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
                                     Q+++         +TP    +L  + +   P  R
Sbjct: 235 IIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294

Query: 204 PT 205
            T
Sbjct: 295 LT 296

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 1e-12
 Identities = 26/173 (15%), Positives = 60/173 (34%), Gaps = 4/173 (2%)

Query: 50  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
           + + LS        YQ+  GL++I    ++H+D+   N L+++   +KI   GL++  D 
Sbjct: 102 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 161

Query: 108 YQKEYYKYRNAILPLRWLPYEAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDDQ 166
                      +    +   E + + +  TKS D+++  C++ E+ +     FP      
Sbjct: 162 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPIFPGKHYLD 220

Query: 167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
            L+ +                        +      +  +  +         +
Sbjct: 221 QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALD 273

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 8e-10
 Identities = 28/168 (16%), Positives = 57/168 (33%), Gaps = 4/168 (2%)

Query: 52  RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
             L   +   + YQ+  GL +I    +IH+D+   N  ++ D  +KI   GL++    + 
Sbjct: 116 EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE- 174

Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
                  +      P   +    ++   D+++  C++ E+   G+  F        L ++
Sbjct: 175 --MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT-GKTLFKGSDHLDQLKEI 231

Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
                                         ++  F SI+T  S    N
Sbjct: 232 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVN 279

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 53.7 bits (128), Expect = 3e-09
 Identities = 23/168 (13%), Positives = 58/168 (34%), Gaps = 6/168 (3%)

Query: 45  GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVKISLSGL 103
              K   ++L+        Y++   L++     ++H+D+   N +I  +   +++   GL
Sbjct: 117 TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 176

Query: 104 SKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS 163
           ++  +  + Y  R         P   V    +    D+++  C++  +  + E  F    
Sbjct: 177 AEFYHPGQEYNVR-VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 235

Query: 164 DDQVLSQ----LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFP 207
           +   L +    L ++ L         E     ++        +   F 
Sbjct: 236 NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 283

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 9e-09
 Identities = 29/173 (16%), Positives = 64/173 (36%), Gaps = 8/173 (4%)

Query: 49  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
            + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL+    
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---R 169

Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
             +              P   +    ++   D+++  C++ E+   G   FP       L
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQL 228

Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP--TFPSIVTQLSDAMCN 219
             +   +L     ++  + I+S   +       Q P   F ++    +    +
Sbjct: 229 KLI--LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVD 279

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 26/155 (16%), Positives = 63/155 (40%), Gaps = 9/155 (5%)

Query: 55  STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 114
              +   + YQ+  G++H+    +IH+D+   N ++ SD ++KI   GL++         
Sbjct: 117 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 176

Query: 115 YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK 174
               ++   +   E +    +    D+++  C++ E+    ++ FP              
Sbjct: 177 PY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQW-----N 228

Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
           K+  +  +  PE++  L    +  +   RP +  +
Sbjct: 229 KVIEQLGTPCPEFMKKLQPT-VRNYVENRPKYAGL 262

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.2 bits (121), Expect = 2e-08
 Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 12/148 (8%)

Query: 48  KPRVRSLSTSQAVTMAYQVALGLEHISDKR-LIHKDIAARNCLISSD------LSVKISL 100
           K   R +       ++ Q+ LGL+++  +  +IH DI   N L+         + +KI+ 
Sbjct: 116 KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIAD 175

Query: 101 SGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
            G +    +      +       +   E +    +   +D+++ ACLI+E+   G+  F 
Sbjct: 176 LGNACWYDEHYTNSIQT----REYRSPEVLLGAPWGCGADIWSTACLIFELIT-GDFLFE 230

Query: 161 DLSDDQVLSQLESKKLCWKHSSKTPEYI 188
                      +      +   + P Y+
Sbjct: 231 PDEGHSYTKDDDHIAQIIELLGELPSYL 258

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 34.8 bits (79), Expect = 0.004
 Identities = 12/95 (12%), Positives = 30/95 (31%), Gaps = 16/95 (16%)

Query: 62  MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY--QKEYYKYRNAI 119
           +   +   +     + ++H D++  N L+S +    I     S +           R+  
Sbjct: 108 VLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEGIWIIDF-PQSVEVGEEGWREILERDVR 166

Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
             + +      F   + T+ D       I    ++
Sbjct: 167 NIITY------FSRTYRTEKD-------INSAIDR 188

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	223
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.96
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.4
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.13
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	92.51
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	91.54
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	90.75
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	89.14

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-44  Score=276.80  Aligned_cols=188  Identities=23%  Similarity=0.485  Sum_probs=155.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+.              .+++..++.++.||++||.|||+++++||||||+||+++.++.+
T Consensus        75 ~~lv~E~~~~g~L~~~l~~~~~--------------~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~  140 (263)
T d1sm2a_          75 ICLVFEFMEHGCLSDYLRTQRG--------------LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVI  140 (263)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCE
T ss_pred             eEEEEEecCCCcHHHHhhcccc--------------CCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCe
Confidence            4588999999999999986533              68999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++..............++..|+|||.+.+..++.++|||||||++|||++.+..||...+..+....+..+ .
T Consensus       141 Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~-~  219 (263)
T d1sm2a_         141 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-F  219 (263)
T ss_dssp             EECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHT-C
T ss_pred             EecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhc-C
Confidence            999999998665444333445677889999999999999999999999999999996678888888888888887776 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      +...+..+++++.+++..||+.||++|||+++++++|+++.++
T Consensus       220 ~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         220 RLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence            5566778899999999999999999999999999999998764

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.4e-44  Score=279.75  Aligned_cols=188  Identities=28%  Similarity=0.463  Sum_probs=155.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|+|.+++.....              .+++.+++.++.||++||.|||+++++||||||+||+++.++.+
T Consensus       102 ~~iv~Ey~~~g~L~~~~~~~~~--------------~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~  167 (299)
T d1jpaa_         102 VMIITEFMENGSLDSFLRQNDG--------------QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVC  167 (299)
T ss_dssp             CEEEEECCTTEEHHHHHHTTTT--------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCE
T ss_pred             EEEEEEecCCCcceeeeccccC--------------CCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcE
Confidence            4488999999999999986433              69999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh----hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEY----YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      ||+|||+++.......    .......+|+.|+|||.+....++.++|||||||++|||++.|..||.+....+....+.
T Consensus       168 Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~  247 (299)
T d1jpaa_         168 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE  247 (299)
T ss_dssp             EECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred             EECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            9999999976543321    112234568899999999988999999999999999999966899999999988888887


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      .+ .+.+.+..+++++.+++.+||+.||++|||++++++.|++++.+
T Consensus       248 ~~-~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         248 QD-YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             TT-CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             cC-CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            76 55666778999999999999999999999999999999998754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-45  Score=279.83  Aligned_cols=189  Identities=26%  Similarity=0.438  Sum_probs=163.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.++++..+               .+++..++.++.||+.||.|||+++++||||||+||+++.++.+
T Consensus        82 ~~lvmE~~~~g~L~~~l~~~~---------------~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~  146 (277)
T d1xbba_          82 WMLVMEMAELGPLNKYLQQNR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA  146 (277)
T ss_dssp             EEEEEECCTTEEHHHHHHHCT---------------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE
T ss_pred             EEEEEEcCCCCcHHHHHhhcc---------------CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcc
Confidence            448999999999999998654               49999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +++|||+++......  ........+|+.|+|||.+.+..++.++|||||||++|||++.|..||.+....++...+..+
T Consensus       147 kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~  226 (277)
T d1xbba_         147 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG  226 (277)
T ss_dssp             EECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred             cccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcC
Confidence            999999997643322  112234567889999999998889999999999999999996699999999988888887776


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhcc
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDV  221 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~  221 (223)
                       .+++.+..+|+++.+++.+||+.||++|||++++.+.|+..+.+.+
T Consensus       227 -~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~  272 (277)
T d1xbba_         227 -ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  272 (277)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred             -CCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhcC
Confidence             5566678899999999999999999999999999999888765544

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-45  Score=285.38  Aligned_cols=203  Identities=29%  Similarity=0.494  Sum_probs=156.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDK-SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~-~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+|||||++|+|.++|+..+....+. ..........+++.+++.++.||++||.|||+++++||||||+||+++.++.
T Consensus        93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~  172 (299)
T d1ywna1          93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV  172 (299)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGC
T ss_pred             EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCc
Confidence            447899999999999998765422110 0011112346899999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +||+|||+++...... ........+|+.|+|||.+.+..++.++|||||||++|||++.+..||.+....+.+......
T Consensus       173 ~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~  252 (299)
T d1ywna1         173 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE  252 (299)
T ss_dssp             EEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH
T ss_pred             EEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc
Confidence            9999999997544332 222344578899999999999999999999999999999996667788877654444443333


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ...+..+..+++++.+++.+||+.||++|||++|++++|+++++.
T Consensus       253 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         253 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            356667778999999999999999999999999999999999864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-44  Score=274.83  Aligned_cols=187  Identities=21%  Similarity=0.387  Sum_probs=151.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|||.++++..+              ..+++..++.++.||++||.|||+++++||||||+||+++.++.+
T Consensus        78 ~~lv~Ey~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~  143 (276)
T d1uwha_          78 LAIVTQWCEGSSLYHHLHIIE--------------TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV  143 (276)
T ss_dssp             CEEEEECCCEEEHHHHHHTSC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSE
T ss_pred             EEEEEecCCCCCHHHHHhhcc--------------CCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCE
Confidence            458999999999999997643              359999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCccccccccccccc---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HH
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFD---DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS-QL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~---~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~-~~  171 (223)
                      ||+|||+++...... ........+|+.|+|||.+..   ..++.++|||||||++|||+ +|..||.+........ .+
T Consensus       144 Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~-tg~~Pf~~~~~~~~~~~~~  222 (276)
T d1uwha_         144 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM-TGQLPYSNINNRDQIIFMV  222 (276)
T ss_dssp             EECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHH-HSSCTTTTCCCHHHHHHHH
T ss_pred             EEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHH-HCCCCCCCCChHHHHHHHH
Confidence            999999997654332 223345678999999999864   34788999999999999999 6999998876554433 33


Q ss_pred             HhCccc---CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       172 ~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      ..+...   ...+..+++++.+++.+||+.||++|||+++++++|+.+.+
T Consensus       223 ~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             HHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            333222   12356789999999999999999999999999999988764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-44  Score=277.54  Aligned_cols=187  Identities=25%  Similarity=0.422  Sum_probs=162.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++...+              ..+++..+..++.||++||.|||+++++||||||+||+++.++.+
T Consensus        83 ~~lvmE~~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~  148 (285)
T d1u59a_          83 LMLVMEMAGGGPLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYA  148 (285)
T ss_dssp             EEEEEECCTTEEHHHHHTTCT--------------TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEE
T ss_pred             EEEEEEeCCCCcHHHHhhccc--------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCce
Confidence            448999999999999986543              369999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhh--hhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      |++|||+++.......  .......+|+.|+|||.+....++.++|||||||++|||++.|..||.+....++...+..+
T Consensus       149 Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~  228 (285)
T d1u59a_         149 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG  228 (285)
T ss_dssp             EECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT
T ss_pred             eeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            9999999986543321  12234467889999999988889999999999999999996699999998888888887776


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                       .+++.+..+|+++.+++.+||+.||++|||+.++.+.|+....
T Consensus       229 -~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         229 -KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -CCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence             4566678899999999999999999999999999999887654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-44  Score=275.61  Aligned_cols=189  Identities=30%  Similarity=0.482  Sum_probs=165.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++.....             .++++..++.++.||++||.|||+++++||||||+||+++.++.+
T Consensus        82 ~~iv~Ey~~~g~L~~~~~~~~~-------------~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~  148 (272)
T d1qpca_          82 IYIITEYMENGSLVDFLKTPSG-------------IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC  148 (272)
T ss_dssp             CEEEEECCTTCBHHHHTTSHHH-------------HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCE
T ss_pred             eEEEEEeCCCCcHHHHHhhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccce
Confidence            4589999999999998875544             469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++..............+++.|+|||.+....++.++|||||||++|||++.+..|+......+....+..+ .
T Consensus       149 Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~-~  227 (272)
T d1qpca_         149 KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-Y  227 (272)
T ss_dssp             EECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-C
T ss_pred             eeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-C
Confidence            999999998665443333445677889999999988889999999999999999996577778888888888777766 5


