Psyllid ID: psy15549
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 621 | 2.2.26 [Sep-21-2011] | |||||||
| Q13112 | 559 | Chromatin assembly factor | yes | N/A | 0.800 | 0.889 | 0.409 | 1e-104 | |
| Q9D0N7 | 572 | Chromatin assembly factor | yes | N/A | 0.616 | 0.669 | 0.454 | 1e-102 | |
| Q5R1S9 | 566 | Chromatin assembly factor | yes | N/A | 0.723 | 0.793 | 0.412 | 1e-102 | |
| Q9SXY1 | 487 | Chromatin assembly factor | yes | N/A | 0.619 | 0.790 | 0.408 | 9e-78 | |
| Q6ZD63 | 505 | Chromatin assembly factor | yes | N/A | 0.742 | 0.912 | 0.359 | 2e-72 | |
| Q04199 | 468 | Chromatin assembly factor | yes | N/A | 0.615 | 0.816 | 0.322 | 1e-62 | |
| O13985 | 512 | Uncharacterized WD repeat | yes | N/A | 0.621 | 0.753 | 0.316 | 2e-58 | |
| Q6BYU4 | 985 | Protein HIR1 OS=Debaryomy | no | N/A | 0.489 | 0.308 | 0.291 | 1e-36 | |
| Q6FVD3 | 840 | Protein HIR1 OS=Candida g | no | N/A | 0.640 | 0.473 | 0.267 | 2e-35 | |
| Q6CXX3 | 861 | Protein HIR1 OS=Kluyverom | no | N/A | 0.534 | 0.385 | 0.271 | 3e-35 |
| >sp|Q13112|CAF1B_HUMAN Chromatin assembly factor 1 subunit B OS=Homo sapiens GN=CHAF1B PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/550 (40%), Positives = 308/550 (56%), Gaps = 53/550 (9%)
Query: 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154
L ++G D IW + + G A VEF S+L+RH KAVNVVRFSP GE+LASG D++ I+
Sbjct: 32 LASAGVDTNVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVIL 91
Query: 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214
+WK +++ + + DE +NKE+W V K LRGHLEDVYDI W+ + S SVDN
Sbjct: 92 LWKVNDNKEPEQIAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLMASASVDN 151
Query: 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACR 274
TAI+WDV KG+ + I EHK +VQGV WDP QYVATLS DR LR YSIQ K+V
Sbjct: 152 TAIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRVLRVYSIQKKRVAFNV-- 209
Query: 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334
SK+ E + +FHDD+MKSFFRRL+F+PDG LL+ P+GC+E+ ++ ++ T
Sbjct: 210 SKMLSGIGAEGEARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCVESGENV---MNTT 266
Query: 335 HVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDK--PLFKLPYRIVIAVATENN 392
+VF+R L +P LP ++AV+CCPV FEL+P + L LPYR+V AVA+E++
Sbjct: 267 YVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFELRPVVETGVELMSLPYRLVFAVASEDS 326
Query: 393 ILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP 452
+LLYDTQ + PF +++NIHY L+DI+WSSDG L SSTDGYCS ++F +E+GIP
Sbjct: 327 VLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDELGIPL-- 384
Query: 453 PSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGKVLGEKQTGNKVSPTDKSSEDTQKISV 512
K +PV + P +A++ K QT SP + E T
Sbjct: 385 ------------KEKPVLNMRTPDTAKKTK--------SQTHRGSSPGPRPVEGTPASRT 424
Query: 513 KNEKGSNS---QVVEAVTSDIKESKDNNTPAEAMEVDPVPPETNAECPSTPKTHGG---- 565
++ + Q +A + + TPA + P P E PS+ T
Sbjct: 425 QDPSSPGTTPPQARQAPAPTVIRDPPSITPAVKSPL-PGPSEEKTLQPSSQNTKAHPSRR 483
Query: 566 -TPNKGGTPSK-TPRRVQLITL--------------SSPNRKRKQDEEKIRETIKENDAK 609
T N SK TPRR+ L L S+P+ + Q E + K
Sbjct: 484 VTLNTLQAWSKTTPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPPELK 543
Query: 610 KACLDEKEGG 619
+ LDE +GG
Sbjct: 544 RPRLDENKGG 553
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Complex that is thought to mediate chromatin assembly in DNA replication and DNA repair. Assembles histone octamers onto replicating DNA in vitro. CAF-1 performs the first step of the nucleosome assembly process, bringing newly synthesized histones H3 and H4 to replicating DNA; histones H2A/H2B can bind to this chromatin precursor subsequent to DNA replication to complete the histone octamer. The CCR4-NOT complex functions as general transcription regulation complex. Homo sapiens (taxid: 9606) |
| >sp|Q9D0N7|CAF1B_MOUSE Chromatin assembly factor 1 subunit B OS=Mus musculus GN=Chaf1b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/425 (45%), Positives = 262/425 (61%), Gaps = 42/425 (9%)
Query: 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154
L ++G D IW L G A VEF S+L+RH KAVNVVRFSP GE+LASG D++ I+
Sbjct: 32 LASAGVDTAVRIWKLERGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVIL 91
Query: 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214
+WK ++ + + +E +NKE+W V K LRGHLEDVYDI W+ + S SVDN
Sbjct: 92 LWKMNDSKEPEQIAFQDEEEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLMTSASVDN 151
Query: 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV---ISR 271
T I+WDV KG+ + I EHK +VQGV WDP QY+ATLS DR LR Y+ Q K+V IS+
Sbjct: 152 TVIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYIATLSCDRVLRIYNTQKKRVAFNISK 211
Query: 272 ACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPI 331
+ P + +FHDD+MKSFFRRL+F+PDG LL+ P+GC+E+ ++
Sbjct: 212 MLSGQGPEGEARSFR-----MFHDDSMKSFFRRLSFTPDGSLLLTPAGCMESGENV---T 263
Query: 332 SVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKP------SDDKP---LFKLPYR 382
+ T+VF+R L +P LP ++AV+CCPV FEL+P + ++P L LPYR
Sbjct: 264 NTTYVFSRKHLKRPIAHLPCPGKATLAVRCCPVYFELRPVAETEKASEEPSPELVNLPYR 323
Query: 383 IVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442
+V AVA+E+++LLYDTQ + PF +++NIHY L+DI+WSSDG L SSTDGYC+ ++F
Sbjct: 324 MVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCTFVTFE 383
Query: 443 DNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGKVLGEKQTGNKVSPTDK 502
E+GIP K +PV S P +A++AK QT SP +
Sbjct: 384 KGELGIPL--------------KEKPVLSIRTPDTAKKAK--------NQTHQGSSPGSR 421
Query: 503 SSEDT 507
S E T
Sbjct: 422 SVEGT 426
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Complex that is thought to mediate chromatin assembly in DNA replication and DNA repair. Assembles histone octamers onto replicating DNA in vitro. CAF-1 performs the first step of the nucleosome assembly process, bringing newly synthesized histones H3 and H4 to replicating DNA; histones H2A/H2B can bind to this chromatin precursor subsequent to DNA replication to complete the histone octamer. The CCR4-NOT complex functions as general transcription regulation complex. Mus musculus (taxid: 10090) |
| >sp|Q5R1S9|CAF1B_CHICK Chromatin assembly factor 1 subunit B OS=Gallus gallus GN=CHAF1B PE=1 SV=1 | Back alignment and function description |
|---|
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 297/514 (57%), Gaps = 65/514 (12%)
Query: 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154
L ++G D +W + + G A VEF S+L+RH KAVNVVRFSP+GE+LASG D++ I+
Sbjct: 32 LASAGVDTAVRVWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPSGEVLASGGDDAVIL 91
Query: 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214
+WK ++L + DE +NKE+W V K LRGHLEDVYDI W+ ++ S SVDN
Sbjct: 92 LWKLNDSKELEPLAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWTSDGNYMASASVDN 151
Query: 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACR 274
TAIMWDV KG+ + IL EHK +VQG+ WDP QY+ATLS DR LR Y+ Q+K+V
Sbjct: 152 TAIMWDVVKGQKVSILNEHKSYVQGITWDPLGQYIATLSCDRVLRVYNTQTKRVAFNV-- 209
Query: 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334
+K+P +S E + +FHDD+MKSFFRRL+F+PDG LL+ P+GC+E+ ++ + T
Sbjct: 210 TKMPSESGAEGEARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCVESGENV---TNTT 266
Query: 335 HVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDK---------PLFKLPYRIVI 385
+VF+R L +P LP ++AV+CCPV FEL+ + +K L LPYR+V
Sbjct: 267 YVFSRNNLKRPMGHLPCPGKATLAVRCCPVYFELRQALNKGEVSQKSSPALLNLPYRLVF 326
Query: 386 AVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445
AVA+E+++L YDT+ + PF +++NIHY L+DI+WSSDG L SSTDGYCS ++F +E
Sbjct: 327 AVASEDSVLFYDTEQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDE 386
Query: 446 IGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGKVLGEK-----QTGNKVSPT 500
+GIP ++KP Q V+ EK Q +SP
Sbjct: 387 LGIPL---------------------KEKP----QIHVRTSVVTEKKVKKSQPNKVISPG 421
Query: 501 DKSSEDTQKISVKNEKGSNSQVVEAVTSDIKESKDNNTPAEAMEVDPVPPETNAE----C 556
+ +E T S S + + +KD P+ + + VP ++ E
Sbjct: 422 SRLTEGT----------SLSTPTLQPKTPVAAAKD--LPSTPVGIKNVPVSSSEERKISQ 469
Query: 557 PSTPKTHGGTP-----NKGGTPSKTPRRVQLITL 585
P++ T P N SKTPRRV LI L
Sbjct: 470 PASQSTKVNQPRRITLNTLQAWSKTPRRVNLIPL 503
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Complex that is thought to mediate chromatin assembly in DNA replication and DNA repair. Involved in rapid nucleosome formation during DNA replication. Gallus gallus (taxid: 9031) |
| >sp|Q9SXY1|FAS2_ARATH Chromatin assembly factor 1 subunit FAS2 OS=Arabidopsis thaliana GN=FAS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 291 bits (745), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 250/424 (58%), Gaps = 39/424 (9%)
Query: 82 KAVNVVRFSPNGELLA-SGDDVGKEIWYLT--ERESGIANVEFASDLSRHQKAVNVVRFS 138
K V V F P LLA +G D ++W + + E + +V + S L+ H AVN +RFS
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFS 73
Query: 139 PNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198
P+GELLASG D + +WK L N+ W V K L H +DV D+
Sbjct: 74 PSGELLASGADGGELFIWK--------------LHPSETNQS-WKVHKSLSFHRKDVLDL 118
Query: 199 SWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSL 258
WSP +LISGSVDN+ I+WDV+KG IL H +VQGVAWDP +YVA+LSSDR+
Sbjct: 119 QWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTC 178
Query: 259 RTYS----IQSKKV--ISRACRSKLPVDSSHELFDKV----VPLFHDDTMKSFFRRLTFS 308
R Y+ +SK V ++ C+ + + + + D+ LFHD+T+ SFFRRL++S
Sbjct: 179 RIYANKPQTKSKGVEKMNYVCQHVI-MKADQQRGDETKTIKTHLFHDETLPSFFRRLSWS 237
Query: 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFEL 368
PDG L+ P+G + S T + ++ T+VF+R L++PA+ LP V V+ CPV F+L
Sbjct: 238 PDGSFLLIPAGSFKVS-PTSEAVNATYVFSRKDLSRPALQLPGASKPVVVVRFCPVAFKL 296
Query: 369 K-PSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVL 427
+ S ++ FKLPYR+V A+AT N++ +YDT+ +P A +A +HY +TDITWS + L
Sbjct: 297 RGSSSEEGFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYL 356
Query: 428 IASSTDGYCSIISFGDNEIG------IPYVPPSGEESKENDPTKGEPVRSEDKP-RSAEQ 480
SS DGYC+++ F D E+G + P GEE K++D KG+ + +E P S +Q
Sbjct: 357 ALSSQDGYCTLVEFEDKELGEAVSISVGKKPVDGEE-KKHDLEKGDELMTETTPDESKKQ 415
Query: 481 AKGE 484
A+ E
Sbjct: 416 AELE 419
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Component of the chromatin assembly factor complex (CAF-1) involved in chromatin assembly following DNA replication and DNA repair. Required for several aspects of development, including seedling growth and leaf hair differentiation. Plays a critical role in the organization of shoot apical meristem (SAM) and root apical meristem (RAM) during postembryonic development by facilitating stable maintenance of gene expression states. Seems not required to maintain transcriptional repression of heterochromatic genes. Involved in heterologous recombination. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q6ZD63|FAS2_ORYSJ Chromatin assembly factor 1 subunit FAS2 homolog OS=Oryza sativa subsp. japonica GN=FAS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/512 (35%), Positives = 262/512 (51%), Gaps = 51/512 (9%)
Query: 81 QKAVNVVRFSPNGELLASG-DDVGKEIWYLTERESG--IANVEFASDLSRHQKAVNVVRF 137
Q+ V + F P LA+G D +IW + +S + + S LS H AVNV+RF
Sbjct: 13 QQPVLTLDFHPVSRRLATGGSDHDIKIWVIASDDSDKKLPTATYHSSLSSHSSAVNVLRF 72
Query: 138 SPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYD 197
SP+GE LASG D II+WK + D E W V K L H +DV D
Sbjct: 73 SPSGENLASGADGGGIIIWKLHSTDD---------------GEAWKVQKTLLFHHKDVLD 117
Query: 198 ISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRS 257
+ WS L+S SVDN+ I+WD KG L H +VQGVAWDP QY+A+LSSDR+
Sbjct: 118 LQWSQDGAFLVSASVDNSCIVWDAIKGSVQQKLEGHLHYVQGVAWDPLGQYIASLSSDRT 177
Query: 258 LRTYSIQ----SKKV--ISRACRSKLPVDSSHELFDKVVP-----LFHDDTMKSFFRRLT 306
R Y+ + SK ++ C+ L V + H+ D+ P LFHD+T+ SFFRRL
Sbjct: 178 CRIYANKPQGKSKNTDRMNFVCQHTL-VKAEHQNHDESKPPVRAHLFHDETLPSFFRRLA 236
Query: 307 FSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLF 366
+SPDG L+ P+G + S I+ +V +R L++PA+ LP VAV+ CPVLF
Sbjct: 237 WSPDGSFLVLPAGLCKYSSEV---INTAYVMSRRDLSRPAIQLPGASKAIVAVRFCPVLF 293
Query: 367 ELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKV 426
+L+ S FKLPYR++ AVAT N++ +YDT+ +P A +HY +TDI WSSD K
Sbjct: 294 KLRGSQSDCFFKLPYRVIFAVATLNSLYVYDTESVAPILIHAGLHYAAITDIAWSSDAKY 353
Query: 427 LIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPT--KGEPVRSEDKPRSAEQAKGE 484
L SS D +C+II F + E+G+PY +E E + +P++ + A +K +
Sbjct: 354 LAVSSRDCFCTIIEFENEELGLPYNLSGTKELDEGNTNCENMKPLKVDSMEIDAGSSKAK 413
Query: 485 GKVLGEKQTGNKVSPTDKSSEDTQKISVKNEKGSNS-------QVVEAVTSDIKESKDNN 537
K +V+P+ + K+ N+ V+ + D+ E+K
Sbjct: 414 IKA---SSAAVEVTPSPPVLAQNNILMTKDVAEGNATSENDRPSAVDNMEVDVGENK--- 467
Query: 538 TPAEAMEVDPVPPETNAECPSTPKTHGGTPNK 569
MEV PV + A ST + P K
Sbjct: 468 ---AKMEVTPVAVQVTAPPVSTKNSASSKPTK 496
|
Component of the chromatin assembly factor complex (CAF-1) involved in chromatin assembly following DNA replication and DNA repair. Required for several aspects of development, including apical meristem maintenance by regulating the durations of the S-and G2-phases of the cell cycle through its chromatin assembly activity. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q04199|CAC2_YEAST Chromatin assembly factor 1 subunit p60 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAC2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/434 (32%), Positives = 237/434 (54%), Gaps = 52/434 (11%)
Query: 90 SPNGELLASGDDVGKEIWYLTERESG-------IANVEFASDLSRHQKAVNVVRFSPNGE 142
S N +L +G D IW L E+G I +++F L+ H++A+NV+RF+ G+
Sbjct: 25 SANDKLFTAGGDNKVRIWKLNRDENGQNGGVRKIESLDFLGSLTHHEQAINVIRFNSKGD 84
Query: 143 LLASGDDESTIIVWKQK---TDQD---LPEFPSSNLDEENVNKEHWIVTKILRG-----H 191
+LAS D+ +++WKQ+ T Q+ P + E + NKE W+V K LRG
Sbjct: 85 VLASAGDDGQVLLWKQEDPNTQQESVVRPFGMDAETSEADENKEKWVVWKRLRGGSGATA 144
Query: 192 LEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251
++YD++WSP + +++ +DN+ ++DV G + ++H +VQGVAWDP NQ++ +
Sbjct: 145 AAEIYDLAWSPDNRNIVVACMDNSIRLFDVGAGMLVCGQSDHGHYVQGVAWDPLNQFILS 204
Query: 252 LSSDRSLRTYSI--------QSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303
S+DRSL Y + K+ S+ +++LP + LFH++T+ SFFR
Sbjct: 205 QSADRSLHVYGVILSSAGVVTGLKLRSKIAKAELPCPGD---VLRTNYLFHNETLPSFFR 261
Query: 304 RLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACL--------NKPAVCLPSLQYY 355
R + SP G L++ PSG + + + + +V+TR+ + N+PA+ +PSL+
Sbjct: 262 RCSISPCGGLVVIPSGVYKVAGD--EVANCVYVYTRSGILNSAGGVKNRPAIRIPSLKKP 319
Query: 356 SVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKL 415
++ PV +E + K + KLPY++V A+AT N +L+YDT P + NIHY+ +
Sbjct: 320 ALMAAFSPVFYE---TCQKSVLKLPYKLVFAIATTNEVLVYDTDVLEPLCVVGNIHYSPI 376
Query: 416 TDITWSSDGKVLIASSTDGYCSIISFG-DNEIGIPYVPPSGEESKENDPTKGEPVRSEDK 474
TD+ WS DG L+ SSTDG+CS +S + + G PP+ EP+ +++
Sbjct: 377 TDLAWSEDGSTLLISSTDGFCSYVSIDTETQFGSRIEPPA---------MHAEPLDTDES 427
Query: 475 PRSAEQAKGEGKVL 488
+A+ + G ++
Sbjct: 428 AVAAKNQREAGGIV 441
|
Acts as a component of chromatin assembly factor 1 (CAF-1), which assembles histone octamers onto replicating DNA in vitro. It performs the first step of the nucleosome assembly process, bringing newly synthesized histones H3 and H4 to replicating DNA; histones H2A/H2B can bind to this chromatin precursor subsequent to DNA replication to complete the histone octamer. p50 and p60 form complexes with newly synthesized histones H3 and acetylated H4 in cell extracts. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|O13985|YEG3_SCHPO Uncharacterized WD repeat-containing protein C26H5.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26H5.03 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/474 (31%), Positives = 229/474 (48%), Gaps = 88/474 (18%)
Query: 99 GDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158
G D IW L ES VE+ S LSRH +AVNVVRF+P G +LA+ DE TI++W
Sbjct: 38 GGDSKIRIWQLITSESS-TKVEYLSTLSRHTQAVNVVRFNPEGNILATAGDEGTIMLW-V 95
Query: 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIM 218
T+ + + + +E + KE+W V + R ++YD+ WS S LI+G++DN+ +
Sbjct: 96 PTNTPITTL-ADDAEELALAKEYWKVKIVCRSMGSEIYDLCWSVDSNFLIAGAMDNSLRL 154
Query: 219 WDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKK---------VI 269
+D H G+ L +H +VQGV WDP NQY+ + SSDRS+ Y IQ +K +
Sbjct: 155 YDAHTGQLLTQKFDHSHYVQGVCWDPLNQYIVSESSDRSICLYEIQEEKKNPKKFQLVLK 214
Query: 270 SRACRSKL------------------------PVDSS---------HELFDKVVPLFHDD 296
SR CR + P+++S HE + D
Sbjct: 215 SRICRIEYNVTKFELISVTKPLNNDESSGISEPIETSNNNESPVSKHEALSSTANIVKDG 274
Query: 297 TMK------SFFRRLTFS-----------------PDGQLLIAPSGCLENSDSTRKPISV 333
+++ S ++++S PDG LL+ P+G L +
Sbjct: 275 SLERTEPPNSLNSKISYSLYCNETLVSFFRRPAFSPDGLLLVTPAGRLRPHGQPNFEVPY 334
Query: 334 T-HVFTRACLNK-PAVCLPSLQYYSVAVKCCPVLFELKPSDDKPL----FKLPYRIVIAV 387
T +++TR + K P CL + +AV+ P+ +EL + F LPYR+V AV
Sbjct: 335 TAYIYTRGSITKQPVACLNGFKKPVIAVRFSPIHYELNSFSNFSFTSVSFNLPYRMVFAV 394
Query: 388 ATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIG 447
A ++ + +YDTQ PF N+HY+ LTDI W+ DG VL+ +S DG+CS+I+F E+G
Sbjct: 395 ACQDAVYIYDTQTCKPFYRAVNLHYSNLTDIAWNDDGNVLLMTSIDGFCSVITFEPGELG 454
Query: 448 I------------PYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGKVLG 489
+ P S ++S++N T G P + PR E +K K +
Sbjct: 455 VKSQHKISLPEKRSASPSSIDDSQDN--TAGGPATTTLIPRKVESSKVSKKRIA 506
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q6BYU4|HIR1_DEBHA Protein HIR1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=HIR1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 165/329 (50%), Gaps = 25/329 (7%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIV 184
+SRH V V+FSP+G LASG D+ +++W++ D++ P E + EHW V
Sbjct: 85 MSRHNGVVTSVKFSPDGRFLASGSDDKIVLIWEK--DEEQANRPKQ-FGEAEADLEHWTV 141
Query: 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244
K L H D+ DI WSP + L++ +D + I+W+ + + H+ V+G+ +DP
Sbjct: 142 RKRLVAHDNDIQDICWSPDGSLLVTVGLDRSIIIWNGLTFERIKRYDIHQSMVKGIVFDP 201
Query: 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304
N++ AT S DRS+R + K +S + + H + D F + S+FRR
Sbjct: 202 ANKFFATASDDRSVRIFRYYRK--LSESSINNYEFQMEHIVIDP----FKKSPLTSYFRR 255
Query: 305 LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCC-- 362
+++SPDGQ + P ++T P++ + R + + + + CC
Sbjct: 256 MSWSPDGQHIAVP-------NATNGPVTSVAIINRT---NWGTDISLIGHEAPCEVCCFS 305
Query: 363 PVLFELKPSDDKPLFKLP---YRIVIAVATEN-NILLYDTQHASPFAFIANIHYTKLTDI 418
P LFE S+D K + ++A A ++ N++++ T+ + P +I +TD+
Sbjct: 306 PRLFEYDDSNDSQKNKNGMGNFTTILATAGQDQNLVVWTTRQSKPLVVAHDIVSGSITDM 365
Query: 419 TWSSDGKVLIASSTDGYCSIISFGDNEIG 447
W+ DG+ L S DG + +SF DNE+G
Sbjct: 366 CWAPDGQTLYFSCLDGSITCVSFEDNELG 394
|
Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle. Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) |
| >sp|Q6FVD3|HIR1_CANGA Protein HIR1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=HIR1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 203/452 (44%), Gaps = 54/452 (11%)
Query: 77 LSRHQKA----VNVVRFSPNGELLASGDDVGK-EIW---YLTERESGIANVEF-----AS 123
S H+++ + V SP+G+ +A+G GK IW L +G + V+ +
Sbjct: 9 FSHHEESRDYEIYTVDVSPDGKRVATGGLDGKIRIWSVDALVSAAAGESGVDRDTHRPLA 68
Query: 124 DLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWI 183
+SRH +V V+FSP+G LASG D+ +++W + F S KEHW
Sbjct: 69 SMSRHTGSVTCVKFSPDGNYLASGSDDRILLIWAMDEENHGGSFGSEG------EKEHWT 122
Query: 184 VTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD 243
V K L H D+ DI W+P S+ L++ +D + I+W+ + L H+ V+GV +D
Sbjct: 123 VRKRLVAHDNDIQDICWAPDSSILVTVGLDRSVIVWNGLNFERLKRFDVHQSLVKGVIFD 182
Query: 244 PKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303
P N+Y AT S DR++R + +S +V F + ++FR
Sbjct: 183 PANKYFATASDDRTMRVFRYHKTGEVSFTIEQ------------VIVEPFIASPLTTYFR 230
Query: 304 RLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCP 363
RL++SPDGQ + P ++T P+S + R + ++ L + + P
Sbjct: 231 RLSWSPDGQHIAVP-------NATNGPVSSVAIINRGTWDS-SISLIGHDAPTEVARFNP 282
Query: 364 VLFEL-----------KPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHY 412
LF+ + S D K I+ + ++ L+ T P +I
Sbjct: 283 RLFKSDVEKKAKNAKDELSKDTKNNKKLESIIATAGQDKSLALWITSRPRPIFVAYDIAQ 342
Query: 413 TKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSE 472
+TD+ W+ +G +L +S D ++ F NE+G+P +P G + E G S
Sbjct: 343 KSITDMAWNPNGNILFVTSLDSSIVMLMFDANELGMP-IPIEG--NMEQLHRYGVDKDSF 399
Query: 473 DKPRSAEQAKGEGKVLGEKQTGNKVSPTDKSS 504
D P S Q E K G K+ +++S + +S+
Sbjct: 400 DLPESVNQLLLEDK-YGTKKKQHELSSSTQST 430
|
Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle. Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) |
| >sp|Q6CXX3|HIR1_KLULA Protein HIR1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=HIR1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 179/379 (47%), Gaps = 47/379 (12%)
Query: 90 SPNGELLASGDDVGK-EIWYLTERESGIANVEFASD----------LSRHQKAVNVVRFS 138
SP+ + LA+G GK IW + + +N ++D +SRH +V V+FS
Sbjct: 26 SPDSQRLATGGLDGKIRIWSIPDILKFASNPNASTDKDILMKPLSTMSRHAGSVTTVKFS 85
Query: 139 PNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198
P+G+ LASG D+ +++W+ + P F + E+ + EHW V + L H D+ DI
Sbjct: 86 PDGKYLASGSDDRILLIWELEGGTTQPMFGA-----ESTDIEHWNVRRRLVAHDNDIQDI 140
Query: 199 SWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSL 258
W+P S+ ++S +D I+W+ + + H+ V+GV +DP N+Y AT S DR++
Sbjct: 141 CWAPDSSIMVSVGLDRAIIIWNGSTFEKVKRFDVHQSHVKGVVFDPANKYFATASDDRTI 200
Query: 259 RTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318
+ + R ++S + + F + ++FRRL++SPDGQ + AP
Sbjct: 201 KMF------------RYHKTGETSFSVEHVITEPFKGSPLTTYFRRLSWSPDGQHIAAP- 247
Query: 319 GCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFK 378
++ P+S + R P + Q VA P +F+ + DD
Sbjct: 248 ------NAMNGPVSTVAIIERGTWESPVSLVGHDQPTEVA-SFNPRIFK-RQKDDSTTDT 299
Query: 379 LPYR----------IVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLI 428
+ + IV + + + ++ T A P +I +TD++W+ DGK+L
Sbjct: 300 IDGKKTGISDEVDCIVASSGQDKTLAVWSTSKARPLIVAQDICGKSITDMSWTPDGKILF 359
Query: 429 ASSTDGYCSIISFGDNEIG 447
+S D +++F DNE G
Sbjct: 360 ITSLDSSIVVLTFEDNEFG 378
|
Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 621 | ||||||
| 383847607 | 518 | PREDICTED: chromatin assembly factor 1 s | 0.824 | 0.988 | 0.436 | 1e-129 | |
| 158285483 | 741 | AGAP007544-PA [Anopheles gambiae str. PE | 0.640 | 0.537 | 0.488 | 1e-127 | |
| 345489109 | 549 | PREDICTED: chromatin assembly factor 1 s | 0.826 | 0.934 | 0.428 | 1e-127 | |
| 312374653 | 2631 | hypothetical protein AND_15691 [Anophele | 0.647 | 0.152 | 0.497 | 1e-126 | |
| 195425417 | 755 | GK10714 [Drosophila willistoni] gi|19415 | 0.637 | 0.524 | 0.485 | 1e-125 | |
| 170051150 | 724 | chromatin assembly factor 1 subunit B [C | 0.628 | 0.538 | 0.496 | 1e-122 | |
| 328777669 | 537 | PREDICTED: chromatin assembly factor 1 s | 0.779 | 0.901 | 0.466 | 1e-120 | |
| 195153457 | 749 | GL17201 [Drosophila persimilis] gi|19411 | 0.718 | 0.595 | 0.432 | 1e-119 | |
| 198460559 | 749 | GA11885 [Drosophila pseudoobscura pseudo | 0.718 | 0.595 | 0.432 | 1e-119 | |
| 380015527 | 535 | PREDICTED: chromatin assembly factor 1 s | 0.779 | 0.904 | 0.467 | 1e-118 |
| >gi|383847607|ref|XP_003699444.1| PREDICTED: chromatin assembly factor 1 subunit B-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 262/600 (43%), Positives = 347/600 (57%), Gaps = 88/600 (14%)
Query: 1 MKCTIPEISWHNRDPVLSVDIQL----KQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTG 56
M CT PEISWHNRDPVLSVDIQ +K+ +R+ TGGADSHV
Sbjct: 1 MWCTTPEISWHNRDPVLSVDIQAGIYETVKKETFWRLATGGADSHVL------------- 47
Query: 57 KIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGI 116
IW+LT E G A V+ +DL RHQ+AVNVVRFSP+ ++LASGDD
Sbjct: 48 -IWHLTSNECGGATVKCVADLERHQRAVNVVRFSPSKDILASGDD--------------- 91
Query: 117 ANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEEN 176
ESTII+WKQK D + F +S +EN
Sbjct: 92 ---------------------------------ESTIILWKQKEDCEF--FINS---DEN 113
Query: 177 VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF 236
NKE W K+LRGHLEDVYDISWSP S L+SGSVDNTAI+WD+HKG+++ IL++HK F
Sbjct: 114 ENKEQWTSWKVLRGHLEDVYDISWSPDSNMLVSGSVDNTAILWDIHKGRSVAILSDHKGF 173
Query: 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDD 296
VQGVAWDP NQY+ ++S+DR LR I SK+ + + C++K+P H L DK V LF+DD
Sbjct: 174 VQGVAWDPCNQYICSISTDRMLRLIDINSKRTVQKVCKAKIPTPPDHALKDKTVRLFYDD 233
Query: 297 TMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYS 356
T KSFFRRLTFS DG L+I PSG +E ++T K + T +F+R L +P + LPS +
Sbjct: 234 TFKSFFRRLTFSLDGSLIIVPSGIIEPIETTEKICNATVIFSRHNLKEPLILLPSFDQCT 293
