Psyllid ID: psy1550


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260----
MKISGEKPNPCTNGLIEMLLEVSQDAVKGGTWLATSTNGKLGILLNVLGENSRPNGRDRGPLVVKYVEGQKSAEEYLTDLKKETEENVFNGFHIVLLELTLQSTNIYHFSNIAPLDSPSTKVTNVTNKQENKDHVYGFGNSQCTSQPFQKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKAEADMDEDYKMRYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWTLDYETKKWIHTHIRKTLNMA
ccccccccccccccccccccccccccccccEEEEEcccccEEEEEcccccccccccccccHHHHHHHcccccHHHHHHHHHHHccccccccEEEEEEcccccccEEEEEcccccccccccccccccccccccccEEEEccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccHHHHHHHccccHHHHHHHccEEEEcccccccccEEEEEEEEEccEEEEEEEEEEcccccEEEEEEEEEEEcc
ccccccccccccccccHHHccccccHccccEEEEEccccEEEEEEEcccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHccccccEEEEEEEccccccEEEEEEcccccccEEEEEcccccccEccccEEEEcccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccccccccccccccccHHHHHHHccEEEEccccccccccEEEEEEEccccEEEEEEEEcccccccEEEEEEEEEEcc
mkisgekpnpctnGLIEMLLEVSQDAvkggtwlatstngkLGILLNVlgensrpngrdrgpLVVKYVEGQKSAEEYLTDLKKETEENVFNGFHIVLLELTLqstniyhfsniapldspstkvtnvtnkqenkdhvygfgnsqctsqpfqkviFGKEKFAEIVNKFNRKSESQNLIQNILDLMKnkqsnypdpeidrkaeadmdedykMRYSRVCVDISsifygtrtHSIIlvdhnnvmdfHEWTLDYETKKWIHTHIRKTLNMA
mkisgekpnpcTNGLIEMLLEVSQDAVKGGTWLATSTNGKLGILLNVlgensrpngrdrgpLVVKYVEGQKSAEEYLTDLKKETEENVFNGFHIVLLELTLQSTNIYHFSniapldspstKVTNVTNKQENKDHVYGFGNSQCTSQPFQKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMknkqsnypdpeidrkaeadmdedYKMRYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWTLDYETKKWIHTHIRKTLNMA
MKISGEKPNPCTNGLIEMLLEVSQDAVKGGTWLATSTNGKLGILLNVLGENSRPNGRDRGPLVVKYVEGQKSAEEYLTDLKKETEENVFNGFHIVLLELTLQSTNIYHFSNIAPLDSPSTKVTNVTNKQENKDHVYGFGNSQCTSQPFQKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKAEADMDEDYKMRYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWTLDYETKKWIHTHIRKTLNMA
***********TNGLIEMLLEVSQDAVKGGTWLATSTNGKLGILLNVLG************LVVKYVEG****EEYLTDLKKETEENVFNGFHIVLLELTLQSTNIYHFSNIAPL******************HVYGFGNSQCTSQPFQKVIFGKEKFAEIVNKFN*******LIQNIL**************************YKMRYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWTLDYETKKWIHTHIRK*****
****GEKPNPCTNGLIEMLLEVSQDAVKGGTWLATSTNGKLGILLNVLGE*********GPLVVKYVEGQKSAEEYLTDLKKETEENVFNGFHIVLLELTLQSTNIYHFSNIAPLDSPSTKVTNVTNKQENKDHVYGFGNSQCTSQPFQKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKAEADMDEDYKMRYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWTLDYETKKWIHTHIRKTLNM*
********NPCTNGLIEMLLEVSQDAVKGGTWLATSTNGKLGILLNVLGENSRPNGRDRGPLVVKYVEGQKSAEEYLTDLKKETEENVFNGFHIVLLELTLQSTNIYHFSNIAPLDSPSTKVTNVTNKQENKDHVYGFGNSQCTSQPFQKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKAEADMDEDYKMRYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWTLDYETKKWIHTHIRKTLNMA
*******PNPCTNGLIEMLLEVSQDAVKGGTWLATSTNGKLGILLNVLGENSRPNGRDRGPLVVKYVEGQKSAEEYLTDLKKETEENVFNGFHIVLLELTLQSTNIYHFSNIAPLDSPSTKVTNVTNKQENKDHVYGFGNSQCTSQPFQKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKAEADMDEDYKMRYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWTLDYETKKWIHTHIRKTLNMA
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKISGEKPNPCTNGLIEMLLEVSQDAVKGGTWLATSTNGKLGILLNVLGENSRPNGRDRGPLVVKYVEGQKSAEEYLTDLKKETEENVFNGFHIVLLELTLQSTNIYHFSNIAPLDSPSTKVTNVTNKQENKDHVYGFGNSQCTSQPFQKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKAEADMDEDYKMRYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWTLDYETKKWIHTHIRKTLNMA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query264 2.2.26 [Sep-21-2011]
P54797276 Ser/Thr-rich protein T10 yes N/A 0.768 0.735 0.313 2e-21
Q29RZ5276 Transport and Golgi organ yes N/A 0.784 0.75 0.280 4e-19
Q6ICL3276 Transport and Golgi organ yes N/A 0.784 0.75 0.297 2e-18
Q9VYA8283 Transport and Golgi organ yes N/A 0.803 0.749 0.318 1e-17
>sp|P54797|T10_MOUSE Ser/Thr-rich protein T10 in DGCR region OS=Mus musculus GN=T10 PE=2 SV=1 Back     alignment and function desciption
 Score =  103 bits (256), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 119/239 (49%), Gaps = 36/239 (15%)