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ++..+..+++++.+++.+||+.||++|||++++++.|++.+..
T Consensus       228 ~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         228 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            5666788999999999999999999999999999999988754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.9e-44  Score=275.63  Aligned_cols=189  Identities=29%  Similarity=0.478  Sum_probs=161.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|+|.+++.....             ..+++..++.++.||++||.|||++|++||||||+|||++.++.+
T Consensus        88 ~~iv~E~~~~g~l~~~l~~~~~-------------~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~  154 (287)
T d1opja_          88 FYIITEFMTYGNLLDYLRECNR-------------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV  154 (287)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCT-------------TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCE
T ss_pred             eEEEeecccCcchHHHhhhccc-------------cchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcE
Confidence            4488999999999999987543             569999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++..............++..|+|||.+.+..++.++|||||||++|||++.+..|+.+.+.......+..+ .
T Consensus       155 Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~-~  233 (287)
T d1opja_         155 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-Y  233 (287)
T ss_dssp             EECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-C
T ss_pred             EEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC-C
Confidence            999999998655443333334457788999999999999999999999999999995456666666776666665554 5


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      .++.+..+++++.+++.+||+.||++|||++++++.|+.++.+
T Consensus       234 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         234 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            6677788999999999999999999999999999999887654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-44  Score=273.48  Aligned_cols=189  Identities=31%  Similarity=0.519  Sum_probs=155.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++.....              ++++..++.++.||++||.|||+++++||||||+||+++.++.+
T Consensus        82 ~~iv~E~~~~g~l~~~~~~~~~--------------~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~  147 (273)
T d1mp8a_          82 VWIIMELCTLGELRSFLQVRKY--------------SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV  147 (273)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTT--------------TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEE
T ss_pred             EEEEEEeccCCcHHhhhhccCC--------------CCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcE
Confidence            4589999999999999876543              69999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      |++|||+++..............+|+.|+|||.+....++.++|||||||++|||++.|..||.+.+..+....+..+ .
T Consensus       148 Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~-~  226 (273)
T d1mp8a_         148 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-E  226 (273)
T ss_dssp             EECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-C
T ss_pred             EEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-C
Confidence            999999998654444333445567889999999999999999999999999999996699999999988888888776 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      ..+.+..+++++.++|.+||+.||++|||+++|+++|++++++.
T Consensus       227 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  270 (273)
T d1mp8a_         227 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  270 (273)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            45667889999999999999999999999999999999988653

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-44  Score=280.91  Aligned_cols=199  Identities=29%  Similarity=0.479  Sum_probs=161.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCC--------CCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSG--------SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNC   88 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~ni   88 (223)
                      ..+|||||++|+|.++|+..+........        ........+++..++.++.||++||.|||+++|+||||||+||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Ni  195 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV  195 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGE
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhcc
Confidence            44899999999999999876532111000        0011234689999999999999999999999999999999999


Q ss_pred             eeecCCCeEEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy15108         89 LISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV  167 (223)
Q Consensus        89 l~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~  167 (223)
                      +++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++.|..||.+.+..+.
T Consensus       196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~  275 (325)
T d1rjba_         196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  275 (325)
T ss_dssp             EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH
Confidence            9999999999999999765443211 223455688999999999999999999999999999999668999998777666


Q ss_pred             HHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      +..+.....+++.+..+++++++||.+||+.||++|||++||+++|..
T Consensus       276 ~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         276 FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            666666557777788899999999999999999999999999999964

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-43  Score=271.21  Aligned_cols=174  Identities=20%  Similarity=0.255  Sum_probs=155.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|||||++|+|.+++...+               .+++..+..++.||++||.|||++|++||||||+||+++.++.+|
T Consensus        82 ~ivmEy~~~g~L~~~l~~~~---------------~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~k  146 (263)
T d2j4za1          82 YLILEYAPLGTVYRELQKLS---------------KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELK  146 (263)
T ss_dssp             EEEEECCTTCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             EEEEeecCCCcHHHHHhhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEe
Confidence            38999999999999998764               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      ++|||++.......   .....||+.|+|||.+.+..++.++||||+||++|+|+ +|+.||.+.+..+....+..... 
T Consensus       147 l~DFG~a~~~~~~~---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell-~G~~Pf~~~~~~~~~~~i~~~~~-  221 (263)
T d2j4za1         147 IADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF-  221 (263)
T ss_dssp             ECCCCSCSCCCCCC---CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHHHTTCC-
T ss_pred             ecccceeeecCCCc---ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHh-cCCCCCCCCCHHHHHHHHHcCCC-
Confidence            99999997654322   23457899999999999999999999999999999999 79999999988888888776543 


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                       ..+..+++++++++.+||+.||++|||++|+++|
T Consensus       222 -~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         222 -TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             -CCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence             3456789999999999999999999999999875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-43  Score=271.04  Aligned_cols=187  Identities=27%  Similarity=0.476  Sum_probs=158.6

Q ss_pred             CCCCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC
Q psy15108         15 KDKSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL   94 (223)
Q Consensus        15 ~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~   94 (223)
                      +...+|+||+++|+|.++|..++.             ..+++..+++++.||++|+.|||+.+++||||||+||+++.++
T Consensus        74 ~~~~lv~ey~~~g~L~~~l~~~~~-------------~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~  140 (262)
T d1byga_          74 GGLYIVTEYMAKGSLVDYLRSRGR-------------SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN  140 (262)
T ss_dssp             -CCEEEECCCTTEEHHHHHHHHHH-------------HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS
T ss_pred             CcEEEEEeccCCCCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCC
Confidence            335589999999999999987654             3589999999999999999999999999999999999999999


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++++|||+++.....    .....++..|+|||.+.+..++.++|||||||++|||++.|..||...+..++...+..+
T Consensus       141 ~~kl~dfg~s~~~~~~----~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~  216 (262)
T d1byga_         141 VAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG  216 (262)
T ss_dssp             CEEECCCCC----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT
T ss_pred             CEeecccccceecCCC----CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC
Confidence            9999999999754332    233456788999999998899999999999999999996689999998888888887765


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       .+++.+..+++++++++.+||..||++|||+.+++++|+++-..
T Consensus       217 -~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         217 -YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -CCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence             56677788999999999999999999999999999999987644

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-43  Score=267.12  Aligned_cols=184  Identities=29%  Similarity=0.535  Sum_probs=163.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.+|+|.+++.....              .+++..+++++.|+++||.|||+.|++||||||+||+++.++.+
T Consensus        74 ~~iv~Ey~~~g~l~~~~~~~~~--------------~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~  139 (258)
T d1k2pa_          74 IFIITEYMANGCLLNYLREMRH--------------RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVV  139 (258)
T ss_dssp             EEEEEECCTTEEHHHHHHSGGG--------------CCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCE
T ss_pred             eEEEEEccCCCcHHHhhhcccc--------------CCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcE
Confidence            4478999999999999886544              68999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++..............++..|+|||.+....++.++||||||+++|||+|.|..||.+....++...+..+ .
T Consensus       140 kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~-~  218 (258)
T d1k2pa_         140 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-L  218 (258)
T ss_dssp             EECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-C
T ss_pred             EECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhC-C
Confidence            999999997655443333344667889999999999999999999999999999996689999999998888888776 5


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD  215 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~  215 (223)
                      ++..+..+++++.+++.+||+.||++|||+++++++|.+
T Consensus       219 ~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         219 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             CCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            667778899999999999999999999999999999864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-43  Score=271.64  Aligned_cols=181  Identities=16%  Similarity=0.277  Sum_probs=147.9

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----cccCCCCCCCeeeec
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR-----LIHKDIAARNCLISS   92 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----i~H~di~~~nil~~~   92 (223)
                      .+|||||++|||.+++.+...           ....+++..++.++.|+++||.|||+++     |+||||||+||+++.
T Consensus        81 ~ivmEy~~~g~L~~~i~~~~~-----------~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~  149 (269)
T d2java1          81 YIVMEYCEGGDLASVITKGTK-----------ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG  149 (269)
T ss_dssp             EEEEECCTTEEHHHHHHHHHH-----------HTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECT
T ss_pred             EEEEecCCCCcHHHHHHhccc-----------cCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCC
Confidence            479999999999999986543           2356999999999999999999999876     999999999999999


Q ss_pred             CCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         93 DLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        93 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      ++.+||+|||+++....... ......+++.|+|||++.+..++.++||||+||++|+|+ +|..||.+.+..+....+.
T Consensus       150 ~~~vkl~DFG~a~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~-tg~~Pf~~~~~~~~~~~i~  227 (269)
T d2java1         150 KQNVKLGDFGLARILNHDTS-FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC-ALMPPFTAFSQKELAGKIR  227 (269)
T ss_dssp             TSCEEECCHHHHHHC------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHH
T ss_pred             CCcEEEeeccceeecccCCC-ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHh-hCCCCCCCCCHHHHHHHHH
Confidence            99999999999876543221 224467889999999999889999999999999999999 7999999999888888887


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .... ...+..+++++.+++.+||+.||++|||++|+++|
T Consensus       228 ~~~~-~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         228 EGKF-RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             HTCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cCCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            7643 34567789999999999999999999999999864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-42  Score=265.10  Aligned_cols=188  Identities=28%  Similarity=0.470  Sum_probs=155.7

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+++||+.+|+|.+++.....              .+++.++..++.||+.|+.|||+.+++||||||+|||++.++.+
T Consensus        84 ~~~v~e~~~~~~l~~~~~~~~~--------------~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~  149 (283)
T d1mqba_          84 MMIITEYMENGALDKFLREKDG--------------EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVC  149 (283)
T ss_dssp             EEEEEECCTTEEHHHHHHHTTT--------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCE
T ss_pred             eEEEEEecccCcchhhhhcccc--------------cccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeE
Confidence            3378999999999999886543              69999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ||+|||+++......  ........+|..|+|||.+.+..++.++|||||||++|||++.+..|+......++...+..+
T Consensus       150 Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~  229 (283)
T d1mqba_         150 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG  229 (283)
T ss_dssp             EECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT
T ss_pred             EEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhcc
Confidence            999999997654332  112233467889999999999999999999999999999995567777777777777777666


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       .+++.+..++.++.+++.+||+.||++||+++++++.|+++++.
T Consensus       230 -~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         230 -FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             -CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             -CCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence             56667788999999999999999999999999999999988753

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-42  Score=268.05  Aligned_cols=180  Identities=21%  Similarity=0.275  Sum_probs=154.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|+|.+++.+.+.              ++++.++..++.||++||.|||++||+||||||+||+++.++.+
T Consensus        84 ~~lvmEy~~~g~L~~~~~~~~~--------------~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~  149 (288)
T d2jfla1          84 LWILIEFCAGGAVDAVMLELER--------------PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDI  149 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHHTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCE
T ss_pred             EEEEEecCCCCcHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCE
Confidence            3489999999999999876543              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      ||+|||++....... .......+++.|+|||.+.     ...++.++||||+||++|+|+ +|..||.+.+..+....+
T Consensus       150 Kl~DFG~a~~~~~~~-~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyeml-tg~~Pf~~~~~~~~~~~i  227 (288)
T d2jfla1         150 KLADFGVSAKNTRTI-QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKI  227 (288)
T ss_dssp             EECCCTTCEECHHHH-HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHH-HSSCTTTTSCGGGHHHHH
T ss_pred             EEEechhhhccCCCc-ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHh-hCCCCCCCCCHHHHHHHH
Confidence            999999997554332 2334578899999999974     445789999999999999999 799999998888877777


Q ss_pred             HhCcc-cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKL-CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..... ....+..+++++++++.+||+.||++|||++|+++|
T Consensus       228 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         228 AKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             HHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            66533 334456789999999999999999999999999875

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-42  Score=265.48  Aligned_cols=189  Identities=29%  Similarity=0.475  Sum_probs=158.1