Query: 357 VAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLT 416
+AVKCCP+ FEL+ + LPYR+V AVAT++++ +YDTQ SP + ++NIHYT+LT
Sbjct: 294 IAVKCCPIYFELRKDGPTSMIALPYRMVFAVATQHSVFIYDTQQTSPVSVVSNIHYTRLT 353
Query: 417 DITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPR 476
D+TWSSDGK+LI SSTDGYCSII F E+G Y S P++
Sbjct: 354 DVTWSSDGKILIVSSTDGYCSIIHFQKGELGEEYKKES-----------SSPIKLSTNNN 402
Query: 477 SAEQAKGEGKVLGEKQTGNKVSPTDKSSEDTQKISVKNEKGSNSQVVEAVTSDIKESKDN 536
S + + K + G ++ TD + V++E S E ++ +S D+
Sbjct: 403 SKQSSVPNNKNV----VGGRLPTTDIDNSAMDIDIVEHETKVLSNNSECKLTESNKSLDS 458
Query: 537 NTPAEAMEVDPVPPETNAECPSTPKTHGGTPNKGGT--PSKTPRRVQLITLSSPNRKRKQ 594
NT ++ V + + ++ +K T PSK PRRVQLITLSSP +K+
Sbjct: 459 NTASKNQANLDVEETEDVKLIYNEESTNEISDKANTKVPSKAPRRVQLITLSSPKGHKKE 518
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|158285483|ref|XP_308335.3| AGAP007544-PA [Anopheles gambiae str. PEST] gi|157020014|gb|EAA03971.3| AGAP007544-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/469 (48%), Positives = 305/469 (65%), Gaps = 71/469 (15%)
Query: 1 MKCTIPEISWHNRDPVLSVDIQLK--QEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKI 58
MKC IPEISWHNRDPVLSVDIQ K ++D+ YR+ +GG DSHV I
Sbjct: 1 MKCQIPEISWHNRDPVLSVDIQPKGANDRDHQYRLASGGTDSHVL--------------I 46
Query: 59 WYLTER-ESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIA 117
WY+ + E G N+E A+DL+RHQ+AVN VR+SP+GELLASGDD
Sbjct: 47 WYMIQTPECGTINLELAADLTRHQRAVNAVRWSPSGELLASGDD---------------- 90
Query: 118 NVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENV 177
ES I +WKQK + + + D+
Sbjct: 91 --------------------------------ESVIFIWKQKGETETLNILENTNDQ--- 115
Query: 178 NKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFV 237
+KE W+ KILRGH+EDVYD+SWS S LISGSVDN+AI+WDV +GKN IL +HK FV
Sbjct: 116 DKETWLTMKILRGHMEDVYDLSWSANSQFLISGSVDNSAIVWDVQRGKNTAILQDHKGFV 175
Query: 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDT 297
QGVAWDP+N+Y+ATLS+DR R Y +Q+K+V+SR + LPV H L DK + L+HDDT
Sbjct: 176 QGVAWDPQNKYLATLSTDRYFRVYDVQTKRVVSRCHKCVLPVPKEHPLRDKTIRLYHDDT 235
Query: 298 MKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSV 357
+++FFRRL+FSPDG +++ PSG E + KP++ T++FTR L +P+ LPS Y+V
Sbjct: 236 LQTFFRRLSFSPDGNIIVTPSGMAE-IEGVSKPLNTTYIFTRNSLKQPSFTLPSPDQYTV 294
Query: 358 AVKCCPVLFELKPSDDK--PLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKL 415
AV+ CPV F+ +P + PL LPYR+V AVAT++++ LYDTQ A+PFA I+NIHYT+L
Sbjct: 295 AVRFCPVYFQHRPHAESKPPLVPLPYRMVFAVATKSSVYLYDTQQAAPFALISNIHYTRL 354
Query: 416 TDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPT 464
TD++WSSDG++LI SSTDG+CS+I F + E+G + PPS E S ++P+
Sbjct: 355 TDMSWSSDGRILIVSSTDGFCSMIFFSEGELGTIWEPPSPEASAADEPS 403
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345489109|ref|XP_001604267.2| PREDICTED: chromatin assembly factor 1 subunit B-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 263/614 (42%), Positives = 354/614 (57%), Gaps = 101/614 (16%)
Query: 1 MKCTIPEISWHNRDPVLSVDIQLKQEK----DNCYRIVTGGADSHVFDYLLKIPHRLKTG 56
MKCTIPEISWHNR PVLSVD+Q+ K + +R+ +GGADSHV
Sbjct: 13 MKCTIPEISWHNRGPVLSVDMQIGSSKTPSGEVFWRLASGGADSHVL------------- 59
Query: 57 KIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGI 116
IW++T E+G A V +DL RHQ+ VNVVRFSP+GE+LASGDD
Sbjct: 60 -IWHVTVNEAGEATVSCVADLERHQRTVNVVRFSPSGEMLASGDD--------------- 103
Query: 117 ANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEEN 176
ES II+WKQ+ ++P P ++
Sbjct: 104 ---------------------------------ESAIILWKQREGSEIPLLPGDDIQ--- 127
Query: 177 VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKK- 235
NKE W K+LRGH+EDVYD+SWSP S L+SGS+DN+ I+W+VHKGK + +L+++ K
Sbjct: 128 -NKEQWNSWKVLRGHVEDVYDLSWSPDSNCLVSGSLDNSVILWNVHKGKKIAMLSDYNKG 186
Query: 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHD 295
F QGV WDP N+++AT+SSDR R + +K+ + R +SK+P + H L KVV LF+D
Sbjct: 187 FPQGVTWDPTNKFIATISSDRICRLIDVTAKRTVQRVSKSKIPTPAGHPLEGKVVRLFYD 246
Query: 296 DTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYY 355
DT KSFFRRLTF+PDG LLI PSG +E +ST K + T +F+R L +P LPS
Sbjct: 247 DTFKSFFRRLTFTPDGSLLIVPSGIIEPQESTDKVTNCTVIFSRHNLKEPVAILPSFDEV 306
Query: 356 SVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKL 415
+ AV+CCPV F+++ P+ LPYRIV AVAT+N++++YDTQ SP A I+NIHYT+L
Sbjct: 307 TNAVRCCPVYFKIREDGPAPMVALPYRIVFAVATDNSVIIYDTQQISPVAVISNIHYTRL 366
Query: 416 TDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKEND----PTKGEPVRS 471
TDITWSSDGKVL+ASS+DGYCSII F + E+G Y P + +K N+ PT P
Sbjct: 367 TDITWSSDGKVLVASSSDGYCSIIHFQEGELGKVYKMPPQKVTKSNNVKEAPTTPAPFIE 426
Query: 472 ED---------KPRSAEQAKGEGK----VLGEKQTGNKVSPTDKSSEDTQKISVKNEKGS 518
D K +SA +A + + + +K NK + +S + + + V+ E S
Sbjct: 427 LDVNAVDIDISKSKSAVKANEDKQKTEDINKQKTQENKNIGENINSVEDKPVRVETESNS 486
Query: 519 NSQVVEAVTSDIKESKDNNTPAEAMEVDPVPPETNAECPSTPKTHGGTPNKGGTPSKTPR 578
N +D E++D E V+ P A P T K P + ++TPR
Sbjct: 487 N--------TDPDETEDFQLVLEDTVVESEKPNIKATPPKTEK-----PPAIISSARTPR 533
Query: 579 RVQLITLSSPNRKR 592
RVQLITLSSP R +
Sbjct: 534 RVQLITLSSPKRTK 547
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|312374653|gb|EFR22163.1| hypothetical protein AND_15691 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/466 (49%), Positives = 309/466 (66%), Gaps = 64/466 (13%)
Query: 1 MKCTIPEISWHNRDPVLSVDIQLK----QEKDNCYRIVTGGADSHVFDYLLKIPHRLKTG 56
MKC IPEISWHNRDPVL VDIQ K +E+D +R+ +GG DSHV L+ IP
Sbjct: 246 MKCQIPEISWHNRDPVLCVDIQPKGPNDRERDQ-HRLASGGTDSHV---LVSIP------ 295
Query: 57 KIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTER-ESG 115
G K IWY+ + E G
Sbjct: 296 -----------------------------------------GGGGSEKMIWYMVQNPECG 314
Query: 116 IANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL----PEFPSSN 171
++ A+DL+RHQ+AVN VR+SP+GELLASGDDES I++WKQK D ++ ++
Sbjct: 315 TITLDLAADLTRHQRAVNAVRWSPSGELLASGDDESVIMIWKQKGDTEVVNIVGKYCERV 374
Query: 172 LDEEN-VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230
+D N +KE W+ K+LRGH+EDVYD+SWSP S L+SGSVDNTA++WDV +GK+ IL
Sbjct: 375 IDTTNDQDKEIWLTMKVLRGHMEDVYDLSWSPNSQFLVSGSVDNTAMVWDVMRGKSQAIL 434
Query: 231 TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVV 290
+HK FVQGVAWDPK++Y+ATL +DR R + IQSK+V+SR+ + LPV + H L K +
Sbjct: 435 HDHKGFVQGVAWDPKDKYLATLCTDRVFRVFDIQSKRVVSRSNKCTLPVPAVHPLHGKTI 494
Query: 291 PLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLP 350
LFHDDT+++FFRRL+FSPDG L++ PSG E + KP++ T+++TR L +PA+ LP
Sbjct: 495 RLFHDDTLQTFFRRLSFSPDGNLIVTPSGVAE-IEGVPKPLNTTYIYTRNSLRQPAITLP 553
Query: 351 SLQYYSVAVKCCPVLFELKPSDDK--PLFKLPYRIVIAVATENNILLYDTQHASPFAFIA 408
S Y+VAV+ CPV FE + D + P+ LPYR+V AVAT++++ LYDTQ +PFA I+
Sbjct: 554 SPDQYTVAVRFCPVFFEHRAHDVEKPPIIPLPYRMVFAVATKSSVYLYDTQQPAPFALIS 613
Query: 409 NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPS 454
NIHYT+LTD+ WSSDGK+LI SSTDGYCS+I F D E+G+ YVPP+
Sbjct: 614 NIHYTRLTDMAWSSDGKILIVSSTDGYCSLIHFNDGELGVAYVPPA 659
|
Source: Anopheles darlingi Species: Anopheles darlingi Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195425417|ref|XP_002061005.1| GK10714 [Drosophila willistoni] gi|194157090|gb|EDW71991.1| GK10714 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/457 (48%), Positives = 302/457 (66%), Gaps = 61/457 (13%)
Query: 1 MKCTIPEISWHNRDPVLSVDIQLK----QEKDNCYRIVTGGADSHVFDYLLKIPHRLKTG 56
MKC IPEISWHNRDPVLSVDIQ K Q C R+ +GG D+HV
Sbjct: 1 MKCKIPEISWHNRDPVLSVDIQYKGTGLQSSTIC-RLASGGTDAHVL------------- 46
Query: 57 KIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGI 116
IWYL R+ G G+ + SG D G
Sbjct: 47 -IWYLNRRKGG------------------------EGDAVDSGGD-------------GD 68
Query: 117 ANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEEN 176
+E A+DLSRHQ+AVN VR+SPNGELLASGDDES + +WKQK + ++ ++ +
Sbjct: 69 VGLELAADLSRHQRAVNTVRWSPNGELLASGDDESVVFIWKQKAEHEVINIVDAD-GHGS 127
Query: 177 VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF 236
+KE W+ K+LRGH ED+YD+SWSP S L++GSVDNTA+MWDVHKGK+L IL +HK +
Sbjct: 128 QDKEVWLTLKVLRGHREDIYDLSWSPNSLFLVTGSVDNTAMMWDVHKGKSLAILDDHKGY 187
Query: 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDD 296
VQGVAWDP NQY+AT+S+DR LR + +K++I R +S LPV +HE+ +K V L+HD
Sbjct: 188 VQGVAWDPCNQYIATMSTDRHLRIFDANTKRIIHRVSKSTLPVKENHEMHEKSVRLYHDG 247
Query: 297 TMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYS 356
T+++FFRRL+F+PDG+LLI P+G + + D KP + + F+R L++PA LP + Y+
Sbjct: 248 TLQTFFRRLSFTPDGKLLITPAG-ITDYDGVLKPTNTAYGFSRYDLSRPAYVLPFPKEYA 306
Query: 357 VAVKCCPVLFELKPSDDK---PLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYT 413
VAV+C PVL+ L+P +++ P+ KLPYR++ AVAT+N++L YDTQ PF ++NIHYT
Sbjct: 307 VAVRCSPVLYRLRPYNEEKNPPIIKLPYRMIYAVATKNSVLFYDTQQQVPFGIVSNIHYT 366
Query: 414 KLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY 450
+LTD+TWS+DG VLI SSTDG+CS+++F +E+G Y
Sbjct: 367 RLTDLTWSADGNVLIVSSTDGFCSLLTFEADELGERY 403
|
Source: Drosophila willistoni Species: Drosophila willistoni Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170051150|ref|XP_001861634.1| chromatin assembly factor 1 subunit B [Culex quinquefasciatus] gi|167872511|gb|EDS35894.1| chromatin assembly factor 1 subunit B [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/451 (49%), Positives = 298/451 (66%), Gaps = 61/451 (13%)
Query: 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWY 60
MKC IPEISWHNRDPVLSVD
Sbjct: 1 MKCQIPEISWHNRDPVLSVD---------------------------------------- 20
Query: 61 LTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTER-ESGIANV 119
+ ++ G +N ++D ++ L + G D IW++T+ E G ++
Sbjct: 21 IQPKQVGSSNNSSSADKIDFRR------------LASGGTDSHVLIWHMTQNAECGTISL 68
Query: 120 EFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEEN-VN 178
+ A+DL+RHQ+AVN VR+SPNGELLASGDDES I +WKQK + ++ LD N +
Sbjct: 69 DLAADLTRHQRAVNAVRWSPNGELLASGDDESVIFIWKQKGETEVVNI----LDTTNEQD 124
Query: 179 KEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ 238
KE W+ KILRGH+EDVYD+ WSP S L SGSVDNTA++WDV KGK+ I ++HK FVQ
Sbjct: 125 KETWLTMKILRGHMEDVYDLCWSPNSMFLSSGSVDNTAMVWDVTKGKSQHIFSDHKGFVQ 184
Query: 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298
GVAWDPKNQY+ATLS+DR R + +Q+KKV++R + LPV H L K V L+HDDT+
Sbjct: 185 GVAWDPKNQYLATLSTDRYFRVFDLQTKKVVTRNNKCGLPVPKGHALHGKTVRLYHDDTL 244
Query: 299 KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVA 358
++FFRRLTFSPDG L++ PSG E + KP++ T+V+TR L +PA+ LPS Y+VA
Sbjct: 245 QTFFRRLTFSPDGNLIVTPSGVAE-IEGVPKPLNTTYVYTRNSLKQPAMTLPSPDQYTVA 303
Query: 359 VKCCPVLFELKP-SDDK-PLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLT 416
V+ CP+ F+L+P +DDK P+ LPYR++ AVAT++++ LYDTQ +PFA I+NIHYT+LT
Sbjct: 304 VRFCPLYFKLRPHADDKPPVIPLPYRMIFAVATKSSVYLYDTQQKTPFALISNIHYTRLT 363
Query: 417 DITWSSDGKVLIASSTDGYCSIISFGDNEIG 447
DI+WSSDGK+LI SSTDG+CS+ISF D E+G
Sbjct: 364 DISWSSDGKILIVSSTDGFCSLISFNDGELG 394
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328777669|ref|XP_624307.2| PREDICTED: chromatin assembly factor 1 subunit B [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/515 (46%), Positives = 326/515 (63%), Gaps = 31/515 (6%)
Query: 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154
++ G D IW+LT E+G A V+ +DL RHQ+AVNVVRFSP+ +LASGDDESTI+
Sbjct: 37 IVTGGADSHILIWHLTMNENGGAIVKCVADLERHQRAVNVVRFSPSKNILASGDDESTIV 96
Query: 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214
+WKQK D + F +S EE +KE WI K+LRGHLEDVYDISWSP S L+SGSVDN
Sbjct: 97 LWKQKEDCEF--FITS---EETKDKEQWISWKVLRGHLEDVYDISWSPNSNMLVSGSVDN 151
Query: 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACR 274
TAI+WD+HKG+++ IL++HK FVQGV+WDP NQY+ T+S+DR R I +KK + R +
Sbjct: 152 TAILWDIHKGRSVAILSDHKGFVQGVSWDPCNQYICTISTDRICRLIDINTKKTVQRIYK 211
Query: 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334
+K+P + H + DK+V LF+DDT KSFFRRLTFS DG LLI PSG +E +++ + + T
Sbjct: 212 AKIPTRADHPIKDKIVRLFYDDTFKSFFRRLTFSIDGSLLIVPSGIIEPIETSERVSNTT 271
Query: 335 HVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNIL 394
+F+R L +P + LPSL ++AV+CCP+ FEL+ P+ LPYR+V AVAT+++I+
Sbjct: 272 LIFSRHNLKEPLILLPSLDECTIAVRCCPLYFELQNDGPTPVIALPYRMVFAVATQHSIM 331
Query: 395 LYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPS 454
+YDTQ SP A I+NIHYT+LTD+ WS DG++LIASSTDGYCSII F E+G Y
Sbjct: 332 IYDTQQISPIAVISNIHYTRLTDVAWSDDGRILIASSTDGYCSIIHFQKGELGQEY---- 387
Query: 455 GEESKEND-PTKGEPVRSEDKPRSAEQAKGEGKVLGEKQTGNKVSPTDKSSEDTQ-KISV 512
K++D P K + + + K + + K + EK + D S+ D K +
Sbjct: 388 ---KKQSDIPIKSDSINNNFKQFTT--SSFNIKNVSEKSATT--ADIDNSAIDIDIKHEI 440
Query: 513 KNEKGSNSQVV-----EAVTSDIKESKDNNTPAEAMEVDPVP----PETNAECPSTPKTH 563
K NSQ + + + IK+ KD + E E + + E+ E +
Sbjct: 441 KKILNENSQNIINENNKLLNHTIKQKKDLDNKMEIEETEDIKLVYNEESTNEVIKVNISQ 500
Query: 564 GGTPNKGGT----PSKTPRRVQLITLSSPNRKRKQ 594
K PSKTPRRVQLITLSSP +K+
Sbjct: 501 KDISQKSEVPLIIPSKTPRRVQLITLSSPKGLKKE 535
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195153457|ref|XP_002017642.1| GL17201 [Drosophila persimilis] gi|194113438|gb|EDW35481.1| GL17201 [Drosophila persimilis] | Back alignment and taxonomy information |
|---|
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/532 (43%), Positives = 324/532 (60%), Gaps = 86/532 (16%)
Query: 1 MKCTIPEISWHNRDPVLSVDIQLKQEK---DNCYRIVTGGADSHVFDYLLKIPHRLKTGK 57
MKC IPEISWHNRDPVLSVDIQ+ ++ R+ +GG D+HV
Sbjct: 1 MKCKIPEISWHNRDPVLSVDIQMNGQRLRSPTICRLASGGTDAHVL-------------- 46
Query: 58 IWYLTERESGIA-NVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGI 116
IWY+ E+G ++E A DLSRHQ+AVN VR+SPNGELLASGDD
Sbjct: 47 IWYVNRCENGDGVDLELAVDLSRHQRAVNTVRWSPNGELLASGDD--------------- 91
Query: 117 ANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEEN 176
ES + +WKQK D ++ ++ +
Sbjct: 92 ---------------------------------ESVVFIWKQKADHEVVNILDADGSSDQ 118
Query: 177 VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF 236
+KE W+ K+LRGH ED+YD+SW+P S L++GSVDNTA++WDV+KGK+L IL +HK +
Sbjct: 119 -DKESWVTMKVLRGHREDIYDLSWAPNSLFLVTGSVDNTAMVWDVYKGKSLAILEDHKGY 177
Query: 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDD 296
VQGVAWDP NQ++AT+S+DR LR + +K+V+ R + LPV HE+ + + L+HD
Sbjct: 178 VQGVAWDPCNQFIATMSTDRQLRIFDAHTKRVLHRVAKCTLPVKEGHEMHGRNIRLYHDG 237
Query: 297 TMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYS 356
++++FFRRL F+PDG+LLI P+G + + D KPI+ T+ F+R L +PA LP Q Y+
Sbjct: 238 SLQTFFRRLCFTPDGKLLITPAG-ITDYDGVLKPINTTYGFSRYDLARPAFVLPFPQEYA 296
Query: 357 VAVKCCPVLFELKPSD---DKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYT 413
VAV+C PVL+ L+P + + P+ LPYR++ AVAT+N++ LYDTQ PFA ++NIHYT
Sbjct: 297 VAVRCSPVLYRLRPYNADKNPPVISLPYRMIYAVATKNSVFLYDTQQPVPFAIVSNIHYT 356
Query: 414 KLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY-----VPPSGEESKENDPTKGEP 468
+LTD+TWS DG VLI SSTDG+CS+++F +E+G Y V + +S EN P P
Sbjct: 357 RLTDLTWSGDGTVLIISSTDGFCSLLNFEIDELGERYEEMDAVLCAALKSSENAP----P 412
Query: 469 VRSEDKPR----SAEQAKGEGKVLGEKQTGNKVSPTDKSS-EDTQKISVKNE 515
++ + KPR SA++ K L EK N+ T +S +D ++I + E
Sbjct: 413 LKKK-KPRARKVSADERPATRKPLQEKTKTNRNRKTPESDLQDVREIEIDAE 463
|
Source: Drosophila persimilis Species: Drosophila persimilis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|198460559|ref|XP_001361754.2| GA11885 [Drosophila pseudoobscura pseudoobscura] gi|198137058|gb|EAL26333.2| GA11885 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/532 (43%), Positives = 324/532 (60%), Gaps = 86/532 (16%)
Query: 1 MKCTIPEISWHNRDPVLSVDIQLKQEK---DNCYRIVTGGADSHVFDYLLKIPHRLKTGK 57
MKC IPEISWHNRDPVLSVDIQ+ ++ R+ +GG D+HV
Sbjct: 1 MKCKIPEISWHNRDPVLSVDIQMNGQRLRSPTICRLASGGTDAHVL-------------- 46
Query: 58 IWYLTERESGIA-NVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGI 116
IWY+ E+G ++E A DLSRHQ+AVN VR+SPNGELLASGDD
Sbjct: 47 IWYVNRCENGDGVDLELAVDLSRHQRAVNTVRWSPNGELLASGDD--------------- 91
Query: 117 ANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEEN 176
ES + +WKQK D ++ ++ +
Sbjct: 92 ---------------------------------ESVVFIWKQKADHEVVNILDADGSSDQ 118
Query: 177 VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF 236
+KE W+ K+LRGH ED+YD+SW+P S L++GSVDNTA++WDV+KGK+L IL +HK +
Sbjct: 119 -DKESWVTMKVLRGHREDIYDLSWAPNSLFLVTGSVDNTAMVWDVYKGKSLAILEDHKGY 177
Query: 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDD 296
VQGVAWDP NQ++AT+S+DR LR + +K+V+ R + LPV HE+ + + L+HD
Sbjct: 178 VQGVAWDPCNQFIATMSTDRQLRIFDAHTKRVLHRVAKCTLPVKEGHEMHGRNIRLYHDG 237
Query: 297 TMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYS 356
++++FFRRL F+PDG+LLI P+G + + D KPI+ T+ F+R L +PA LP Q Y+
Sbjct: 238 SLQTFFRRLCFTPDGKLLITPAG-ITDYDGVLKPINTTYGFSRYDLARPAFVLPFPQEYA 296
Query: 357 VAVKCCPVLFELKPSD---DKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYT 413
VAV+C PVL+ L+P + + P+ LPYR++ AVAT+N++ LYDTQ PFA ++NIHYT
Sbjct: 297 VAVRCSPVLYRLRPYNADKNPPVISLPYRMIYAVATKNSVFLYDTQQPVPFAIVSNIHYT 356
Query: 414 KLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY-----VPPSGEESKENDPTKGEP 468
+LTD+TWS DG VLI SSTDG+CS+++F +E+G Y V + +S EN P P
Sbjct: 357 RLTDLTWSGDGTVLIISSTDGFCSLLNFEIDELGERYEEMDAVLCAALKSSENAP----P 412
Query: 469 VRSEDKPR----SAEQAKGEGKVLGEKQTGNKVSPTDKSS-EDTQKISVKNE 515
++ + KPR SA++ K L EK N+ T +S +D ++I + E
Sbjct: 413 LKKK-KPRARKVSADERPATRKPLQEKTKTNRNRKTPESDIQDVREIEIDAE 463
|
Source: Drosophila pseudoobscura pseudoobscura Species: Drosophila pseudoobscura Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380015527|ref|XP_003691752.1| PREDICTED: chromatin assembly factor 1 subunit B-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/515 (46%), Positives = 324/515 (62%), Gaps = 31/515 (6%)
Query: 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154
++ G D IW+LT E+G A V+ +DL RHQ+AVNVVRFSP+ +LASGDDESTI+
Sbjct: 37 VVTGGADSHILIWHLTMNENGGAIVKCVADLERHQRAVNVVRFSPSKSILASGDDESTIV 96
Query: 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214
+WKQK D + F +S EE +KE WI K+LRGHLEDVYDISWSP S L+SGSVDN
Sbjct: 97 LWKQKEDCEF--FITS---EETKDKEQWISWKVLRGHLEDVYDISWSPNSNMLVSGSVDN 151
Query: 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACR 274
TAI+WD+HKG+++ IL++HK FVQGV+WDP NQY+ T+S+DR R I +KK + R +
Sbjct: 152 TAILWDIHKGRSVAILSDHKGFVQGVSWDPCNQYICTISTDRICRLIDINTKKTVQRIYK 211
Query: 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334
+K+P + H + DK+V LF+DDT KSFFRRLTFS DG LLI PSG +E +++ + + T
Sbjct: 212 AKIPTRADHPIKDKIVRLFYDDTFKSFFRRLTFSIDGLLLIVPSGIIEPIETSERISNTT 271
Query: 335 HVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNIL 394
+F+R L +P V LPSL ++AV+CCP+ FEL+ + P+ LPYR+V AVAT+++I+
Sbjct: 272 LIFSRHNLKEPLVLLPSLDECTIAVRCCPLYFELQKNGPTPIIALPYRMVFAVATQHSIM 331
Query: 395 LYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPS 454
+YDTQ SP A I+NIHYT+LTDI WS DG++LIASSTDGYCSII F E+G Y
Sbjct: 332 IYDTQQISPIAVISNIHYTRLTDIAWSDDGRILIASSTDGYCSIIHFQKGELGQEY---- 387
Query: 455 GEESKEND-PTKGEPVRSEDKPRSAEQAKGEGKVLGEKQTGNKVSPTDKSSEDTQ-KISV 512
K++D P K + + + K S + K + EK T D S+ D K +
Sbjct: 388 ---KKQSDIPIKSDSINNNFKQFST--SNFNIKNVSEKPTTT--VDIDNSAIDIDIKHEI 440
Query: 513 KNEKGSNSQ-------VVEAVTSDIKESKDNNTPAEAMEVDPVPPETNAECPS--TPKTH 563
K NSQ + + K+ +D + E E + + N E + +
Sbjct: 441 KKILNENSQNINEINENNKLLNHTTKQKRDLDNKMEIEETEDIKLVYNEESTNEVVKENI 500
Query: 564 GGTPNKGGT----PSKTPRRVQLITLSSPNRKRKQ 594
K PSK PRRVQLITLSSP +K+
Sbjct: 501 KDISQKSEVPLIIPSKIPRRVQLITLSSPKGLKKE 535
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 621 | ||||||
| FB|FBgn0033526 | 747 | Caf1-105 "Caf1-105" [Drosophil | 0.800 | 0.665 | 0.426 | 4.7e-103 | |
| UNIPROTKB|Q13112 | 559 | CHAF1B "Chromatin assembly fac | 0.829 | 0.921 | 0.406 | 5.8e-98 | |
| UNIPROTKB|A5D9H4 | 575 | CHAF1B "Chromatin assembly fac | 0.755 | 0.815 | 0.419 | 3e-94 | |
| UNIPROTKB|F1SGX1 | 559 | CHAF1B "Uncharacterized protei | 0.826 | 0.917 | 0.402 | 3e-94 | |
| RGD|1307634 | 572 | Chaf1b "chromatin assembly fac | 0.814 | 0.884 | 0.398 | 3.8e-94 | |
| MGI|MGI:1314881 | 572 | Chaf1b "chromatin assembly fac | 0.824 | 0.895 | 0.398 | 6.1e-94 | |
| UNIPROTKB|Q5R1S9 | 566 | CHAF1B "Chromatin assembly fac | 0.706 | 0.775 | 0.428 | 1.3e-93 | |
| UNIPROTKB|F1P2D7 | 566 | CHAF1B "Chromatin assembly fac | 0.706 | 0.775 | 0.428 | 1.3e-93 | |
| ZFIN|ZDB-GENE-040426-1947 | 613 | chaf1b "chromatin assembly fac | 0.813 | 0.823 | 0.388 | 3e-92 | |
| TAIR|locus:2174784 | 487 | FAS2 "AT5G64630" [Arabidopsis | 0.663 | 0.845 | 0.402 | 1.7e-82 |
| FB|FBgn0033526 Caf1-105 "Caf1-105" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 225/528 (42%), Positives = 323/528 (61%)
Query: 95 LLASGDDVGKEIWYLTERES--GIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152
L + G D IWY+ + G+ +VE A+DLSRHQ+AVN VR+SPNGELLASGDDES
Sbjct: 36 LASGGSDAHVLIWYVNRSDDAEGV-DVELAADLSRHQRAVNAVRWSPNGELLASGDDESV 94
Query: 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV 212
+ +WKQK D ++ ++ E +KE W+ K+LRGH ED+YD+SW+P S L+SGSV
Sbjct: 95 VFIWKQKADHEVVNIVDADGCSEQ-DKEVWLTLKVLRGHREDIYDLSWAPNSQFLVSGSV 153
Query: 213 DNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRA 272
DNTA++WDVH GK+L IL +HK +VQGVAWDP NQY+AT+S+DR +R + +K+V+ R
Sbjct: 154 DNTAMLWDVHSGKSLAILDDHKGYVQGVAWDPCNQYIATMSTDRQMRIFDANTKRVLHRV 213
Query: 273 CRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPIS 332
+ LPV HE+ K + L+ D T+++FFRRL F+PDG+LL+ PSG + + D KPI+
Sbjct: 214 SKCVLPVKEDHEMHGKSMRLYQDGTLQTFFRRLCFTPDGKLLLTPSG-ITDYDGVVKPIN 272
Query: 333 VTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSD---DKPLFKLPYRIVIAVAT 389
++ F+R L+KPA LP + Y+VAV+C PVL+ L+P + + P+ LPYR++ AVAT
Sbjct: 273 TSYGFSRHDLSKPAFVLPFPKEYAVAVRCSPVLYRLRPYNAEKNPPIISLPYRMIYAVAT 332
Query: 390 ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIP 449
+N + YDTQ PFA ++NIHY++LTD+ WSSDG VLI SSTDGYCS+I+F E+G
Sbjct: 333 KNAVFFYDTQQPVPFAIVSNIHYSRLTDLAWSSDGTVLIVSSTDGYCSLITFEPTELGDC 392
Query: 450 Y-----VPPSGEESKENDPT---KGEPVR--SEDKPRSAEQAKGEGKVLGE-KQTG-NKV 497
Y V +S EN K + +R S D+PR Q K + + + G +V
Sbjct: 393 YEDMETVLSVVLKSSENATVLKKKRQKLRKVSLDEPRKPLQEKSKPNTIRRASEAGITEV 452
Query: 498 SPTDKSSE-DTQKISVKNEKGSNSQVVEAVTSDIKESKDNNTPAEAMEVDPVPPETNAEC 556
+ +E D+ SV + K +NS +A +E K TP A+ P T A
Sbjct: 453 GEPELDAENDSSTHSVSSNK-TNSPKTKAS----EEEKP--TPI-AIRRSPRKNST-APM 503
Query: 557 PSTPKTHGGTP-NKGGTPSKTPRRVQLITLSSPNRKRKQDEEKIRETI 603
P + P +KG + S P+ +T + + +K ++ +
Sbjct: 504 PIAIRRAPRKPEDKGNSESSKPKDEMEVTHTKTTQVQKTVASPVKRKV 551
|
|
| UNIPROTKB|Q13112 CHAF1B "Chromatin assembly factor 1 subunit B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 216/532 (40%), Positives = 304/532 (57%)
Query: 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154
L ++G D IW + + G A VEF S+L+RH KAVNVVRFSP GE+LASG D++ I+
Sbjct: 32 LASAGVDTNVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVIL 91
Query: 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214
+WK +++ + + DE +NKE+W V K LRGHLEDVYDI W+ + S SVDN
Sbjct: 92 LWKVNDNKEPEQIAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLMASASVDN 151
Query: 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACR 274
TAI+WDV KG+ + I EHK +VQGV WDP QYVATLS DR LR YSIQ K+V +
Sbjct: 152 TAIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRVLRVYSIQKKRVAFNVSK 211
Query: 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334
+ + E + +FHDD+MKSFFRRL+F+PDG LL+ P+GC+E+ ++ ++ T
Sbjct: 212 MLSGIGAEGEA--RSYRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCVESGENV---MNTT 266
Query: 335 HVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDK--PLFKLPYRIVIAVATENN 392
+VF+R L +P LP ++AV+CCPV FEL+P + L LPYR+V AVA+E++
Sbjct: 267 YVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFELRPVVETGVELMSLPYRLVFAVASEDS 326
Query: 393 ILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP 452
+LLYDTQ + PF +++NIHY L+DI+WSSDG L SSTDGYCS ++F +E+GIP
Sbjct: 327 VLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDELGIPLKE 386
Query: 453 PSGEESKENDPTKGEPVRSEDKPRSAEQAKG-EGKVLGEKQTGNKVSPTDKSSEDTQKIS 511
+ D K +S+ S+ + EG Q + T + +
Sbjct: 387 KPVLNMRTPDTAK--KTKSQTHRGSSPGPRPVEGTPASRTQDPSSPGTTPPQARQAPAPT 444
Query: 512 VKNEKGSNSQVVEAVTSDIKESKDNNTPAEAMEVDP---VPPET-NAECPSTPKTHGGTP 567
V + S + V++ E K ++ + P V T A +TP+ TP
Sbjct: 445 VIRDPPSITPAVKSPLPGPSEEKTLQPSSQNTKAHPSRRVTLNTLQAWSKTTPRRINLTP 504
Query: 568 NKGGTPSKTPRRVQLITLSSPNRKRKQDEEKIRETIKENDAKKACLDEKEGG 619
K TP P V +S+P+ + Q E + K+ LDE +GG
Sbjct: 505 LKTDTP---PSSVPTSVISTPSTEEIQSETPGDAQGSPPELKRPRLDENKGG 553
|
|
| UNIPROTKB|A5D9H4 CHAF1B "Chromatin assembly factor 1 subunit B" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 215/513 (41%), Positives = 297/513 (57%)