Query: 24  QDAVKGGTWLATSTNGKLGILLNVLGENSRPNGRDRGPLVVKYVEGQKSAEEYLTDLKKE 83
           ++   GGTWL  ST GKLG L N L     P+ R RG LV  ++     +  YL   K  
Sbjct: 53  EEGKAGGTWLGISTRGKLGALTNYLQPRQEPDARGRGELVSHFLTSDMDSLSYLK--KVS 110

Query: 84  TEENVFNGFHIVLLELTLQSTNIYHFSNIAPLDSPSTKVTNVTNKQENKDHV-----YGF 138
           TE +++NGF+I+  +L+    ++               V    N+ E +  V     YG 
Sbjct: 111 TEGHLYNGFNIIAADLSTSKGDV---------------VCYYGNRGEPEPIVLTPGTYGL 155

Query: 139 GNSQCTSQPFQKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKA 198
            N+   + P++K+ FGK+ F E V + +       L+  +LD++ N+++  PDP I+   
Sbjct: 156 SNALLET-PWKKLCFGKQLFMEAVEQ-SEALPKDVLVTQLLDVLNNEEAQLPDPAIE--- 210

Query: 199 EADMDEDYKM----RYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWT-LDYETKKW 252
             D  ++Y      +Y+ V    +S  YGTRT++IILVD N  + F E + LD +T +W
Sbjct: 211 --DQGQEYVQPILNKYAAVWCRCAS--YGTRTNTIILVDANGHVTFTERSMLDKDTSRW 265





Mus musculus (taxid: 10090)
>sp|Q29RZ5|TNG2_BOVIN Transport and Golgi organization 2 homolog OS=Bos taurus GN=TANGO2 PE=2 SV=1 Back     alignment and function description
>sp|Q6ICL3|TNG2_HUMAN Transport and Golgi organization 2 homolog OS=Homo sapiens GN=TANGO2 PE=2 SV=1 Back     alignment and function description
>sp|Q9VYA8|TNG2_DROME Transport and Golgi organization 2 OS=Drosophila melanogaster GN=Tango2 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query264
242009326280 Ser/Thr-rich protein T10 in DGCR region, 0.803 0.757 0.381 3e-30
328723712273 PREDICTED: uncharacterized protein C22or 0.765 0.739 0.350 4e-29
158290321293 AGAP002962-PA [Anopheles gambiae str. PE 0.848 0.764 0.331 1e-23
195448871277 GK10209 [Drosophila willistoni] gi|19416 0.806 0.768 0.353 5e-22
255918143276 ser/Thr-rich protein T10 in DGCR region 0.768 0.735 0.317 2e-21
91084657271 PREDICTED: similar to AGAP002962-PA [Tri 0.734 0.715 0.357 4e-21
350416464274 PREDICTED: uncharacterized protein C22or 0.727 0.700 0.362 5e-21
354480611276 PREDICTED: ser/Thr-rich protein T10 in D 0.784 0.75 0.306 1e-20
383852607271 PREDICTED: uncharacterized protein C22or 0.727 0.708 0.353 2e-20
324523220288 Ser/Thr-rich protein T10 in DGCR region 0.803 0.736 0.298 2e-20
>gi|242009326|ref|XP_002425440.1| Ser/Thr-rich protein T10 in DGCR region, putative [Pediculus humanus corporis] gi|212509266|gb|EEB12702.1| Ser/Thr-rich protein T10 in DGCR region, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 130/233 (55%), Gaps = 21/233 (9%)