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+++|+|.+++.....             ..+++.+++.++.||+.||.|||+++++||||||+||+++.++.+
T Consensus        86 ~~lv~Ey~~~g~l~~~~~~~~~-------------~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~  152 (285)
T d1fmka3          86 IYIVTEYMSKGSLLDFLKGETG-------------KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC  152 (285)
T ss_dssp             CEEEECCCTTCBHHHHHSHHHH-------------TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCE
T ss_pred             eEEEEEecCCCchhhhhhhccc-------------ccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcE
Confidence            5589999999999999986544             469999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++..............+++.|+|||.+....++.++|||||||++|||++.+..|+......+.+..+..+ .
T Consensus       153 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~-~  231 (285)
T d1fmka3         153 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y  231 (285)
T ss_dssp             EECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-C
T ss_pred             EEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-C
Confidence            999999998655444333444677899999999999999999999999999999996577777777777788777765 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ..+.+..+++++++++.+||+.||++||++++|++.|++.+.+
T Consensus       232 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         232 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             CCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            5567788999999999999999999999999999999887654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-42  Score=265.17  Aligned_cols=186  Identities=27%  Similarity=0.421  Sum_probs=162.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+|||++|+|.+++..+..              ++++..++.++.||++||.|||+++++||||||+||+++.++.+
T Consensus        85 ~~lv~e~~~~~~l~~~~~~~~~--------------~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~v  150 (273)
T d1u46a_          85 MKMVTELAPLGSLLDRLRKHQG--------------HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLV  150 (273)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGG--------------GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEE
T ss_pred             hheeeeeecCcchhhhhhcccC--------------CCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccce
Confidence            4488999999999999887654              59999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         97 KISLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      |++|||++.......  ........++..|+|||.+.+..++.++||||||+++|||++.|..||.+.+..+....+...
T Consensus       151 kl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~  230 (273)
T d1u46a_         151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE  230 (273)
T ss_dssp             EECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS
T ss_pred             eeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhC
Confidence            999999998654332  112233456788999999998889999999999999999996689999999999998888877


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA  216 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~  216 (223)
                      ...++.+..+++++.+++.+||+.||++|||+++|++.|.++
T Consensus       231 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         231 GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            677777888999999999999999999999999999988764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-42  Score=267.80  Aligned_cols=178  Identities=17%  Similarity=0.276  Sum_probs=153.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|+|.+++..                ..+++.++..++.||+.||.|||++|++||||||+||+++.++.+
T Consensus        92 ~~ivmEy~~gg~L~~~~~~----------------~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~v  155 (293)
T d1yhwa1          92 LWVVMEYLAGGSLTDVVTE----------------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV  155 (293)
T ss_dssp             EEEEEECCTTCBHHHHHHH----------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCE
T ss_pred             EEEEEEecCCCcHHHHhhc----------------cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcE
Confidence            3489999999999998864                258999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-Cc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES-KK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~-~~  175 (223)
                      |++|||+++...... .......+++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.+.......+.. ..
T Consensus       156 kl~DFG~a~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyeml-tG~~Pf~~~~~~~~~~~~~~~~~  233 (293)
T d1yhwa1         156 KLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI-EGEPPYLNENPLRALYLIATNGT  233 (293)
T ss_dssp             EECCCTTCEECCSTT-CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCHHHHHHHHHHHCS
T ss_pred             eeccchhheeecccc-ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHh-hCCCCCCCCCHHHHHHHHHhCCC
Confidence            999999997654322 1234567899999999999989999999999999999999 79999998887666655543 33


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+..+++++++++.+||+.||++|||++|+++|
T Consensus       234 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             CCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             CCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            3445556789999999999999999999999999875

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.2e-42  Score=267.76  Aligned_cols=178  Identities=17%  Similarity=0.206  Sum_probs=144.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee---cC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS---SD   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~---~~   93 (223)
                      ..+|||||++|||.++|...+               .+++..+..++.||+.||.|||++|++||||||.||++.   .+
T Consensus        82 ~~lvmE~~~gg~L~~~l~~~~---------------~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~  146 (307)
T d1a06a_          82 LYLIMQLVSGGELFDRIVEKG---------------FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED  146 (307)
T ss_dssp             EEEEECCCCSCBHHHHHHTCS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTT
T ss_pred             EEEEEeccCCCcHHHhhhccc---------------CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCC
Confidence            348899999999999998643               499999999999999999999999999999999999995   46


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +.+|++|||+++......  ......||+.|+|||.+.+..++.++||||+||++|+|+ +|..||.+....+....+..
T Consensus       147 ~~vkl~DFG~a~~~~~~~--~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell-~g~~Pf~~~~~~~~~~~i~~  223 (307)
T d1a06a_         147 SKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL-CGYPPFYDENDAKLFEQILK  223 (307)
T ss_dssp             CCEEECCC--------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHT
T ss_pred             ceEEEeccceeEEccCCC--eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHH-hCCCCCCCCCHHHHHHHHhc
Confidence            889999999997554332  234467899999999999999999999999999999999 79999999988888888877


Q ss_pred             CcccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......  ....+++++.+++.+||+.||++|||++|+++|
T Consensus       224 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         224 AEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             TCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             cCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            654433  335789999999999999999999999999986

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=267.98  Aligned_cols=178  Identities=16%  Similarity=0.222  Sum_probs=153.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|+|.+++...+.               +++..+..++.|++.||.|||++|++||||||+||+++.++.+
T Consensus        83 ~~ivmEy~~gg~L~~~~~~~~~---------------l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~v  147 (288)
T d1uu3a_          83 LYFGLSYAKNGELLKYIRKIGS---------------FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI  147 (288)
T ss_dssp             EEEEECCCTTEEHHHHHHHHSS---------------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCE
T ss_pred             EEEEEEccCCCCHHHhhhccCC---------------CCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceE
Confidence            4489999999999999987654               9999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||+++...... ........||+.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.+..+....+....
T Consensus       148 kl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell-~g~~Pf~~~~~~~~~~~i~~~~  226 (288)
T d1uu3a_         148 QITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQKIIKLE  226 (288)
T ss_dssp             EECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHTTC
T ss_pred             EecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHh-hCCCCCCCcCHHHHHHHHHcCC
Confidence            999999997654332 22234567899999999999999999999999999999999 7999999999888888887764


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .  ..+..++++++++|.+||+.||.+|||++|++++
T Consensus       227 ~--~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~  261 (288)
T d1uu3a_         227 Y--DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY  261 (288)
T ss_dssp             C--CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred             C--CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCC
Confidence            3  3456789999999999999999999999987543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-41  Score=263.44  Aligned_cols=202  Identities=32%  Similarity=0.561  Sum_probs=166.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccc-cCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSK-DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+|||||.+|+|.++|+.++.... ............+++..++.++.||+.||.|||+.+++||||||+||+++.++.
T Consensus        94 ~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~  173 (299)
T d1fgka_          94 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV  173 (299)
T ss_dssp             CEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC
T ss_pred             EEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCC
Confidence            4478999999999999986643111 001111123356999999999999999999999999999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhh-hhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +|++|||+++........ ......+++.|+|||.+.+..++.++|||||||++|+|++.|..||.+.+..++...+..+
T Consensus       174 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~  253 (299)
T d1fgka_         174 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG  253 (299)
T ss_dssp             EEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT
T ss_pred             eEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcC
Confidence            999999999865443211 2234567788999999999999999999999999999996689999999988888777665


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                       ..++.+..+++++.+++.+||+.||.+|||++|+++.|++++.-
T Consensus       254 -~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~  297 (299)
T d1fgka_         254 -HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  297 (299)
T ss_dssp             -CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -CCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhc
Confidence             66677888999999999999999999999999999999998753

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-42  Score=262.02  Aligned_cols=175  Identities=19%  Similarity=0.281  Sum_probs=147.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCCCCCeeee-cCC
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLIS-SDL   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~~~nil~~-~~~   94 (223)
                      .+|||||++|+|.++++..+               .+++..+..++.||++||.|||+++  ++||||||+||+++ .++
T Consensus        88 ~ivmE~~~~g~L~~~l~~~~---------------~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~  152 (270)
T d1t4ha_          88 VLVTELMTSGTLKTYLKRFK---------------VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTG  152 (270)
T ss_dssp             EEEEECCCSCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTS
T ss_pred             EEEEeCCCCCcHHHHHhccc---------------cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCC
Confidence            37899999999999998764               4999999999999999999999998  99999999999996 478


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHh
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQLES  173 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~-~~~~~~~~~~  173 (223)
                      .+||+|||+++.....   ......||+.|+|||.+.+ .++.++||||+||++|+|+ +|..||.+.. .......+..
T Consensus       153 ~~Kl~DFGla~~~~~~---~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~-~g~~Pf~~~~~~~~~~~~i~~  227 (270)
T d1t4ha_         153 SVKIGDLGLATLKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMA-TSEYPYSECQNAAQIYRRVTS  227 (270)
T ss_dssp             CEEECCTTGGGGCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHH-HSSCTTTTCSSHHHHHHHHTT
T ss_pred             CEEEeecCcceeccCC---ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHH-HCCCCCCCcccHHHHHHHHHc
Confidence            9999999999743322   2235678999999998854 6999999999999999999 7999997654 4455566665


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +......+...++++.+++.+||+.||++|||++|+++|
T Consensus       228 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         228 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence            544444455678899999999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-42  Score=268.30  Aligned_cols=187  Identities=23%  Similarity=0.426  Sum_probs=160.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..++++|+.+|+|.+++.....              .+++..++.++.||++||.|||+++++||||||+||+++.++.+
T Consensus        85 ~~~v~e~~~~~~l~~~~~~~~~--------------~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~  150 (317)
T d1xkka_          85 VQLITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV  150 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSS--------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEE
T ss_pred             eeEEEEeccCCccccccccccc--------------CCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCe
Confidence            3477899999999999987543              69999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ||+|||+++...... ........+|..|+|||.+.+..++.++|||||||++|||+|.|..||.+.+..++...+..+ 
T Consensus       151 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~-  229 (317)
T d1xkka_         151 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-  229 (317)
T ss_dssp             EECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHT-
T ss_pred             EeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-
Confidence            999999987654322 112233467889999999999999999999999999999996699999998888887777666 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      .+++.+..+++++.+++.+||+.||.+|||+++++++|.++..
T Consensus       230 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         230 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            5566677899999999999999999999999999999988754

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-43  Score=267.71  Aligned_cols=178  Identities=21%  Similarity=0.220  Sum_probs=147.8

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|||||.+|+|.++|+.++               .+++..+..++.||++||.|||++|++||||||+||+++.++.+||
T Consensus        80 ivmEy~~gg~L~~~l~~~~---------------~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL  144 (271)
T d1nvra_          80 LFLEYCSGGELFDRIEPDI---------------GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKI  144 (271)
T ss_dssp             EEEECCTTEEGGGGSBTTT---------------BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred             EEEeccCCCcHHHHHhcCC---------------CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEE
Confidence            8899999999999996543               4999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhh-hhhhhcCCcccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhCc
Q psy15108         99 SLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKK  175 (223)
Q Consensus        99 ~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~~~~~~~  175 (223)
                      +|||+++...... ........||+.|+|||.+.+..+ +.++||||+||++|+|+ +|..||...... ..........
T Consensus       145 ~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml-~G~~pf~~~~~~~~~~~~~~~~~  223 (271)
T d1nvra_         145 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKK  223 (271)
T ss_dssp             CCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHH-HSSCSCSSSSTTSHHHHHHHTTC
T ss_pred             ccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHH-hCCCCCCCCChHHHHHHHHhcCC
Confidence            9999998654332 122345678999999999988776 56799999999999999 799999765543 3333344433


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ........+++++.+++.+||+.||++|||++|+++|
T Consensus       224 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  260 (271)
T d1nvra_         224 TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  260 (271)
T ss_dssp             TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            3333345678999999999999999999999999875

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.3e-41  Score=263.32  Aligned_cols=201  Identities=29%  Similarity=0.534  Sum_probs=162.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccC---------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDK---------SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN   87 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~n   87 (223)
                      ...++||+.+|+|.++|+.........         ..........+++..++.++.|++.||.|||+++++||||||+|
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~N  170 (301)
T d1lufa_          91 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRN  170 (301)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             eEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccc
Confidence            447899999999999998654321110         00111233468999999999999999999999999999999999


Q ss_pred             eeeecCCCeEEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy15108         88 CLISSDLSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ  166 (223)
Q Consensus        88 il~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~  166 (223)
                      |+++.++.+||+|||+++...... ........+++.|+|||.+.+..++.++|||||||++|||++.+..||.+.+..+
T Consensus       171 ILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e  250 (301)
T d1lufa_         171 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE  250 (301)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             eEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHH
Confidence            999999999999999987554333 2223345677889999999999999999999999999999955567899999999