Query: 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154
L ++G D +W + + G A VEF S+L+RH KAVNVVRFSPNGE+LASG D++ I+
Sbjct: 32 LASAGVDTAVRVWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPNGEILASGGDDAVIL 91
Query: 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214
+WK +++ + + DE +NKE+W V K LRGHLEDVYDI W+ + S SVDN
Sbjct: 92 LWKVNDNKEPEQVAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLMASASVDN 151
Query: 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACR 274
TAIMWDV KG+ + I EHK +VQGV WDP QYVATLS DR LR YS Q K+V +
Sbjct: 152 TAIMWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRILRVYSTQKKRVAFNVSK 211
Query: 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334
V + E + +FHDD+MKSFFRRL+F+PDG LL+ P+GC+E+ ++ + T
Sbjct: 212 MLSGVGAEGEA--RSYRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCVESGENVT---NTT 266
Query: 335 HVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKP-------SDD-----KP---LFKL 379
+VF+R L +P LP ++AV+CCPV FEL+P SD +P L L
Sbjct: 267 YVFSRKNLKRPIAHLPCPAKATLAVRCCPVYFELRPVAEAGVLSDQGREGREPGMELVSL 326
Query: 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSII 439
PYR+V AVA+E+++LLYDTQ PF +++NIHY L+DI+WSSDG L SSTDGYCS +
Sbjct: 327 PYRLVFAVASEDSVLLYDTQQLFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFV 386
Query: 440 SFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGE---GKVLGEKQTGNK 496
+F +E+GIP K +PV S P +A++ KG+ G G + +
Sbjct: 387 TFEKDELGIPL--------------KEKPVLSLRTPDTAKKTKGQTPSGSSPGPRL--GE 430
Query: 497 VSPTDKSSEDTQKISVKNEKGSNSQVVEAVT-SDIKESKDNNTPAEAMEVDPVPPE-TNA 554
+PT + +D S + SQ A + + +PA + P+ P NA
Sbjct: 431 GTPTGRV-QDPSSPSTTPPQAKQSQAPPAAKDTPMAALGARGSPAGPPKEKPLQPSGQNA 489
Query: 555 ECPSTPKTHGGTPNKGGTPSKTPRRVQLITLSS 587
+ + + T P T RR+ LI L +
Sbjct: 490 KAQPSRRVTLNTLQAWSKP--TSRRINLIPLKT 520
|
|
| UNIPROTKB|F1SGX1 CHAF1B "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 216/537 (40%), Positives = 300/537 (55%)
Query: 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154
L ++G D IW + + G A VEF S+L+RH KAVNVVRFSPNGE+LASG D++ I+
Sbjct: 32 LASAGVDTTVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPNGEILASGGDDAVIL 91
Query: 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214
+WK +++ + + DE +NKE+W V K LRGHLEDVYDI W+ + S SVDN
Sbjct: 92 LWKVNDNKEPEQIAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWAADGNVMASASVDN 151
Query: 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACR 274
TAI+WDV KG+ + I EHK +VQGV WDP QYVATLS DR LR YS Q K+V +
Sbjct: 152 TAIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRILRVYSTQKKRVAFNVSK 211
Query: 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334
V + E + +FHDD+MKSFFRRL+F+PDG LL+ P+GC+E+ ++ + T
Sbjct: 212 MLSGVGAEGEA--RSYRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCVESGENVT---NTT 266
Query: 335 HVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPS-DDKP---LFKLPYRIVIAVATE 390
+VF+R L +P LP ++AV+CCPV F L+P+ + +P L LPYR+V AVA+E
Sbjct: 267 YVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFALRPAVEAEPSVELVSLPYRLVFAVASE 326
Query: 391 NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY 450
+++LLYDTQ PF +++NIHY L+DI+WSSDG L SSTDGYCS ++F +E+GIP
Sbjct: 327 DSVLLYDTQQLFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDELGIPL 386
Query: 451 VPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGKVLGEKQTGNKVSPTDKSSEDTQKI 510
+ D K +++ P EG Q + S T + Q +
Sbjct: 387 KEKPVLSVRTPDTAKKTKSQTQSLPGPRLV---EGTPTSRAQDPSSPSATPPPGK--QSL 441
Query: 511 SVKNEKGSNSQVVEAVTSDIKESKDNNTPAEAMEVDPVPPET------NAECPSTPKTHG 564
+ K + + A S++ A + V PP A STP+
Sbjct: 442 APAAAKDTPAATPAARGFWAAPSEEKTLQASSQNVKGHPPRRVTLNTLQAWSKSTPRRIN 501
Query: 565 GTPNKGGTPSKTPRRVQLITLSSPNRKRKQDEEKIRETIKENDAKKACLDE-KEGGK 620
P K +P P + SSP+ + Q E + K+ L E KEG +
Sbjct: 502 LIPLKTDSP---PNSIPTPLASSPSTEEIQSEVPGDPQGSPLELKRPRLSEPKEGSQ 555
|
|
| RGD|1307634 Chaf1b "chromatin assembly factor 1, subunit B (p60)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 217/545 (39%), Positives = 308/545 (56%)
Query: 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154
L ++G D IW + + G A VEF S+L+RH KAVNVVRFSP GE+LASG D++ I+
Sbjct: 32 LASAGVDTAVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVIL 91
Query: 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214
+WK ++ + + DE +NKE+W V K LRGHLEDVYDI W+ + S SVDN
Sbjct: 92 LWKMNDSKEPEQIAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWATDGNMMASASVDN 151
Query: 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACR 274
T I+WDV KG+ + I EHK +VQGV WDP QY+ATLS DR LR YS Q K+V
Sbjct: 152 TVIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYIATLSCDRVLRVYSTQKKRVAFNV-- 209
Query: 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334
SK+ E + +FHDD+MKSFFRRL+F+PDG LL+ P+GC+E+ ++ + T
Sbjct: 210 SKMLSGQGPEGEARSFRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCMESGENVT---NTT 266
Query: 335 HVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKP------SDDKP---LFKLPYRIVI 385
+VF+R L +P LP ++AV+CCPV FEL+P + ++P L LPYR+V
Sbjct: 267 YVFSREHLKRPIAHLPCPGKATLAVRCCPVYFELRPVAETEKASEEPSPELVSLPYRMVF 326
Query: 386 AVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445
AVA+E+++LLYDTQ + PF +++NIHY L+DI+WSSDG L SSTDGYCS ++F E
Sbjct: 327 AVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAFLAVSSTDGYCSFVTFEKGE 386
Query: 446 IGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGKVLGEKQT----GNKV---- 497
+G+P KE P G VR+ D + + +G G + N++
Sbjct: 387 LGVPL--------KEK-PVLG--VRTPDTAKKTKNQNPQGSSPGSRSAEGTPSNRIQDPS 435
Query: 498 SPTDKSSEDTQKISVKNEKGSNSQVVEAVTSDIKESKDNNTPAEAMEVDPVPPETNAECP 557
SP S TQ + K S S + A S + + T A + + P+
Sbjct: 436 SPCTTPSPTTQSPAPPAIKDSPS-AIPAGKSPLPRPSEEKTLQPAAQ-NMKAPQPRRVTL 493
Query: 558 STPKTHGGT-PNKGG-TPSKTPRRVQLITLS--SPNRKRKQDEEKIRETIKENDAKKACL 613
+T ++ G T P + TP + + S +P+ + Q E + + K+ L
Sbjct: 494 NTLQSWGKTAPRRINLTPLRADTAPNPLPSSGAAPSTEEVQPEVPGEPQDEPPELKRPKL 553
Query: 614 DEKEG 618
+E+EG
Sbjct: 554 EEQEG 558
|
|
| MGI|MGI:1314881 Chaf1b "chromatin assembly factor 1, subunit B (p60)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 215/539 (39%), Positives = 308/539 (57%)
Query: 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154
L ++G D IW L G A VEF S+L+RH KAVNVVRFSP GE+LASG D++ I+
Sbjct: 32 LASAGVDTAVRIWKLERGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVIL 91
Query: 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214
+WK ++ + + +E +NKE+W V K LRGHLEDVYDI W+ + S SVDN
Sbjct: 92 LWKMNDSKEPEQIAFQDEEEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLMTSASVDN 151
Query: 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACR 274
T I+WDV KG+ + I EHK +VQGV WDP QY+ATLS DR LR Y+ Q K+V
Sbjct: 152 TVIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYIATLSCDRVLRIYNTQKKRVAFNI-- 209
Query: 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334
SK+ E + +FHDD+MKSFFRRL+F+PDG LL+ P+GC+E+ ++ + T
Sbjct: 210 SKMLSGQGPEGEARSFRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCMESGENVT---NTT 266
Query: 335 HVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKP------SDDKP---LFKLPYRIVI 385
+VF+R L +P LP ++AV+CCPV FEL+P + ++P L LPYR+V
Sbjct: 267 YVFSRKHLKRPIAHLPCPGKATLAVRCCPVYFELRPVAETEKASEEPSPELVNLPYRMVF 326
Query: 386 AVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445
AVA+E+++LLYDTQ + PF +++NIHY L+DI+WSSDG L SSTDGYC+ ++F E
Sbjct: 327 AVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCTFVTFEKGE 386
Query: 446 IGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGKVLG--EKQTGNKVSPTDKS 503
+GIP + D K +++++ + G V G +T + SP
Sbjct: 387 LGIPLKEKPVLSIRTPDTAK----KAKNQTHQGS-SPGSRSVEGTPSNRTQDPSSPCTTP 441
Query: 504 SEDTQKISVKNEKGSNSQVVEAVTSDIKESKDNNTPAEAMEVDPVPPETNAECPSTPKTH 563
S TQ + K S S + A S + + + T A + + P+ +T +T
Sbjct: 442 SPTTQSPAPSAIKDSPS-AIPAGKSPLPQPSEEKTLQPAGQ-NMKAPQPRRVTLNTLQTW 499
Query: 564 GGT-PNKGG-TPSKTPR--RVQLITLSSPNRKRKQDEEKIRETIKENDAKKACLDEKEG 618
G T P + TP KT Q + ++P+ + Q E + + K+ L+E+EG
Sbjct: 500 GKTAPRRINLTPLKTDTVPNPQPNSGTAPSTEEVQPEAPGEPPEEPPELKRPRLEEREG 558
|
|
| UNIPROTKB|Q5R1S9 CHAF1B "Chromatin assembly factor 1 subunit B" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
Identities = 195/455 (42%), Positives = 279/455 (61%)
Query: 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154
L ++G D +W + + G A VEF S+L+RH KAVNVVRFSP+GE+LASG D++ I+
Sbjct: 32 LASAGVDTAVRVWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPSGEVLASGGDDAVIL 91
Query: 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214
+WK ++L + DE +NKE+W V K LRGHLEDVYDI W+ ++ S SVDN
Sbjct: 92 LWKLNDSKELEPLAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWTSDGNYMASASVDN 151
Query: 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACR 274
TAIMWDV KG+ + IL EHK +VQG+ WDP QY+ATLS DR LR Y+ Q+K+V
Sbjct: 152 TAIMWDVVKGQKVSILNEHKSYVQGITWDPLGQYIATLSCDRVLRVYNTQTKRVAFNV-- 209
Query: 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334
+K+P +S E + +FHDD+MKSFFRRL+F+PDG LL+ P+GC+E+ ++ + T
Sbjct: 210 TKMPSESGAEGEARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCVESGENVT---NTT 266
Query: 335 HVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDK--------P-LFKLPYRIVI 385
+VF+R L +P LP ++AV+CCPV FEL+ + +K P L LPYR+V
Sbjct: 267 YVFSRNNLKRPMGHLPCPGKATLAVRCCPVYFELRQALNKGEVSQKSSPALLNLPYRLVF 326
Query: 386 AVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445
AVA+E+++L YDT+ + PF +++NIHY L+DI+WSSDG L SSTDGYCS ++F +E
Sbjct: 327 AVASEDSVLFYDTEQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDE 386
Query: 446 IGIPYVPPSGEESKENDPTKGEPVRSE-DKPRSAEQAKGEGKVLGEKQTGNKVSPTDKSS 504
+GIP + + T+ + +S+ +K S EG L K
Sbjct: 387 LGIPLKEKPQIHVRTSVVTEKKVKKSQPNKVISPGSRLTEGTSLSTPTLQPKTPVAAAKD 446
Query: 505 EDTQKISVKNEKGSNSQVVEAVTSDIKESKDNNTP 539
+ + +KN S+S+ ++ +S N P
Sbjct: 447 LPSTPVGIKNVPVSSSEE-RKISQPASQSTKVNQP 480
|
|
| UNIPROTKB|F1P2D7 CHAF1B "Chromatin assembly factor 1 subunit B" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
Identities = 195/455 (42%), Positives = 279/455 (61%)
Query: 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154
L ++G D +W + + G A VEF S+L+RH KAVNVVRFSP+GE+LASG D++ I+
Sbjct: 32 LASAGVDTAVRVWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPSGEVLASGGDDAVIL 91
Query: 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214
+WK ++L + DE +NKE+W V K LRGHLEDVYDI W+ ++ S SVDN
Sbjct: 92 LWKLNDSKELEPLAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWTSDGNYMASASVDN 151
Query: 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACR 274
TAIMWDV KG+ + IL EHK +VQG+ WDP QY+ATLS DR LR Y+ Q+K+V
Sbjct: 152 TAIMWDVVKGQKVSILNEHKSYVQGITWDPLGQYIATLSCDRVLRVYNTQTKRVAFNV-- 209
Query: 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334
+K+P +S E + +FHDD+MKSFFRRL+F+PDG LL+ P+GC+E+ ++ + T
Sbjct: 210 TKMPSESGAEGEARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCVESGENVT---NTT 266
Query: 335 HVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDK--------P-LFKLPYRIVI 385
+VF+R L +P LP ++AV+CCPV FEL+ + +K P L LPYR+V
Sbjct: 267 YVFSRNNLKRPMGHLPCPGKATLAVRCCPVYFELRQALNKGEVSQKSSPALLNLPYRLVF 326
Query: 386 AVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445
AVA+E+++L YDT+ + PF +++NIHY L+DI+WSSDG L SSTDGYCS ++F +E
Sbjct: 327 AVASEDSVLFYDTEQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDE 386
Query: 446 IGIPYVPPSGEESKENDPTKGEPVRSE-DKPRSAEQAKGEGKVLGEKQTGNKVSPTDKSS 504
+GIP + + T+ + +S+ +K S EG L K
Sbjct: 387 LGIPLKEKPQIHVRTSVVTEKKVKKSQPNKVISPGSRLTEGTSLSTPTLQPKTPVAAAKD 446
Query: 505 EDTQKISVKNEKGSNSQVVEAVTSDIKESKDNNTP 539
+ + +KN S+S+ ++ +S N P
Sbjct: 447 LPSTPVGIKNVPVSSSEE-RKISQPASQSTKVNQP 480
|
|
| ZFIN|ZDB-GENE-040426-1947 chaf1b "chromatin assembly factor 1, subunit B" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 208/535 (38%), Positives = 297/535 (55%)
Query: 76 DLSRHQKA-VNVVRFSPNGE-----LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQ 129
+++ H K V + F +G+ L +G D +W + + G A VEF S+L+RH
Sbjct: 7 EIAWHNKEPVYSLDFQQSGDGKTQRLATAGVDTTVRMWRVDKGPDGKAVVEFLSNLARHT 66
Query: 130 KAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEE-NVNKEHWIVTKIL 188
KAVNVVRFSP E+LASG D++ I++WK +++ + P+ +E+ +NKE W V K L
Sbjct: 67 KAVNVVRFSPTAEVLASGGDDAAILLWKLNDNKEPEQTPTFQEEEDAQLNKESWSVVKTL 126
Query: 189 RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQY 248
RGH+EDVYDISW+ + SGSVDNTAIMWDV+KG+ + I +HK +VQGVAWDP QY
Sbjct: 127 RGHIEDVYDISWTSDGNFMASGSVDNTAIMWDVNKGQKMCIFNDHKSYVQGVAWDPLGQY 186
Query: 249 VATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308
++TLS DR +R YS ++K + + E+ K +FHDD+M+SFFRRLTF+
Sbjct: 187 ISTLSCDRVMRVYSAHNRKKAYSISKMTSSATADGEV--KNYRMFHDDSMRSFFRRLTFT 244
Query: 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFEL 368
PDG L+AP+GC+E ++ + T+VF+R +P LP ++AV+C PV FEL
Sbjct: 245 PDGSFLLAPAGCVEAGENVT---NTTYVFSRKSFKRPIAHLPCPSKATLAVRCSPVYFEL 301
Query: 369 KPS---DD--KPL---FKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITW 420
+ DD KP+ F LPYR+V AVA+E++I YDTQ PF +++NIHY L+D++W
Sbjct: 302 RTKRAEDDSLKPVANTFNLPYRLVFAVASEDSIFFYDTQQTLPFGYVSNIHYHTLSDLSW 361
Query: 421 SSDGKVLIASSTDGYCSIISFGDNEIGIPYV--PPSG--EESKENDPTKGEPVRSEDKPR 476
S DG L SSTDGYCS ISF + E+G P PP S N+ KG+ + +
Sbjct: 362 SRDGSFLAVSSTDGYCSFISFDEGELGTPLKEKPPLEMVTPSSTNEK-KGKRALANGRTA 420
Query: 477 SAEQAKGEGKVLGEKQTGNKVSPTDKSSEDTQKISVKNEKGSNSQVVEAVTSDIKESKDN 536
S + +K+ P +S T +S EK + Q ++ + + +
Sbjct: 421 SPVPRQANTPAAQDKEKEGSAGP---ASSKTSSVSGTEEKRT-PQALKTKAQPRRITLNT 476
Query: 537 NTPAEAMEVDPVPPETNAECPSTPKTHGGTPNKGGTPSKTPRRVQLITLSSPNRK 591
P ++ PSTPK+ TP P TP L N K
Sbjct: 477 LEGWGKPSTPKSPAAASSTAPSTPKSAPSTPGSSRAPL-TPHTAPSTPLGPLNSK 530
|
|
| TAIR|locus:2174784 FAS2 "AT5G64630" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 758 (271.9 bits), Expect = 1.7e-82, Sum P(3) = 1.7e-82
Identities = 181/450 (40%), Positives = 261/450 (58%)
Query: 77 LSRHQ-KAVNVVRFSPNGELLAS-GDDVGKEIWYLT--ERESGIANVEFASDLSRHQKAV 132
+S H K V V F P LLA+ G D ++W + + E + +V + S L+ H AV
Sbjct: 8 ISWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAV 67
Query: 133 NVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHL 192
N +RFSP+GELLASG D + +WK PS E N + W V K L H
Sbjct: 68 NTIRFSPSGELLASGADGGELFIWKLH--------PS----ETN---QSWKVHKSLSFHR 112
Query: 193 EDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATL 252
+DV D+ WSP +LISGSVDN+ I+WDV+KG IL H +VQGVAWDP +YVA+L
Sbjct: 113 KDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASL 172
Query: 253 SSDRSLRTYS----IQSKKV--ISRACRSKL-PVDSSHELFDKVVP--LFHDDTMKSFFR 303
SSDR+ R Y+ +SK V ++ C+ + D K + LFHD+T+ SFFR
Sbjct: 173 SSDRTCRIYANKPQTKSKGVEKMNYVCQHVIMKADQQRGDETKTIKTHLFHDETLPSFFR 232
Query: 304 RLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCP 363
RL++SPDG L+ P+G + S T + ++ T+VF+R L++PA+ LP V V+ CP
Sbjct: 233 RLSWSPDGSFLLIPAGSFKVSP-TSEAVNATYVFSRKDLSRPALQLPGASKPVVVVRFCP 291
Query: 364 VLFELK-PSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSS 422
V F+L+ S ++ FKLPYR+V A+AT N++ +YDT+ +P A +A +HY +TDITWS
Sbjct: 292 VAFKLRGSSSEEGFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSP 351
Query: 423 DGKVLIASSTDGYCSIISFGDNEIG------IPYVPPSGEESKENDPTKGEPVRSEDKP- 475
+ L SS DGYC+++ F D E+G + P GEE K++D KG+ + +E P
Sbjct: 352 NASYLALSSQDGYCTLVEFEDKELGEAVSISVGKKPVDGEE-KKHDLEKGDELMTETTPD 410
Query: 476 RSAEQAKGEGKVLGEKQTGNKVSPTDKSSE 505
S +QA+ E ++ +K++ K E
Sbjct: 411 ESKKQAELEQNEESKQPLPSKITTDGKEKE 440
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q13112 | CAF1B_HUMAN | No assigned EC number | 0.4090 | 0.8003 | 0.8890 | yes | N/A |
| Q9SXY1 | FAS2_ARATH | No assigned EC number | 0.4080 | 0.6199 | 0.7905 | yes | N/A |
| Q6ZD63 | FAS2_ORYSJ | No assigned EC number | 0.3593 | 0.7423 | 0.9128 | yes | N/A |
| O13985 | YEG3_SCHPO | No assigned EC number | 0.3164 | 0.6215 | 0.7539 | yes | N/A |
| Q04199 | CAC2_YEAST | No assigned EC number | 0.3225 | 0.6151 | 0.8162 | yes | N/A |
| Q9D0N7 | CAF1B_MOUSE | No assigned EC number | 0.4541 | 0.6167 | 0.6695 | yes | N/A |
| Q5R1S9 | CAF1B_CHICK | No assigned EC number | 0.4124 | 0.7230 | 0.7932 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 621 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 9e-31 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-28 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-27 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-20 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-16 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 5e-13 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 2e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 2e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 1e-05 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 3e-05 | |
| PTZ00421 | 493 | PTZ00421, PTZ00421, coronin; Provisional | 2e-04 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 5e-04 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 8e-04 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 8e-04 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 9e-31
Identities = 92/360 (25%), Positives = 141/360 (39%), Gaps = 83/360 (23%)
Query: 77 LSRHQKAVNVVRFSPNGELLASG--DDVGKEIWYLTERESGIANVEFASDLSRHQKAVNV 134
L H V V FSP+G+LLA+G D K +W L E H V
Sbjct: 5 LKGHTGGVTCVAFSPDGKLLATGSGDGTIK-VWDLETGELLRTLKG-------HTGPVRD 56
Query: 135 VRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLED 194
V S +G LASG + TI +W +T + + L GH
Sbjct: 57 VAASADGTYLASGSSDKTIRLWDLETGE---------------------CVRTLTGHTSY 95
Query: 195 VYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS 254
V +++SP L S S D T +WDV GK L L H +V VA+ P +VA+ S
Sbjct: 96 VSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQ 155
Query: 255 DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL 314
D +++ + +++ K + L H + S + FSPDG+ L
Sbjct: 156 DGTIKLWDLRTGKCV-------------ATL------TGHTGEVNS----VAFSPDGEKL 192
Query: 315 IAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDK 374
++ S SD T I + + T CL +L+ + V S D
Sbjct: 193 LSSS-----SDGT---IKLWDLSTGKCLG-------TLRGHENGVNSV------AFSPDG 231
Query: 375 PLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDG 434
++ + + + I ++D + ++ H +T + WS DGK L + S DG
Sbjct: 232 -------YLLASGSEDGTIRVWDLRTGECVQTLSG-HTNSVTSLAWSPDGKRLASGSADG 283
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 3e-28
Identities = 66/251 (26%), Positives = 98/251 (39%), Gaps = 57/251 (22%)
Query: 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEF 73
V SV + + + D KT K+W + +
Sbjct: 94 SYVSSVAF-----SPDGRILSSSSRD--------------KTIKVW-------DVETGKC 127
Query: 74 ASDLSRHQKAVNVVRFSPNGELLASG--DDVGKEIWYLTERESGIANVEFASDLSRHQKA 131
+ L H VN V FSP+G +AS D K +W L +A L+ H
Sbjct: 128 LTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIK-LWDLRT-GKCVAT------LTGHTGE 179
Query: 132 VNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGH 191
VN V FSP+GE L S + TI +W T + LRGH
Sbjct: 180 VNSVAFSPDGEKLLSSSSDGTIKLWDLSTGK---------------------CLGTLRGH 218
Query: 192 LEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251
V +++SP L SGS D T +WD+ G+ + L+ H V +AW P + +A+
Sbjct: 219 ENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLAS 278
Query: 252 LSSDRSLRTYS 262
S+D ++R +
Sbjct: 279 GSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 1e-27
Identities = 70/286 (24%), Positives = 112/286 (39%), Gaps = 73/286 (25%)
Query: 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91
+ +G +D KT ++W L E L+ H V+ V FSP
Sbjct: 65 YLASGSSD--------------KTIRLWDLE-------TGECVRTLTGHTSYVSSVAFSP 103
Query: 92 NGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE 150
+G +L+S ++W + + + L H VN V FSP+G +AS +
Sbjct: 104 DGRILSSSSRDKTIKVW-------DVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQD 156
Query: 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG 210
TI +W +L L GH +V +++SP L+S
Sbjct: 157 GTIKLW--------------DLRTGKCVAT-------LTGHTGEVNSVAFSPDGEKLLSS 195
Query: 211 SVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVIS 270
S D T +WD+ GK LG L H+ V VA+ P +A+ S D ++R + +++ +
Sbjct: 196 SSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE--- 252
Query: 271 RACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316
C L S H + L +SPDG+ L +
Sbjct: 253 --CVQTL---SGHT---------------NSVTSLAWSPDGKRLAS 278
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 1e-20
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 52/250 (20%)
Query: 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244
+ L+GH V +++SP L +GS D T +WD+ G+ L L H V+ VA
Sbjct: 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASA 61
Query: 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304
Y+A+ SSD+++R + +++ + + L H + S
Sbjct: 62 DGTYLASGSSDKTIRLWDLETGECV-------------RTLTG------HTSYVSS---- 98
Query: 305 LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPV 364
+ FSPDG++L + S D T I V V T CL +L+ ++ V
Sbjct: 99 VAFSPDGRILSSSS-----RDKT---IKVWDVETG-------KCLTTLRGHTDWVNSVAF 143
Query: 365 LFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDG 424
S D V + + + I L+D + A + H ++ + +S DG
Sbjct: 144 ------SPDG-------TFVASSSQDGTIKLWDLRTGKCVATL-TGHTGEVNSVAFSPDG 189
Query: 425 KVLIASSTDG 434
+ L++SS+DG
Sbjct: 190 EKLLSSSSDG 199
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 82.4 bits (202), Expect = 1e-16
Identities = 93/389 (23%), Positives = 151/389 (38%), Gaps = 76/389 (19%)
Query: 75 SDLSRHQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVN 133
L H+ ++ + FSP+GELL SG G ++W L E I ++E D S
Sbjct: 59 LLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSS----VSK 114
Query: 134 VVRFSPNGE--LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGH 191
+ SP+G LLAS + T+ +W T + + L GH
Sbjct: 115 LALSSPDGNSILLASSSLDGTVKLWDLSTP--------------------GKLIRTLEGH 154
Query: 192 LEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ-YV 249
E V +++SP L SGS +D T +WD+ GK L L H V +A+ P +
Sbjct: 155 SESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLI 214
Query: 250 ATLSSDRSLRTYSIQSKKVISRACRSKLPV-----------------DSSHELFD---KV 289
A+ SSD ++R + + + K++ D + L+D
Sbjct: 215 ASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSS 274
Query: 290 VPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCL 349
L S + FSPDG+LL + S SD T V +
Sbjct: 275 SLLRTLSGHSSSVLSVAFSPDGKLLASGS-----SDGT--------VRLWDLETGKLLSS 321
Query: 350 PSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIAN 409
+L+ + V L S D +V + + I L+D + P +
Sbjct: 322 LTLKGHEGPVSS------LSFSPD------GSLLVSGGSDDGTIRLWDLRTGKPLKTL-- 367
Query: 410 IHYTKLTDITWSSDGKVLIASSTDGYCSI 438
++ + +++S DG+V+ + STDG +
Sbjct: 368 EGHSNVLSVSFSPDGRVVSSGSTDGTVRL 396
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 71.3 bits (173), Expect = 5e-13
Identities = 61/235 (25%), Positives = 95/235 (40%), Gaps = 31/235 (13%)
Query: 72 EFASDLSRHQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQK 130
S LS H +V V FSP+G LLASG G +W L S + LS H
Sbjct: 233 LLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRT------LSGHSS 285
Query: 131 AVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVN-----KEHWIVT 185
+V V FSP+G+LLASG + T+ +W +T + L + + +V+
Sbjct: 286 SVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVS 345
Query: 186 ------------------KILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL 227
+V +S+SP + SGS D T +WD+ G L
Sbjct: 346 GGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLL 405
Query: 228 GILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSS 282
L H V + + P + +A+ SSD ++R + +++ + S
Sbjct: 406 RNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPDGKVLASK 460
|
Length = 466 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 2e-07
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 182 WIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWD 220
+ + L+GH V +++SP L SGS D T +WD
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-07
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 182 WIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWD 220
+ K L+GH V +++SP +L SGS D T +WD
Sbjct: 2 GELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 1e-05
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWK 157
L H V V FSP+G+ LASG D+ TI +W
Sbjct: 8 LKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 3e-05
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWK 157