Query: 29  GGTWLATSTNGKLGILLNVLGENSRPNGRDRGPLVVKYVEGQKSAEEYLTDLKKETEENV 88
           GGTWLA S  GK+G+LLNV  + S P+   RG LV   ++   + +EY+  LK E E  +
Sbjct: 57  GGTWLAVSKKGKIGVLLNV-SQKSNPDKLGRGFLVANLLKTPLTTKEYMEILKIEKE--L 113

Query: 89  FNGFHIVLLELTLQSTNIYHFSNIAPLDSPSTKVTNVTNKQENKDHVYGFGNSQCTSQPF 148
           +N +H+V  E + Q  N+ H+SN    ++  T++ +          V+   NS   S PF
Sbjct: 114 YNTYHLVSAEFSPQG-NLLHYSNGKSNENVITEIDS---------EVFALSNSSMDS-PF 162

Query: 149 QKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKAEADMDEDYKM 208
           QKVI GK+ F +I +K+    +   LI  +L  +K  + +YPD  ID  + + + E  K 
Sbjct: 163 QKVIKGKQIFNDICSKYKTIKDKDKLISELLTFLKWDEKHYPDTVID--SFSHIPEKIKP 220

Query: 209 RYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWTLDYET-----KKWIHTH 256
            YS + V I + +YGTRTH+IILVD  N ++FHEWTL+         KWI TH
Sbjct: 221 NYSAIFVKIPTSYYGTRTHTIILVDWENKVEFHEWTLEEPILSQNDSKWIETH 273




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723712|ref|XP_001943801.2| PREDICTED: uncharacterized protein C22orf25 homolog [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|158290321|ref|XP_311935.4| AGAP002962-PA [Anopheles gambiae str. PEST] gi|157017837|gb|EAA07544.4| AGAP002962-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|195448871|ref|XP_002071850.1| GK10209 [Drosophila willistoni] gi|194167935|gb|EDW82836.1| GK10209 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|255918143|ref|NP_613049.2| ser/Thr-rich protein T10 in DGCR region [Mus musculus] gi|26354360|dbj|BAC40808.1| unnamed protein product [Mus musculus] gi|74219739|dbj|BAE40462.1| unnamed protein product [Mus musculus] gi|74227275|dbj|BAE21736.1| unnamed protein product [Mus musculus] gi|148665102|gb|EDK97518.1| DNA segment, Chr 16, human D22S680E, expressed, isoform CRA_c [Mus musculus] Back     alignment and taxonomy information
>gi|91084657|ref|XP_967518.1| PREDICTED: similar to AGAP002962-PA [Tribolium castaneum] gi|270008630|gb|EFA05078.1| hypothetical protein TcasGA2_TC015175 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|350416464|ref|XP_003490957.1| PREDICTED: uncharacterized protein C22orf25-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|354480611|ref|XP_003502498.1| PREDICTED: ser/Thr-rich protein T10 in DGCR region-like [Cricetulus griseus] gi|344241494|gb|EGV97597.1| Ser/Thr-rich protein T10 in DGCR region [Cricetulus griseus] Back     alignment and taxonomy information
>gi|383852607|ref|XP_003701818.1| PREDICTED: uncharacterized protein C22orf25-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|324523220|gb|ADY48210.1| Ser/Thr-rich protein T10 in DGCR region [Ascaris suum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query264
FB|FBgn0030503283 Tango2 "Transport and Golgi or 0.803 0.749 0.330 1.4e-18
RGD|1310348276 Tango2 "transport and golgi or 0.803 0.768 0.273 1.4e-18
UNIPROTKB|F1RHN1276 C22orf25 "Uncharacterized prot 0.738 0.706 0.271 7.5e-18
MGI|MGI:101825276 Tango2 "transport and golgi or 0.803 0.768 0.273 7.5e-18
UNIPROTKB|Q5ZI44276 C15H22orf25 "Uncharacterized p 0.803 0.768 0.239 1.1e-16
WB|WBGene00011305276 R186.1 [Caenorhabditis elegans 0.825 0.789 0.257 7.7e-16
UNIPROTKB|Q6ICL3276 TANGO2 "Transport and Golgi or 0.803 0.768 0.273 1.3e-15
UNIPROTKB|E2RCR6352 C22orf25 "Uncharacterized prot 0.818 0.613 0.259 1.9e-15
UNIPROTKB|C9J695226 TANGO2 "Transport and Golgi or 0.594 0.694 0.306 3.8e-14
ZFIN|ZDB-GENE-040808-42273 tango2 "transport and golgi or 0.481 0.465 0.276 2.7e-08
FB|FBgn0030503 Tango2 "Transport and Golgi organization 2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 80/242 (33%), Positives = 117/242 (48%)