Q ss_pred             HHHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      ....+..+ ..++.+..+++++.+++..||+.+|++|||+.||++.|+++.+
T Consensus       251 ~~~~v~~~-~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~  301 (301)
T d1lufa_         251 VIYYVRDG-NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  301 (301)
T ss_dssp             HHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHcC-CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            88888776 4556677899999999999999999999999999999998753

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-41  Score=265.58  Aligned_cols=174  Identities=17%  Similarity=0.242  Sum_probs=152.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|||||.+|+|..++...+               ++++..+..++.||++||.|||++|++||||||+||+++.++.+|
T Consensus        91 ~iv~E~~~~g~l~~~~~~~~---------------~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~K  155 (309)
T d1u5ra_          91 WLVMEYCLGSASDLLEVHKK---------------PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVK  155 (309)
T ss_dssp             EEEEECCSEEHHHHHHHHTS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEE
T ss_pred             EEEEEecCCCchHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEE
Confidence            38899999999987776543               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD---DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      |+|||++.....     .....||+.|+|||++.+   ..|+.++||||+||++|+|+ +|..||.+....+....+...
T Consensus       156 l~DFG~a~~~~~-----~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~-~g~~Pf~~~~~~~~~~~i~~~  229 (309)
T d1u5ra_         156 LGDFGSASIMAP-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNMNAMSALYHIAQN  229 (309)
T ss_dssp             ECCCTTCBSSSS-----BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCHHHHHHHHHHS
T ss_pred             EeecccccccCC-----CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHH-HCCCCCCCCCHHHHHHHHHhC
Confidence            999999975433     234678999999999853   45888999999999999999 799999998888877777776


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ......+..+++++++++.+||+.||.+|||++|+++|
T Consensus       230 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         230 ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             CCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence            55555566789999999999999999999999999864

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-42  Score=266.54  Aligned_cols=189  Identities=28%  Similarity=0.568  Sum_probs=155.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|+|.+++.....              .+++..++.++.|+++||.|||+.+++||||||+||+++.++.+
T Consensus       104 ~~lv~E~~~~g~l~~~~~~~~~--------------~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~  169 (311)
T d1r0pa_         104 PLVVLPYMKHGDLRNFIRNETH--------------NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV  169 (311)
T ss_dssp             EEEEEECCTTCBHHHHHHCTTC--------------CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCE
T ss_pred             eEEEEEEeecCchhhhhccccc--------------cchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCE
Confidence            3489999999999999986443              57889999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh---hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         97 KISLSGLSKDTYQKE---YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        97 ~l~df~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      ||+|||+++......   ........++..|+|||.+....++.++||||||+++|||++.+..|+...+.......+..
T Consensus       170 kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~  249 (311)
T d1r0pa_         170 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ  249 (311)
T ss_dssp             EECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHT
T ss_pred             EEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHc
Confidence            999999997654332   11223456788999999999999999999999999999999445544444455555666665


Q ss_pred             CcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhc
Q psy15108        174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND  220 (223)
Q Consensus       174 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  220 (223)
                      + .++..+..+++++.+++..||+.||++||++.||+++|++++.+-
T Consensus       250 g-~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~  295 (311)
T d1r0pa_         250 G-RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  295 (311)
T ss_dssp             T-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             C-CCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhh
Confidence            5 455667788999999999999999999999999999999988653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-41  Score=263.26  Aligned_cols=175  Identities=17%  Similarity=0.262  Sum_probs=155.4

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|||||++|+|.+++...+.               ++++.+..++.||+.||.|||++|++||||||+||+++.++.+|+
T Consensus        82 iv~ey~~gg~L~~~~~~~~~---------------~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl  146 (337)
T d1o6la_          82 FVMEYANGGELFFHLSRERV---------------FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI  146 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSC---------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             cceeccCCCchhhhhhcccC---------------CcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEE
Confidence            89999999999999987654               999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW  178 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~  178 (223)
                      +|||+++....... ......||+.|+|||++.+..|+.++|+||+||++|+|+ +|..||.+.+..+....+.....  
T Consensus       147 ~DFG~a~~~~~~~~-~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml-~G~~pf~~~~~~~~~~~i~~~~~--  222 (337)
T d1o6la_         147 TDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGRLPFYNQDHERLFELILMEEI--  222 (337)
T ss_dssp             CCCTTCBCSCCTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHCCC--
T ss_pred             eecccccccccCCc-ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHH-HCCCCCCCcCHHHHHHHHhcCCC--
Confidence            99999975433221 234467899999999999999999999999999999999 79999999999888888877654  


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        179 KHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       179 ~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                      ..+..++++++++|.+||+.||.+|++     ++++++|
T Consensus       223 ~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         223 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence            446778999999999999999999995     7888875

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-41  Score=263.42  Aligned_cols=199  Identities=27%  Similarity=0.451  Sum_probs=162.0

Q ss_pred             CCCCCCCCCCChHHHHHHhhhcccc-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKD-KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      .+||||+++|+|.++|+.+...... ...........+++..+..++.||+.|+.|||+.+++||||||+||+++.++.+
T Consensus        87 ~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          87 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCE
T ss_pred             EEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCce
Confidence            3789999999999999754210000 000000123569999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++......  ......++..|++||.+....++.++|||||||++|||++.+..||.+.+..++...+..+ .
T Consensus       167 kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~-~  243 (309)
T d1fvra_         167 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-Y  243 (309)
T ss_dssp             EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT-C
T ss_pred             EEccccccccccccc--cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhc-C
Confidence            999999987543322  1223457888999999999999999999999999999995567789999988888887766 4


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      +++.+..+++++.++|.+||+.||++|||+++++++|++++++
T Consensus       244 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         244 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            5666778999999999999999999999999999999998854

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-41  Score=264.42  Aligned_cols=181  Identities=17%  Similarity=0.256  Sum_probs=144.8

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~   95 (223)
                      ..+||||+++|+|.+++++.+.               +++..+..++.|+++||.|||+ +||+||||||+||+++.++.
T Consensus        79 ~~iVmEy~~gg~L~~~l~~~~~---------------l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~  143 (322)
T d1s9ja_          79 ISICMEHMDGGSLDQVLKKAGR---------------IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE  143 (322)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSS---------------CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCC
T ss_pred             EEEEEEcCCCCcHHHHHhhcCC---------------CCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCC
Confidence            3489999999999999987644               9999999999999999999997 59999999999999999999


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH--------
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV--------  167 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~--------  167 (223)
                      +||+|||+|+.....   ......||+.|+|||++.+..|+.++||||+||++|||+ +|+.||.+.+....        
T Consensus       144 vkl~DFGla~~~~~~---~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell-~G~~Pf~~~~~~~~~~~~~~~~  219 (322)
T d1s9ja_         144 IKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA-VGRYPIPPPDAKELELMFGCQV  219 (322)
T ss_dssp             EEECCCCCCHHHHHH---TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHH-HSSCCSSCCCTTHHHHHC----
T ss_pred             EEEeeCCCccccCCC---ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHHHh
Confidence            999999999754332   234568899999999999999999999999999999999 79999976543221        


Q ss_pred             ----------------------------------HHHHHhCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH-
Q psy15108        168 ----------------------------------LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ-  212 (223)
Q Consensus       168 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~-  212 (223)
                                                        ...+.............+.++.+++.+||+.||++|||++|+++| 
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hp  299 (322)
T d1s9ja_         220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA  299 (322)
T ss_dssp             --------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             cCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCH
Confidence                                              111111111111112357889999999999999999999999986 


Q ss_pred             -HHHH
Q psy15108        213 -LSDA  216 (223)
Q Consensus       213 -L~~~  216 (223)
                       +++.
T Consensus       300 f~~~~  304 (322)
T d1s9ja_         300 FIKRS  304 (322)
T ss_dssp             HHHHH
T ss_pred             hhCcC
Confidence             5443

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.8e-41  Score=267.29  Aligned_cols=179  Identities=18%  Similarity=0.216  Sum_probs=154.5

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec--CC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS--DL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~--~~   94 (223)
                      .-+|||||++|+|.+++...+              +.+++..+..++.||+.||.|||++|++||||||+||+++.  ++
T Consensus        98 ~~ivmE~~~gg~L~~~l~~~~--------------~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~  163 (350)
T d1koaa2          98 MVMIYEFMSGGELFEKVADEH--------------NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN  163 (350)
T ss_dssp             EEEEECCCCSCBHHHHHTCTT--------------SCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSC
T ss_pred             EEEEEEcCCCCCHHHHHHhhc--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCC
Confidence            338999999999999996432              35999999999999999999999999999999999999964  57


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .+||+|||+++......  ......+|+.|+|||++.+..++.++||||+||++|+|+ +|..||.+.+..+.+..+...
T Consensus       164 ~vkL~DFG~a~~~~~~~--~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell-~G~~Pf~~~~~~~~~~~i~~~  240 (350)
T d1koaa2         164 ELKLIDFGLTAHLDPKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL-SGLSPFGGENDDETLRNVKSC  240 (350)
T ss_dssp             CEEECCCTTCEECCTTS--CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHT
T ss_pred             eEEEeecchheeccccc--ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHH-hCCCCCCCCCHHHHHHHHHhC
Confidence            89999999997654332  223467899999999999999999999999999999999 699999999888888888776


Q ss_pred             cccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....+.  ...+++++++++.+||+.||++|||++|+++|
T Consensus       241 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         241 DWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             CCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             CCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            544332  24578999999999999999999999999986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-41  Score=261.67  Aligned_cols=206  Identities=27%  Similarity=0.477  Sum_probs=166.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhcccc---CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKD---KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~---~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~   93 (223)
                      ..++||||++|+|.++|+........   .+.........+++..+..++.||++|+.|||+++++||||||+||+++.+
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~  181 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG  181 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccccc
Confidence            44789999999999999876531111   111222344579999999999999999999999999999999999999999


Q ss_pred             CCeEEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy15108         94 LSVKISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE  172 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~  172 (223)
                      +.++++|||.++...... ........+++.|+|||.+....++.++||||||+++|||++.|..||...+..+.+..+.
T Consensus       182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i  261 (311)
T d1t46a_         182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI  261 (311)
T ss_dssp             TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred             CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            999999999998654332 2223345778999999999989999999999999999999966787787777666655555


Q ss_pred             hCcccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhhccC
Q psy15108        173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN  222 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~  222 (223)
                      ....++..+..+++++.+||.+||+.||++|||++++++.|++.+.++-|
T Consensus       262 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~~~~  311 (311)
T d1t46a_         262 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN  311 (311)
T ss_dssp             HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTCC
T ss_pred             hcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhccCCC
Confidence            54466667778899999999999999999999999999999998877644

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.7e-41  Score=266.84  Aligned_cols=179  Identities=18%  Similarity=0.217  Sum_probs=155.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeee--cCC
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS--SDL   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~--~~~   94 (223)
                      ..+|||||.+|+|.+++...+              .++++.++..++.||+.||.|||++|++||||||.|||++  .++
T Consensus       101 ~~ivmE~~~gg~L~~~~~~~~--------------~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~  166 (352)
T d1koba_         101 MVLILEFLSGGELFDRIAAED--------------YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKAS  166 (352)
T ss_dssp             EEEEEECCCCCBHHHHTTCTT--------------CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCC
T ss_pred             EEEEEEcCCCChHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCC
Confidence            348999999999999886543              3699999999999999999999999999999999999997  568


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .+||+|||++.......  ......+++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.+..+....+...
T Consensus       167 ~vkL~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell-tG~~Pf~~~~~~~~~~~i~~~  243 (352)
T d1koba_         167 SVKIIDFGLATKLNPDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLL-SGLSPFAGEDDLETLQNVKRC  243 (352)
T ss_dssp             CEEECCCTTCEECCTTS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHH-HSCCSSCCSSHHHHHHHHHHC
T ss_pred             eEEEeecccceecCCCC--ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhC
Confidence            89999999997654432  223457789999999999999999999999999999999 799999999998888888776


Q ss_pred             cccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...++  ....+++++.+++.+||+.||.+|||++|+++|
T Consensus       244 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         244 DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             CCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            54433  335789999999999999999999999999875

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-41  Score=259.08  Aligned_cols=177  Identities=16%  Similarity=0.241  Sum_probs=154.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC---
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---   94 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~---   94 (223)
                      .+|||||++|+|.++|+..+.               +++..+..++.|+++||.|||+.+++||||||+||+++.++   
T Consensus        89 ~iv~E~~~gg~L~~~i~~~~~---------------l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~  153 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEKES---------------LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK  153 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHHSS---------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSS
T ss_pred             EEEEEcCCCccccchhccccc---------------cchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcc
Confidence            388999999999999987644               99999999999999999999999999999999999998775   