L H V V FSP+G LLASG D+ T+ VW
Sbjct: 7 LKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 2e-04
Identities = 30/138 (21%), Positives = 60/138 (43%), Gaps = 16/138 (11%)
Query: 135 VRFSP-NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLE 193
V F+P + + L + ++ TI+ W + L + S + L+GH +
Sbjct: 81 VAFNPFDPQKLFTASEDGTIMGWGIPEE-GLTQNISDPIVH-------------LQGHTK 126
Query: 194 DVYDISWSPTSTH-LISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATL 252
V +S+ P++ + L S D +WDV +GK + ++ H + + W+ + T
Sbjct: 127 KVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTT 186
Query: 253 SSDRSLRTYSIQSKKVIS 270
S D+ L + ++S
Sbjct: 187 SKDKKLNIIDPRDGTIVS 204
|
Length = 493 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 5e-04
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 224 GKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLR 259
GK L L H V VA+ P +A+ S D ++R
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVR 36
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 8e-04
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 223 KGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYS 262
G+ L L H V VA+ P +Y+A+ S D +++ +
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 8e-04
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 188 LRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDV-HKGKN-------LGILTEHKKFVQ 238
L+GH + D+ ++P S L SGS D T +W++ H ++ IL HKK +
Sbjct: 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129
Query: 239 GVAWDPKNQYVATLSS-DRSLRTYSIQSKK 267
+ W+P N Y+ S D + + I+++K
Sbjct: 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEK 159
|
Length = 568 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 621 | |||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG1009|consensus | 434 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0973|consensus | 942 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG1408|consensus | 1080 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| KOG0278|consensus | 334 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0293|consensus | 519 | 100.0 | ||
| KOG1539|consensus | 910 | 100.0 | ||
| KOG0640|consensus | 430 | 100.0 | ||
| KOG0316|consensus | 307 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG0275|consensus | 508 | 100.0 | ||
| KOG0643|consensus | 327 | 100.0 | ||
| KOG0316|consensus | 307 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0313|consensus | 423 | 100.0 | ||
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0275|consensus | 508 | 100.0 | ||
| KOG1407|consensus | 313 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| KOG0278|consensus | 334 | 99.98 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.98 | |
| KOG0772|consensus | 641 | 99.98 | ||
| KOG0305|consensus | 484 | 99.98 | ||
| KOG0288|consensus | 459 | 99.97 | ||
| KOG0283|consensus | 712 | 99.97 | ||
| KOG0277|consensus | 311 | 99.97 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.97 | |
| KOG0274|consensus | 537 | 99.97 | ||
| KOG1446|consensus | 311 | 99.97 | ||
| KOG1446|consensus | 311 | 99.97 | ||
| KOG0310|consensus | 487 | 99.97 | ||
| KOG0289|consensus | 506 | 99.97 | ||
| KOG0268|consensus | 433 | 99.97 | ||
| KOG0299|consensus | 479 | 99.97 | ||
| KOG0310|consensus | 487 | 99.97 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.97 | |
| KOG0640|consensus | 430 | 99.96 | ||
| KOG0313|consensus | 423 | 99.96 | ||
| KOG0643|consensus | 327 | 99.96 | ||
| KOG0277|consensus | 311 | 99.96 | ||
| KOG0772|consensus | 641 | 99.96 | ||
| KOG2096|consensus | 420 | 99.96 | ||
| KOG0283|consensus | 712 | 99.96 | ||
| KOG0305|consensus | 484 | 99.96 | ||
| KOG1407|consensus | 313 | 99.96 | ||
| KOG1063|consensus | 764 | 99.96 | ||
| KOG0294|consensus | 362 | 99.96 | ||
| KOG0300|consensus | 481 | 99.96 | ||
| KOG1408|consensus | 1080 | 99.96 | ||
| KOG0288|consensus | 459 | 99.96 | ||
| KOG0639|consensus | 705 | 99.96 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.96 | |
| KOG0641|consensus | 350 | 99.96 | ||
| KOG1539|consensus | 910 | 99.96 | ||
| KOG2055|consensus | 514 | 99.96 | ||
| KOG0308|consensus | 735 | 99.96 | ||
| KOG1063|consensus | 764 | 99.96 | ||
| KOG0289|consensus | 506 | 99.96 | ||
| KOG2106|consensus | 626 | 99.96 | ||
| KOG0647|consensus | 347 | 99.95 | ||
| KOG1332|consensus | 299 | 99.95 | ||
| KOG0641|consensus | 350 | 99.95 | ||
| KOG2048|consensus | 691 | 99.95 | ||
| KOG0274|consensus | 537 | 99.95 | ||
| KOG0300|consensus | 481 | 99.95 | ||
| KOG0301|consensus | 745 | 99.95 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.95 | |
| KOG0299|consensus | 479 | 99.95 | ||
| KOG2106|consensus | 626 | 99.95 | ||
| KOG4283|consensus | 397 | 99.95 | ||
| KOG0264|consensus | 422 | 99.95 | ||
| KOG0973|consensus | 942 | 99.95 | ||
| KOG0308|consensus | 735 | 99.95 | ||
| KOG0646|consensus | 476 | 99.94 | ||
| KOG0268|consensus | 433 | 99.94 | ||
| KOG1274|consensus | 933 | 99.94 | ||
| KOG0264|consensus | 422 | 99.94 | ||
| KOG1332|consensus | 299 | 99.94 | ||
| KOG1274|consensus | 933 | 99.94 | ||
| KOG1036|consensus | 323 | 99.94 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.94 | |
| KOG0294|consensus | 362 | 99.94 | ||
| KOG1036|consensus | 323 | 99.94 | ||
| KOG0269|consensus | 839 | 99.94 | ||
| KOG2445|consensus | 361 | 99.93 | ||
| KOG1273|consensus | 405 | 99.93 | ||
| KOG2096|consensus | 420 | 99.93 | ||
| KOG0647|consensus | 347 | 99.93 | ||
| KOG0301|consensus | 745 | 99.93 | ||
| KOG0639|consensus | 705 | 99.93 | ||
| KOG2048|consensus | 691 | 99.93 | ||
| KOG1445|consensus | 1012 | 99.92 | ||
| KOG0321|consensus | 720 | 99.92 | ||
| KOG2445|consensus | 361 | 99.92 | ||
| KOG0267|consensus | 825 | 99.92 | ||
| KOG0267|consensus | 825 | 99.92 | ||
| KOG1273|consensus | 405 | 99.92 | ||
| KOG2055|consensus | 514 | 99.92 | ||
| KOG4328|consensus | 498 | 99.91 | ||
| KOG1034|consensus | 385 | 99.91 | ||
| KOG0646|consensus | 476 | 99.91 | ||
| KOG0302|consensus | 440 | 99.9 | ||
| KOG0269|consensus | 839 | 99.9 | ||
| KOG0650|consensus | 733 | 99.9 | ||
| KOG4283|consensus | 397 | 99.9 | ||
| KOG4328|consensus | 498 | 99.89 | ||
| KOG4378|consensus | 673 | 99.89 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.88 | |
| KOG4378|consensus | 673 | 99.87 | ||
| KOG1538|consensus | 1081 | 99.87 | ||
| KOG0321|consensus | 720 | 99.87 | ||
| KOG1963|consensus | 792 | 99.87 | ||
| KOG1034|consensus | 385 | 99.87 | ||
| KOG0302|consensus | 440 | 99.87 | ||
| KOG0644|consensus | 1113 | 99.87 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.86 | |
| KOG1523|consensus | 361 | 99.86 | ||
| KOG2919|consensus | 406 | 99.86 | ||
| KOG1007|consensus | 370 | 99.86 | ||
| KOG0270|consensus | 463 | 99.85 | ||
| KOG1445|consensus | 1012 | 99.85 | ||
| KOG0307|consensus | 1049 | 99.85 | ||
| KOG0642|consensus | 577 | 99.85 | ||
| KOG1007|consensus | 370 | 99.85 | ||
| KOG0650|consensus | 733 | 99.85 | ||
| KOG1538|consensus | 1081 | 99.84 | ||
| KOG0642|consensus | 577 | 99.84 | ||
| KOG0270|consensus | 463 | 99.84 | ||
| KOG4227|consensus | 609 | 99.84 | ||
| KOG2110|consensus | 391 | 99.84 | ||
| KOG1188|consensus | 376 | 99.84 | ||
| KOG0303|consensus | 472 | 99.84 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.83 | |
| KOG1963|consensus | 792 | 99.83 | ||
| KOG2919|consensus | 406 | 99.83 | ||
| KOG0644|consensus | 1113 | 99.83 | ||
| KOG0307|consensus | 1049 | 99.82 | ||
| KOG1524|consensus | 737 | 99.82 | ||
| KOG0322|consensus | 323 | 99.81 | ||
| KOG4497|consensus | 447 | 99.81 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.81 | |
| KOG0649|consensus | 325 | 99.8 | ||
| KOG0303|consensus | 472 | 99.8 | ||
| KOG1009|consensus | 434 | 99.8 | ||
| KOG4227|consensus | 609 | 99.8 | ||
| KOG1334|consensus | 559 | 99.79 | ||
| KOG0290|consensus | 364 | 99.78 | ||
| KOG0771|consensus | 398 | 99.78 | ||
| KOG1188|consensus | 376 | 99.78 | ||
| KOG0649|consensus | 325 | 99.78 | ||
| KOG4497|consensus | 447 | 99.78 | ||
| KOG2139|consensus | 445 | 99.77 | ||
| KOG1310|consensus | 758 | 99.77 | ||
| KOG1523|consensus | 361 | 99.76 | ||
| KOG1587|consensus | 555 | 99.76 | ||
| KOG0771|consensus | 398 | 99.74 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.74 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.74 | |
| KOG0290|consensus | 364 | 99.74 | ||
| KOG1587|consensus | 555 | 99.71 | ||
| KOG1310|consensus | 758 | 99.71 | ||
| KOG1517|consensus | 1387 | 99.71 | ||
| KOG2110|consensus | 391 | 99.7 | ||
| KOG1334|consensus | 559 | 99.7 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.7 | |
| KOG0322|consensus | 323 | 99.68 | ||
| KOG1240|consensus | 1431 | 99.68 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.68 | |
| KOG2139|consensus | 445 | 99.67 | ||
| KOG1524|consensus | 737 | 99.67 | ||
| KOG1272|consensus | 545 | 99.66 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.65 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.64 | |
| KOG2315|consensus | 566 | 99.64 | ||
| KOG2394|consensus | 636 | 99.64 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.64 | |
| KOG2394|consensus | 636 | 99.63 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.62 | |
| KOG1240|consensus | 1431 | 99.62 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.61 | |
| KOG2111|consensus | 346 | 99.6 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.59 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.59 | |
| KOG1517|consensus | 1387 | 99.57 | ||
| KOG2314|consensus | 698 | 99.57 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.57 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.57 | |
| KOG2321|consensus | 703 | 99.57 | ||
| KOG1272|consensus | 545 | 99.57 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.57 | |
| KOG3881|consensus | 412 | 99.56 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.56 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.55 | |
| KOG2111|consensus | 346 | 99.55 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.53 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.52 | |
| KOG0974|consensus | 967 | 99.52 | ||
| KOG2314|consensus | 698 | 99.51 | ||
| KOG2321|consensus | 703 | 99.51 | ||
| KOG3881|consensus | 412 | 99.51 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.49 | |
| KOG1354|consensus | 433 | 99.49 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.49 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.48 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.47 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.45 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.44 | |
| KOG1409|consensus | 404 | 99.44 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.43 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.42 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.4 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.4 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.37 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.35 | |
| KOG1912|consensus | 1062 | 99.34 | ||
| KOG2315|consensus | 566 | 99.34 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.33 | |
| KOG2041|consensus | 1189 | 99.32 | ||
| KOG2041|consensus | 1189 | 99.32 | ||
| KOG0974|consensus | 967 | 99.31 | ||
| KOG4547|consensus | 541 | 99.31 | ||
| KOG4547|consensus | 541 | 99.3 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.29 | |
| KOG1064|consensus | 2439 | 99.29 | ||
| KOG0309|consensus | 1081 | 99.27 | ||
| KOG0280|consensus | 339 | 99.25 | ||
| KOG4190|consensus | 1034 | 99.25 | ||
| KOG1409|consensus | 404 | 99.22 | ||
| KOG1912|consensus | 1062 | 99.22 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.17 | |
| KOG1354|consensus | 433 | 99.16 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.14 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.13 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.12 | |
| KOG0280|consensus | 339 | 99.11 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 99.09 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 99.09 | |
| KOG3914|consensus | 390 | 99.08 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.08 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.05 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.03 | |
| KOG1064|consensus | 2439 | 99.03 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.03 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.02 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 99.02 | |
| KOG1832|consensus | 1516 | 99.01 | ||
| KOG4532|consensus | 344 | 99.0 | ||
| KOG3914|consensus | 390 | 98.97 | ||
| KOG4190|consensus | 1034 | 98.97 | ||
| KOG0882|consensus | 558 | 98.97 | ||
| KOG4714|consensus | 319 | 98.94 | ||
| KOG0309|consensus | 1081 | 98.92 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.9 | |
| KOG4532|consensus | 344 | 98.89 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.87 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.85 | |
| KOG4714|consensus | 319 | 98.83 | ||
| KOG3621|consensus | 726 | 98.79 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.79 | |
| KOG4649|consensus | 354 | 98.72 | ||
| KOG2695|consensus | 425 | 98.71 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.71 | |
| KOG1275|consensus | 1118 | 98.71 | ||
| KOG1832|consensus | 1516 | 98.7 | ||
| KOG2066|consensus | 846 | 98.7 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.69 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.56 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.56 | |
| KOG1645|consensus | 463 | 98.55 | ||
| KOG3617|consensus | 1416 | 98.48 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.48 | |
| KOG2066|consensus | 846 | 98.47 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.44 | |
| KOG2695|consensus | 425 | 98.44 | ||
| KOG0882|consensus | 558 | 98.43 | ||
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.41 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.39 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.37 | |
| KOG1275|consensus | 1118 | 98.35 | ||
| KOG2114|consensus | 933 | 98.35 | ||
| KOG2114|consensus | 933 | 98.34 | ||
| KOG1920|consensus | 1265 | 98.3 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 98.26 | |
| KOG1920|consensus | 1265 | 98.25 | ||
| KOG1645|consensus | 463 | 98.25 | ||
| KOG3617|consensus | 1416 | 98.2 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.18 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 98.17 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.17 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 98.16 | |
| KOG3621|consensus | 726 | 98.15 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 98.14 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.13 | |
| KOG1008|consensus | 783 | 98.08 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 98.03 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.97 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.93 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 97.92 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.92 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.89 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 97.89 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.87 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.87 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 97.84 | |
| KOG4649|consensus | 354 | 97.81 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 97.73 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.66 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.65 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 97.62 | |
| KOG1897|consensus | 1096 | 97.6 | ||
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.6 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.57 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.56 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 97.56 | |
| KOG4640|consensus | 665 | 97.54 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.51 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.49 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.4 | |
| KOG1008|consensus | 783 | 97.39 | ||
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.38 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.37 | |
| KOG4640|consensus | 665 | 97.36 | ||
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.28 | |
| KOG2395|consensus | 644 | 97.28 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.25 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.23 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.23 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.21 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 97.21 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 97.11 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 97.09 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.09 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.07 | |
| KOG2079|consensus | 1206 | 96.96 | ||
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 96.96 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.79 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.78 | |
| KOG2395|consensus | 644 | 96.73 | ||
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 96.62 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 96.57 | |
| KOG2444|consensus | 238 | 96.56 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 96.55 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 96.55 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 96.48 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 96.45 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.44 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 96.41 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.32 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 96.18 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 96.15 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 96.12 | |
| KOG4499|consensus | 310 | 96.01 | ||
| KOG2444|consensus | 238 | 95.95 | ||
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.88 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 95.82 | |
| KOG2079|consensus | 1206 | 95.81 | ||
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 95.78 | |
| KOG4499|consensus | 310 | 95.67 | ||
| PRK13684 | 334 | Ycf48-like protein; Provisional | 95.57 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 95.54 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 95.45 | |
| KOG3630|consensus | 1405 | 95.38 | ||
| KOG4441|consensus | 571 | 95.28 | ||
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 95.26 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 95.24 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 95.2 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 95.18 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 94.98 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 94.82 | |
| KOG1916|consensus | 1283 | 94.76 | ||
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 94.71 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 94.54 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 94.52 | |
| KOG1897|consensus | 1096 | 94.42 | ||
| KOG2377|consensus | 657 | 94.41 | ||
| KOG4441|consensus | 571 | 94.33 | ||
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 94.33 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 94.22 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 94.16 | |
| KOG2377|consensus | 657 | 94.07 | ||
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 93.9 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 93.69 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 93.67 | |
| KOG2280|consensus | 829 | 93.59 | ||
| KOG3630|consensus | 1405 | 93.28 | ||
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 93.06 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 93.05 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 93.03 | |
| PRK10115 | 686 | protease 2; Provisional | 93.03 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 92.85 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 92.84 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 92.57 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 92.55 | |
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 92.19 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 92.17 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 91.83 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 91.8 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 91.8 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 91.56 | |
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 91.16 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 90.74 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 90.32 | |
| KOG1916|consensus | 1283 | 90.19 | ||
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 90.16 | |
| COG5290 | 1243 | IkappaB kinase complex, IKAP component [Transcript | 90.11 | |
| KOG2280|consensus | 829 | 90.11 | ||
| PF04192 | 237 | Utp21: Utp21 specific WD40 associated putative dom | 89.67 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 89.37 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 89.33 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 89.29 | |
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 89.27 | |
| PF11635 | 753 | Med16: Mediator complex subunit 16; InterPro: IPR0 | 88.69 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 88.55 | |
| PF03022 | 287 | MRJP: Major royal jelly protein; InterPro: IPR0035 | 88.03 | |
| KOG4460|consensus | 741 | 88.03 | ||
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 87.9 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 87.67 | |
| KOG1900|consensus | 1311 | 87.39 | ||
| KOG1898|consensus | 1205 | 87.2 | ||
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 86.63 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 86.38 | |
| KOG1983|consensus | 993 | 86.13 | ||
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 86.04 | |
| PF11635 | 753 | Med16: Mediator complex subunit 16; InterPro: IPR0 | 85.44 | |
| KOG4659|consensus | 1899 | 85.35 | ||
| KOG1900|consensus | 1311 | 85.19 | ||
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 84.87 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 84.67 | |
| KOG4460|consensus | 741 | 84.45 | ||
| PRK10115 | 686 | protease 2; Provisional | 83.82 | |
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 83.79 | |
| KOG2063|consensus | 877 | 83.71 | ||
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 83.4 | |
| KOG2247|consensus | 615 | 83.16 | ||
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 82.26 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 82.0 | |
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 81.95 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 81.43 | |
| PF10433 | 504 | MMS1_N: Mono-functional DNA-alkylating methyl meth | 80.08 |
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-52 Score=375.60 Aligned_cols=326 Identities=23% Similarity=0.376 Sum_probs=289.7
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
.-+|.++|.|++|+|+|. +||+|+.|.++| +||+.+..... +.++|...|.|++
T Consensus 111 ~~GH~e~Vl~~~fsp~g~-----~l~tGsGD~TvR--------------~WD~~TeTp~~-------t~KgH~~WVlcva 164 (480)
T KOG0271|consen 111 IAGHGEAVLSVQFSPTGS-----RLVTGSGDTTVR--------------LWDLDTETPLF-------TCKGHKNWVLCVA 164 (480)
T ss_pred cCCCCCcEEEEEecCCCc-----eEEecCCCceEE--------------eeccCCCCcce-------eecCCccEEEEEE
Confidence 357899999999999999 999999999999 99998876544 4899999999999
Q ss_pred EccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-----CCCEEEEEeCCCcEEEEEccCCC
Q psy15549 89 FSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-----NGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 89 ~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-----~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
|+|||+.||+|+ ++.|++|+...++ .....+.+|...|++++|.| ..++||+++.||.|+|||+..+.
