Diaphorina citri psyllid: psy15549


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-
MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGKVLGEKQTGNKVSPTDKSSEDTQKISVKNEKGSNSQVVEAVTSDIKESKDNNTPAEAMEVDPVPPETNAECPSTPKTHGGTPNKGGTPSKTPRRVQLITLSSPNRKRKQDEEKIRETIKENDAKKACLDEKEGGKK
ccEEEccEEECccccEEEEEEEcccccccccEEEECcccccEEEEEEcccccccEEEEEEcccccccccccccccccccccccEEEEEEcccccEEEECccccEEEEEcccccccccccccccccccccccEEEEEEcccccEEEEEcccccEEEEEccccccccccccccccccccccCEEEEEEEcccccccEEEEEEcccccEEEEECccccEEEEEccccCEEEEEccccccEEEEEEcccccEEEEccccccEEEEEcccccEEEEEcccccccccccccccEEEEccccccccccEEEEEEcccccEEEEccccccccccccccEEEEEEEEccccccccCCcccccccEEEEECcccccccccccccccccccccEEEEEEcccEEEEEEcccccEEEEEcccccccEEEEEEcccccEEEEECccccEEEEEccccCEEcccccccccEEEEEEccccccEEcccccccEEcccccccccEEccccccccccccccccccEEEEEcccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccCEEEEEEccccccccccHHHHHccccccccccccccccccccc
*KCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ*************NVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKG***********************************************************************************************************************************************************
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MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGKVLGEKQTGNKVSPTDKSSEDTQKISVKNEKGSNSQVVEAVTSDIKESKDNNTPAEAMEVDPVPPETNAECPSTPKTHGGTPNKGGTPSKTPRRVQLITLSSPNRKRKQDEEKIRETIKENDAKKACLDEKEGGKK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Chromatin assembly factor 1 subunit B Complex that is thought to mediate chromatin assembly in DNA replication and DNA repair. Assembles histone octamers onto replicating DNA in vitro. CAF-1 performs the first step of the nucleosome assembly process, bringing newly synthesized histones H3 and H4 to replicating DNA; histones H2A/H2B can bind to this chromatin precursor subsequent to DNA replication to complete the histone octamer. The CCR4-NOT complex functions as general transcription regulation complex.confidentQ13112
Chromatin assembly factor 1 subunit FAS2 homolog Component of the chromatin assembly factor complex (CAF-1) involved in chromatin assembly following DNA replication and DNA repair. Required for several aspects of development, including apical meristem maintenance by regulating the durations of the S-and G2-phases of the cell cycle through its chromatin assembly activity.confidentQ6ZD63
Uncharacterized WD repeat-containing protein C26H5.03 confidentO13985

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0033186 [CC]CAF-1 complexprobableGO:0043234, GO:0005575, GO:0032991
GO:0005654 [CC]nucleoplasmprobableGO:0005575, GO:0043231, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0006281 [BP]DNA repairprobableGO:0090304, GO:0034641, GO:0006807, GO:0044699, GO:0006139, GO:0051716, GO:0044260, GO:0071704, GO:1901360, GO:0009987, GO:0006725, GO:0006974, GO:0006950, GO:0044763, GO:0008152, GO:0046483, GO:0044238, GO:0050896, GO:0044237, GO:0043170, GO:0033554, GO:0006259, GO:0008150
GO:0048568 [BP]embryonic organ developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0060041 [BP]retina development in camera-type eyeprobableGO:0032502, GO:0032501, GO:0044707, GO:0007423, GO:0048856, GO:0044767, GO:0048513, GO:0001654, GO:0048731, GO:0008150, GO:0043010, GO:0007275, GO:0044699
GO:0003682 [MF]chromatin bindingprobableGO:0003674, GO:0005488
GO:0006335 [BP]DNA replication-dependent nucleosome assemblyprobableGO:0034728, GO:0071103, GO:0022607, GO:0043933, GO:0034723, GO:0090304, GO:0034641, GO:0006807, GO:0016043, GO:0031497, GO:0034622, GO:0044699, GO:0071824, GO:0006139, GO:0044260, GO:0006325, GO:1901360, GO:0006323, GO:0065003, GO:0071704, GO:0071840, GO:0065004, GO:0009987, GO:0006725, GO:0044763, GO:0008152, GO:0046483, GO:0006996, GO:0044238, GO:0051276, GO:0006334, GO:0006333, GO:0044237, GO:0043170, GO:0044085, GO:0006259, GO:0008150
GO:0006461 [BP]protein complex assemblyprobableGO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0051082 [MF]unfolded protein bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0000278 [BP]mitotic cell cycleprobableGO:0008150, GO:0009987, GO:0044763, GO:0044699, GO:0007049

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GOT, chain B
Confidence level:very confident
Coverage over the Query: 7-43,58-164,186-274,296-318,389-440
View the alignment between query and template
View the model in PyMOL
Template: 1NR0, chain A
Confidence level:very confident
Coverage over the Query: 6-170,185-363,380-483
View the alignment between query and template
View the model in PyMOL
Template: 1NR0, chain A
Confidence level:very confident
Coverage over the Query: 10-43,58-162,184-485
View the alignment between query and template
View the model in PyMOL