Q ss_pred             -CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         95 -SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        95 -~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                       .+|++|||++.......  ......+++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.+..+....+..
T Consensus       154 ~~vkl~DfG~a~~~~~~~--~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell-~g~~Pf~~~~~~~~~~~i~~  230 (293)
T d1jksa_         154 PRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL-SGASPFLGDTKQETLANVSA  230 (293)
T ss_dssp             CCEEECCCTTCEECTTSC--BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHT
T ss_pred             cceEecchhhhhhcCCCc--cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHH-cCCCCCCCCCHHHHHHHHHh
Confidence             48999999997654332  234457788999999999888999999999999999999 79999999998888888877


Q ss_pred             CcccCC--CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 KKLCWK--HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .....+  .+..+++++++++.+||+.||++|||++|+++|
T Consensus       231 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         231 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             TCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            654433  235688999999999999999999999999875

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2e-40  Score=254.64  Aligned_cols=177  Identities=16%  Similarity=0.243  Sum_probs=153.3

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+++|||.++|+.++               ++++.++..++.||++||+|||++|++||||||+||+++.++.+|
T Consensus        86 ~ivmE~~~~g~L~~~l~~~~---------------~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~k  150 (277)
T d1phka_          86 FLVFDLMKKGELFDYLTEKV---------------TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIK  150 (277)
T ss_dssp             EEEEECCTTCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred             EEEEEcCCCchHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeE
Confidence            38999999999999998764               499999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccc------cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVF------DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL  171 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~------~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~  171 (223)
                      |+|||++.......  ......++..|.+||.+.      ...++.++||||+||++|+|+ +|+.||.+.+.......+
T Consensus       151 l~DFG~a~~~~~~~--~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml-~g~~Pf~~~~~~~~~~~i  227 (277)
T d1phka_         151 LTDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL-AGSPPFWHRKQMLMLRMI  227 (277)
T ss_dssp             ECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHH
T ss_pred             EccchheeEccCCC--ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhc-cCCCCCCCCCHHHHHHHH
Confidence            99999997654432  234467889999999875      234678999999999999999 699999999988888887


Q ss_pred             HhCcccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        172 ESKKLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       172 ~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..+...++.  ...+++++++++.+||+.||++||+++|+++|
T Consensus       228 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         228 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             HHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            776554333  34689999999999999999999999999875

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-40  Score=255.24  Aligned_cols=197  Identities=30%  Similarity=0.572  Sum_probs=166.9

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|+||+.+|+|.+++...+......     .....+++..+..++.|+++||.|||+++++||||||.||+++.++.+
T Consensus        98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~  172 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRSLRPAMANN-----PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  172 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHC-----TTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred             eeEEEeecCCCCHHHHHHhcccccccc-----cccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceE
Confidence            458899999999999998664321111     112357999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhh-hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ||+|||+++...... ........+++.|++||.+.+..++.++||||||+++|||++.+..||.+.+..+....+..+ 
T Consensus       173 Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~-  251 (308)
T d1p4oa_         173 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG-  251 (308)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT-
T ss_pred             EEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC-
Confidence            999999998654433 222334567899999999999999999999999999999997668999999999998888776 


Q ss_pred             ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ..+..+..+++.+.+++.+||+.+|++|||+++++++|++.+++
T Consensus       252 ~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~  295 (308)
T d1p4oa_         252 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP  295 (308)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred             CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence            45666778999999999999999999999999999999887654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.6e-40  Score=255.92  Aligned_cols=174  Identities=20%  Similarity=0.232  Sum_probs=155.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||.+|+|.+++.....               +++..+..++.||+.||.|||++||+||||||+||+++.++.+
T Consensus        79 ~~ivmE~~~gg~l~~~~~~~~~---------------~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~v  143 (316)
T d1fota_          79 IFMIMDYIEGGELFSLLRKSQR---------------FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHI  143 (316)
T ss_dssp             EEEEECCCCSCBHHHHHHHTSS---------------CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCE
T ss_pred             eeeEeeecCCcccccccccccc---------------ccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCE
Confidence            3488999999999999987644               8999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ||+|||+++.....    .....|++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.+..+....+.....
T Consensus       144 kL~DFG~a~~~~~~----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyeml-tG~~Pf~~~~~~~~~~~i~~~~~  218 (316)
T d1fota_         144 KITDFGFAKYVPDV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML-AGYTPFYDSNTMKTYEKILNAEL  218 (316)
T ss_dssp             EECCCSSCEECSSC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHHHHCCC
T ss_pred             EEecCccceEeccc----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHH-hCCCCCCCcCHHHHHHHHHcCCC
Confidence            99999999765432    23467899999999999889999999999999999999 79999999999888888877643


Q ss_pred             cCCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        177 CWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       177 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                        ..+..+++++.+++.+||+.||.+|+     +++++++|
T Consensus       219 --~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         219 --RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             --CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             --CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence              34567899999999999999999996     89999876

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.9e-40  Score=253.04  Aligned_cols=183  Identities=19%  Similarity=0.243  Sum_probs=150.7

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +||||+++|+|.+++...+.               +++.+++.++.||++||.|||++|++||||||+||+++.++..++
T Consensus        88 lvmE~~~g~~L~~~~~~~~~---------------l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l  152 (277)
T d1o6ya_          88 IVMEYVDGVTLRDIVHTEGP---------------MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKV  152 (277)
T ss_dssp             EEEECCCEEEHHHHHHHHCS---------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEE
T ss_pred             EEEECCCCCEehhhhcccCC---------------CCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCcccccee
Confidence            89999999999999987644               999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhh--hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         99 SLSGLSKDTYQKE--YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        99 ~df~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      +|||.+.......  ........+++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.+..+....+.....
T Consensus       153 ~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyell-tG~~Pf~~~~~~~~~~~~~~~~~  231 (277)
T d1o6ya_         153 MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL-TGEPPFTGDSPVSVAYQHVREDP  231 (277)
T ss_dssp             CCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHCCC
T ss_pred             ehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHH-hCCCCCCCcCHHHHHHHHHhcCC
Confidence            9999886543222  22334567899999999999888999999999999999999 79999999888777766655433


Q ss_pred             cC--CCCCCChHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHh
Q psy15108        177 CW--KHSSKTPEYITSLHEKCIHPHPHQRP-TFPSIVTQLSDAM  217 (223)
Q Consensus       177 ~~--~~~~~~~~~~~~li~~~l~~dp~~Rp-s~~~ll~~L~~~~  217 (223)
                      .+  .....+|+++.+++.+||+.||.+|| ++++++..|.++.
T Consensus       232 ~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         232 IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             CCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             CCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            32  23457899999999999999999999 8999999988764

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-40  Score=262.83  Aligned_cols=180  Identities=13%  Similarity=0.235  Sum_probs=145.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec---C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---D   93 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~---~   93 (223)
                      .-+|||||++|||.++|+.++.             ..+++.++..++.||+.||.|||+.|++||||||+||+++.   .
T Consensus        84 ~~ivmEy~~gg~L~~~i~~~~~-------------~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~  150 (335)
T d2ozaa1          84 LLIVMECLDGGELFSRIQDRGD-------------QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPN  150 (335)
T ss_dssp             EEEEEECCCSEEHHHHHHSCSC-------------CCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTT
T ss_pred             EEEEEECCCCCcHHHHHHhcCC-------------CCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccc
Confidence            3489999999999999986533             46999999999999999999999999999999999999985   4


Q ss_pred             CCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Q psy15108         94 LSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES  173 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~  173 (223)
                      +.+|++|||+++......  ......+++.|+|||.+.+..|+.++||||+||++|+|+ +|..||.+.+.......+..
T Consensus       151 ~~~Kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~ll-tg~~Pf~~~~~~~~~~~~~~  227 (335)
T d2ozaa1         151 AILKLTDFGFAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL-CGYPPFYSNHGLAISPGMKT  227 (335)
T ss_dssp             CCEEECCCTTCEECCCCC--CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHT-TSSCSCEETTCC--------
T ss_pred             ccccccccceeeeccCCC--ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHh-hCCCCCCCCCHHHHHHHHHH
Confidence            569999999997654332  234567899999999999889999999999999999999 89999987765544443332


Q ss_pred             C----cccCCCC--CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 K----KLCWKHS--SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 ~----~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .    ....+.+  ..+++++.+++.+||+.||++|||+.|+++|
T Consensus       228 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         228 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            2    1222111  2467889999999999999999999999886

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.4e-40  Score=260.03  Aligned_cols=173  Identities=19%  Similarity=0.200  Sum_probs=154.4

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+|++|+.+|+|.+++...+.               +++..+..++.||+.||.|||++|++||||||+|||++.++.+|
T Consensus       117 ~~v~e~~~~g~l~~~l~~~~~---------------l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ik  181 (350)
T d1rdqe_         117 YMVMEYVAGGEMFSHLRRIGR---------------FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ  181 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHHCC---------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             ccccccccccchhhhHhhcCC---------------CCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEE
Confidence            378999999999999987644               99999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      |+|||+++.....    .....|++.|+|||++.+..++.++||||+||++|+|+ +|..||.+.+.......+..... 
T Consensus       182 L~DFG~a~~~~~~----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyeml-tG~~Pf~~~~~~~~~~~i~~~~~-  255 (350)
T d1rdqe_         182 VTDFGFAKRVKGR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA-AGYPPFFADQPIQIYEKIVSGKV-  255 (350)
T ss_dssp             ECCCTTCEECSSC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHCCC-
T ss_pred             eeeceeeeecccc----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHH-hCCCCCCCcCHHHHHHHHhcCCC-
Confidence            9999999765432    23467889999999999999999999999999999999 79999999998888888877643 


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q psy15108        178 WKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSIVTQ  212 (223)
Q Consensus       178 ~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~ll~~  212 (223)
                       ..+..+++++.+++.+||+.||.+|+     +++++++|
T Consensus       256 -~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         256 -RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             -CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             -CCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence             34567899999999999999999994     89999875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-40  Score=259.28  Aligned_cols=175  Identities=18%  Similarity=0.275  Sum_probs=154.5

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +||||+++|+|.++++..+.               +++..+..++.||+.||.|||+++++||||||+|||++.++.+|+
T Consensus        80 ivmEy~~~g~L~~~i~~~~~---------------~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl  144 (320)
T d1xjda_          80 FVMEYLNGGDLMYHIQSCHK---------------FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKI  144 (320)
T ss_dssp             EEEECCTTCBHHHHHHHHSS---------------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             EEEeecCCCcHHHHhhccCC---------------CCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceec
Confidence            89999999999999987644               999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcccC
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW  178 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~  178 (223)
                      +|||+++...... .......+++.|+|||.+.+..++.++||||+||++|+|+ +|..||.+.+..+....+....+  
T Consensus       145 ~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyeml-tG~~PF~~~~~~~~~~~i~~~~~--  220 (320)
T d1xjda_         145 ADFGMCKENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML-IGQSPFHGQDEEELFHSIRMDNP--  220 (320)
T ss_dssp             CCCTTCBCCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHCCC--
T ss_pred             cccchhhhccccc-ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHH-hCCCCCCCCCHHHHHHHHHcCCC--
Confidence            9999997544322 1234467899999999999999999999999999999999 79999999999888888876643  


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCCCCHH-HHHHH
Q psy15108        179 KHSSKTPEYITSLHEKCIHPHPHQRPTFP-SIVTQ  212 (223)
Q Consensus       179 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~-~ll~~  212 (223)
                      ..+..+++++.+++.+||+.||.+||++. ++++|
T Consensus       221 ~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~h  255 (320)
T d1xjda_         221 FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH  255 (320)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhC
Confidence            44567899999999999999999999995 67653