Query:    28 KGGTWLATSTNG---KLGILLNVLGENSRPNGRDRGPLVVKYVEGQKSAEEYLTDLKKET 84
             +GGTWLA   +    K+G LLN+ GE    +   RG +V  YV     A+E         
Sbjct:    56 EGGTWLAIGHSAGFFKVGALLNLTGEPKPRDAVGRGMIVADYVT---RADE--------- 103

Query:    85 EENVFNGFHIVLLELTLQSTNIYHFSNIAPLDSPS-TKV-TNVTNKQEN--KDHVYGFGN 140
             E ++ N    +L + T  S   +    I     P+  K+ +NV    E+      YGFGN
Sbjct:   104 EHSILNYNERLLKDCTKYSAFNFVSIEIGSASQPARVKLLSNVPPTLEDFQNGECYGFGN 163

Query:   141 SQCTSQPFQKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKAEA 200
             S   S PF+KV  GK++F  IV K + ++  + L   ++ L++NK   +PD E+  +A  
Sbjct:   164 SLPHS-PFEKVRHGKQEFEAIV-KAHGEASVETLSAQLMQLLRNKHKFWPDDELKTRAP- 220

Query:   201 DMDEDYKMRYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWT---LDYETKKWIHTHI 257
                 ++    S + V I    YG+RTHS++LVD  N M F E T   LD   + W  THI
Sbjct:   221 ----NWGEGLSSLNVHIEEHAYGSRTHSVVLVDSENKMHFIEETMTGLDPHGE-WNKTHI 275

Query:   258 RK 259
              K
Sbjct:   276 EK 277




GO:0003674 "molecular_function" evidence=ND
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0007030 "Golgi organization" evidence=IMP
GO:0009306 "protein secretion" evidence=IMP
RGD|1310348 Tango2 "transport and golgi organization 2 homolog (Drosophila)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RHN1 C22orf25 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:101825 Tango2 "transport and golgi organization 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZI44 C15H22orf25 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
WB|WBGene00011305 R186.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q6ICL3 TANGO2 "Transport and Golgi organization 2 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RCR6 C22orf25 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|C9J695 TANGO2 "Transport and Golgi organization 2 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040808-42 tango2 "transport and golgi organization 2 homolog (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P54797T10_MOUSENo assigned EC number0.31380.76890.7355yesN/A
Q9VYA8TNG2_DROMENo assigned EC number0.31810.80300.7491yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query264
pfam05742267 pfam05742, NRDE, NRDE protein 2e-42
COG3332270 COG3332, COG3332, Uncharacterized conserved protei 6e-13
>gnl|CDD|218726 pfam05742, NRDE, NRDE protein Back     alignment and domain information
 Score =  145 bits (367), Expect = 2e-42
 Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 20/233 (8%)

Query: 29  GGTWLATSTNGKLGILLNVLGENSRPNGRDRGPLVVKYVEGQKSAEEYLTDLKKETEENV 88
           GGTWL  + +GK+  L NV     RPN R RG LV  ++    SA EYL +LKK   E  
Sbjct: 53  GGTWLGITKDGKVAALTNVRQPLERPNARSRGELVADFLTSNASALEYLENLKKRAHE-- 110