T Consensus 165 wsPDgk~iASG~~dg~I~lwdpktg~------~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~ 238 (480)
T KOG0271|consen 165 WSPDGKKIASGSKDGSIRLWDPKTGQ------QIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGT 238 (480)
T ss_pred ECCCcchhhccccCCeEEEecCCCCC------cccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCce
Confidence 999999999999 9999999998886 66778999999999999976 56799999999999999999887
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~ 242 (621)
++ ..+.+|..+|+|+.|--+| +|++|+.|++|++|+...|.+...+++|...|..++.
T Consensus 239 ~~---------------------~~lsgHT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lal 296 (480)
T KOG0271|consen 239 CV---------------------RTLSGHTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLAL 296 (480)
T ss_pred EE---------------------EEeccCccceEEEEEcCCc-eEEecCCCceEEEEEccchhHHHhhcccchheeeeec
Confidence 64 6778999999999998665 8999999999999999999999999999999998887
Q ss_pred c-----------CCCC-------------------------EEEEEeCCCcEEEEEccCce-eeeecccCCCCCCCcccc
Q psy15549 243 D-----------PKNQ-------------------------YVATLSSDRSLRTYSIQSKK-VISRACRSKLPVDSSHEL 285 (621)
Q Consensus 243 s-----------p~~~-------------------------~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~ 285 (621)
+ |.++ .|++|+.|.++.+|+....+ .+..+.
T Consensus 297 sTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmt------------ 364 (480)
T KOG0271|consen 297 STDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMT------------ 364 (480)
T ss_pred cchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhh------------
Confidence 6 3333 49999999999999865432 333332
Q ss_pred ccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeecccee
Q psy15549 286 FDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVL 365 (621)
Q Consensus 286 ~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (621)
.|...|+.+.||||++++|+++
T Consensus 365 -----------gHq~lVn~V~fSPd~r~IASaS----------------------------------------------- 386 (480)
T KOG0271|consen 365 -----------GHQALVNHVSFSPDGRYIASAS----------------------------------------------- 386 (480)
T ss_pred -----------chhhheeeEEECCCccEEEEee-----------------------------------------------
Confidence 3445568888888888888766
Q ss_pred eecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 366 FELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
-|..|++||..+|+.+..+ .+|-..|..++|+.|.++|++||.|.++++|++.+.+
T Consensus 387 -----------------------FDkSVkLW~g~tGk~lasf-RGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkK 442 (480)
T KOG0271|consen 387 -----------------------FDKSVKLWDGRTGKFLASF-RGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKK 442 (480)
T ss_pred -----------------------cccceeeeeCCCcchhhhh-hhccceeEEEEeccCccEEEEcCCCceEEEEEeeeee
Confidence 6788999999999999988 5799999999999999999999999999999999999
Q ss_pred CCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhc
Q psy15549 446 IGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~ 482 (621)
+...+++|..++..+.++|||..+++++.|..+++|.
T Consensus 443 l~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 443 LKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred ecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 9999999999999999999999999999999999985
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-47 Score=338.49 Aligned_cols=329 Identities=21% Similarity=0.323 Sum_probs=271.0
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
...+.||.++|.|++|+|+|..|++|+ |.++++||+.+. .+..+..+|...|.|++|+|||+.||+|+.||+
T Consensus 108 ssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~Te-------Tp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~ 180 (480)
T KOG0271|consen 108 SSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTE-------TPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGS 180 (480)
T ss_pred ccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCC-------CcceeecCCccEEEEEEECCCcchhhccccCCe
Confidence 456889999999999999999999998 999999999987 778899999999999999999999999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-----CCCEEEEEeCCCeEEEEECCCCcEE
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-----TSTHLISGSVDNTAIMWDVHKGKNL 227 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-----d~~~l~s~~~dg~i~vwd~~~~~~~ 227 (621)
|++||..+++++ ...+.+|...|++++|.| ..++||+++.||.|+|||+..++++
T Consensus 181 I~lwdpktg~~~--------------------g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~ 240 (480)
T KOG0271|consen 181 IRLWDPKTGQQI--------------------GRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCV 240 (480)
T ss_pred EEEecCCCCCcc--------------------cccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEE
Confidence 999999999875 467899999999999977 5679999999999999999999999
Q ss_pred EEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 228 GILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
..+.+|..+|+|+.|--+ .++++|+.|++|++|+...|.+.+.+.+| ..+|+.++.
T Consensus 241 ~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG~~~r~lkGH-----------------------ahwvN~lal 296 (480)
T KOG0271|consen 241 RTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRALDGKLCRELKGH-----------------------AHWVNHLAL 296 (480)
T ss_pred EEeccCccceEEEEEcCC-ceEEecCCCceEEEEEccchhHHHhhccc-----------------------chheeeeec
Confidence 999999999999999754 48999999999999999999988887654 445677777
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
+.|-- |-++. .|.+-+-....... .-.... +| ..+..-.+..++++
T Consensus 297 sTdy~-LRtga-----f~~t~~~~~~~se~----------~~~Al~------rY------------~~~~~~~~erlVSg 342 (480)
T KOG0271|consen 297 STDYV-LRTGA-----FDHTGRKPKSFSEE----------QKKALE------RY------------EAVLKDSGERLVSG 342 (480)
T ss_pred cchhh-hhccc-----cccccccCCChHHH----------HHHHHH------HH------------HHhhccCcceeEEe
Confidence 65521 11211 11111100000000 000000 00 01111134789999
Q ss_pred EcCCcEEEEeCCCCc-eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCC
Q psy15549 388 ATENNILLYDTQHAS-PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKG 466 (621)
Q Consensus 388 ~~dg~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (621)
+.|.++.+|+....+ ++..+ .+|..-|+.+.||||++++|++|.|..|++|+..+|+.+..|.+|-..+..+.++.|.
T Consensus 343 sDd~tlflW~p~~~kkpi~rm-tgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDs 421 (480)
T KOG0271|consen 343 SDDFTLFLWNPFKSKKPITRM-TGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADS 421 (480)
T ss_pred cCCceEEEecccccccchhhh-hchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCc
Confidence 999999999976654 66666 5799999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCcccHHHhcccCccc
Q psy15549 467 EPVRSEDKPRSAEQAKGEGKVL 488 (621)
Q Consensus 467 ~~~~s~~~~~~~~~w~~~~~~~ 488 (621)
+.+++.+.|.++++|++..+.+
T Consensus 422 RLlVS~SkDsTLKvw~V~tkKl 443 (480)
T KOG0271|consen 422 RLLVSGSKDSTLKVWDVRTKKL 443 (480)
T ss_pred cEEEEcCCCceEEEEEeeeeee
Confidence 9999999999999999877644
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-46 Score=340.60 Aligned_cols=283 Identities=23% Similarity=0.416 Sum_probs=254.4
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
.+...||..+.||+|+. .||||+-+|.++ +|+...... ..+|.+|.+.|.++.|
T Consensus 172 ~gd~rPis~~~fS~ds~-----~laT~swsG~~k--------------vW~~~~~~~-------~~~l~gH~~~v~~~~f 225 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSK-----HLATGSWSGLVK--------------VWSVPQCNL-------LQTLRGHTSRVGAAVF 225 (459)
T ss_pred ccCCCcceeeEeecCCC-----eEEEeecCCcee--------------EeecCCcce-------eEEEeccccceeeEEE
Confidence 34577999999999999 999999999999 998886644 4459999999999999
Q ss_pred ccC--CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 90 SPN--GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 90 spd--g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
+|. +.-||+|+ |+.+++|++... .++..+.+|...|..++|+|+|++|+|++.|.+-++||+.++..+
T Consensus 226 hP~~~~~~lat~s~Dgtvklw~~~~e-------~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~El-- 296 (459)
T KOG0272|consen 226 HPVDSDLNLATASADGTVKLWKLSQE-------TPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSEL-- 296 (459)
T ss_pred ccCCCccceeeeccCCceeeeccCCC-------cchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhh--
Confidence 996 67899988 999999999987 778899999999999999999999999999999999999999875
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCC
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKN 246 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~ 246 (621)
....||...|.+++|.|||.++++|+.|..-+|||+++|.++..+.+|..+|.+++|+|+|
T Consensus 297 -------------------L~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNG 357 (459)
T KOG0272|consen 297 -------------------LLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNG 357 (459)
T ss_pred -------------------HhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCc
Confidence 5567999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC-CCCeEEeccccccCCC
Q psy15549 247 QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP-DGQLLIAPSGCLENSD 325 (621)
Q Consensus 247 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-dg~~l~~~s~~~~~~d 325 (621)
..||||+.|++++|||++....+.++..| ..-|+.+.|+| .|.+|+
T Consensus 358 y~lATgs~Dnt~kVWDLR~r~~ly~ipAH-----------------------~nlVS~Vk~~p~~g~fL~---------- 404 (459)
T KOG0272|consen 358 YHLATGSSDNTCKVWDLRMRSELYTIPAH-----------------------SNLVSQVKYSPQEGYFLV---------- 404 (459)
T ss_pred eEEeecCCCCcEEEeeecccccceecccc-----------------------cchhhheEecccCCeEEE----------
Confidence 99999999999999999988876666433 34457788887 344444
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA 405 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 405 (621)
+++.|++++||...+..++.
T Consensus 405 ------------------------------------------------------------TasyD~t~kiWs~~~~~~~k 424 (459)
T KOG0272|consen 405 ------------------------------------------------------------TASYDNTVKIWSTRTWSPLK 424 (459)
T ss_pred ------------------------------------------------------------EcccCcceeeecCCCcccch
Confidence 44578899999999999999
Q ss_pred EEecccccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 406 FIANIHYTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 406 ~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
.+ .||.+.|.++..++|+++|+|++.|.+|++|.
T Consensus 425 sL-aGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 425 SL-AGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred hh-cCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 88 57999999999999999999999999999995
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=305.40 Aligned_cols=297 Identities=23% Similarity=0.384 Sum_probs=259.2
Q ss_pred cccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccC
Q psy15549 3 CTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK 82 (621)
Q Consensus 3 ~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~ 82 (621)
+..-+++.+|.+.|+++.|++|.+ +|++++.||.+. |||..+..+... +.--..
T Consensus 45 ~~~rr~LkGH~~Ki~~~~ws~Dsr-----~ivSaSqDGklI--------------vWDs~TtnK~ha-------ipl~s~ 98 (343)
T KOG0286|consen 45 MRTRRTLKGHLNKIYAMDWSTDSR-----RIVSASQDGKLI--------------VWDSFTTNKVHA-------IPLPSS 98 (343)
T ss_pred eeeEEEecccccceeeeEecCCcC-----eEEeeccCCeEE--------------EEEcccccceeE-------EecCce
Confidence 455678899999999999999999 999999999999 888877655433 445578
Q ss_pred cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 83 AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
.|..++|+|.|+++|+|+ |+...||++...... ......+.+.+|++.+.++.|.+|+ .|++++.|.+..+||++++
T Consensus 99 WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~-g~~~v~r~l~gHtgylScC~f~dD~-~ilT~SGD~TCalWDie~g 176 (343)
T KOG0286|consen 99 WVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAE-GNVRVSRELAGHTGYLSCCRFLDDN-HILTGSGDMTCALWDIETG 176 (343)
T ss_pred eEEEEEECCCCCeEEecCcCceeEEEeccccccc-ccceeeeeecCccceeEEEEEcCCC-ceEecCCCceEEEEEcccc
Confidence 999999999999999999 999999999854211 1225566789999999999999855 7889999999999999999
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 240 (621)
+.+ ..+.+|.+.|.+++++| +++.+++|+-|+..++||++.+.++++|.+|...|.++
T Consensus 177 ~~~---------------------~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv 235 (343)
T KOG0286|consen 177 QQT---------------------QVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSV 235 (343)
T ss_pred eEE---------------------EEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceE
Confidence 865 66789999999999999 99999999999999999999999999999999999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 241 AWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 241 ~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
+|.|+|.-|++|+.|++.|+||++..+.+..+. .+.....|++++||..|++|+++.
T Consensus 236 ~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys---------------------~~~~~~gitSv~FS~SGRlLfagy-- 292 (343)
T KOG0286|consen 236 RFFPSGDAFATGSDDATCRLYDLRADQELAVYS---------------------HDSIICGITSVAFSKSGRLLFAGY-- 292 (343)
T ss_pred EEccCCCeeeecCCCceeEEEeecCCcEEeeec---------------------cCcccCCceeEEEcccccEEEeee--
Confidence 999999999999999999999999988776653 234455678888888777776544
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
.|.++.+||.-.
T Consensus 293 --------------------------------------------------------------------~d~~c~vWDtlk 304 (343)
T KOG0286|consen 293 --------------------------------------------------------------------DDFTCNVWDTLK 304 (343)
T ss_pred --------------------------------------------------------------------cCCceeEeeccc
Confidence 678889999999
Q ss_pred CceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 401 ASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 401 ~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
++.+..+ .+|.+.|+++..+|||.-|+|||.|.+++||.
T Consensus 305 ~e~vg~L-~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 305 GERVGVL-AGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred cceEEEe-eccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 9888888 47999999999999999999999999999994
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=327.26 Aligned_cols=284 Identities=21% Similarity=0.309 Sum_probs=262.5
Q ss_pred cccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC--CCEEEEEeCCCcE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN--GELLASGDDESTI 153 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~--g~~l~s~s~dg~i 153 (621)
-.+.+.+|..+.||.|+..||+|+ +|.+++|+.... ..+..+.+|...|.++.|+|. +..||+|+.||++
T Consensus 171 Q~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~-------~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtv 243 (459)
T KOG0272|consen 171 QVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQC-------NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTV 243 (459)
T ss_pred hccCCCcceeeEeecCCCeEEEeecCCceeEeecCCc-------ceeEEEeccccceeeEEEccCCCccceeeeccCCce
Confidence 346678999999999999999999 999999999977 778889999999999999995 6699999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH 233 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 233 (621)
++|++.+...+ ..+.+|...|..++|+|+|++|+|++.|.+-++||++++..+....+|
T Consensus 244 klw~~~~e~~l---------------------~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGH 302 (459)
T KOG0272|consen 244 KLWKLSQETPL---------------------QDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGH 302 (459)
T ss_pred eeeccCCCcch---------------------hhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhccc
Confidence 99999998765 566899999999999999999999999999999999999999888999
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
...|.+++|+|||..+++|+.|..-+|||++++.++-.+.+ |...|.+++|+|+|..
T Consensus 303 s~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~g-----------------------H~k~I~~V~fsPNGy~ 359 (459)
T KOG0272|consen 303 SKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAG-----------------------HIKEILSVAFSPNGYH 359 (459)
T ss_pred ccccceeEecCCCceeeccCccchhheeecccCcEEEEecc-----------------------cccceeeEeECCCceE
Confidence 99999999999999999999999999999999999887754 3455689999999988
Q ss_pred EEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcE
Q psy15549 314 LIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNI 393 (621)
Q Consensus 314 l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 393 (621)
||+++ .|+++
T Consensus 360 lATgs----------------------------------------------------------------------~Dnt~ 369 (459)
T KOG0272|consen 360 LATGS----------------------------------------------------------------------SDNTC 369 (459)
T ss_pred EeecC----------------------------------------------------------------------CCCcE
Confidence 88776 67888
Q ss_pred EEEeCCCCceeEEEecccccceEEEEEcC-CCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccC
Q psy15549 394 LLYDTQHASPFAFIANIHYTKLTDITWSS-DGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSE 472 (621)
Q Consensus 394 ~iwd~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 472 (621)
+|||++....+..+. +|.+-|+.+.|+| .|.+|+|++.|++++||...+..+++.+.+|.+.+.++..++++..+++.
T Consensus 370 kVWDLR~r~~ly~ip-AH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~ 448 (459)
T KOG0272|consen 370 KVWDLRMRSELYTIP-AHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATS 448 (459)
T ss_pred EEeeecccccceecc-cccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEe
Confidence 999999888888884 6999999999999 68899999999999999999999999999999999999999999999999
Q ss_pred CCcccHHHhc
Q psy15549 473 DKPRSAEQAK 482 (621)
Q Consensus 473 ~~~~~~~~w~ 482 (621)
+.|.++++|.
T Consensus 449 s~DRT~KLW~ 458 (459)
T KOG0272|consen 449 SFDRTIKLWR 458 (459)
T ss_pred ccCceeeecc
Confidence 9999999995
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=307.99 Aligned_cols=425 Identities=15% Similarity=0.188 Sum_probs=325.3
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
...+...|..+++-..|||.|. ++|+|...|.|| |||....+ ..+..+++.-.++|
T Consensus 51 ~~~iYtEH~~~vtVAkySPsG~-----yiASGD~sG~vR--------------IWdtt~~~-----hiLKnef~v~aG~I 106 (603)
T KOG0318|consen 51 SVDIYTEHAHQVTVAKYSPSGF-----YIASGDVSGKVR--------------IWDTTQKE-----HILKNEFQVLAGPI 106 (603)
T ss_pred ceeeeccccceeEEEEeCCCce-----EEeecCCcCcEE--------------EEeccCcc-----eeeeeeeeeccccc
Confidence 3457778899999999999997 999999999999 99877543 22345677788999
Q ss_pred EEEEEccCCCEEEEEcCCc---eEEEEeccCccccccceecccccccCCCeEEEEECCCCC-EEEEEeCCCcEEEEEccC
Q psy15549 85 NVVRFSPNGELLASGDDVG---KEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE-LLASGDDESTIIVWKQKT 160 (621)
Q Consensus 85 ~~l~~spdg~~las~~d~~---v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~-~l~s~s~dg~i~vwd~~~ 160 (621)
..++|+.|++.|++.+++. .+++-.+.+ ..+-.+.+|...|+++.|-|... .+++|++|++|.+|+-.-
T Consensus 107 ~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG-------~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPP 179 (603)
T KOG0318|consen 107 KDISWDFDSKRIAAVGEGRERFGHVFLWDSG-------NSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPP 179 (603)
T ss_pred ccceeCCCCcEEEEEecCccceeEEEEecCC-------CccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCC
Confidence 9999999999998877443 334434444 44677899999999999998654 799999999999997443
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec---cCCcce
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT---EHKKFV 237 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~---~~~~~v 237 (621)
-+ ....+..|..-|.|+.|+|||.++++.+.||.+.+||=.+++.+..+. +|.+.|
T Consensus 180 FK---------------------Fk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsI 238 (603)
T KOG0318|consen 180 FK---------------------FKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSI 238 (603)
T ss_pred ee---------------------eeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccE
Confidence 33 235667899999999999999999999999999999999999999997 899999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCC--------cccc------------ccccccccccCC
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDS--------SHEL------------FDKVVPLFHDDT 297 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~------------~~~~~~~~~~~~ 297 (621)
.+++|+||+..|++++.|.+++|||+.+.++++++.....-..+ .+.. .+...++.....
T Consensus 239 falsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~G 318 (603)
T KOG0318|consen 239 FALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISG 318 (603)
T ss_pred EEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecc
Confidence 99999999999999999999999999999988887654431000 0000 011124445567
Q ss_pred cccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeeccc----CCCceecCCcc-cce----------------
Q psy15549 298 MKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACL----NKPAVCLPSLQ-YYS---------------- 356 (621)
Q Consensus 298 ~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~---------------- 356 (621)
|...|+++..+||+++|++++ .||.+.-|+.......+.. ......+.... ..+
T Consensus 319 HnK~ITaLtv~~d~~~i~Sgs-----yDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~ 393 (603)
T KOG0318|consen 319 HNKSITALTVSPDGKTIYSGS-----YDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKD 393 (603)
T ss_pred cccceeEEEEcCCCCEEEeec-----cCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEeccc
Confidence 888899999999999999999 9999999987655433221 11111111111 111
Q ss_pred --------eeeeccceeeecCCCC-----------------------------CCCCccCCCcEEEEEEcCCcEEEEeCC
Q psy15549 357 --------VAVKCCPVLFELKPSD-----------------------------DKPLFKLPYRIVIAVATENNILLYDTQ 399 (621)
Q Consensus 357 --------~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~l~~~~~dg~i~iwd~~ 399 (621)
..+...|.......++ ...++.+++..+++|+.|+.|+||.+.
T Consensus 394 ~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~ 473 (603)
T KOG0318|consen 394 NGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLS 473 (603)
T ss_pred CcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEec
Confidence 1111222211111111 133456677899999999999999999
Q ss_pred CCceeEE-EecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcc-cCCCCCcccccCCCCCCCCcccCCCccc
Q psy15549 400 HASPFAF-IANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIP-YVPPSGEESKENDPTKGEPVRSEDKPRS 477 (621)
Q Consensus 400 ~~~~~~~-~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 477 (621)
.+..... ....|.++|+++++|||+.+||+|...+.+.+||+.+.+.... +.-|...+.++.++|+...+++++.|..
T Consensus 474 g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~ 553 (603)
T KOG0318|consen 474 GDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTN 553 (603)
T ss_pred CCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccce
Confidence 8764333 2245999999999999999999999999999999999876443 3448899999999999999999999999
Q ss_pred HHHhcccCc
Q psy15549 478 AEQAKGEGK 486 (621)
Q Consensus 478 ~~~w~~~~~ 486 (621)
|.+|.+...
T Consensus 554 Viiysv~kP 562 (603)
T KOG0318|consen 554 VIIYSVKKP 562 (603)
T ss_pred EEEEEccCh
Confidence 999986643
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=288.94 Aligned_cols=296 Identities=17% Similarity=0.244 Sum_probs=259.0
Q ss_pred eeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC
Q psy15549 71 VEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD 149 (621)
Q Consensus 71 ~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~ 149 (621)
+...+++++|.+.|.++.|++|.+.|++++ |+.+.|||..+. ...+.+.-....|..++|+|.|+++|+|+.
T Consensus 45 ~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~Tt-------nK~haipl~s~WVMtCA~sPSg~~VAcGGL 117 (343)
T KOG0286|consen 45 MRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTT-------NKVHAIPLPSSWVMTCAYSPSGNFVACGGL 117 (343)
T ss_pred eeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccc-------cceeEEecCceeEEEEEECCCCCeEEecCc
Confidence 334567999999999999999999999999 999999999877 445556667789999999999999999999
Q ss_pred CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Q psy15549 150 ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI 229 (621)
Q Consensus 150 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~ 229 (621)
|....||++.+...-.. -.+.+.+.+|.+.+.|+.|-+| .+|++++.|.++.+||+++++.+..
T Consensus 118 dN~Csiy~ls~~d~~g~---------------~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~ 181 (343)
T KOG0286|consen 118 DNKCSIYPLSTRDAEGN---------------VRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQV 181 (343)
T ss_pred CceeEEEeccccccccc---------------ceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccceEEEE
Confidence 99999999986522110 1134678999999999999985 4799999999999999999999999
Q ss_pred eccCCcceEEEEEcC-CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeec
Q psy15549 230 LTEHKKFVQGVAWDP-KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 308 (621)
|.+|.+.|.++.++| +++.+++|+-|+..++||++.+...+.+.+| .+-|+++.|.
T Consensus 182 f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~gh-----------------------esDINsv~ff 238 (343)
T KOG0286|consen 182 FHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGH-----------------------ESDINSVRFF 238 (343)
T ss_pred ecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeeccc-----------------------ccccceEEEc
Confidence 999999999999999 9999999999999999999999999988754 4456899999
Q ss_pred CCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE
Q psy15549 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA 388 (621)
Q Consensus 309 pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (621)
|+|.-+++++
T Consensus 239 P~G~afatGS---------------------------------------------------------------------- 248 (343)
T KOG0286|consen 239 PSGDAFATGS---------------------------------------------------------------------- 248 (343)
T ss_pred cCCCeeeecC----------------------------------------------------------------------
Confidence 9998888776
Q ss_pred cCCcEEEEeCCCCceeEEEec-ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCC
Q psy15549 389 TENNILLYDTQHASPFAFIAN-IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGE 467 (621)
Q Consensus 389 ~dg~i~iwd~~~~~~~~~~~~-~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (621)
+|++.++||++..+.+..+.. .-..+|++++||..|++|++|..|.++.+||.-.++....+.+|...+.++..+|||.
T Consensus 249 DD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~ 328 (343)
T KOG0286|consen 249 DDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGM 328 (343)
T ss_pred CCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCc
Confidence 567777777777776666532 2235899999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCcccHHHhc
Q psy15549 468 PVRSEDKPRSAEQAK 482 (621)
Q Consensus 468 ~~~s~~~~~~~~~w~ 482 (621)
.+++++.|..+++|.
T Consensus 329 av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 329 AVATGSWDSTLRIWA 343 (343)
T ss_pred EEEecchhHheeecC
Confidence 999999999999994
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=306.72 Aligned_cols=416 Identities=20% Similarity=0.244 Sum_probs=320.5
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
..+|...|.+++|-|..+ .+++||+.|+.|. +|.=. .+++..++..|..-|+|+.
T Consensus 143 i~GhSr~ins~~~KpsRP----fRi~T~sdDn~v~--------------ffeGP-------PFKFk~s~r~HskFV~~VR 197 (603)
T KOG0318|consen 143 ITGHSRRINSVDFKPSRP----FRIATGSDDNTVA--------------FFEGP-------PFKFKSSFREHSKFVNCVR 197 (603)
T ss_pred eeccceeEeeeeccCCCc----eEEEeccCCCeEE--------------EeeCC-------CeeeeecccccccceeeEE
Confidence 346778999999999998 8999999999998 55422 4566777899999999999
Q ss_pred EccCCCEEEEEc-CCceEEEEeccCccccccceeccccc---ccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 89 FSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLS---RHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 89 ~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~---~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
|+|||.++|+++ |+++.+||-.++ +.+..+. +|.+.|.+++|+||++.|++++.|.+++|||+.+.+.+
T Consensus 198 ysPDG~~Fat~gsDgki~iyDGktg-------e~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv 270 (603)
T KOG0318|consen 198 YSPDGSRFATAGSDGKIYIYDGKTG-------EKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLV 270 (603)
T ss_pred ECCCCCeEEEecCCccEEEEcCCCc-------cEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceE
Confidence 999999999876 999999998887 3444444 89999999999999999999999999999999999888
Q ss_pred CCCCCCCccccc----------------------ccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC
Q psy15549 165 PEFPSSNLDEEN----------------------VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH 222 (621)
Q Consensus 165 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~ 222 (621)
++++........ .+.....+...+.+|...|+++..+||+++|++|+.||.|.-|++.
T Consensus 271 ~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~ 350 (603)
T KOG0318|consen 271 STWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSG 350 (603)
T ss_pred EEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecC
Confidence 776543321100 0112222457788999999999999999999999999999999999
Q ss_pred CCcEEEEe-ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeec--ccCCCCCC--Cccc------ccccccc
Q psy15549 223 KGKNLGIL-TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRA--CRSKLPVD--SSHE------LFDKVVP 291 (621)
Q Consensus 223 ~~~~~~~~-~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~--~~~~------~~~~~~~ 291 (621)
++..-... +.|...|.+++.+..+. +++++.|.++++.++......... .....|.. .... .....+.
T Consensus 351 ~g~~~~~~g~~h~nqI~~~~~~~~~~-~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv 429 (603)
T KOG0318|consen 351 SGTSDRLAGKGHTNQIKGMAASESGE-LFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIV 429 (603)
T ss_pred CccccccccccccceEEEEeecCCCc-EEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEE
Confidence 88765544 67999999999886554 667889999999988544322221 11111110 0000 0111111
Q ss_pred ccc------cCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeecccee
Q psy15549 292 LFH------DDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVL 365 (621)
Q Consensus 292 ~~~------~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (621)
+.. ..+..-...+++++|++..+++++ .|+.+++|.+.... ..+...+..|...+..++|+|
T Consensus 430 ~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG-----~Dgkvhvysl~g~~-----l~ee~~~~~h~a~iT~vaySp-- 497 (603)
T KOG0318|consen 430 LLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGG-----QDGKVHVYSLSGDE-----LKEEAKLLEHRAAITDVAYSP-- 497 (603)
T ss_pred EEecCCcceeeccccccceEEEcCCCCEEEEec-----ccceEEEEEecCCc-----ccceeeeecccCCceEEEECC--
Confidence 111 112334457899999999999999 99999999876321 133445667889999999998
Q ss_pred eecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC-
Q psy15549 366 FELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN- 444 (621)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~- 444 (621)
++.+|+++...+.+.+||+.+.+........|...|.+++|+|+.+++|||+.|-+|.||+++..