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1e-39  Score=259.71  Aligned_cols=177  Identities=18%  Similarity=0.246  Sum_probs=147.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+|||||++|+|.++|+..+.               +++..+..++.||+.||.|||++|++||||||+|||++.++.+
T Consensus        82 ~~ivmE~~~gg~L~~~l~~~~~---------------~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~i  146 (364)
T d1omwa3          82 LSFILDLMNGGDLHYHLSQHGV---------------FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHV  146 (364)
T ss_dssp             EEEEECCCCSCBHHHHHHHHCS---------------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCE
T ss_pred             EEEEEEecCCCcHHHHHHhccc---------------ccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcE
Confidence            3388999999999999987644               8999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-C
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES-K  174 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~-~  174 (223)
                      ||+|||+++......   .....||+.|+|||.+.. ..++.++||||+||++|+|+ +|..||.+............ .
T Consensus       147 Kl~DFGla~~~~~~~---~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyeml-tG~~Pf~~~~~~~~~~~~~~~~  222 (364)
T d1omwa3         147 RISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-RGHSPFRQHKTKDKHEIDRMTL  222 (364)
T ss_dssp             EECCCTTCEECSSSC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHH-HSSCSSCSSCSSCHHHHHHHSS
T ss_pred             EEeeeceeeecCCCc---ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhcc
Confidence            999999997654332   244678999999999864 56899999999999999999 79999986553322222211 1


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                      ......+..+++++.++|.+||+.||.+||+     ++++++|
T Consensus       223 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         223 TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             SCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             cCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            1334445678999999999999999999999     6888865

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-40  Score=256.38  Aligned_cols=179  Identities=15%  Similarity=0.182  Sum_probs=154.0

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC--C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD--L   94 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~--~   94 (223)
                      .-+|||||.+|+|.++|+..+              ..+++.++..++.||++||.|||+.|++||||||+||+++.+  .
T Consensus        76 ~~lvmE~~~gg~L~~~i~~~~--------------~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~  141 (321)
T d1tkia_          76 LVMIFEFISGLDIFERINTSA--------------FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSS  141 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTSSS--------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCC
T ss_pred             EEEEEecCCCCcHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCce
Confidence            348999999999999997543              259999999999999999999999999999999999999854  5


Q ss_pred             CeEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         95 SVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        95 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      .++++|||++.......  ......+++.|++||...+..++.++||||+||++|+|+ +|..||.+.+..+....+...
T Consensus       142 ~ikl~DFG~~~~~~~~~--~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll-~G~~Pf~~~~~~~~~~~i~~~  218 (321)
T d1tkia_         142 TIKIIEFGQARQLKPGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLL-SGINPFLAETNQQIIENIMNA  218 (321)
T ss_dssp             CEEECCCTTCEECCTTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHH-HSSCTTCCSSHHHHHHHHHHT
T ss_pred             EEEEcccchhhccccCC--cccccccccccccchhccCCCCCchhhcccHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhC
Confidence            78999999997654332  223456788999999998888999999999999999999 799999999998888888776


Q ss_pred             cccCCC--CCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKH--SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ...++.  ...+++++++++.+||..||.+|||++|+++|
T Consensus       219 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         219 EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            544332  24678999999999999999999999999985

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-38  Score=244.90  Aligned_cols=177  Identities=19%  Similarity=0.256  Sum_probs=147.6

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +++||+.+|++........              ..+++..+..++.|++.||.|||+++|+||||||+|||++..+.+++
T Consensus        92 ~~~e~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl  157 (305)
T d1blxa_          92 LVFEHVDQDLTTYLDKVPE--------------PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL  157 (305)
T ss_dssp             EEEECCSCBHHHHHHHSCT--------------TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             EEEEeccCCchhhhhhccC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeee
Confidence            6788998887765554332              46899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc--
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL--  176 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~--  176 (223)
                      +|||++.......  ......+|+.|+|||.+.+.+++.++||||+||++|+|+ +|..||.+.+..+.+..+.....  
T Consensus       158 ~dfg~~~~~~~~~--~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~~~  234 (305)
T d1blxa_         158 ADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKPLFRGSSDVDQLGKILDVIGLP  234 (305)
T ss_dssp             CSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             cchhhhhhhcccc--cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHH-HCCCCCCCCCHHHHHHHHHHhhCCC
Confidence            9999987554333  345678899999999999999999999999999999999 79999998887776665533100  


Q ss_pred             -----------------------cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 -----------------------CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 -----------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                             ........++.+++|+.+||+.||++|||++|+++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         235 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             chhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                                   001234567889999999999999999999999876

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-38  Score=246.21  Aligned_cols=179  Identities=17%  Similarity=0.134  Sum_probs=145.6

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ..+||||+.++++..++...               ..+++..+..++.||++||.|||++|++||||||+||+++.++.+
T Consensus        75 ~~ivmE~~~~~~~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~  139 (299)
T d1ua2a_          75 ISLVFDFMETDLEVIIKDNS---------------LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVL  139 (299)
T ss_dssp             CEEEEECCSEEHHHHHTTCC---------------SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCE
T ss_pred             eeehhhhhcchHHhhhhhcc---------------cCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCcc
Confidence            44889999999887776533               359999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ||+|||++....... .......+++.|+|||.+... .++.++||||+||++|+|+ +|..||.+....+.+..+....
T Consensus       140 KL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~-~g~~pf~~~~~~~~l~~i~~~~  217 (299)
T d1ua2a_         140 KLADFGLAKSFGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL-LRVPFLPGDSDLDQLTRIFETL  217 (299)
T ss_dssp             EECCCGGGSTTTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHHH
T ss_pred             ccccCccccccCCCc-ccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHH-hCcCCCCCCCHHHHHHHHHHhc
Confidence            999999997544322 122345788999999998654 5789999999999999999 6899999888877666654311


Q ss_pred             ccCC--------------------------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWK--------------------------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~--------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ..+.                          .....++++.+|+.+||+.||++|||++|+++|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         218 GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             CCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence            0000                          012457889999999999999999999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-38  Score=241.82  Aligned_cols=168  Identities=19%  Similarity=0.257  Sum_probs=140.4

Q ss_pred             CCCCCCCCC-CChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecC-CC
Q psy15108         18 SGSGKPRVK-GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LS   95 (223)
Q Consensus        18 ~~v~~~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~-~~   95 (223)
                      -+||||+.+ +++.+++...+               .+++..+..++.||++||.|||++|++||||||+||+++.+ +.
T Consensus        85 ~lv~e~~~~~~~l~~~~~~~~---------------~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~  149 (273)
T d1xwsa_          85 VLILERPEPVQDLFDFITERG---------------ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE  149 (273)
T ss_dssp             EEEEECCSSEEEHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTE
T ss_pred             EEEEEeccCcchHHHHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCe
Confidence            378999976 68899998754               49999999999999999999999999999999999999865 78


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEF-STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      ++++|||++......   ......||+.|+|||.+.+..+ +.++||||+||++|+|+ +|..||...+      .+...
T Consensus       150 vkl~DFG~a~~~~~~---~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell-~g~~Pf~~~~------~i~~~  219 (273)
T d1xwsa_         150 LKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV-CGDIPFEHDE------EIIRG  219 (273)
T ss_dssp             EEECCCTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHH-HSSCSCCSHH------HHHHC
T ss_pred             EEECccccceecccc---cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHh-hCCCCCCCch------HHhhc
Confidence            999999999754332   2345678999999999887765 56789999999999999 7999997532      22332


Q ss_pred             cccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      .  ...+..+++++++++.+||+.||++|||++|+++|
T Consensus       220 ~--~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         220 Q--VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             C--CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             c--cCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            2  33456789999999999999999999999999875

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-37  Score=241.01  Aligned_cols=185  Identities=18%  Similarity=0.186  Sum_probs=142.5

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc--------CCcccCCCCCCCee
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD--------KRLIHKDIAARNCL   89 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--------~~i~H~di~~~nil   89 (223)
                      -+||||+.+|+|.++|++.                ++++.+++.++.|++.|+.|+|+        +||+||||||+||+
T Consensus        77 ~lv~Ey~~~g~L~~~l~~~----------------~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NIL  140 (303)
T d1vjya_          77 WLVSDYHEHGSLFDYLNRY----------------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL  140 (303)
T ss_dssp             EEEEECCTTCBHHHHHHHC----------------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEE
T ss_pred             EEEEecccCCCHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceE
Confidence            3799999999999999753                48999999999999999999996        59999999999999


Q ss_pred             eecCCCeEEcCCCCCcccchhh---hhhhhcCCcccccccccccccCC------CCcccchHHHHHHHHHHHhCCCCCCC
Q psy15108         90 ISSDLSVKISLSGLSKDTYQKE---YYKYRNAILPLRWLPYEAVFDDE------FSTKSDVYAYACLIWEIFNKGEMPFP  160 (223)
Q Consensus        90 ~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~------~~~~~Di~slG~il~~l~~~~~~p~~  160 (223)
                      ++.++.+||+|||++.......   ........+++.|+|||.+....      ++.++|||||||++|||+ +|..|+.
T Consensus       141 l~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~-tg~~~~~  219 (303)
T d1vjya_         141 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA-RRCSIGG  219 (303)
T ss_dssp             ECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHH-HTBCBTT
T ss_pred             EcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHh-hCCCCCC
Confidence            9999999999999997654332   11234567899999999986542      466899999999999999 5765542


Q ss_pred             C---------------CCHHHHHHHHHhCcccCCCCC-----CChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        161 D---------------LSDDQVLSQLESKKLCWKHSS-----KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       161 ~---------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      .               .........+.....++..+.     ..+..+.+++.+||+.||++|||+.|++++|+++.++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         220 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             BCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence            1               122233333333333332222     2335688999999999999999999999999988754

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.1e-37  Score=238.59  Aligned_cols=184  Identities=17%  Similarity=0.198  Sum_probs=143.5

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec---CCC
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLS   95 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~---~~~   95 (223)
                      +||||+ +|+|.+.+.....              .+++..+..++.|++.||+|||++|++||||||+||+++.   +..
T Consensus        80 ivme~~-~~~l~~~~~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~  144 (299)
T d1ckia_          80 MVMELL-GPSLEDLFNFCSR--------------KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNL  144 (299)
T ss_dssp             EEEECC-CCBHHHHHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTC
T ss_pred             EEEEEc-CCchhhhhhhccC--------------CCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCce
Confidence            567766 6777777765433              6999999999999999999999999999999999998753   456


Q ss_pred             eEEcCCCCCcccchhh------hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy15108         96 VKISLSGLSKDTYQKE------YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS  169 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~  169 (223)
                      ++++|||+++......      ........+|+.|+|||.+.+..++.++|||||||++|+|+ +|..||..........
T Consensus       145 vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~-tg~~P~~~~~~~~~~~  223 (299)
T d1ckia_         145 VYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN-LGSLPWQGLKAATKRQ  223 (299)
T ss_dssp             EEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHH-HSSCTTCCCC------
T ss_pred             eeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHH-hCCCcccccchHHHHH
Confidence            9999999998654332      11234457899999999999999999999999999999999 7999998765443322


Q ss_pred             HH---HhCcc---cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhh
Q psy15108        170 QL---ESKKL---CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC  218 (223)
Q Consensus       170 ~~---~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  218 (223)
                      .+   .....   .......+|+++.+++..||+.+|++||+++++.+.|+.++.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         224 KYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             -HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            22   11111   111245788999999999999999999999999988887754

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-37  Score=239.50  Aligned_cols=179  Identities=17%  Similarity=0.214  Sum_probs=148.2

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      ..++||+.+|+|.+++...+.               +++..+..++.||+.|+.|+|+++++||||||+||+++.++.++
T Consensus       105 ~~v~e~~~~~~L~~~i~~~~~---------------~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vk  169 (322)
T d1vzoa_         105 HLILDYINGGELFTHLSQRER---------------FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV  169 (322)
T ss_dssp             EEEECCCCSCBHHHHHHHHSC---------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             eeeeecccccHHHHHHHhccc---------------ccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEE
Confidence            378999999999999987654               89999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccCC--CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      ++|||+++..............+++.|++||.+....  ++.++||||+||++|+|+ +|..||.+.........+....
T Consensus       170 L~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyell-tG~~PF~~~~~~~~~~~i~~~~  248 (322)
T d1vzoa_         170 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL-TGASPFTVDGEKNSQAEISRRI  248 (322)
T ss_dssp             ESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHH-HSSCTTSCTTSCCCHHHHHHHH
T ss_pred             EeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHhc
Confidence            9999999766555444445667888999999987543  677899999999999999 7999997765443333332221


Q ss_pred             --ccCCCCCCChHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q psy15108        176 --LCWKHSSKTPEYITSLHEKCIHPHPHQRPT-----FPSIVTQ  212 (223)
Q Consensus       176 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~  212 (223)
                        ..++.+..+++++.+++.+||+.||++||+     ++|+++|
T Consensus       249 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         249 LKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             ccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence              234445678999999999999999999994     7888874