Query: 89  FNGFHIVLLEL-TLQSTNIYHFSNIAPLDSPSTKVTNVTNKQENKDHVYGFGNSQCTSQP 147
           +NGF++V  +     S  +Y+ SN      P         + +    +YG  NS   + P
Sbjct: 111 YNGFNLVAADKNKTGSDRVYYLSNRPE-KLP---------RIQLAPGIYGLSNSLLDT-P 159

Query: 148 FQKVIFGKEKFAEIVNKFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKAEADMDEDYK 207
           + KV  G++   E + + + +   + +IQ +L+++ N  +  PD ++          + +
Sbjct: 160 WPKVRVGRKLLEERL-EASDELSVETIIQQLLEILANTSAFAPDAQL--PDTGVFVPETE 216

Query: 208 MRYSRVCVDISSIFYGTRTHSIILVDHNNVMDFHEWTL-DYETKKWIHTHIRK 259
              S + +      YGTR  +++LVDH+  + F E  +      +W       
Sbjct: 217 RLLSAIFIRGPR--YGTRASTVVLVDHDGEVTFIERRMGPNGASEWNTGRFEF 267


In eukaryotes this family is predicted to play a role in protein secretion and Golgi organisation. In plants this family includes Solanum habrochaites Cwp, which is involved in water permeability in the cuticles of fruit. Mouse T10 has been found to be expressed during early embryogenesis in mice. This protein contains a conserved NRDE motif. Length = 267

>gnl|CDD|225869 COG3332, COG3332, Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 264
PF05742273 NRDE: NRDE protein; InterPro: IPR008551 This famil 100.0
COG3332270 Uncharacterized conserved protein [Function unknow 100.0
KOG2342|consensus280 100.0
PF03417225 AAT: Acyl-coenzyme A:6-aminopenicillanic acid acyl 94.96
cd01935229 Ntn_CGH_like Choloylglycine hydrolase (CGH)_like. 80.26
>PF05742 NRDE: NRDE protein; InterPro: IPR008551 This family is found in eukaryotes, prokaryotes and viruses and has no known function Back     alignment and domain information
Probab=100.00  E-value=9.5e-62  Score=439.35  Aligned_cols=236  Identities=29%  Similarity=0.493  Sum_probs=205.2

Q ss_pred             CCCccccCCCceEEeccCCCCCCccEEEecCCCcEEEEeCCCCCCCC--CCCCCcchHHHHhhcCCCCHHHHHHHHHhcc
Q psy1550           7 KPNPCTNGLIEMLLEVSQDAVKGGTWLATSTNGKLGILLNVLGENSR--PNGRDRGPLVVKYVEGQKSAEEYLTDLKKET   84 (264)
Q Consensus         7 ~p~~~~~~~~~IlagrD~~~~~GGTWLGi~~~Gr~a~LtN~~~~~~~--~~~~SRG~Lv~~fL~~~~s~~~y~~~l~~~~   84 (264)
                      +|..+|++.++||||||+++++||||||||++||||||||++++...  .+++|||.||.+||+++.++++|++.+.++.
T Consensus        31 ~~a~~w~~~~~il~g~D~~~~~gGTWlGi~~~Gr~a~LtN~~~~~~~~~~~~~SRG~Lv~~fL~~~~~~~~~~~~l~~~~  110 (273)
T PF05742_consen   31 APAHWWEEHPNILAGRDLKAPEGGTWLGINKQGRFAALTNYREPNPPPDAGARSRGELVKDFLTSNASPEEYLEELAKEA  110 (273)
T ss_pred             cccceeeehheEEEecCCCCCCCCEEEEECCCCeEEEEECCCCccccccccccCcchhhHhhhccCccHHHHHHHHHHhc
Confidence            57889999999999999993449999999999999999998875333  3368999999999999999999999999888


