Diaphorina citri psyllid: psy15484

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230---
MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHKMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDSTKRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLAILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKKYLMLFDPNCSENSYFIVPTVSDSEQIVIDWKFMTLISEHHNDVIQDIPEKERENFVFDESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLKYGLQIQNLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVPELCLIHPFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEIGLGKVILDEKVEWPPFNFGWKMKKLKEKYGWDTKDANDVIVDDTEVNDTKEDDSAVNEICTEIAKVEIVDKKETVCDSGNEQENEDEEKLDKIKSDENKTESQGVEPWVEIGTWSNEMAAGVECKPYPMTPPMFSDDEDSNDDLSSVDFDVEDDFRENEKEDTLQIQFKGKYSAEAICEGEEESALKIQDWIESNFFWEEIDVNHINSKAEFVKVIQDKLTFYEGQLELIKNRIDVENTIKENQPVHIVRQSFDNASNPSKNTAILTEILENINKLNTYGSVEKDVKTEPKSPGKSCEHGIIRNTSTPSDFSFDFQPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKVIPPVTNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYKGIGRNYCIAKCTAAKCALKHLKSAKPADVK
cccHHHHHHHHHccccccccccccCEEEEEEECccccEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccEEEEEEEEEEccccccccccccccccccccccccEEEEEcccccccccccEEEcccEEEEEEEEEcccEEccHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEcccccccccHHHHHHHHHHHcccccccccHHHccccccccccccccEEEccccccccccEEEEEEEcccccccccccccccccccHHHHHHHHcccccccccccCEEECccccccccccccccccccccccccHHHHHHHHHHcccccEECcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccHHHHccccHHHHHHHHHHccccccccccHHHHHcHHHHHHHHccccccccccHHHHHHHccccccccccccccCEEcccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccEEECcccccHHHHHHHHHccEEHHcccHHHHHHHHHcccccccccccccccccHHHHcccHHHHHHcccEEEccHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccHHHHHHHHHHccHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccccCEECcCEEcccccEEEEEEEEccCEEEEEECccHHHHHHHHHHHHHHHHHcccccccc
*DNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHKMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVP*************RRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLAILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKKYLMLFDPNCSENSYFIVPTVSDSEQIVIDWKFMTLISEHHNDVIQDIPEKERENFVFDESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLKYGLQIQNLEQPLLDVDHTSCRLNFLTPRYVN********************LGKKQLLVPELCLIHPFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEIGLGKVILDEKVEWPPFNFGWKMKKLK*******************************************D************************************PWVEIGTWSNEMAAGVECKPYPMTPPMFSDDED*************************QIQFKGKYSAEAICEGEEESALKIQDWIESNFFWEEIDVNHINSKAEFVKVIQDKLTFYEGQLELIKNRIDVENTIKENQPVHIVR****NASNPSKNTAILTEILENINKLNTYGSVE************SCEHGIIRNTSTPSDFSFDFQPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKVIPPVTNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYKGIGRNYCIAKCTAAKCALKHL**A******
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MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHKMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDSTKRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLAILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKKYLMLFDPNCSENSYFIVPTVSDSEQIVIDWKFMTLISEHHNDVIQDIPEKERENFVFDESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLKYGLQIQNLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVPELCLIHPFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEIGLGKVILDEKVEWPPFNFGWKMKKLKEKYGWDTKDANDVIVDDTEVNDTKEDDSAVNEICTEIAKVEIVDKKETVCDSGNEQENEDEEKLDKIKSDENKTESQGVEPWVEIGTWSNEMAAGVECKPYPMTPPMFSDDEDSNDDLSSVDFDVEDDFRENEKEDTLQIQFKGKYSAEAICEGEEESALKIQDWIESNFFWEEIDVNHINSKAEFVKVIQDKLTFYEGQLELIKNRIDVENTIKENQPVHIVRQSFDNASNPSKNTAILTEILENINKLNTYGSVEKDVKTEPKSPGKSCEHGIIRNTSTPSDFSFDFQPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKVIPPVTNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYKGIGRNYCIAKCTAAKCALKHLKSAKPADVK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016442 [CC]RNA-induced silencing complexprobableGO:0032991, GO:0031332, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0030529
GO:0004525 [MF]ribonuclease III activityprobableGO:0016787, GO:0003824, GO:0004518, GO:0004519, GO:0004540, GO:0004521, GO:0016788, GO:0016893, GO:0016891, GO:0003674
GO:0030422 [BP]production of siRNA involved in RNA interferenceprobableGO:0009892, GO:0019222, GO:0090304, GO:0031050, GO:0010629, GO:0006807, GO:0070887, GO:0050789, GO:0044699, GO:0070918, GO:0006139, GO:0051716, GO:0010605, GO:0044260, GO:0071359, GO:0010608, GO:1901360, GO:0040029, GO:0071704, GO:0010467, GO:0065007, GO:0014070, GO:0016246, GO:0010468, GO:0060255, GO:0009987, GO:0006725, GO:0071310, GO:0044763, GO:0031047, GO:0008152, GO:0048519, GO:0042221, GO:0010033, GO:0046483, GO:0016070, GO:0044238, GO:0016458, GO:0035194, GO:0071407, GO:1901698, GO:1901699, GO:0034641, GO:0044237, GO:0043170, GO:0043331, GO:0016441, GO:0008150, GO:0050896, GO:0006396
GO:0030426 [CC]growth coneprobableGO:0030427, GO:0044463, GO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995
GO:0030425 [CC]dendriteprobableGO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995
GO:0030424 [CC]axonprobableGO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995
GO:0005793 [CC]endoplasmic reticulum-Golgi intermediate compartmentprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0003723 [MF]RNA bindingprobableGO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3C4B, chain A
Confidence level:very confident
Coverage over the Query: 973-1094,1111-1211
View the alignment between query and template
View the model in PyMOL
Template: 2QVW, chain A
Confidence level:very confident
Coverage over the Query: 176-384,398-448,466-474,565,624-637,675-710,744-745,765-1076,1105-1154
View the alignment between query and template
View the model in PyMOL
Template: 3C4B, chain A
Confidence level:very confident
Coverage over the Query: 726-752,776-839
View the alignment between query and template
View the model in PyMOL
Template: 2KOU, chain A
Confidence level:very confident
Coverage over the Query: 1-96
View the alignment between query and template
View the model in PyMOL