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.4e-36  Score=234.01  Aligned_cols=185  Identities=17%  Similarity=0.189  Sum_probs=149.2

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeec-----C
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-----D   93 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~-----~   93 (223)
                      +||||+ +|+|.++++..+.              .+++..+..++.|++.||.|||++|++||||||.||+++.     .
T Consensus        78 ~vme~~-~~~l~~~~~~~~~--------------~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~  142 (293)
T d1csna_          78 LVIDLL-GPSLEDLLDLCGR--------------KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNA  142 (293)
T ss_dssp             EEEECC-CCBHHHHHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTT
T ss_pred             EEEEec-CCCHHHHHHhhcc--------------chhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccC
Confidence            677776 7999999987543              6999999999999999999999999999999999999974     4


Q ss_pred             CCeEEcCCCCCcccchhh------hhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---H
Q psy15108         94 LSVKISLSGLSKDTYQKE------YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS---D  164 (223)
Q Consensus        94 ~~~~l~df~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~---~  164 (223)
                      +.++++|||+++......      ........||+.|+|||.+.+..++.++|||||||++|+|+ +|..||.+..   .
T Consensus       143 ~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell-tg~~Pf~~~~~~~~  221 (293)
T d1csna_         143 NMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL-RGSLPWQGLKAATN  221 (293)
T ss_dssp             TCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTSSCCSCCH
T ss_pred             CceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHH-hCCCcCCCccchhH
Confidence            679999999998654321      11233457899999999999999999999999999999999 7999997553   3


Q ss_pred             HHHHHHHHhCcc---cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhhh
Q psy15108        165 DQVLSQLESKKL---CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN  219 (223)
Q Consensus       165 ~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  219 (223)
                      ......+.....   .......+|+++.+++..|++.+|++||+++.+.+.|++++++
T Consensus       222 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~  279 (293)
T d1csna_         222 KQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  279 (293)
T ss_dssp             HHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHH
Confidence            333333322211   1122456889999999999999999999999999998887653

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-36  Score=238.01  Aligned_cols=177  Identities=18%  Similarity=0.261  Sum_probs=142.5

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      .+++|+.+|+|.++++.                ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        87 ~l~~~~~~g~L~~~l~~----------------~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl  150 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKT----------------QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI  150 (345)
T ss_dssp             EEEEECCCEEHHHHHHH----------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             EEEEeecCCchhhhhhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEE
Confidence            45688999999999974                25899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhh--hhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         99 SLSGLSKDTYQKEY--YKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        99 ~df~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +|||++........  .......+++.|+|||.+.. ..++.++|+||+||++++|+ +|..||.+.+............
T Consensus       151 ~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml-~g~~pf~~~~~~~~~~~~~~~~  229 (345)
T d1pmea_         151 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGIL  229 (345)
T ss_dssp             CCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHH
T ss_pred             cccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHh-hCCCCCCCCCHHHHHHHHhhhc
Confidence            99999976544321  12345678899999999854 45788999999999999999 7999998776544433321100


Q ss_pred             --------------------ccC---------CCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 --------------------LCW---------KHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 --------------------~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                          ...         ......+.++++++.+||+.||.+|||++|+++|
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         230 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             CSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                                000         0123556789999999999999999999999986

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-36  Score=235.50  Aligned_cols=178  Identities=19%  Similarity=0.254  Sum_probs=141.2

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +||||+.++ +.+++.....             ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+|+
T Consensus        78 iv~e~~~~~-~~~~~~~~~~-------------~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl  143 (298)
T d1gz8a_          78 LVFEFLHQD-LKKFMDASAL-------------TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL  143 (298)
T ss_dssp             EEEECCSEE-HHHHHHHTTT-------------TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             EEEeecCCc-hhhhhhhhcc-------------cCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCccee
Confidence            788888754 5555544332             46999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      +|||+++...... .......+++.|+|||...... ++.++|+||+||++|+|+ +|+.||.+.+.......+......
T Consensus       144 ~DFG~a~~~~~~~-~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~-~G~~Pf~~~~~~~~~~~i~~~~~~  221 (298)
T d1gz8a_         144 ADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRALFPGDSEIDQLFRIFRTLGT  221 (298)
T ss_dssp             CSTTHHHHHCCCS-BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             ccCCcceeccCCc-ccceeecccceeeehhhhccccCCCccccccccchhhhHHh-hCCCCCCCCCHHHHHHHHHHhcCC
Confidence            9999986543221 2234457889999999877666 478999999999999999 699999988876655554321000


Q ss_pred             CC---------------------------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 WK---------------------------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ~~---------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      +.                           .....++++++++.+||+.||++|||++|+++|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             CCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            00                           012456889999999999999999999999987

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-36  Score=236.35  Aligned_cols=179  Identities=19%  Similarity=0.200  Sum_probs=141.0

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC-CeE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-SVK   97 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~-~~~   97 (223)
                      +|||||.+|.+..+......            ...+++.++..++.||++||+|||++||+||||||+|||++.++ .+|
T Consensus        96 lv~Ey~~~~~~~~l~~~~~~------------~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~k  163 (350)
T d1q5ka_          96 LVLDYVPETVYRVARHYSRA------------KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK  163 (350)
T ss_dssp             EEEECCSEEHHHHHHHHHHT------------TCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEE
T ss_pred             EEEeccCCccHHHHHhhhhc------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCcee
Confidence            78999987654444432221            24699999999999999999999999999999999999999775 789


Q ss_pred             EcCCCCCcccchhhhhhhhcCCccccccccccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc-
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK-  175 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~-  175 (223)
                      |+|||++.......  ......++..|+|||.+.+ ..++.++||||+||++|+|+ +|..||...+....+..+.... 
T Consensus       164 l~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~-~g~~pf~~~~~~~~l~~i~~~~g  240 (350)
T d1q5ka_         164 LCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLG  240 (350)
T ss_dssp             ECCCTTCEECCTTS--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHH-HTSCSSCCSSHHHHHHHHHHHHC
T ss_pred             EecccchhhccCCc--ccccccccccccChHHhhcccCCCcceeecccceEEEehh-hCCCCCCCCCHHHHHHHHHHHhC
Confidence            99999987654332  2344578889999998765 46899999999999999999 7999998887666554442200 


Q ss_pred             ----------------cc----------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 ----------------LC----------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ----------------~~----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                      ..          .......++++.+|+.+||+.||++|||++|+++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         241 TPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             CCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                            00          01123467889999999999999999999999976

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.2e-36  Score=231.97  Aligned_cols=177  Identities=21%  Similarity=0.256  Sum_probs=138.0

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++++|+.++++..+.+..               ..+++..+..++.||+.||+|||+.+|+||||||+||+++.++.+|+
T Consensus        77 i~~e~~~~~~~~~~~~~~---------------~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl  141 (286)
T d1ob3a_          77 LVFEHLDQDLKKLLDVCE---------------GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI  141 (286)
T ss_dssp             EEEECCSEEHHHHHHTST---------------TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             EEEEeehhhhHHHHHhhc---------------CCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEe
Confidence            667777776666665433               35999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCccc
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC  177 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  177 (223)
                      +|||.+....... .......+++.|.+||.+.... ++.++|+||+||++|+|+ +|+.||.+.+......++......
T Consensus       142 ~DfG~a~~~~~~~-~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~-~G~~pf~~~~~~~~~~~i~~~~~~  219 (286)
T d1ob3a_         142 ADFGLARAFGIPV-RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV-NGTPLFPGVSEADQLMRIFRILGT  219 (286)
T ss_dssp             CCTTHHHHHCC----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             cccccceecccCc-cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHH-HCCCCCCCCCHHHHHHHHHHhhCC
Confidence            9999987543322 1223446788899999987554 689999999999999999 799999988776665554321000


Q ss_pred             ---------------------------CCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        178 ---------------------------WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       178 ---------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                                 .......++.+.+++.+||+.||++|||++|+++|
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         220 PNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (286)
T ss_dssp             CCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                                       01124567889999999999999999999999865

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-35  Score=231.83  Aligned_cols=173  Identities=17%  Similarity=0.233  Sum_probs=141.8

Q ss_pred             CCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeE
Q psy15108         18 SGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK   97 (223)
Q Consensus        18 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~   97 (223)
                      .+||||+ +++|..+++.                ..+++..++.++.||+.||.|||++||+||||||+||+++.++.++
T Consensus        99 ~lv~e~~-~~~l~~~~~~----------------~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~k  161 (346)
T d1cm8a_          99 YLVMPFM-GTDLGKLMKH----------------EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELK  161 (346)
T ss_dssp             EEEEECC-SEEHHHHHHH----------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred             EEEEecc-cccHHHHHHh----------------ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccc
Confidence            3678888 6778887754                3599999999999999999999999999999999999999999999


Q ss_pred             EcCCCCCcccchhhhhhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc
Q psy15108         98 ISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL  176 (223)
Q Consensus        98 l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~  176 (223)
                      ++|||++......    .....+++.|+|||.+.+. .++.++||||+||++|+|+ +|..||.+.+.......+.....
T Consensus       162 l~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell-~g~~pf~~~~~~~~~~~~~~~~~  236 (346)
T d1cm8a_         162 ILDFGLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI-TGKTLFKGSDHLDQLKEIMKVTG  236 (346)
T ss_dssp             ECCCTTCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             cccccceeccCCc----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHH-HCcCCCCCCChHHHHHHHHhccC
Confidence            9999999765432    2456788999999998764 4688999999999999999 79999988876655443322100


Q ss_pred             -----------------------------cCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 -----------------------------CWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 -----------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                                   ........++++.+|+.+||..||.+|||++|+++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         237 TPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             CCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                                         011224567889999999999999999999999987

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-35  Score=230.36  Aligned_cols=178  Identities=16%  Similarity=0.200  Sum_probs=140.5

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +++||+.++++..+....               ..+++..+..++.|+++||.|||++|++||||||+||+++.++.+++
T Consensus        94 iv~e~~~~~~~~~~~~~~---------------~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl  158 (318)
T d3blha1          94 LVFDFCEHDLAGLLSNVL---------------VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKL  158 (318)
T ss_dssp             EEEECCCEEHHHHHTCTT---------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             EEEeccCCCccchhhhcc---------------cccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEe
Confidence            678999888776554332               35899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhh---hhhhcCCcccccccccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Q psy15108         99 SLSGLSKDTYQKEY---YKYRNAILPLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK  174 (223)
Q Consensus        99 ~df~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~  174 (223)
                      +|||++........   .......+|+.|+|||.+... .++.++||||+||++|+|+ +|+.||.+.+.......+...
T Consensus       159 ~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~-~g~~pf~~~~~~~~~~~i~~~  237 (318)
T d3blha1         159 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW-TRSPIMQGNTEQHQLALISQL  237 (318)
T ss_dssp             CCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHH
T ss_pred             eecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHh-hCCCCCCCCCHHHHHHHHHHh
Confidence            99999975443221   122345689999999998755 5889999999999999999 799999988877666554432


Q ss_pred             cccC--CCC----------------------------CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        175 KLCW--KHS----------------------------SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       175 ~~~~--~~~----------------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....  ...                            ...++++++|+.+||+.||++|||++|+++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         238 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             HCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            1110  000                            0024567889999999999999999999986

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-35  Score=231.30  Aligned_cols=175  Identities=18%  Similarity=0.233  Sum_probs=141.2

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCe
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV   96 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~   96 (223)
                      ...+++|+.+|+|.++++.                ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+
T Consensus        97 ~~~i~~~~~gg~L~~~~~~----------------~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~  160 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC----------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL  160 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT----------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCE
T ss_pred             eEEEEEeecCCchhhhccc----------------ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccc
Confidence            3467899999999999953                359999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCc
Q psy15108         97 KISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK  175 (223)
Q Consensus        97 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~  175 (223)
                      +++|||++......    .....++..|+|||...+.. ++.++|+||+||++|+|+ +|..||.+.+.......+....
T Consensus       161 kl~dfg~a~~~~~~----~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll-~g~~pF~~~~~~~~~~~i~~~~  235 (348)
T d2gfsa1         161 KILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLV  235 (348)
T ss_dssp             EECCC----CCTGG----GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHHH
T ss_pred             cccccchhcccCcc----cccccccccccCchhhcCCccCCcccchhhhhHHHHHHH-hCCCCCCCCCHHHHHHHHHHhc
Confidence            99999998654332    34566788899999876654 578999999999999999 7999999888766655543321