Q ss_pred             cCCcccceEEEEEeccC-CceeEEEEeCCCCCCCCCccccccccccccCCcEEEEcCCCCCCCchhhhHhHHHHHHHHHH
Q psy1550          85 EENVFNGFHIVLLELTL-QSTNIYHFSNIAPLDSPSTKVTNVTNKQENKDHVYGFGNSQCTSQPFQKVIFGKEKFAEIVN  163 (264)
Q Consensus        85 ~~~~y~gFnLv~gd~~~-~~~~l~~~~N~~~~~~~~~~~~~~~~~~~l~~g~~glSN~~l~d~pwpKv~~gk~~~~~~~~  163 (264)
                      ++  |+|||||+||+.. ....++|++|+... ...       .+..+.+|+|||||+.| |+|||||++|+++|+++++
T Consensus       111 ~~--y~gFnLv~~d~~~~~~~~~~~~sn~~~~-~~~-------~~~~l~~g~hglSN~~l-d~pWpKv~~gk~~l~~~~~  179 (273)
T PF05742_consen  111 HD--YNGFNLVVGDLSKTGGSELYYYSNRGDK-DPI-------VIEELPPGVHGLSNSLL-DTPWPKVERGKQLLEEILE  179 (273)
T ss_pred             Cc--cCCEEEEEEEcccCCcceEEEEEeccCC-CCc-------eeEEccCCceEEcCCCC-CCCccchhHHHHHHHHHHh
Confidence            88  9999999999983 22239999999886 210       13578999999999999 9999999999999999998


Q ss_pred             hccCCcchHHHHHHHHHhhccCCCCCCCchhhhhccCCCcH-Hhhh--cccceeEeCCCCCCccceeEEEEEeeCCeEEE
Q psy1550         164 KFNRKSESQNLIQNILDLMKNKQSNYPDPEIDRKAEADMDE-DYKM--RYSRVCVDISSIFYGTRTHSIILVDHNNVMDF  240 (264)
Q Consensus       164 ~~~~~~~~~~li~~L~~lL~d~~~~~pd~~lp~~t~~~~~~-~~e~--~lssifI~~~~~~YGTRssTvIlvd~~g~v~f  240 (264)
                      ... ..++++|+++||++|++++.++||++||+ +++  +. ++++  .||||||..+  .|||||||||+||++|+|+|
T Consensus       180 ~~~-~~~~~~l~~~l~~~L~~~~~~~~d~~l~~-~g~--~~~~~~~~~~lssifi~~~--~YGTRssTvIlvd~~g~v~f  253 (273)
T PF05742_consen  180 QSN-ESSEEELIEELFELLSDDTQCAPDEQLPD-TGI--GLPELERPINLSSIFIRGP--YYGTRSSTVILVDRDGKVTF  253 (273)
T ss_pred             ccc-CCCHHHHHHHHHHHhcCCCcCCChhHccc-cCC--CcchhhhhcccccccccCC--CccCeeEEEEEEecCCCEEE
Confidence            654 45778999999999999767789999996 554  44 7888  8999999976  89999999999999999999


Q ss_pred             EEEEecCCCC-ceeeEEEEE
Q psy1550         241 HEWTLDYETK-KWIHTHIRK  259 (264)
Q Consensus       241 ~Er~~~~~~~-~~~~~~~~f  259 (264)
                      +||+|.+++. +|++++|+|
T Consensus       254 ~Er~~~~~~~~~w~~~~f~f  273 (273)
T PF05742_consen  254 IERTLDDSGASEWEEQRFEF  273 (273)
T ss_pred             EEEEecCCCCccceeeEEeC
Confidence            9999987765 799999998



P54797 from SWISSPROT has been found to be expressed during early embryogenesis in Mus sp [].

>COG3332 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG2342|consensus Back     alignment and domain information
>PF03417 AAT: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase This family belongs to family C45 of the peptidase classification Back     alignment and domain information
>cd01935 Ntn_CGH_like Choloylglycine hydrolase (CGH)_like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query264
3gvz_A299 Uncharacterized protein CV2077; alpha-beta protein 93.83
2x1d_A357 Acyl-coenzyme A\:6-aminopenicillanic-acid-acyltran 92.33
2bjf_A329 Choloylglycine hydrolase; amidohydrolase, NTN-hydr 81.34
>3gvz_A Uncharacterized protein CV2077; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Chromobacterium violaceum atcc 12472} Back     alignment and structure
Probab=93.83  E-value=3.4  Score=36.74  Aligned_cols=135  Identities=7%  Similarity=0.045  Sum_probs=75.9