T Consensus 498 --------------d~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~ 563 (603)
T KOG0318|consen 498 --------------DGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPA 563 (603)
T ss_pred --------------CCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChh
Confidence 78899999999999999999988755544569999999999999999999999999999999864
Q ss_pred cCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhccc
Q psy15549 445 EIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
+.+....+|...++.+.|- +...+++.+.|..+++|..+
T Consensus 564 ~~i~iknAH~~gVn~v~wl-de~tvvSsG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 564 KHIIIKNAHLGGVNSVAWL-DESTVVSSGQDANIKVWNVT 602 (603)
T ss_pred hheEeccccccCceeEEEe-cCceEEeccCcceeEEeccc
Confidence 3444455577778887774 44678999999999999753
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=282.37 Aligned_cols=297 Identities=22% Similarity=0.302 Sum_probs=248.6
Q ss_pred ccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCc
Q psy15549 4 TIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA 83 (621)
Q Consensus 4 ~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~ 83 (621)
.....+-+|.+.|+.++..+.+. ..|++++.|..+. +|++...... .-.+.+.+.||...
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~----~~l~sasrDk~ii--------------~W~L~~dd~~--~G~~~r~~~GHsH~ 65 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNS----DILVSASRDKTII--------------VWKLTSDDIK--YGVPVRRLTGHSHF 65 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCC----ceEEEcccceEEE--------------EEEeccCccc--cCceeeeeeccceE
Confidence 44567788999999999999865 5999999999999 8888765322 22345679999999
Q ss_pred EEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 84 VNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 84 V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
|..+..++||++.++++ |+.+++||+..+ +..+.|.+|...|.+++|++|.+.|++|+.|.+|.+|+.....
T Consensus 66 v~dv~~s~dg~~alS~swD~~lrlWDl~~g-------~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~c 138 (315)
T KOG0279|consen 66 VSDVVLSSDGNFALSASWDGTLRLWDLATG-------ESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVC 138 (315)
T ss_pred ecceEEccCCceEEeccccceEEEEEecCC-------cEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccE
Confidence 99999999999999999 999999999988 6778899999999999999999999999999999999987664
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT--STHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 240 (621)
.. ...-..+..-|.|+.|+|+ ..+|++++.|++|++||+++.+....+.+|.+.++.+
T Consensus 139 k~--------------------t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~ 198 (315)
T KOG0279|consen 139 KY--------------------TIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTV 198 (315)
T ss_pred EE--------------------EEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEE
Confidence 32 1112233788999999997 6899999999999999999999999999999999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 241 AWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 241 ~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
++||||..+++|+.||.+.+||++.++.+..+. +...|.+++|+|+.-.|+.+.
T Consensus 199 ~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~------------------------a~~~v~sl~fspnrywL~~at-- 252 (315)
T KOG0279|consen 199 TVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE------------------------AFDIVNSLCFSPNRYWLCAAT-- 252 (315)
T ss_pred EECCCCCEEecCCCCceEEEEEccCCceeEecc------------------------CCCeEeeEEecCCceeEeecc--
Confidence 999999999999999999999999999877763 344678999999887776654
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
+..|+|||+.+
T Consensus 253 ---------------------------------------------------------------------~~sIkIwdl~~ 263 (315)
T KOG0279|consen 253 ---------------------------------------------------------------------ATSIKIWDLES 263 (315)
T ss_pred ---------------------------------------------------------------------CCceEEEeccc
Confidence 23366666666
Q ss_pred CceeEEEec--------ccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 401 ASPFAFIAN--------IHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 401 ~~~~~~~~~--------~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
+..+..+.. .......+++|++||+.|++|-.|+.|++|.+.
T Consensus 264 ~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 264 KAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred hhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 655544321 113346789999999999999999999999975
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=315.65 Aligned_cols=399 Identities=15% Similarity=0.200 Sum_probs=311.3
Q ss_pred cCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccc-cccceeeccccccccCcEEEEEE
Q psy15549 11 HNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERES-GIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 11 ~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~-~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
+.+.+|.|+.|||+|+ ++|+|.. ..+. ||....... ....+.+.+++.+|...|.++.|
T Consensus 94 ~fk~~v~~i~fSPng~-----~fav~~g-n~lq--------------iw~~P~~~~~~~~pFvl~r~~~g~fddi~si~W 153 (893)
T KOG0291|consen 94 NFKRGVGAIKFSPNGK-----FFAVGCG-NLLQ--------------IWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDW 153 (893)
T ss_pred eecCccceEEECCCCc-----EEEEEec-ceeE--------------EEecCcchhcccCcceEeeeecCCccceeEEEe
Confidence 4578999999999997 7777664 4677 887765433 34456677889999999999999
Q ss_pred ccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 90 SPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 90 spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
+.|.++|++|+ |..+++|.+..... -....+.+|.+.|.++-|..+..-+++.+.||.+.+|..........-.
T Consensus 154 s~DSr~l~~gsrD~s~rl~~v~~~k~-----~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~ 228 (893)
T KOG0291|consen 154 SDDSRLLVTGSRDLSARLFGVDGNKN-----LFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKA 228 (893)
T ss_pred ccCCceEEeccccceEEEEEeccccc-----cceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccc
Confidence 99999999998 88899999987643 3356789999999999999999999999999999999876221100000
Q ss_pred ----------------------------------C--CCcccccc-------------------cccceeeeeeecCCCC
Q psy15549 169 ----------------------------------S--SNLDEENV-------------------NKEHWIVTKILRGHLE 193 (621)
Q Consensus 169 ----------------------------------~--~~~~~~~~-------------------~~~~~~~~~~~~~~~~ 193 (621)
. .+...... .-....+...+.-...
T Consensus 229 ~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~ 308 (893)
T KOG0291|consen 229 EKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQ 308 (893)
T ss_pred cccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccc
Confidence 0 00000000 0011122233333446
Q ss_pred CeEEEEECCCCCEEEEEeCC-CeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeec
Q psy15549 194 DVYDISWSPTSTHLISGSVD-NTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 194 ~v~~i~~spd~~~l~s~~~d-g~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
.|..++|+..|.+||.|+.. |.+.||+..+..-+...++|...+.+++++|||+++++|+.||.|+|||..++-+..++
T Consensus 309 ~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTF 388 (893)
T KOG0291|consen 309 KILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTF 388 (893)
T ss_pred eeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEe
Confidence 67888899899999998875 89999999988888888899999999999999999999999999999999999999888
Q ss_pred ccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCc
Q psy15549 273 CRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSL 352 (621)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~ 352 (621)
..| .+.++.+.|+..|+.+++.+ .||+++.||+......+++..|..
T Consensus 389 teH-----------------------ts~Vt~v~f~~~g~~llssS-----LDGtVRAwDlkRYrNfRTft~P~p----- 435 (893)
T KOG0291|consen 389 TEH-----------------------TSGVTAVQFTARGNVLLSSS-----LDGTVRAWDLKRYRNFRTFTSPEP----- 435 (893)
T ss_pred ccC-----------------------CCceEEEEEEecCCEEEEee-----cCCeEEeeeecccceeeeecCCCc-----
Confidence 644 55679999999999999999 999999999986554443332211
Q ss_pred ccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC-cEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEe
Q psy15549 353 QYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN-NILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASS 431 (621)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s 431 (621)
....+++..| .|..+++|+.|. .|++|++.+|+.+-.+ .||.++|.+++|+|+|..|+++|
T Consensus 436 -~QfscvavD~----------------sGelV~AG~~d~F~IfvWS~qTGqllDiL-sGHEgPVs~l~f~~~~~~LaS~S 497 (893)
T KOG0291|consen 436 -IQFSCVAVDP----------------SGELVCAGAQDSFEIFVWSVQTGQLLDIL-SGHEGPVSGLSFSPDGSLLASGS 497 (893)
T ss_pred -eeeeEEEEcC----------------CCCEEEeeccceEEEEEEEeecCeeeehh-cCCCCcceeeEEccccCeEEecc
Confidence 1112222222 467777777776 8999999999999888 67999999999999999999999
Q ss_pred CCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 432 TDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 432 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
.|.+|++|++-...-...-......+..+.|+|+|+.++.+..||++..|+...
T Consensus 498 WDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~ 551 (893)
T KOG0291|consen 498 WDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKE 551 (893)
T ss_pred ccceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhh
Confidence 999999999986543333334556788899999999999999999999998543
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=275.85 Aligned_cols=292 Identities=18% Similarity=0.283 Sum_probs=246.1
Q ss_pred eEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEcCCceEEEEec
Q psy15549 31 YRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLT 110 (621)
Q Consensus 31 ~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~ 110 (621)
-+||+++.|.+|| +|...++.+... +....+.|+.++..||+++||+++...|++||+.
T Consensus 11 viLvsA~YDhTIR--------------fWqa~tG~C~rT-------iqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~ 69 (311)
T KOG0315|consen 11 VILVSAGYDHTIR--------------FWQALTGICSRT-------IQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLN 69 (311)
T ss_pred eEEEeccCcceee--------------eeehhcCeEEEE-------EecCccceeeEEEcCCcchhhhccCCeeEEEEcc
Confidence 4899999999999 999988887554 6767889999999999999999999999999999
Q ss_pred cCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecC
Q psy15549 111 ERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRG 190 (621)
Q Consensus 111 ~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (621)
.... .++..+.+|+..|+++.|..+|+.+++|++||+++|||++...+ .....
T Consensus 70 S~np-----~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~----------------------qR~~~ 122 (311)
T KOG0315|consen 70 SNNP-----NPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSC----------------------QRNYQ 122 (311)
T ss_pred CCCC-----CceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCccc----------------------chhcc
Confidence 8753 47888999999999999999999999999999999999998654 33446
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceee
Q psy15549 191 HLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT-EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVI 269 (621)
Q Consensus 191 ~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 269 (621)
|.++|+++..+|+...|++|..+|.|++||+....+...+. .....|+++...|||.+|+.+...|...+|++-..+..
T Consensus 123 ~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~ 202 (311)
T KOG0315|consen 123 HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTA 202 (311)
T ss_pred CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCcc
Confidence 88999999999999999999999999999999887766654 34568999999999999999999999999999774433
Q ss_pred eecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceec
Q psy15549 270 SRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCL 349 (621)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~ 349 (621)
..+ .|+-....+.+.+..+.+|||+++|++++
T Consensus 203 s~l-----------------~P~~k~~ah~~~il~C~lSPd~k~lat~s------------------------------- 234 (311)
T KOG0315|consen 203 SEL-----------------EPVHKFQAHNGHILRCLLSPDVKYLATCS------------------------------- 234 (311)
T ss_pred ccc-----------------eEhhheecccceEEEEEECCCCcEEEeec-------------------------------
Confidence 222 22333456677888899999999888877
Q ss_pred CCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC-ceeEEEecccccceEEEEEcCCCCeEE
Q psy15549 350 PSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA-SPFAFIANIHYTKLTDITWSSDGKVLI 428 (621)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~h~~~v~~~~~spdg~~l~ 428 (621)
.|.+++||+.++. +....+ .+|...+++++||.||+||+
T Consensus 235 ---------------------------------------sdktv~iwn~~~~~kle~~l-~gh~rWvWdc~FS~dg~Ylv 274 (311)
T KOG0315|consen 235 ---------------------------------------SDKTVKIWNTDDFFKLELVL-TGHQRWVWDCAFSADGEYLV 274 (311)
T ss_pred ---------------------------------------CCceEEEEecCCceeeEEEe-ecCCceEEeeeeccCccEEE
Confidence 5666777777666 223333 57999999999999999999
Q ss_pred EEeCCCcEEEEEecCCcCCcccCCCCCccc
Q psy15549 429 ASSTDGYCSIISFGDNEIGIPYVPPSGEES 458 (621)
Q Consensus 429 s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~ 458 (621)
||+.|+.+++|++..++..+.+.+|.....
T Consensus 275 Tassd~~~rlW~~~~~k~v~qy~gh~K~~v 304 (311)
T KOG0315|consen 275 TASSDHTARLWDLSAGKEVRQYQGHHKAAV 304 (311)
T ss_pred ecCCCCceeecccccCceeeecCCcccccE
Confidence 999999999999999998888888655443
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=317.62 Aligned_cols=410 Identities=18% Similarity=0.251 Sum_probs=333.4
Q ss_pred cCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEc
Q psy15549 11 HNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 90 (621)
Q Consensus 11 ~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 90 (621)
.|..||.-++|+|.+. .|++|+.||.|+ +||+..+..... |+||.+.|.++.|+
T Consensus 103 ~He~Pvi~ma~~~~g~-----LlAtggaD~~v~--------------VWdi~~~~~th~-------fkG~gGvVssl~F~ 156 (775)
T KOG0319|consen 103 IHEAPVITMAFDPTGT-----LLATGGADGRVK--------------VWDIKNGYCTHS-------FKGHGGVVSSLLFH 156 (775)
T ss_pred ccCCCeEEEEEcCCCc-----eEEeccccceEE--------------EEEeeCCEEEEE-------ecCCCceEEEEEeC
Confidence 4899999999999998 999999999999 999998877555 99999999999999
Q ss_pred cCCC--EEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 91 PNGE--LLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 91 pdg~--~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
|+-. .|++|. |+.+++|++.... .++..+..|...|++++|++|+.-+++++.|..+.|||+.+.+....+
T Consensus 157 ~~~~~~lL~sg~~D~~v~vwnl~~~~------tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~l 230 (775)
T KOG0319|consen 157 PHWNRWLLASGATDGTVRVWNLNDKR------TCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTL 230 (775)
T ss_pred CccchhheeecCCCceEEEEEcccCc------hHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhhee
Confidence 9754 467776 8889999999653 457888999999999999999999999999999999998766555443
Q ss_pred CCCC--------------------------------------------cccccc------------------------cc
Q psy15549 168 PSSN--------------------------------------------LDEENV------------------------NK 179 (621)
Q Consensus 168 ~~~~--------------------------------------------~~~~~~------------------------~~ 179 (621)
+.-+ ...... ..
T Consensus 231 p~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~ 310 (775)
T KOG0319|consen 231 PLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDE 310 (775)
T ss_pred chhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEc
Confidence 2110 000000 01
Q ss_pred cceeeeeeecCCCCCeEEEEEC-CCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcE
Q psy15549 180 EHWIVTKILRGHLEDVYDISWS-PTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSL 258 (621)
Q Consensus 180 ~~~~~~~~~~~~~~~v~~i~~s-pd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i 258 (621)
....+.+.+.|....|..++|- |+.++|+++++.+.+++|++.+..+. .+.+|...|.++....+|.+|++|+.|.++
T Consensus 311 ~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~sv 389 (775)
T KOG0319|consen 311 DELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSV 389 (775)
T ss_pred cccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceE
Confidence 1222334455667778888874 56789999999999999999887775 788999999999966778899999999999
Q ss_pred EEEEccCce----eeeecccCCCCCCCcc-----------ccccccccccc------------------cCCcccceeee
Q psy15549 259 RTYSIQSKK----VISRACRSKLPVDSSH-----------ELFDKVVPLFH------------------DDTMKSFFRRL 305 (621)
Q Consensus 259 ~iwd~~~~~----~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~------------------~~~~~~~i~~~ 305 (621)
++|.+..+. ++....+|...+.... ...|....+|. ...|...|+++
T Consensus 390 ilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~V 469 (775)
T KOG0319|consen 390 ILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCV 469 (775)
T ss_pred EEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccce
Confidence 999874332 2333333333221110 00122333332 23356679999
Q ss_pred eecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEE
Q psy15549 306 TFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVI 385 (621)
Q Consensus 306 ~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 385 (621)
+++|+.+++++++ .|.+.++|++.. ......+.+|...+.++.|+| .+..++
T Consensus 470 aia~ndkLiAT~S-----qDktaKiW~le~-------~~l~~vLsGH~RGvw~V~Fs~----------------~dq~la 521 (775)
T KOG0319|consen 470 AIAPNDKLIATGS-----QDKTAKIWDLEQ-------LRLLGVLSGHTRGVWCVSFSK----------------NDQLLA 521 (775)
T ss_pred EecCCCceEEecc-----cccceeeecccC-------ceEEEEeeCCccceEEEEecc----------------ccceeE
Confidence 9999999999999 999999999873 344567889999999999998 567899
Q ss_pred EEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCC
Q psy15549 386 AVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTK 465 (621)
Q Consensus 386 ~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (621)
+++.|.+|+||.+.+..++.++ .||...|..+.|-.+|+.|++|+.||-|++|+++++++...+..|...+.....++.
T Consensus 522 T~SgD~TvKIW~is~fSClkT~-eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~ 600 (775)
T KOG0319|consen 522 TCSGDKTVKIWSISTFSCLKTF-EGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPL 600 (775)
T ss_pred eccCCceEEEEEeccceeeeee-cCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCc
Confidence 9999999999999999999999 579999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCcccHHHhc
Q psy15549 466 GEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 466 ~~~~~s~~~~~~~~~w~ 482 (621)
+..+++++.|+.+.+|.
T Consensus 601 ~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 601 LDMFVTGGGDGRIIFWK 617 (775)
T ss_pred cceeEecCCCeEEEEee
Confidence 99999999999999997
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=297.09 Aligned_cols=340 Identities=18% Similarity=0.309 Sum_probs=277.5
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccc-cceeecc--ccccc----c
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGI-ANVEFAS--DLSRH----Q 81 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~-~~~~~~~--~~~~h----~ 81 (621)
...|+.+|.+.+|+|-.. -.|++|+.|-..+ +|++....... ....+.. .+.++ .
T Consensus 174 vl~~~~~V~~~~WnP~~~----~llasg~~~s~ar--------------i~~l~e~~~~~~~q~~lrh~~~~~~~s~~~n 235 (524)
T KOG0273|consen 174 VLRHESEVFICAWNPLRD----GLLASGSGDSTAR--------------IWNLLENSNIGSTQLVLRHCIREGGKSVPSN 235 (524)
T ss_pred eccCCCceEEEecCchhh----hhhhccCCcccee--------------eeeehhhccccchhhhhhhhhhhhcccCCcc
Confidence 334999999999999764 3899999999999 77776411110 0011111 11122 3
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
..|++++|+.+|.+||+|+ ++.++||+... ..+..+..|.++|.++.|+..|.||++++.|+++.+||..+
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~G--------~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~ 307 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSEDGEARIWNKDG--------NLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHT 307 (524)
T ss_pred CCcceEEecCCCCeEEEeecCcEEEEEecCc--------hhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccC
Confidence 5799999999999999999 88899999876 56788899999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 240 (621)
+... +.+.-|..+-..+.|-.+ .-+++++.|+.|+|+.+....++.++.+|.+.|.++
T Consensus 308 g~~~---------------------q~f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~al 365 (524)
T KOG0273|consen 308 GTVK---------------------QQFEFHSAPALDVDWQSN-DEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNAL 365 (524)
T ss_pred ceEE---------------------EeeeeccCCccceEEecC-ceEeecCCCceEEEEEecCCCcceeeecccCceEEE
Confidence 8753 555667777678888754 468899999999999999999999999999999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 241 AWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 241 ~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
.|+|.|..|++++.|++++||.+........+. .|...|..+.|+|+|...-..
T Consensus 366 k~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~-----------------------~Hskei~t~~wsp~g~v~~n~--- 419 (524)
T KOG0273|consen 366 KWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQ-----------------------AHSKEIYTIKWSPTGPVTSNP--- 419 (524)
T ss_pred EECCCCceEEEecCCCeeEeeecCCCcchhhhh-----------------------hhccceeeEeecCCCCccCCC---
Confidence 999999999999999999999987776655554 344567889999988632110
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
..+..+++++.|++|++||+..
T Consensus 420 ----------------------------------------------------------~~~~~l~sas~dstV~lwdv~~ 441 (524)
T KOG0273|consen 420 ----------------------------------------------------------NMNLMLASASFDSTVKLWDVES 441 (524)
T ss_pred ----------------------------------------------------------cCCceEEEeecCCeEEEEEccC
Confidence 1346688999999999999999
Q ss_pred CceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHH
Q psy15549 401 ASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQ 480 (621)
Q Consensus 401 ~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 480 (621)
+.++..+. .|..+|.+++|||+|++||+|+.||.|.+|+..++++.+.+.... .+..+.|+.+|..+.....++.+.+
T Consensus 442 gv~i~~f~-kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~-~Ifel~Wn~~G~kl~~~~sd~~vcv 519 (524)
T KOG0273|consen 442 GVPIHTLM-KHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGTG-GIFELCWNAAGDKLGACASDGSVCV 519 (524)
T ss_pred CceeEeec-cCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCCC-eEEEEEEcCCCCEEEEEecCCCceE
Confidence 99999985 599999999999999999999999999999999999998887755 3667778888877776666766655
Q ss_pred hc
Q psy15549 481 AK 482 (621)
Q Consensus 481 w~ 482 (621)
-+
T Consensus 520 ld 521 (524)
T KOG0273|consen 520 LD 521 (524)
T ss_pred EE
Confidence 43
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-40 Score=296.54 Aligned_cols=283 Identities=25% Similarity=0.416 Sum_probs=246.9
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
+-+|..|.|.|+|+ +|++|+..|.+. +|+.. .+.+...+..|..+|.++.|+++
T Consensus 96 kc~V~~v~WtPeGR-----RLltgs~SGEFt--------------LWNg~-------~fnFEtilQaHDs~Vr~m~ws~~ 149 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGR-----RLLTGSQSGEFT--------------LWNGT-------SFNFETILQAHDSPVRTMKWSHN 149 (464)
T ss_pred ccceeeEEEcCCCc-----eeEeecccccEE--------------EecCc-------eeeHHHHhhhhcccceeEEEccC
Confidence 44899999999999 999999999999 88764 23334457899999999999999
Q ss_pred CCEEEEEc-CCceEEEEeccCccccccceecccccccC-CCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 93 GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQ-KAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 93 g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
|.++++|+ ++.|++|+.... .+..+.+|. ..|++++|+|+...|++|+.||+|+|||....+.-
T Consensus 150 g~wmiSgD~gG~iKyWqpnmn--------nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee------ 215 (464)
T KOG0284|consen 150 GTWMISGDKGGMIKYWQPNMN--------NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEE------ 215 (464)
T ss_pred CCEEEEcCCCceEEecccchh--------hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchh------
Confidence 99999999 777899998764 345555555 89999999999999999999999999999877753
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEE
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVA 250 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~ 250 (621)
..+.+|.-.|.+++|+|...+|++|+.|..|++||.+++.++.++..|...|..+.|+|++++|+
T Consensus 216 ---------------~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Ll 280 (464)
T KOG0284|consen 216 ---------------RVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLL 280 (464)
T ss_pred ---------------heeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeE
Confidence 56789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcc
Q psy15549 251 TLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKP 330 (621)
Q Consensus 251 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~ 330 (621)
+++.|..+++||+++.+.+..+. .|+..++++.|+|-..-|
T Consensus 281 t~skD~~~kv~DiR~mkEl~~~r-----------------------~Hkkdv~~~~WhP~~~~l---------------- 321 (464)
T KOG0284|consen 281 TGSKDQSCKVFDIRTMKELFTYR-----------------------GHKKDVTSLTWHPLNESL---------------- 321 (464)
T ss_pred EccCCceEEEEehhHhHHHHHhh-----------------------cchhhheeeccccccccc----------------
Confidence 99999999999999777665554 344556788888865433
Q ss_pred eeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecc
Q psy15549 331 ISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANI 410 (621)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 410 (621)
|.+++.||.|..|.+...+++..+..+
T Consensus 322 -----------------------------------------------------ftsgg~Dgsvvh~~v~~~~p~~~i~~A 348 (464)
T KOG0284|consen 322 -----------------------------------------------------FTSGGSDGSVVHWVVGLEEPLGEIPPA 348 (464)
T ss_pred -----------------------------------------------------eeeccCCCceEEEeccccccccCCCcc
Confidence 444567899999999888888888889
Q ss_pred cccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 411 HYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 411 h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
|...|++++|+|-|..|++|+.|.++++|.-.
T Consensus 349 Hd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 349 HDGEIWSLAYHPLGHILATGSNDRTVRFWTRN 380 (464)
T ss_pred cccceeeeeccccceeEeecCCCcceeeeccC
Confidence 99999999999999999999999999999854
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=267.41 Aligned_cols=295 Identities=21% Similarity=0.364 Sum_probs=238.3
Q ss_pred cccceeeecCCCCeEEEecccc-ccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccc-ccc
Q psy15549 3 CTIPEISWHNRDPVLSVDIQLK-QEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDL-SRH 80 (621)
Q Consensus 3 ~~~~~~~~~h~~~v~~l~~spd-~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~-~~h 80 (621)
+.....+.+|++.|..+||+|- |. .||+|+.|..|+ ||+...+.. +.....+ .+|
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~g~-----ilAscg~Dk~vr--------------iw~~~~~~s----~~ck~vld~~h 60 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGKGV-----ILASCGTDKAVR--------------IWSTSSGDS----WTCKTVLDDGH 60 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCCce-----EEEeecCCceEE--------------EEecCCCCc----EEEEEeccccc
Confidence 4456678889999999999998 76 999999999999 888775221 2222223 479
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEcc
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
+..|++++|+|.|++||+|+ |..+.||.-..+ .++.+..+.||...|.+++|+++|.+||+|+.|..|-||.+.
T Consensus 61 krsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~-----efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~d 135 (312)
T KOG0645|consen 61 KRSVRSVAWSPHGRYLASASFDATVVIWKKEDG-----EFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEID 135 (312)
T ss_pred hheeeeeeecCCCcEEEEeeccceEEEeecCCC-----ceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEec
Confidence 99999999999999999999 999999998866 558899999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC---CCcEEEEeccCCcc
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH---KGKNLGILTEHKKF 236 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~---~~~~~~~~~~~~~~ 236 (621)
..... .+...+..|...|..+.|+|...+|++++.|.+|++|+-. .-.+++++.+|...
T Consensus 136 eddEf------------------ec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~T 197 (312)
T KOG0645|consen 136 EDDEF------------------ECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENT 197 (312)
T ss_pred CCCcE------------------EEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccce
Confidence 66542 3458899999999999999999999999999999999866 34688999999999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
|.+++|++.|..|++++.|++++||...+.-. ..+...+..+.|. .
T Consensus 198 VW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~~---------------------------~~~sr~~Y~v~W~--~----- 243 (312)
T KOG0645|consen 198 VWSLAFDNIGSRLVSCSDDGTVSIWRLYTDLS---------------------------GMHSRALYDVPWD--N----- 243 (312)
T ss_pred EEEEEecCCCceEEEecCCcceEeeeeccCcc---------------------------hhcccceEeeeec--c-----
Confidence 99999999999999999999999998652110 1122334555555 2
Q ss_pred ccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEE
Q psy15549 317 PSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLY 396 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw 396 (621)
+.|++++.|+.|++|
T Consensus 244 -----------------------------------------------------------------~~IaS~ggD~~i~lf 258 (312)
T KOG0645|consen 244 -----------------------------------------------------------------GVIASGGGDDAIRLF 258 (312)
T ss_pred -----------------------------------------------------------------cceEeccCCCEEEEE
Confidence 234445566666666
Q ss_pred eCCCC------ceeEEEecccccceEEEEEcCC-CCeEEEEeCCCcEEEEEec
Q psy15549 397 DTQHA------SPFAFIANIHYTKLTDITWSSD-GKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 397 d~~~~------~~~~~~~~~h~~~v~~~~~spd-g~~l~s~s~dg~i~iw~~~ 442 (621)
..... +.+......|...|++++|.|. ..+|++|++||.|++|.+.
T Consensus 259 ~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 259 KESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred EecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 54432 1222233468899999999995 6689999999999999875
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=276.56 Aligned_cols=338 Identities=16% Similarity=0.253 Sum_probs=278.1
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
....|+++|.+++.+|+.+ ++|||+.|..-. ||+..+++... .+.+|++.|+++
T Consensus 59 tF~~H~~svFavsl~P~~~-----l~aTGGgDD~Af--------------lW~~~~ge~~~-------eltgHKDSVt~~ 112 (399)
T KOG0296|consen 59 TFDKHTDSVFAVSLHPNNN-----LVATGGGDDLAF--------------LWDISTGEFAG-------ELTGHKDSVTCC 112 (399)
T ss_pred ehhhcCCceEEEEeCCCCc-----eEEecCCCceEE--------------EEEccCCccee-------EecCCCCceEEE
Confidence 3456999999999999887 999999999998 99999887543 489999999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
.||.||.+||+|+ ++.|+||...++. ....+...-..|.-+.|+|.+..|+.|+.||.+.+|.+.++..