Q ss_pred             ccCC-----------------------------CCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 LCWK-----------------------------HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 ~~~~-----------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                      ....                             .....++++++||.+||+.||++|||++|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         236 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  301 (348)
T ss_dssp             CCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence            1100                             013467889999999999999999999999985

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=2.2e-34  Score=226.30  Aligned_cols=175  Identities=14%  Similarity=0.205  Sum_probs=136.3

Q ss_pred             CCCCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCC-C
Q psy15108         17 KSGSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-S   95 (223)
Q Consensus        17 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~-~   95 (223)
                      ..+|||||.+|+|.++.                  ..+++..+..++.||+.||.|||++||+||||||+|||++.++ .
T Consensus       107 ~~~v~e~~~~~~L~~~~------------------~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~  168 (328)
T d3bqca1         107 PALVFEHVNNTDFKQLY------------------QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK  168 (328)
T ss_dssp             EEEEEECCCSCBGGGTT------------------TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTE
T ss_pred             eeEEEeecCCCcHHHHh------------------cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCe
Confidence            33689999999997764                  2599999999999999999999999999999999999999765 5


Q ss_pred             eEEcCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHh
Q psy15108         96 VKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLES  173 (223)
Q Consensus        96 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~~~~~~~-~~~~~~~~  173 (223)
                      ++++|||++.......  ......++..|+|||.+.+.. ++.++|+||+||++++++ +|..||...... .....+..
T Consensus       169 vkl~DFG~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~-~g~~pf~~~~~~~~~~~~i~~  245 (328)
T d3bqca1         169 LRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAK  245 (328)
T ss_dssp             EEECCGGGCEECCTTC--CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH-HTCSSSSCCSSHHHHHHHHHH
T ss_pred             eeecccccceeccCCC--cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhc-cCCCCCCCCchhHHHHHHHHH
Confidence            8999999997554332  234556788999999987654 789999999999999999 788888655422 11111100


Q ss_pred             -------------Cc----------------------ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        174 -------------KK----------------------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       174 -------------~~----------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                   ..                      ........+++++.+||.+||+.||++|||++|+++|
T Consensus       246 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         246 VLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             HHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                         00                      0001112357889999999999999999999999875

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-34  Score=219.88  Aligned_cols=177  Identities=18%  Similarity=0.228  Sum_probs=139.9

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      ++++++.+++|..++...+               .+++..+..++.|+++||+|||++||+||||||+||+++..+.+++
T Consensus        78 iv~~~~~~~~l~~~~~~~~---------------~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl  142 (292)
T d1unla_          78 LVFEFCDQDLKKYFDSCNG---------------DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKL  142 (292)
T ss_dssp             EEEECCSEEHHHHHHHTTT---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred             EEeeecccccccccccccc---------------ccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceee
Confidence            7789999999988887543               4899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCC-CCcccchHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHhCc-
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPF-PDLSDDQVLSQLESKK-  175 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~~l~~~~~~p~-~~~~~~~~~~~~~~~~-  175 (223)
                      +|||.+....... .......++..|.|||.+.... ++.++||||+||++|+|+ +|..|| .+.+..+....+.... 
T Consensus       143 ~DFG~a~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell-~g~~p~~~~~~~~~~~~~~~~~~~  220 (292)
T d1unla_         143 ANFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA-NAGRPLFPGNDVDDQLKRIFRLLG  220 (292)
T ss_dssp             CCCTTCEECCSCC-SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHT-TTSCCSCCCSSHHHHHHHHHHHHC
T ss_pred             eecchhhcccCCC-ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHh-hCCCCCCCCCCHHHHHHHHHhhcC
Confidence            9999997653322 1223345667889999887655 688999999999999999 677765 4555555544433210 


Q ss_pred             --------------------------ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 --------------------------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 --------------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                                .........++.+.+|+.+||+.||++|||++|+++|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         221 TPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                                      0111224557889999999999999999999999875

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-34  Score=225.80  Aligned_cols=173  Identities=14%  Similarity=0.220  Sum_probs=131.1

Q ss_pred             CCCCCCCCCChHHHHHHhhhccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEE
Q psy15108         19 GSGKPRVKGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI   98 (223)
Q Consensus        19 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l   98 (223)
                      +|||||.++.+. .+.                 ..+++..++.++.|++.||.|||++|++||||||.||+++.++.+++
T Consensus        99 iv~Ey~~~~l~~-~~~-----------------~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl  160 (355)
T d2b1pa1          99 LVMELMDANLCQ-VIQ-----------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI  160 (355)
T ss_dssp             EEEECCSEEHHH-HHT-----------------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred             EEEeccchHHHH-hhh-----------------cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceee
Confidence            789999766554 442                 25899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccchhhhhhhhcCCcccccccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCcc--
Q psy15108         99 SLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL--  176 (223)
Q Consensus        99 ~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~~~~~~~~~~~--  176 (223)
                      +|||++.......  ......+|..|+|||.+.+..++.++|+||+||++++|+ +|+.||.+.+......++.....  
T Consensus       161 ~df~~~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell-~g~~pF~~~~~~~~~~~i~~~~~~~  237 (355)
T d2b1pa1         161 LDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP  237 (355)
T ss_dssp             CCCCC-----------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             echhhhhcccccc--ccccccccccccChhhhcCCCCCCCcccccccchHHHHh-hCCCCCCCCCHHHHHHHHHHhccCC
Confidence            9999887554332  234456788999999999999999999999999999999 79999988776655444322100  


Q ss_pred             --------------------cCC------------CC------CCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        177 --------------------CWK------------HS------SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       177 --------------------~~~------------~~------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                          ...            .+      ...++++.+|+.+||..||++|||++|+++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             CHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                                000            00      1124678899999999999999999999976

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=9.6e-30  Score=202.17  Aligned_cols=156  Identities=22%  Similarity=0.343  Sum_probs=119.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhc-CCcccCCCCCCCeeeecCCC------eEEcCCCCCcccchhhhhhhhcCCccccc
Q psy15108         52 RSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS------VKISLSGLSKDTYQKEYYKYRNAILPLRW  124 (223)
Q Consensus        52 ~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~~~nil~~~~~~------~~l~df~~~~~~~~~~~~~~~~~~~~~~~  124 (223)
                      ..+++..+..++.||++|+.|||+ .||+||||||+|||++..+.      ++++|||.+......    .....+++.|
T Consensus       120 ~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~----~~~~~gt~~y  195 (362)
T d1q8ya_         120 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH----YTNSIQTREY  195 (362)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGG
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccc----cccccccccc
Confidence            578999999999999999999997 89999999999999986643      899999998654322    2456788999


Q ss_pred             ccccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHh------------Cc-----------
Q psy15108        125 LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ------VLSQLES------------KK-----------  175 (223)
Q Consensus       125 ~~pe~~~~~~~~~~~Di~slG~il~~l~~~~~~p~~~~~~~~------~~~~~~~------------~~-----------  175 (223)
                      +|||.+....++.++|+||+||++++|+ +|+.||...+...      .......            ..           
T Consensus       196 ~aPE~~~~~~~~~~~DiwSlG~il~el~-~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  274 (362)
T d1q8ya_         196 RSPEVLLGAPWGCGADIWSTACLIFELI-TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGL  274 (362)
T ss_dssp             CCHHHHHTCCCCTHHHHHHHHHHHHHHH-HSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--C
T ss_pred             cChhhccccCCCccccccchHHHHHHHH-HCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchh
Confidence            9999999899999999999999999999 7999997543211      1110000            00           


Q ss_pred             -----------------ccCCCCCCChHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy15108        176 -----------------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQ  212 (223)
Q Consensus       176 -----------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  212 (223)
                                       .........++++.+|+.+||..||.+|||++|+++|
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         275 LRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             BSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             hhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                             0001112235778999999999999999999999986

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.40  E-value=1.6e-14  Score=103.62  Aligned_cols=88  Identities=11%  Similarity=0.147  Sum_probs=60.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCCeeeecCCCeEEcCCCCCcccchhhhhhhhcCCcccccccccccccC
Q psy15108         54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDD  133 (223)
Q Consensus        54 l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  133 (223)
                      ++...+..++.|+++++.|||+.|++||||||.||+++.. .++++|||.+...........-..-.+  .+ . ....+
T Consensus       100 l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~liDFG~a~~~~~~~~~~~l~rd~~--~~-~-~~f~r  174 (191)
T d1zara2         100 VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEVGEEGWREILERDVR--NI-I-TYFSR  174 (191)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEECCCTTCEETTSTTHHHHHHHHHH--HH-H-HHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-CEEEEECCCcccCCCCCcHHHHHHHHH--HH-H-HHHcC
Confidence            4556677899999999999999999999999999999865 588999999876542221110000000  00 0 11235


Q ss_pred             CCCcccchHHHHH
Q psy15108        134 EFSTKSDVYAYAC  146 (223)
Q Consensus       134 ~~~~~~Di~slG~  146 (223)
                      .|+.++|+||+.-
T Consensus       175 ~y~~~~d~~s~~~  187 (191)
T d1zara2         175 TYRTEKDINSAID  187 (191)
T ss_dssp             HHCCCCCHHHHHH
T ss_pred             CCCCcccHHHHHH
Confidence            6788899999653

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.13  E-value=0.022  Score=42.17  Aligned_cols=44  Identities=14%  Similarity=-0.045  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHhhc----CCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         63 AYQVALGLEHISD----KRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        63 ~~~i~~~l~~LH~----~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      +..+...+.....    .|++|+|+.+.|++++.+...-++||+.+..
T Consensus       166 l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         166 IRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             HHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence            3344444444433    4799999999999999887778999998753

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.51  E-value=0.03  Score=40.00  Aligned_cols=30  Identities=17%  Similarity=0.138  Sum_probs=25.4

Q ss_pred             CcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         77 RLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        77 ~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      .++|+|+.+.||+++.++.+-++||+.+..
T Consensus       184 ~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEEEeeccCcceeecCCceEEEeechhccc
Confidence            478999999999999766667999998753

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=91.54  E-value=0.034  Score=39.47  Aligned_cols=29  Identities=14%  Similarity=0.067  Sum_probs=25.1

Q ss_pred             CcccCCCCCCCeeeecCCCeEEcCCCCCc
Q psy15108         77 RLIHKDIAARNCLISSDLSVKISLSGLSK  105 (223)
Q Consensus        77 ~i~H~di~~~nil~~~~~~~~l~df~~~~  105 (223)
                      .++|+|+.+.||+++.+..+-++||+.+.
T Consensus       176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             eEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            47999999999999987667799999775

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=90.75  E-value=0.15  Score=38.90  Aligned_cols=30  Identities=20%  Similarity=0.238  Sum_probs=26.0

Q ss_pred             CCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         76 KRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        76 ~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      ..++|+|+.+.|||++.+ .++++|+..+..
T Consensus       223 ~~LiHGDl~~gNIlv~~~-~~~vID~E~a~~  252 (392)
T d2pula1         223 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFY  252 (392)
T ss_dssp             CEEECSCCCGGGEEECSS-CEEECCCTTCEE
T ss_pred             cceeccCCcCCceeEcCC-ceEEechhhccc
Confidence            479999999999999876 589999998864

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=89.14  E-value=0.24  Score=36.52  Aligned_cols=46  Identities=11%  Similarity=-0.012  Sum_probs=31.0

Q ss_pred             HHHHHHHHHHHHHHhh----cCCcccCCCCCCCeeeecCCCeEEcCCCCCcc
Q psy15108         59 AVTMAYQVALGLEHIS----DKRLIHKDIAARNCLISSDLSVKISLSGLSKD  106 (223)
Q Consensus        59 ~~~i~~~i~~~l~~LH----~~~i~H~di~~~nil~~~~~~~~l~df~~~~~  106 (223)
                      ....+.++...+.-.-    ..+++|+|+.+.||+++.+  ..++||+-+..
T Consensus       171 ~~~~~~~l~~~l~~~~~~~~p~~liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         171 FLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             HHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             HHHHHHHHHHHHHHhccccCCceeecCCCCcccEEEeCC--ceEEechhccc
Confidence            3444455555544332    2368999999999999743  45899998763