Q ss_pred             ccEEEecCCCcEEEEeCCCCC-CCCCCCCCcchHHHHhhcCCCCHHHHHHHHHhcccCCcccceEEEEEeccCCceeEEE
Q psy1550          30 GTWLATSTNGKLGILLNVLGE-NSRPNGRDRGPLVVKYVEGQKSAEEYLTDLKKETEENVFNGFHIVLLELTLQSTNIYH  108 (264)
Q Consensus        30 GTWLGi~~~Gr~a~LtN~~~~-~~~~~~~SRG~Lv~~fL~~~~s~~~y~~~l~~~~~~~~y~gFnLv~gd~~~~~~~l~~  108 (264)
                      |...|+|..|-.+.++..... ...........++...|....+.+|.++.|.+....  -.++|++++|... . ...-
T Consensus        79 ~~~dGmNe~GLav~~n~l~~~~~~~~~g~p~~~~~r~iL~~~aTv~EAv~~L~~~~~~--as~~h~~iaD~~g-~-~~vE  154 (299)
T 3gvz_A           79 GIKAGVNQKGLAVVAAEASSLPRALRADSARHGVLTRLLRDYGSLDEVASAADKLFAQ--ARPVFLLLADAGG-L-MQVE  154 (299)
T ss_dssp             SEEEEEETTSCEEEEECCTTSCTTTC------CCHHHHHHHCCSHHHHHHTHHHHTTT--SCSEEEEEEETTE-E-EEEE
T ss_pred             cccceEcCcCeEEEecccccccccccCCCCHhHHHHHHHhcCCCHHHHHHHHHhccCC--ccceEEEEEeCCC-c-EEEE
Confidence            578999999999998433221 111111233345556676667888888888733333  5689999999764 2 1222


Q ss_pred             EeCCCCCCCCCccccccccccccCCcEEEEcCCCCCCCchhh-----h----HhHHHHHHHHHHhccCCcchHHHHHHHH
Q psy1550         109 FSNIAPLDSPSTKVTNVTNKQENKDHVYGFGNSQCTSQPFQK-----V----IFGKEKFAEIVNKFNRKSESQNLIQNIL  179 (264)
Q Consensus       109 ~~N~~~~~~~~~~~~~~~~~~~l~~g~~glSN~~l~d~pwpK-----v----~~gk~~~~~~~~~~~~~~~~~~li~~L~  179 (264)
                      ++..+..  .         +..-..|+..-+|+.+ ...+.+     .    .| .+.+++++++.. ..+    .+.++
T Consensus       155 ~~p~g~~--~---------v~~~~~g~lvhTNHf~-~~~~~~~~~~~~~~S~~R-~~rl~~lL~~~~-~~t----~~~~~  216 (299)
T 3gvz_A          155 IGQHGRY--R---------LIRQQSGTLAHTNHYA-DTSLLDGAQTIGPSSQAR-LERIRFLLDQHP-AHT----LSEFE  216 (299)
T ss_dssp             ECSSSCE--E---------EEEESSEEEEECSSCS-CGGGSSSCCCCCHHHHHH-HHHHHHHHTTSS-SBC----HHHHH
T ss_pred             EcCCceE--E---------EEECCCCEEEEccccc-chhhccccCCcCCCcHHH-HHHHHHHHhhcC-CCC----HHHHH
Confidence            2222111  0         1223468889999998 544322     1    22 344566665422 112    46788


Q ss_pred             HhhccCC
Q psy1550         180 DLMKNKQ  186 (264)
Q Consensus       180 ~lL~d~~  186 (264)
                      ++|+|..
T Consensus       217 ~iL~D~~  223 (299)
T 3gvz_A          217 RLSRDRH  223 (299)
T ss_dssp             HHHTCCC
T ss_pred             HHhCCCC
Confidence            9999954



>2x1d_A Acyl-coenzyme A\:6-aminopenicillanic-acid-acyltransferase 40 kDa form; zymogen, NTN-hydrolase, penicillin biosynthesis; 1.64A {Penicillium chrysogenum} PDB: 2x1e_A* 2x1c_A Back     alignment and structure
>2bjf_A Choloylglycine hydrolase; amidohydrolase, NTN-hydrolase, bIle acids, BSH; HET: DXC; 1.67A {Clostridium perfringens} PDB: 2bjg_A 2rlc_A* 2rf8_A 2rg2_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00