Diaphorina citri psyllid: psy1550

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260----

MKISGEKPNPCTNGLIEMLLEVSQDAVKGGTWLATSTNGKLGILLNVLGENSRPNGRDRGPLVVKYVEGQKSAEEYLTDLKKETEENVFNGFHIVLLELTLQSTNIYHFSNIAPLDSPSTKVTNVTNKQENKDHVYGFGNSQCTSQPFQKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKAEADMDEDYKMRYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWTLDYETKKWIHTHIRKTLNMA

ccccccccccccccccccccccccccccccEEEEEcccccEEEEEcccccccccccccccHHHHHHHcccccHHHHHHHHHHHccccccccEEEEEEcccccccEEEEEcccccccccccccccccccccccccEEEEccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccHHHHHcccccHHHHHHHccEEEEcccccccccCEEEEEEECccCEEEEEEEEEcccccEEEEEEEEEEEcc

*******PNPCTNGLIEMLLEVSQDAVKGGTWLATSTNGKLGILLNVLGE*********GPLVVKYVEGQKSAEEYLTDLKKETEENVFNGFHIVLLELTLQSTNIYHFSNIAPLDSPSTKVTNVTNKQENKDHVYGFGNSQCTSQPFQKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKAEADMDEDYKMRYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWTLDYETKKWIHTHIRKTLNM*

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Ser/Thr-rich protein T10 in DGCR region		confident	P54797
Transport and Golgi organization 2	May play a role in Golgi organization.	confident	Q9VYA8

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0005794 [CC]	Golgi apparatus	probable	GO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005829 [CC]	cytosol	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3GVZ, chain A
Confidence level:probable
Coverage over the Query: 30-186
View the alignment between query and template
View the model in PyMOL