T Consensus 113 ~FshdgtlLATGdmsG~v~v~~~stg~-------~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~--- 182 (399)
T KOG0296|consen 113 SFSHDGTLLATGDMSGKVLVFKVSTGG-------EQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQAL--- 182 (399)
T ss_pred EEccCceEEEecCCCccEEEEEcccCc-------eEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcce---
Confidence 9999999999999 9999999999874 3333434456788899999999999999999999999998753
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC-CcceEEEEEcCC
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH-KKFVQGVAWDPK 245 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~v~~l~~sp~ 245 (621)
.+.+.+|..++++=.|.|+|+.++++..||+|++||+.+++++..+... .....++.++..
T Consensus 183 ------------------~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~ 244 (399)
T KOG0296|consen 183 ------------------CKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLA 244 (399)
T ss_pred ------------------eeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccc
Confidence 3778899999999999999999999999999999999999999888632 345778999999
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCC
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSD 325 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d 325 (621)
+..++.|+.++.+++-...+++.+............ ........|.++.|+..=.+.|+++ .|
T Consensus 245 ~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~------------~~e~~~esve~~~~ss~lpL~A~G~-----vd 307 (399)
T KOG0296|consen 245 GSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKP------------SQEELDESVESIPSSSKLPLAACGS-----VD 307 (399)
T ss_pred cceeEeccCCccEEEEccccceEEEecCCCCccccc------------cchhhhhhhhhcccccccchhhccc-----cc
Confidence 999999999999999999999988776531111100 0111122344555566667778888 99
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA 405 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 405 (621)
+++.+|++.....+. .-.|...+..+.|-+ ..+|++++.+|.|++||.++|+.+.
T Consensus 308 G~i~iyD~a~~~~R~--------~c~he~~V~~l~w~~-----------------t~~l~t~c~~g~v~~wDaRtG~l~~ 362 (399)
T KOG0296|consen 308 GTIAIYDLAASTLRH--------ICEHEDGVTKLKWLN-----------------TDYLLTACANGKVRQWDARTGQLKF 362 (399)
T ss_pred ceEEEEecccchhhe--------eccCCCceEEEEEcC-----------------cchheeeccCceEEeeeccccceEE
Confidence 999999987533222 223445566666654 3679999999999999999999999
Q ss_pred EEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 406 FIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 406 ~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
.+ .+|...|.+++++|++++++|+|.|++.+||+..
T Consensus 363 ~y-~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 363 TY-TGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EE-ecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 88 5799999999999999999999999999999864
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=309.16 Aligned_cols=418 Identities=17% Similarity=0.211 Sum_probs=325.3
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccc-ccCcEEEEEEc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSR-HQKAVNVVRFS 90 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~s 90 (621)
-.+.|+++++.||++ +|++++..+.++ +|++.+++... .++. |.++|.-++|+
T Consensus 61 d~d~ita~~l~~d~~-----~L~~a~rs~llr--------------v~~L~tgk~ir-------swKa~He~Pvi~ma~~ 114 (775)
T KOG0319|consen 61 DEDEITALALTPDEE-----VLVTASRSQLLR--------------VWSLPTGKLIR-------SWKAIHEAPVITMAFD 114 (775)
T ss_pred chhhhheeeecCCcc-----EEEEeeccceEE--------------EEEcccchHhH-------hHhhccCCCeEEEEEc
Confidence 355799999999998 999999999999 99998885543 4777 99999999999
Q ss_pred cCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCC--EEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 91 PNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE--LLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 91 pdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~--~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
|.|.+|++|+ |+.++|||+..+ ...+.+.||.+.|.++.|+|+-+ .|++|..|+++++||+.....
T Consensus 115 ~~g~LlAtggaD~~v~VWdi~~~-------~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~t---- 183 (775)
T KOG0319|consen 115 PTGTLLATGGADGRVKVWDIKNG-------YCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRT---- 183 (775)
T ss_pred CCCceEEeccccceEEEEEeeCC-------EEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCch----
Confidence 9999999998 999999999988 88999999999999999999654 689999999999999997654
Q ss_pred CCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC--
Q psy15549 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK-- 245 (621)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~-- 245 (621)
....+..|.+.|++++|++|+..+++++.|..+.|||+.+.+...++. -...+.++.+-++
T Consensus 184 ----------------cl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp-~ye~~E~vv~l~~~~ 246 (775)
T KOG0319|consen 184 ----------------CLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLP-LYESLESVVRLREEL 246 (775)
T ss_pred ----------------HHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheec-hhhheeeEEEechhc
Confidence 125678899999999999999999999999999999998777776664 3345777777776
Q ss_pred ---CCEEEEEeCCCcEEEEEccCceeeeecccCCCCC-------CCcccc-----------c------------------
Q psy15549 246 ---NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPV-------DSSHEL-----------F------------------ 286 (621)
Q Consensus 246 ---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------~~~~~~-----------~------------------ 286 (621)
+.++++++.+|.+++||..+++++........+. ...+.. .
T Consensus 247 ~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI 326 (775)
T KOG0319|consen 247 GGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEI 326 (775)
T ss_pred CCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhh
Confidence 6799999999999999999887766554442110 000000 0
Q ss_pred ------------------cccccccc--------cCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeec
Q psy15549 287 ------------------DKVVPLFH--------DDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRA 340 (621)
Q Consensus 287 ------------------~~~~~~~~--------~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~ 340 (621)
.....++. ...|...|.++....+|-+|++++ .|.++++|.+.. ..
T Consensus 327 ~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~s-----KD~svilWr~~~---~~ 398 (775)
T KOG0319|consen 327 LDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGS-----KDKSVILWRLNN---NC 398 (775)
T ss_pred eeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEec-----CCceEEEEEecC---Cc
Confidence 00111111 123444466777667778899988 899999998721 11
Q ss_pred ccCCCceecCCcccceeeeeccce----eeecCCC--------------------------------CCCCCccCCCcEE
Q psy15549 341 CLNKPAVCLPSLQYYSVAVKCCPV----LFELKPS--------------------------------DDKPLFKLPYRIV 384 (621)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--------------------------------~~~~~~~~~~~~l 384 (621)
..........+|...+.++.++.. +...+.+ -+.....+++..+
T Consensus 399 ~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLi 478 (775)
T KOG0319|consen 399 SKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLI 478 (775)
T ss_pred chhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceE
Confidence 122233344556555555544321 1011110 0122345577888
Q ss_pred EEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCC
Q psy15549 385 IAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPT 464 (621)
Q Consensus 385 ~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (621)
++++.|.+.+||++........+ .+|...|.++.|+|..+.|+|+|.|++|+||.+.+..++.++.+|...+....|..
T Consensus 479 AT~SqDktaKiW~le~~~l~~vL-sGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~ 557 (775)
T KOG0319|consen 479 ATGSQDKTAKIWDLEQLRLLGVL-SGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIR 557 (775)
T ss_pred EecccccceeeecccCceEEEEe-eCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeee
Confidence 99999999999999988888877 57999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCcccHHHhcccC-ccccccc
Q psy15549 465 KGEPVRSEDKPRSAEQAKGEG-KVLGEKQ 492 (621)
Q Consensus 465 ~~~~~~s~~~~~~~~~w~~~~-~~~~~~~ 492 (621)
+|+.++|++.||-+++|+... ..+.++.
T Consensus 558 ~~~qliS~~adGliKlWnikt~eC~~tlD 586 (775)
T KOG0319|consen 558 NGKQLISAGADGLIKLWNIKTNECEMTLD 586 (775)
T ss_pred CCcEEEeccCCCcEEEEeccchhhhhhhh
Confidence 999999999999999999543 3444443
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=271.08 Aligned_cols=292 Identities=18% Similarity=0.277 Sum_probs=245.9
Q ss_pred eeccccccccCcEEEEEEccCC-CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC
Q psy15549 72 EFASDLSRHQKAVNVVRFSPNG-ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD 149 (621)
Q Consensus 72 ~~~~~~~~h~~~V~~l~~spdg-~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~ 149 (621)
.+..++.+|.+.|+.++..+.+ ..|++++ |..+.+|++...... .....+.+.||...|..+..+++|++.++++.
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~--~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw 83 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIK--YGVPVRRLTGHSHFVSDVVLSSDGNFALSASW 83 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccc--cCceeeeeeccceEecceEEccCCceEEeccc
Confidence 3456789999999999999874 5667777 888999999876332 22557789999999999999999999999999
Q ss_pred CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Q psy15549 150 ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI 229 (621)
Q Consensus 150 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~ 229 (621)
|+++++||+.+++. .+.+.+|...|.+++|++|.+.+++|+.|.+|++|++- +.+..+
T Consensus 84 D~~lrlWDl~~g~~---------------------t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t 141 (315)
T KOG0279|consen 84 DGTLRLWDLATGES---------------------TRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYT 141 (315)
T ss_pred cceEEEEEecCCcE---------------------EEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec-ccEEEE
Confidence 99999999999864 37789999999999999999999999999999999985 555555
Q ss_pred eccC--CcceEEEEEcCC--CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeee
Q psy15549 230 LTEH--KKFVQGVAWDPK--NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL 305 (621)
Q Consensus 230 ~~~~--~~~v~~l~~sp~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 305 (621)
+..+ ...|.|+.|+|+ ..+|++++.|++|++||+++.+....+. .+.+.++.+
T Consensus 142 ~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~-----------------------gh~~~v~t~ 198 (315)
T KOG0279|consen 142 IHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFI-----------------------GHSGYVNTV 198 (315)
T ss_pred EecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccc-----------------------cccccEEEE
Confidence 5444 788999999998 6889999999999999999988776664 345667899
Q ss_pred eecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEE
Q psy15549 306 TFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVI 385 (621)
Q Consensus 306 ~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 385 (621)
++||||..+++++
T Consensus 199 ~vSpDGslcasGg------------------------------------------------------------------- 211 (315)
T KOG0279|consen 199 TVSPDGSLCASGG------------------------------------------------------------------- 211 (315)
T ss_pred EECCCCCEEecCC-------------------------------------------------------------------
Confidence 9999998887755
Q ss_pred EEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCC---------c
Q psy15549 386 AVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSG---------E 456 (621)
Q Consensus 386 ~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~---------~ 456 (621)
.||.+.+||+..++.+..+ .|...|.+++|+|+.-+|+.+ .+..|+|||++++.++..+..... .
T Consensus 212 ---kdg~~~LwdL~~~k~lysl--~a~~~v~sl~fspnrywL~~a-t~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~ 285 (315)
T KOG0279|consen 212 ---KDGEAMLWDLNEGKNLYSL--EAFDIVNSLCFSPNRYWLCAA-TATSIKIWDLESKAVVEELKLDGIGPSSKAGDPI 285 (315)
T ss_pred ---CCceEEEEEccCCceeEec--cCCCeEeeEEecCCceeEeec-cCCceEEEeccchhhhhhccccccccccccCCcE
Confidence 6899999999999998887 388999999999997666665 556699999999988777655322 2
Q ss_pred ccccCCCCCCCCcccCCCcccHHHhcc
Q psy15549 457 ESKENDPTKGEPVRSEDKPRSAEQAKG 483 (621)
Q Consensus 457 ~~~~~~~~~~~~~~s~~~~~~~~~w~~ 483 (621)
-...+++.+|..+.++-.++.|++|.+
T Consensus 286 clslaws~dG~tLf~g~td~~irv~qv 312 (315)
T KOG0279|consen 286 CLSLAWSADGQTLFAGYTDNVIRVWQV 312 (315)
T ss_pred EEEEEEcCCCcEEEeeecCCcEEEEEe
Confidence 344589999999999999999999975
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=295.83 Aligned_cols=421 Identities=15% Similarity=0.185 Sum_probs=338.3
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
+...+...|.+++.||+|. +|++....|... +-++........ ...+.+|.|+
T Consensus 50 l~~e~~~NI~~ialSp~g~-----lllavdE~g~~~--------------lvs~~~r~Vlh~--------f~fk~~v~~i 102 (893)
T KOG0291|consen 50 LPLETRYNITRIALSPDGT-----LLLAVDERGRAL--------------LVSLLSRSVLHR--------FNFKRGVGAI 102 (893)
T ss_pred EEeecCCceEEEEeCCCce-----EEEEEcCCCcEE--------------EEecccceeeEE--------EeecCccceE
Confidence 4455677899999999998 899999998886 555443322111 1235789999
Q ss_pred EEccCCCEEEEEcCCceEEEEeccCcc-ccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGDDVGKEIWYLTERES-GIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~d~~v~iw~~~~~~~-~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
.|||+|+++|.|..+-+.||.....-. ....+...+++.+|...|.++.|+.|.++|++|+.|-++++|.++..+...
T Consensus 103 ~fSPng~~fav~~gn~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~- 181 (893)
T KOG0291|consen 103 KFSPNGKFFAVGCGNLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLF- 181 (893)
T ss_pred EECCCCcEEEEEecceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccccc-
Confidence 999999999999999999999876544 455667778889999999999999999999999999999999998877632
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-----------------------
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK----------------------- 223 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~----------------------- 223 (621)
...+.+|...|.++-|..+...+++.+.||.+.+|....
T Consensus 182 ------------------~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~ 243 (893)
T KOG0291|consen 182 ------------------TYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDED 243 (893)
T ss_pred ------------------eEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCccccccccccccccccccccc
Confidence 356789999999999999999999999999999997651
Q ss_pred CcE-----------EEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccc-------
Q psy15549 224 GKN-----------LGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHEL------- 285 (621)
Q Consensus 224 ~~~-----------~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~------- 285 (621)
++. ..-+......|++.+|++..+.|++|-..|...+|++....+++.+.....++....-.
T Consensus 244 ~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA 323 (893)
T KOG0291|consen 244 GEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIA 323 (893)
T ss_pred chhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEE
Confidence 111 11122234679999999999999999999999999999999988887665554321100
Q ss_pred -------------ccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCc
Q psy15549 286 -------------FDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSL 352 (621)
Q Consensus 286 -------------~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~ 352 (621)
.....-+.....|-..+.+++++|||+++++++ .|+.+++|+....+.. ..+..|
T Consensus 324 ~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~-----eDgKVKvWn~~SgfC~-------vTFteH 391 (893)
T KOG0291|consen 324 FGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGA-----EDGKVKVWNTQSGFCF-------VTFTEH 391 (893)
T ss_pred EcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEecc-----CCCcEEEEeccCceEE-------EEeccC
Confidence 011112224455677899999999999999999 9999999998865443 356678
Q ss_pred ccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeC
Q psy15549 353 QYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASST 432 (621)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~ 432 (621)
...+..+.|.. .++.+++.+-||+|+.||+......+++.....-...+++..|.|..++.|+.
T Consensus 392 ts~Vt~v~f~~----------------~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~ 455 (893)
T KOG0291|consen 392 TSGVTAVQFTA----------------RGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQ 455 (893)
T ss_pred CCceEEEEEEe----------------cCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeecc
Confidence 88888888876 67889999999999999999999999887666667789999999999999987
Q ss_pred CC-cEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhcccCc--cccccc-----cCCCCCCCcc
Q psy15549 433 DG-YCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGK--VLGEKQ-----TGNKVSPTDK 502 (621)
Q Consensus 433 dg-~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~~--~~~~~~-----~~~~~s~~~~ 502 (621)
|. .|++|++++|+++..+.+|.+++..+.|++++..+++++.|.+|++|+.-+. ...+++ ....|.|+++
T Consensus 456 d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~ 533 (893)
T KOG0291|consen 456 DSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGK 533 (893)
T ss_pred ceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCC
Confidence 75 5999999999999999999999999999999999999999999999995443 111221 1667777773
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=278.56 Aligned_cols=287 Identities=21% Similarity=0.335 Sum_probs=260.5
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
-+.+|..+|+.+-|+|+-. .+++++.|++|+ +||..+++... .++||.+.|..+
T Consensus 103 ~l~g~r~~vt~v~~hp~~~-----~v~~as~d~tik--------------v~D~~tg~~e~-------~LrGHt~sv~di 156 (406)
T KOG0295|consen 103 KLAGHRSSVTRVIFHPSEA-----LVVSASEDATIK--------------VFDTETGELER-------SLRGHTDSVFDI 156 (406)
T ss_pred hhhccccceeeeeeccCce-----EEEEecCCceEE--------------EEEccchhhhh-------hhhccccceeEE
Confidence 3456889999999999997 999999999999 99999887644 499999999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
+|+..|++||+++ |-.+++|+.... +..++.+.+|...|.+++|-|.|.+|++++.|.+|+.|++.++.++
T Consensus 157 ~~~a~Gk~l~tcSsDl~~~LWd~~~~------~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv-- 228 (406)
T KOG0295|consen 157 SFDASGKYLATCSSDLSAKLWDFDTF------FRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCV-- 228 (406)
T ss_pred EEecCccEEEecCCccchhheeHHHH------HHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeE--
Confidence 9999999999999 555999999863 3778888999999999999999999999999999999999999876
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC-
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK- 245 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~- 245 (621)
..+.+|..-|..++.+.||.++++++.|.+|++|-+.++++...++.|..+|.+++|.|.
T Consensus 229 -------------------~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~ 289 (406)
T KOG0295|consen 229 -------------------KTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPES 289 (406)
T ss_pred -------------------EeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccc
Confidence 667899999999999999999999999999999999999999999999999999999763
Q ss_pred --------------CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC
Q psy15549 246 --------------NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 246 --------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 311 (621)
++++.+++.|++|++||+.++.++.++. .|..+|++++|+|.|
T Consensus 290 ~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~-----------------------ghdnwVr~~af~p~G 346 (406)
T KOG0295|consen 290 SYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLV-----------------------GHDNWVRGVAFSPGG 346 (406)
T ss_pred cCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEe-----------------------cccceeeeeEEcCCC
Confidence 2589999999999999999999988876 445677999999999
Q ss_pred CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
+||+++. +|+
T Consensus 347 kyi~Sca----------------------------------------------------------------------DDk 356 (406)
T KOG0295|consen 347 KYILSCA----------------------------------------------------------------------DDK 356 (406)
T ss_pred eEEEEEe----------------------------------------------------------------------cCC
Confidence 9988766 789
Q ss_pred cEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 392 NILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 392 ~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
++++||+.+.+++..+. .|..-|+++.|+.+-.+++||+-|.++++|.-
T Consensus 357 tlrvwdl~~~~cmk~~~-ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 357 TLRVWDLKNLQCMKTLE-AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred cEEEEEeccceeeeccC-CCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 99999999999999885 79999999999999999999999999999963
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=278.43 Aligned_cols=374 Identities=49% Similarity=0.854 Sum_probs=311.5
Q ss_pred CccccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccc--cceeeccccc
Q psy15549 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGI--ANVEFASDLS 78 (621)
Q Consensus 1 m~~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~--~~~~~~~~~~ 78 (621)
|+...+++.||...+|+++.|.++.. +.||||+.|..|+ ||.+....... ..++...
T Consensus 1 m~~~~~ei~wH~~~pv~s~dfq~n~~----~~laT~G~D~~ir--------------iW~v~r~~~~~~~~~V~y~s--- 59 (434)
T KOG1009|consen 1 MEAYPIEISWHDHEPVYSVDFQKNSL----NKLATAGGDKDIR--------------IWKVNRSEPGGGDMKVEYLS--- 59 (434)
T ss_pred CCceeeEEEecCCCceEEEEeccCcc----cceecccCcccee--------------eeeeeecCCCCCceeEEEee---
Confidence 88899999999999999999999886 5999999999999 99877554322 1122222
Q ss_pred cccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy15549 79 RHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~ 158 (621)
.+.+|...|+++.|+|+|.+||+|+.+|.|.+|..
T Consensus 60 ---------------------------------------------~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~ 94 (434)
T KOG1009|consen 60 ---------------------------------------------SLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQ 94 (434)
T ss_pred ---------------------------------------------cccCCcceeEEEEEcCCcCeeeecCCCceEEEEEe
Confidence 24456667777777777777777777777777765
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceE
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ 238 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 238 (621)
..-.. +. . ......+.+.|.+.+.+.+|...|+.++|+|+++++++++.|..+++||+..|+....+..|...+.
T Consensus 95 ~~~~~---~~-~-d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvq 169 (434)
T KOG1009|consen 95 GDVRI---FD-A-DTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQ 169 (434)
T ss_pred cCcCC---cc-c-cchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccc
Confidence 43111 10 0 0122334567888999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
.++|.|-++++++-+.|...+.+.+...+.+........+.............+|.++.++...+.++|+|||.+|++.+
T Consensus 170 gvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPa 249 (434)
T KOG1009|consen 170 GVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPA 249 (434)
T ss_pred eeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEccc
Confidence 99999999999999999988999887777666555444444455555667778999999999999999999999999988
Q ss_pred ccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCC-CccCCCcEEEEEEcCCcEEEEe
Q psy15549 319 GCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKP-LFKLPYRIVIAVATENNILLYD 397 (621)
Q Consensus 319 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~dg~i~iwd 397 (621)
+..+. .+.+. .+....+.+..+..|...++........++|+|+.|.+.+..... ++..+++.+++....+.++|||
T Consensus 250 g~~~~-g~~~~-~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyvyd 327 (434)
T KOG1009|consen 250 GLFKV-GGGVF-RNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYVYD 327 (434)
T ss_pred ceeee-CCcee-eceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceEEEec
Confidence 76553 33333 677888899999999999999999999999999999999887755 8899999999999999999999
Q ss_pred CCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCC
Q psy15549 398 TQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIG 447 (621)
Q Consensus 398 ~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~ 447 (621)
..+..++....+.|-..|++++|++||..|+..|.||.+.+..++..++.
T Consensus 328 tq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~elg 377 (434)
T KOG1009|consen 328 TQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWELG 377 (434)
T ss_pred cccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchhcc
Confidence 99999999998899999999999999999999999999999999998887
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=298.13 Aligned_cols=399 Identities=15% Similarity=0.196 Sum_probs=325.9
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCc----------------------------cccccceeEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIP----------------------------HRLKTGKIWY 60 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~----------------------------~~~~~~~iw~ 60 (621)
..+|+..|+++.|+..|. +||+|+.|+.|.+||+-.. .....+++||
T Consensus 103 fngHK~AVt~l~fd~~G~-----rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~Wd 177 (888)
T KOG0306|consen 103 FNGHKAAVTTLKFDKIGT-----RLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWD 177 (888)
T ss_pred ecccccceEEEEEcccCc-----eEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEe
Confidence 346999999999999998 9999999999999998432 1225789999
Q ss_pred eccccccccceeeccccccccCcEEEEEEccCCCEEEEEcCCceEEEEeccC----------------------------
Q psy15549 61 LTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTER---------------------------- 112 (621)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~---------------------------- 112 (621)
+.+..+... .-.|.+.|.++++.+ ...++.+.+..+.+|++...
T Consensus 178 L~tqhCf~T-------hvd~r~Eiw~l~~~~-~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~ 249 (888)
T KOG0306|consen 178 LETQHCFET-------HVDHRGEIWALVLDE-KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREIN 249 (888)
T ss_pred cccceeeeE-------EecccceEEEEEEec-ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeE
Confidence 999887544 788999999999998 34444555999999998211
Q ss_pred --------------------------------------------------------------------------------
Q psy15549 113 -------------------------------------------------------------------------------- 112 (621)
Q Consensus 113 -------------------------------------------------------------------------------- 112 (621)
T Consensus 250 l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~ 329 (888)
T KOG0306|consen 250 LVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVT 329 (888)
T ss_pred EeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEE
Confidence
Q ss_pred -ccccc-c-------------c------------eecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 113 -ESGIA-N-------------V------------EFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 113 -~~~~~-~-------------~------------~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
..... . + .....+.+|...|.+++++.+...+++|+ .+.|++|+..+.+++.
T Consensus 330 ~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciR 408 (888)
T KOG0306|consen 330 PSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIR 408 (888)
T ss_pred ecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeE
Confidence 00000 0 0 00012468999999999999887777776 4689999999999875
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~ 245 (621)
++ ....+.+..|.|.++++++|...|.+.+||+.+...+.++++|.+.|..++.+||
T Consensus 409 Ti-----------------------~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD 465 (888)
T KOG0306|consen 409 TI-----------------------TCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPD 465 (888)
T ss_pred Ee-----------------------ccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCC
Confidence 44 2237899999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccccccc--ccCCcccceeeeeecCCCCeEEeccccccC
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLF--HDDTMKSFFRRLTFSPDGQLLIAPSGCLEN 323 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~spdg~~l~~~s~~~~~ 323 (621)
+..+++|+.|.+|++||+.--.. ..+.... ...+. ..-.....|.++.+||||++|+++-
T Consensus 466 ~~g~vT~saDktVkfWdf~l~~~---~~gt~~k----------~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsL----- 527 (888)
T KOG0306|consen 466 NKGFVTGSADKTVKFWDFKLVVS---VPGTQKK----------VLSLKHTRTLELEDDVLCVSVSPDGKLLAVSL----- 527 (888)
T ss_pred CCceEEecCCcEEEEEeEEEEec---cCcccce----------eeeeccceEEeccccEEEEEEcCCCcEEEEEe-----
Confidence 99999999999999999743211 0000000 00000 1112345679999999999999998
Q ss_pred CCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCce
Q psy15549 324 SDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP 403 (621)
Q Consensus 324 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 403 (621)
-|.++++|.+... .....+.+|..++.++..+| +...+++++.|.+|+||-+.-|.+
T Consensus 528 LdnTVkVyflDtl-------KFflsLYGHkLPV~smDIS~----------------DSklivTgSADKnVKiWGLdFGDC 584 (888)
T KOG0306|consen 528 LDNTVKVYFLDTL-------KFFLSLYGHKLPVLSMDISP----------------DSKLIVTGSADKNVKIWGLDFGDC 584 (888)
T ss_pred ccCeEEEEEecce-------eeeeeecccccceeEEeccC----------------CcCeEEeccCCCceEEeccccchh
Confidence 8999999987653 34456789999999999888 778999999999999999999999
Q ss_pred eEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhcc
Q psy15549 404 FAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKG 483 (621)
Q Consensus 404 ~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~ 483 (621)
-..+. +|...|.++.|-|+...+.+||.||.|+-||-+.-+.++.+.+|...+.+.+..|+|..+++++.|.++++|..
T Consensus 585 HKS~f-AHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~ 663 (888)
T KOG0306|consen 585 HKSFF-AHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWER 663 (888)
T ss_pred hhhhh-cccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeec
Confidence 88885 59999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred cCc
Q psy15549 484 EGK 486 (621)
Q Consensus 484 ~~~ 486 (621)
...
T Consensus 664 tde 666 (888)
T KOG0306|consen 664 TDE 666 (888)
T ss_pred cCc
Confidence 554
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=296.80 Aligned_cols=394 Identities=20% Similarity=0.265 Sum_probs=323.0
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
+.-+..|+|+.-+|+.. +||+|..||.|+ ||+........ ++.+|..+|+++.|
T Consensus 62 ~~~k~evt~l~~~~d~l-----~lAVGYaDGsVq--------------if~~~s~~~~~-------tfngHK~AVt~l~f 115 (888)
T KOG0306|consen 62 LKKKAEVTCLRSSDDIL-----LLAVGYADGSVQ--------------IFSLESEEILI-------TFNGHKAAVTTLKF 115 (888)
T ss_pred hcccceEEEeeccCCcc-----eEEEEecCceEE--------------eeccCCCceee-------eecccccceEEEEE
Confidence 34445899999999997 999999999999 99988764433 48999999999999
Q ss_pred ccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 90 SPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 90 spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
...|..||+|+ |+.|.+||+-.. .-...+.+|...|+..-|..+.++|++++.|+.|++||+.+..+..+.-
T Consensus 116 d~~G~rlaSGskDt~IIvwDlV~E-------~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thv 188 (888)
T KOG0306|consen 116 DKIGTRLASGSKDTDIIVWDLVGE-------EGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHV 188 (888)
T ss_pred cccCceEeecCCCccEEEEEeccc-------eeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEe
Confidence 99999999999 999999999876 4567789999999999999888899999999999999998776643310
Q ss_pred CC-----------------------------------------------------------------C------------
Q psy15549 169 SS-----------------------------------------------------------------N------------ 171 (621)
Q Consensus 169 ~~-----------------------------------------------------------------~------------ 171 (621)
.. .
