Diaphorina citri psyllid: psy15273


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320----
MKNNVTLRGTFVNKLSYKLISFHIGVNCSPVPSKVDSFTGAQQVVCGQNCTFVLQVNGSVLSCGEGSYGRLGQGHSDDLHTPSIISALLGFIIIKVATSCGSDGHSLGLAESGEVFSWGDGDFGKLGHGNSDRQRRPRQIEALQGQHAVDVHYRLHEMDTAVACIREGMARIIPVPLLSLMTSSHLEQLVCGEPHISLSLLKQIVRYRDLDENHILVRWMWEVLDSFSHNERVLFMRFVSGRSRLPANLADLSQRFQVMKVDRCIDGLPTAQTCFFQLRLPNYSSKEVMAEKLRYAINNCKSIDMDNYMLARNNEFASTDDETY
ccccCEEccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEccEEEEECccccccccccccccccccEEEEccccEEEEEEEEcccccccEEEEEEEEEEEEECcccCEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHccccHHHHHHHHHccccccHHHHHHcccccccccccHHHHHHHHHHHcccHHHHHHcccEEcccccccccccccccccEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHccccccccccccc
**NNVTLRGTFVNKLSYKLISFHIGVNCSPVPSKVDSFTGAQQVVCGQNCTFVLQVNGSVLSCGEGSYGRLGQGHSDDLHTPSIISALLGFIIIKVATSCGSDGHSLGLAESGEVFSWGDGDFGKLGHGNSDRQRRPRQIEALQGQHAVDVHYRLHEMDTAVACIREGMARIIPVPLLSLMTSSHLEQLVCGEPHISLSLLKQIVRYRDLDENHILVRWMWEVLDSFSHNERVLFMRFVSGRSRLPANLADLSQRFQVMKVDRCIDGLPTAQTCFFQLRLPNYSSKEVMAEKLRYAINNCKSIDMDNYMLA*************
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MKNNVTLRGTFVNKLSYKLISFHIGVNCSPVPSKVDSFTGAQQVVCGQNCTFVLQVNGSVLSCGEGSYGRLGQGHSDDLHTPSIISALLGFIIIKVATSCGSDGHSLGLAESGEVFSWGDGDFGKLGHGNSDRQRRPRQIEALQGQHAVDVHYRLHEMDTAVACIREGMARIIPVPLLSLMTSSHLEQLVCGEPHISLSLLKQIVRYRDLDENHILVRWMWEVLDSFSHNERVLFMRFVSGRSRLPANLADLSQRFQVMKVDRCIDGLPTAQTCFFQLRLPNYSSKEVMAEKLRYAINNCKSIDMDNYMLARNNEFASTDDETY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable E3 ubiquitin-protein ligase HERC1 Involved in membrane trafficking via some guanine nucleotide exchange factor (GEF) activity and its ability to bind clathrin. Acts as a GEF for Arf and Rab, by exchanging bound GDP for free GTP. Binds phosphatidylinositol 4,5-bisphosphate, which is required for GEF activity. May also act as a E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.confidentQ15751

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006281 [BP]DNA repairprobableGO:0090304, GO:0034641, GO:0006807, GO:0044699, GO:0006139, GO:0051716, GO:0044260, GO:0071704, GO:1901360, GO:0009987, GO:0006725, GO:0006974, GO:0006950, GO:0044763, GO:0008152, GO:0046483, GO:0044238, GO:0050896, GO:0044237, GO:0043170, GO:0033554, GO:0006259, GO:0008150
GO:0004842 [MF]ubiquitin-protein ligase activityprobableGO:0019787, GO:0016879, GO:0016881, GO:0003824, GO:0003674, GO:0016874
GO:0006511 [BP]ubiquitin-dependent protein catabolic processprobableGO:0051603, GO:1901575, GO:0044265, GO:0044260, GO:0044267, GO:0019538, GO:0009056, GO:0009987, GO:0019941, GO:0044237, GO:0043170, GO:0044248, GO:0071704, GO:0008150, GO:0030163, GO:0008152, GO:0044257, GO:0006508, GO:0043632, GO:0044238, GO:0009057
GO:0071944 [CC]cell peripheryprobableGO:0005575, GO:0044464, GO:0005623
GO:0000209 [BP]protein polyubiquitinationprobableGO:0071704, GO:0044267, GO:0044238, GO:0044260, GO:0032446, GO:0019538, GO:0009987, GO:0070647, GO:0006464, GO:0043170, GO:0016567, GO:0043412, GO:0036211, GO:0008150, GO:0044237, GO:0008152
GO:0031625 [MF]ubiquitin protein ligase bindingprobableGO:0003674, GO:0044389, GO:0005515, GO:0019899, GO:0005488
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0005743 [CC]mitochondrial inner membraneprobableGO:0019866, GO:0031975, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0031090, GO:0016020, GO:0005740, GO:0005739, GO:0031967, GO:0031966, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0032183 [MF]SUMO bindingprobableGO:0003674, GO:0032182, GO:0005488, GO:0005515

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4D9S, chain A
Confidence level:very confident
Coverage over the Query: 10-208
View the alignment between query and template
View the model in PyMOL
Template: 1ZVD, chain A
Confidence level:very confident
Coverage over the Query: 139-299
View the alignment between query and template
View the model in PyMOL