T Consensus 189 d~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~ 268 (888)
T KOG0306|consen 189 DHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVI 268 (888)
T ss_pred cccceEEEEEEecceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhh
Confidence 00 0
Q ss_pred -------------------------cc-cc---cc----------------------------------------cccce
Q psy15549 172 -------------------------LD-EE---NV----------------------------------------NKEHW 182 (621)
Q Consensus 172 -------------------------~~-~~---~~----------------------------------------~~~~~ 182 (621)
.. .. .. +.-.|
T Consensus 269 e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ 348 (888)
T KOG0306|consen 269 ELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEW 348 (888)
T ss_pred hheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEE
Confidence 00 00 00 00011
Q ss_pred eee---------------eeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC
Q psy15549 183 IVT---------------KILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247 (621)
Q Consensus 183 ~~~---------------~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~ 247 (621)
... -.+.+|...|.++++|.+...+++|+ .+.+++|+..+.++++++.. +.+.+..|-|.++
T Consensus 349 ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~--~y~l~~~Fvpgd~ 425 (888)
T KOG0306|consen 349 YSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITC--GYILASKFVPGDR 425 (888)
T ss_pred EEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEecc--ccEEEEEecCCCc
Confidence 100 23457999999999998887777665 67899999999999999964 3788999999999
Q ss_pred EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCC
Q psy15549 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDST 327 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~ 327 (621)
++++|...|.+.+||+.+...+.++. .|.+.|.+++.+||++.+++++ .|.+
T Consensus 426 ~Iv~G~k~Gel~vfdlaS~~l~Eti~-----------------------AHdgaIWsi~~~pD~~g~vT~s-----aDkt 477 (888)
T KOG0306|consen 426 YIVLGTKNGELQVFDLASASLVETIR-----------------------AHDGAIWSISLSPDNKGFVTGS-----ADKT 477 (888)
T ss_pred eEEEeccCCceEEEEeehhhhhhhhh-----------------------ccccceeeeeecCCCCceEEec-----CCcE
Confidence 99999999999999999887766654 4567789999999999999999 8999
Q ss_pred CcceeeeeeeeecccCCCce-----ecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 328 RKPISVTHVFTRACLNKPAV-----CLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 328 i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
+++|+............... ..-.....+.++.++| ++++++++--|+++.||-+.+-+
T Consensus 478 VkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Sp----------------dgk~LaVsLLdnTVkVyflDtlK 541 (888)
T KOG0306|consen 478 VKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSP----------------DGKLLAVSLLDNTVKVYFLDTLK 541 (888)
T ss_pred EEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcC----------------CCcEEEEEeccCeEEEEEeccee
Confidence 99999987666221111111 1122344566677766 78899999999999999999998
Q ss_pred eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhc
Q psy15549 403 PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 403 ~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~ 482 (621)
....+. ||.-+|.||..|||++.++|||.|.+|++|-++=|++-..+.+|...+..+.|-|+.....+++.|+-++.|+
T Consensus 542 FflsLY-GHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWD 620 (888)
T KOG0306|consen 542 FFLSLY-GHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWD 620 (888)
T ss_pred eeeeec-ccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeec
Confidence 888885 6999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred cc
Q psy15549 483 GE 484 (621)
Q Consensus 483 ~~ 484 (621)
.+
T Consensus 621 g~ 622 (888)
T KOG0306|consen 621 GE 622 (888)
T ss_pred hh
Confidence 54
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-38 Score=278.99 Aligned_cols=304 Identities=17% Similarity=0.250 Sum_probs=267.7
Q ss_pred eccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC
Q psy15549 73 FASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES 151 (621)
Q Consensus 73 ~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg 151 (621)
+...+.+|...|+.+-|+|+-.++++++ |.+|++||..++ +....+++|...|..++|+..|++|++|+.|-
T Consensus 100 l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg-------~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl 172 (406)
T KOG0295|consen 100 LVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETG-------ELERSLRGHTDSVFDISFDASGKYLATCSSDL 172 (406)
T ss_pred chhhhhccccceeeeeeccCceEEEEecCCceEEEEEccch-------hhhhhhhccccceeEEEEecCccEEEecCCcc
Confidence 3455788999999999999999999997 888999999988 66889999999999999999999999999999
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 231 (621)
.+.+||..+... ..+.+.+|...|.+++|-|.|.++++++.|.+|+.|++.++.+++++.
T Consensus 173 ~~~LWd~~~~~~--------------------c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~ 232 (406)
T KOG0295|consen 173 SAKLWDFDTFFR--------------------CIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFP 232 (406)
T ss_pred chhheeHHHHHH--------------------HHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEecc
Confidence 999999887421 125667999999999999999999999999999999999999999999
Q ss_pred cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC
Q psy15549 232 EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 311 (621)
+|...|..+..+.||..+++++.|.+|++|-+.++++...+..+ ...|.+++|.|..
T Consensus 233 ~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~h-----------------------Eh~vEci~wap~~ 289 (406)
T KOG0295|consen 233 GHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREH-----------------------EHPVECIAWAPES 289 (406)
T ss_pred CchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhcc-----------------------ccceEEEEecccc
Confidence 99999999999999999999999999999999999777766544 3455889998876
Q ss_pred CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
.+=..... .+.. ..+.++.+++.|+
T Consensus 290 ~~~~i~~a-------------------------------------------------t~~~------~~~~~l~s~SrDk 314 (406)
T KOG0295|consen 290 SYPSISEA-------------------------------------------------TGST------NGGQVLGSGSRDK 314 (406)
T ss_pred cCcchhhc-------------------------------------------------cCCC------CCccEEEeecccc
Confidence 52211100 0000 0236788899999
Q ss_pred cEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCccc
Q psy15549 392 NILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRS 471 (621)
Q Consensus 392 ~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 471 (621)
+|++||+.++.++.++ .+|.+.|..++|+|-|+||+++.+|+++++||+.+++++..+.+|...++.+.|+.+-..+++
T Consensus 315 tIk~wdv~tg~cL~tL-~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvT 393 (406)
T KOG0295|consen 315 TIKIWDVSTGMCLFTL-VGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVT 393 (406)
T ss_pred eEEEEeccCCeEEEEE-ecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEe
Confidence 9999999999999999 579999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccHHHhc
Q psy15549 472 EDKPRSAEQAK 482 (621)
Q Consensus 472 ~~~~~~~~~w~ 482 (621)
++.|..+++|.
T Consensus 394 GsVdqt~KvwE 404 (406)
T KOG0295|consen 394 GSVDQTVKVWE 404 (406)
T ss_pred ccccceeeeee
Confidence 99999999885
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=265.21 Aligned_cols=290 Identities=18% Similarity=0.318 Sum_probs=241.0
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
+.+.||++.|+.+.|+|+|. +||+|+.|..|. +|++....... ..+++|+++|..
T Consensus 41 m~l~gh~geI~~~~F~P~gs-----~~aSgG~Dr~I~--------------LWnv~gdceN~------~~lkgHsgAVM~ 95 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHPDGS-----CFASGGSDRAIV--------------LWNVYGDCENF------WVLKGHSGAVME 95 (338)
T ss_pred hhcCCCcceEEEEEECCCCC-----eEeecCCcceEE--------------EEeccccccce------eeeccccceeEe
Confidence 45778999999999999998 999999999999 99876554432 357899999999
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCC-CEEEEEeCCCcEEEEEccCCCCC
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
+.|.+|+..|++++ |..++.||..++ +....+++|...|+.+.-+.-| .++.+++.|++++|||+++...+
T Consensus 96 l~~~~d~s~i~S~gtDk~v~~wD~~tG-------~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~ 168 (338)
T KOG0265|consen 96 LHGMRDGSHILSCGTDKTVRGWDAETG-------KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAI 168 (338)
T ss_pred eeeccCCCEEEEecCCceEEEEecccc-------eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchh
Confidence 99999999999988 889999999998 7788899999999999844444 36778899999999999998876
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcC
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp 244 (621)
+.+ ...-.++++.|..++..+.+|+-|+.|++||++.....+.+.+|...|+.+..+|
T Consensus 169 ~t~----------------------~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~ 226 (338)
T KOG0265|consen 169 KTF----------------------ENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSR 226 (338)
T ss_pred hcc----------------------ccceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEecc
Confidence 544 3456789999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCce----eeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 245 KNQYVATLSSDRSLRTYSIQSKK----VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 245 ~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
+|.++++-+.|.++++||++-.. ++..+..+... .......++|+|+++++.
T Consensus 227 ~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hn-------------------feknlL~cswsp~~~~i~----- 282 (338)
T KOG0265|consen 227 YGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHN-------------------FEKNLLKCSWSPNGTKIT----- 282 (338)
T ss_pred CCCccccccccceEEEEEecccCCCCceEEEeecchhh-------------------hhhhcceeeccCCCCccc-----
Confidence 99999999999999999997532 23333222111 111123455666555544
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
+++.|..+++||...
T Consensus 283 -----------------------------------------------------------------ags~dr~vyvwd~~~ 297 (338)
T KOG0265|consen 283 -----------------------------------------------------------------AGSADRFVYVWDTTS 297 (338)
T ss_pred -----------------------------------------------------------------cccccceEEEeeccc
Confidence 445788999999998
Q ss_pred CceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 401 ASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 401 ~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
...+..+ .||.+.|.+++|+|...+|.+++.|.+|++=.
T Consensus 298 r~~lykl-pGh~gsvn~~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 298 RRILYKL-PGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred ccEEEEc-CCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence 8888887 47999999999999999999999999998743
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=275.10 Aligned_cols=339 Identities=18% Similarity=0.282 Sum_probs=280.4
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
..+|..|++.|++++.+|+.+++++|+ |+.-.+|++.++ .....+.+|...|+++.|+.+|.+||+|+.+|.
T Consensus 57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~g-------e~~~eltgHKDSVt~~~FshdgtlLATGdmsG~ 129 (399)
T KOG0296|consen 57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTG-------EFAGELTGHKDSVTCCSFSHDGTLLATGDMSGK 129 (399)
T ss_pred eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCC-------cceeEecCCCCceEEEEEccCceEEEecCCCcc
Confidence 446899999999999999999999998 888899999988 567788999999999999999999999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 232 (621)
|+||+..++... ..+......+.-+.|+|.+..|+.|+.||.+.+|.+.++...+.+.+
T Consensus 130 v~v~~~stg~~~---------------------~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~G 188 (399)
T KOG0296|consen 130 VLVFKVSTGGEQ---------------------WKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSG 188 (399)
T ss_pred EEEEEcccCceE---------------------EEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecC
Confidence 999999998753 33345667789999999999999999999999999999888899999
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 312 (621)
|..++++-.|.|+|+.++++..||+|++|++.+++.+..+.... .....++.++..+.
T Consensus 189 h~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e----------------------~~~~~~~~~~~~~~ 246 (399)
T KOG0296|consen 189 HNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAE----------------------GLELPCISLNLAGS 246 (399)
T ss_pred CCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccc----------------------cCcCCccccccccc
Confidence 99999999999999999999999999999999998887765322 11235677777787
Q ss_pred eEEeccccccCCCCCCcceeeeeeeeecccC-CCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 313 LLIAPSGCLENSDSTRKPISVTHVFTRACLN-KPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 313 ~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
.++.++ .++.+.+.+........+.. ......+.+...+.++.+.|. +..-...++|+-||
T Consensus 247 ~~~~g~-----~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~-------------ss~lpL~A~G~vdG 308 (399)
T KOG0296|consen 247 TLTKGN-----SEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPS-------------SSKLPLAACGSVDG 308 (399)
T ss_pred eeEecc-----CCccEEEEccccceEEEecCCCCccccccchhhhhhhhhccc-------------ccccchhhcccccc
Confidence 777777 56666655544333333332 122233344445555555442 22335667777899
Q ss_pred cEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCccc
Q psy15549 392 NILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRS 471 (621)
Q Consensus 392 ~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 471 (621)
+|.|||+...++..... |...|+.+.|-+ ..+|++++.||.|+.||..+|.+...+.+|...+.....+++.+.+++
T Consensus 309 ~i~iyD~a~~~~R~~c~--he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT 385 (399)
T KOG0296|consen 309 TIAIYDLAASTLRHICE--HEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVT 385 (399)
T ss_pred eEEEEecccchhheecc--CCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEE
Confidence 99999999988777663 889999999998 679999999999999999999999999999999999999999999999
Q ss_pred CCCcccHHHhcc
Q psy15549 472 EDKPRSAEQAKG 483 (621)
Q Consensus 472 ~~~~~~~~~w~~ 483 (621)
.+.|+..+++..
T Consensus 386 ~s~D~~a~VF~v 397 (399)
T KOG0296|consen 386 VSDDNTALVFEV 397 (399)
T ss_pred ecCCCeEEEEec
Confidence 999988877654
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=276.55 Aligned_cols=278 Identities=22% Similarity=0.378 Sum_probs=248.1
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
..|++|+|+.+|. .||+|+.||.++ ||+..... +.++..|+++|.++.|+.+|
T Consensus 236 kdVT~L~Wn~~G~-----~LatG~~~G~~r--------------iw~~~G~l--------~~tl~~HkgPI~slKWnk~G 288 (524)
T KOG0273|consen 236 KDVTSLDWNNDGT-----LLATGSEDGEAR--------------IWNKDGNL--------ISTLGQHKGPIFSLKWNKKG 288 (524)
T ss_pred CCcceEEecCCCC-----eEEEeecCcEEE--------------EEecCchh--------hhhhhccCCceEEEEEcCCC
Confidence 4799999999998 999999999999 99876543 44689999999999999999
Q ss_pred CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 94 ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 94 ~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
+||++++ |+.+.+||...+ ...+.+..|..+-..+.|-.+ ..|++++.|+.|+|+.+....++
T Consensus 289 ~yilS~~vD~ttilwd~~~g-------~~~q~f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P~-------- 352 (524)
T KOG0273|consen 289 TYILSGGVDGTTILWDAHTG-------TVKQQFEFHSAPALDVDWQSN-DEFATSSTDGCIHVCKVGEDRPV-------- 352 (524)
T ss_pred CEEEeccCCccEEEEeccCc-------eEEEeeeeccCCccceEEecC-ceEeecCCCceEEEEEecCCCcc--------
Confidence 9999999 999999999887 667777888888788899754 46899999999999999988875
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCC------
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKN------ 246 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~------ 246 (621)
..+.+|.+.|.++.|+|.|.+|++++.|++++||+.........+.+|...|..+.|+|.|
T Consensus 353 -------------~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~ 419 (524)
T KOG0273|consen 353 -------------KTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNP 419 (524)
T ss_pred -------------eeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCC
Confidence 5667899999999999999999999999999999999999999999999999999999975
Q ss_pred ---CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccC
Q psy15549 247 ---QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLEN 323 (621)
Q Consensus 247 ---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~ 323 (621)
..+++++.|++|++||+..+.++..+..|.. +|.+++|+|+|+|+|+++
T Consensus 420 ~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~-----------------------pVysvafS~~g~ylAsGs----- 471 (524)
T KOG0273|consen 420 NMNLMLASASFDSTVKLWDVESGVPIHTLMKHQE-----------------------PVYSVAFSPNGRYLASGS----- 471 (524)
T ss_pred cCCceEEEeecCCeEEEEEccCCceeEeeccCCC-----------------------ceEEEEecCCCcEEEecC-----
Confidence 4689999999999999999999988865544 458999999999999877
Q ss_pred CCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCce
Q psy15549 324 SDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP 403 (621)
Q Consensus 324 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 403 (621)
.||.|.||++.+++.
T Consensus 472 -----------------------------------------------------------------~dg~V~iws~~~~~l 486 (524)
T KOG0273|consen 472 -----------------------------------------------------------------LDGCVHIWSTKTGKL 486 (524)
T ss_pred -----------------------------------------------------------------CCCeeEeccccchhe
Confidence 578899999999998
Q ss_pred eEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 404 FAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 404 ~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
++... ..+.|..++|+.+|.+|..+-.||.+++.|+.
T Consensus 487 ~~s~~--~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 487 VKSYQ--GTGGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred eEeec--CCCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 88874 45679999999999999999999999999874
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=308.68 Aligned_cols=366 Identities=30% Similarity=0.486 Sum_probs=288.8
Q ss_pred CccccceeeecCCCCeEEEeccccccCCcceEEEEec--CCceEEeeeccCccccccceeEEeccccccccceeeccccc
Q psy15549 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGG--ADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLS 78 (621)
Q Consensus 1 m~~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~--~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~ 78 (621)
|++..|.+..|+...|.+++.+||+. .+|||+ .||.++ ||+...--..
T Consensus 1 M~l~kp~wv~H~~~~IfSIdv~pdg~-----~~aTgGq~~d~~~~--------------iW~~~~vl~~----------- 50 (942)
T KOG0973|consen 1 MKLLKPTWVNHNEKSIFSIDVHPDGV-----KFATGGQVLDGGIV--------------IWSQDPVLDE----------- 50 (942)
T ss_pred CceecccccccCCeeEEEEEecCCce-----eEecCCccccccce--------------eeccccccch-----------
Confidence 88899999999999999999999998 999999 899998 8875421100
Q ss_pred cccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy15549 79 RHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~ 158 (621)
...++..-. ..+..+..|.+.|+|+.|+|||++||+|++|+.|.||..
T Consensus 51 -------------------------~~~~~~~l~-------k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~ 98 (942)
T KOG0973|consen 51 -------------------------KEEKNENLP-------KHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWER 98 (942)
T ss_pred -------------------------hhhhhcccc-------hhheeeccccCceeEEEECCCCCeEeeccCcceEEEeee
Confidence 001111111 445667789999999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceE
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ 238 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 238 (621)
.....-.. ........+.+.|.....+.+|.+.|..++|+|++.+|++++.|++|.|||..+.+.+..+++|.+.|.
T Consensus 99 ~~~~~~~~---fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VK 175 (942)
T KOG0973|consen 99 AEIGSGTV---FGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVK 175 (942)
T ss_pred cccCCccc---ccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeeccccccc
Confidence 75211111 111234556788999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
.+.|.|-|+|||+-+.|++|++|++.+....+.+..+- ........+..+.|||||.+|++..
T Consensus 176 Gvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf-----------------~~~~~~T~f~RlSWSPDG~~las~n 238 (942)
T KOG0973|consen 176 GVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPF-----------------EESPLTTFFLRLSWSPDGHHLASPN 238 (942)
T ss_pred ceEECCccCeeeeecCCceEEEEEcccceeeEeeccch-----------------hhCCCcceeeecccCCCcCeecchh
Confidence 99999999999999999999999988776766665332 2334456679999999999999887
Q ss_pred ccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCcc-CCCcEEEEEEcCCcEEEEe
Q psy15549 319 GCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFK-LPYRIVIAVATENNILLYD 397 (621)
Q Consensus 319 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd 397 (621)
+... ....+.+. .+ ..+.....+.+|...+.+++|+|.+|.-...+....-. ..+..+++|+.|++|.||.
T Consensus 239 A~n~-~~~~~~Ii------eR-~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~ 310 (942)
T KOG0973|consen 239 AVNG-GKSTIAII------ER-GTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWN 310 (942)
T ss_pred hccC-CcceeEEE------ec-CCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEe
Confidence 4211 12222222 22 23444567889999999999999998766552211111 1234677888899999999
Q ss_pred CCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCc
Q psy15549 398 TQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGE 456 (621)
Q Consensus 398 ~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~ 456 (621)
....+++..+.......|.+|+|+|||..|+.||.||+|.+++++..++...+......
T Consensus 311 T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~ElG~~ls~ee~~ 369 (942)
T KOG0973|consen 311 TALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKELGVALSEEEIS 369 (942)
T ss_pred cCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchHHhCcccChhhhc
Confidence 99999998887767789999999999999999999999999999999998888765443
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=299.02 Aligned_cols=256 Identities=25% Similarity=0.391 Sum_probs=222.3
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCcc--cc------cc---------ceeEEeccccccccceeecc
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPH--RL------KT---------GKIWYLTERESGIANVEFAS 75 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~--~~------~~---------~~iw~~~~~~~~~~~~~~~~ 75 (621)
...++|..|++|+. +||.|-.|..|++|-+.... .+ .. .++-|.... ....
T Consensus 378 ~~~v~ca~fSddss-----mlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~-------~~~~ 445 (707)
T KOG0263|consen 378 YQGVTCAEFSDDSS-----MLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSS-------GTSR 445 (707)
T ss_pred CCcceeEeecCCcc-----hhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCC-------ceeE
Confidence 34799999999998 99999999999966655311 00 00 111111111 1233
Q ss_pred ccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEE
Q psy15549 76 DLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154 (621)
Q Consensus 76 ~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~ 154 (621)
++.||.++|+.+.|+|+.++|++++ |..+++|.+.+. ..+..+.+|..+|+.+.|+|.|-||||++.|++.+
T Consensus 446 ~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~-------s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tAr 518 (707)
T KOG0263|consen 446 TLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTW-------SCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTAR 518 (707)
T ss_pred EeecCCCceeeeeecccccceeeccCCcceeeeecccc-------eeEEEecCCCcceeeEEecCCceEEEecCCCceee
Confidence 5889999999999999999999999 899999999987 67778899999999999999999999999999999
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCC
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHK 234 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 234 (621)
+|..+...+. +.+.+|-+.|.|+.|+|+..++++||.|.+|++||+.+|..++.|.+|.
T Consensus 519 LWs~d~~~Pl---------------------RifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~ 577 (707)
T KOG0263|consen 519 LWSTDHNKPL---------------------RIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHK 577 (707)
T ss_pred eeecccCCch---------------------hhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCC
Confidence 9999887765 6678999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeE
Q psy15549 235 KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL 314 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l 314 (621)
++|.+++|||+|++|++|+.||.|.+||+.++..+..+.+| .+.|.++.||.||..|
T Consensus 578 ~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~H-----------------------t~ti~SlsFS~dg~vL 634 (707)
T KOG0263|consen 578 GPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGH-----------------------TGTIYSLSFSRDGNVL 634 (707)
T ss_pred CceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcc-----------------------cCceeEEEEecCCCEE
Confidence 99999999999999999999999999999999988887644 4567999999999999
Q ss_pred EeccccccCCCCCCcceeeeee
Q psy15549 315 IAPSGCLENSDSTRKPISVTHV 336 (621)
Q Consensus 315 ~~~s~~~~~~d~~i~~~~~~~~ 336 (621)
|+++ .|.++++||+...
T Consensus 635 asgg-----~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 635 ASGG-----ADNSVRLWDLTKV 651 (707)
T ss_pred EecC-----CCCeEEEEEchhh
Confidence 9999 8999999987643
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=268.27 Aligned_cols=290 Identities=22% Similarity=0.366 Sum_probs=249.7
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
.-+++.+|-++|.|+++.|..+ ++++|+.|++|. |||+.+++... ++.||-..|
T Consensus 143 l~rVi~gHlgWVr~vavdP~n~-----wf~tgs~Drtik--------------IwDlatg~Lkl-------tltGhi~~v 196 (460)
T KOG0285|consen 143 LYRVISGHLGWVRSVAVDPGNE-----WFATGSADRTIK--------------IWDLATGQLKL-------TLTGHIETV 196 (460)
T ss_pred ehhhhhhccceEEEEeeCCCce-----eEEecCCCceeE--------------EEEcccCeEEE-------eecchhhee
Confidence 3457788999999999999998 999999999999 99999887644 489999999
Q ss_pred EEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 85 NVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 85 ~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
..+++|+...||.+++ |+.|+.||+... +.++.+.+|-..|.|++.+|.-+.|++|+.|.+++|||+++...
T Consensus 197 r~vavS~rHpYlFs~gedk~VKCwDLe~n-------kvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~ 269 (460)
T KOG0285|consen 197 RGVAVSKRHPYLFSAGEDKQVKCWDLEYN-------KVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRAS 269 (460)
T ss_pred eeeeecccCceEEEecCCCeeEEEechhh-------hhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccce
Confidence 9999999999999998 888999999988 78999999999999999999999999999999999999999986
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEc
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD 243 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~s 243 (621)
+ ..+.+|...|..+.+.|-...+++|+.|++|++||+..|+...++..|...|++++.+
T Consensus 270 V---------------------~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lh 328 (460)
T KOG0285|consen 270 V---------------------HVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLH 328 (460)
T ss_pred E---------------------EEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecC
Confidence 5 7789999999999999988899999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccC
Q psy15549 244 PKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLEN 323 (621)
Q Consensus 244 p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~ 323 (621)
|....||+++.|. |+-|++..+..+..+..+. .-|.+++...
T Consensus 329 P~e~~fASas~dn-ik~w~~p~g~f~~nlsgh~-----------------------~iintl~~ns-------------- 370 (460)
T KOG0285|consen 329 PKENLFASASPDN-IKQWKLPEGEFLQNLSGHN-----------------------AIINTLSVNS-------------- 370 (460)
T ss_pred CchhhhhccCCcc-ceeccCCccchhhcccccc-----------------------ceeeeeeecc--------------
Confidence 9999999998875 8999998887665543222 2223333322
Q ss_pred CCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCce
Q psy15549 324 SDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP 403 (621)
Q Consensus 324 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 403 (621)
++.+++|+++|.|.+||.+++-.
T Consensus 371 ---------------------------------------------------------D~v~~~G~dng~~~fwdwksg~n 393 (460)
T KOG0285|consen 371 ---------------------------------------------------------DGVLVSGGDNGSIMFWDWKSGHN 393 (460)
T ss_pred ---------------------------------------------------------CceEEEcCCceEEEEEecCcCcc
Confidence 35567777889999999998865
Q ss_pred eEEEec-------ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 404 FAFIAN-------IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 404 ~~~~~~-------~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
.+.... .....|++.+|...|..|+||..|.+|++|.-+.
T Consensus 394 yQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe 440 (460)
T KOG0285|consen 394 YQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDE 440 (460)
T ss_pred cccccccccCCccccccceeEEeecccCceEEeccCCcceEEEeccc
Confidence 544321 1235689999999999999999999999998653
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=301.32 Aligned_cols=249 Identities=27% Similarity=0.432 Sum_probs=221.9
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCc-------c-----------------ccccceecccccccCCCeEEE
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERE-------S-----------------GIANVEFASDLSRHQKAVNVV 135 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~-------~-----------------~~~~~~~~~~~~~h~~~V~~i 135 (621)
...++|..|++|+.+||.|- |..|++|.+.... . ..........+.+|.++|..+
T Consensus 378 ~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~ 457 (707)
T KOG0263|consen 378 YQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGC 457 (707)
T ss_pred CCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeee
Confidence 35799999999999999887 8889999998421 0 000112334578999999999
Q ss_pred EECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCe
Q psy15549 136 RFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNT 215 (621)
Q Consensus 136 ~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~ 215 (621)
.|+|+.++|++|++|++||+|.+.+..++ ..+.+|..+|+++.|+|-|-++|+++.|++
T Consensus 458 sFsPd~rfLlScSED~svRLWsl~t~s~~---------------------V~y~GH~~PVwdV~F~P~GyYFatas~D~t 516 (707)
T KOG0263|consen 458 SFSPDRRFLLSCSEDSSVRLWSLDTWSCL---------------------VIYKGHLAPVWDVQFAPRGYYFATASHDQT 516 (707)
T ss_pred eecccccceeeccCCcceeeeecccceeE---------------------EEecCCCcceeeEEecCCceEEEecCCCce
Confidence 99999999999999999999999998864 667899999999999999999999999999
Q ss_pred EEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccccccccc
Q psy15549 216 AIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHD 295 (621)
Q Consensus 216 i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (621)
.++|......+++.+.+|.+.|.|+.|+|+..|+++||.|.+||+||+.+|..++.+.+
T Consensus 517 ArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~G--------------------- 575 (707)
T KOG0263|consen 517 ARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTG--------------------- 575 (707)
T ss_pred eeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecC---------------------
Confidence 99999999999999999999999999999999999999999999999999999888864
Q ss_pred CCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCC
Q psy15549 296 DTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKP 375 (621)
Q Consensus 296 ~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (621)
|++.|.+++|||+|++|++++
T Consensus 576 --H~~~V~al~~Sp~Gr~LaSg~--------------------------------------------------------- 596 (707)
T KOG0263|consen 576 --HKGPVTALAFSPCGRYLASGD--------------------------------------------------------- 596 (707)
T ss_pred --CCCceEEEEEcCCCceEeecc---------------------------------------------------------
Confidence 455679999999999998866
Q ss_pred CccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 376 LFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 376 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
.||.|.+||+.+++++..+. +|.+.|.++.||.||..||+|+.|.+|++||+..-
T Consensus 597 -------------ed~~I~iWDl~~~~~v~~l~-~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 597 -------------EDGLIKIWDLANGSLVKQLK-GHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred -------------cCCcEEEEEcCCCcchhhhh-cccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 78999999999999999884 69999999999999999999999999999998754
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=269.31 Aligned_cols=296 Identities=15% Similarity=0.281 Sum_probs=242.8
Q ss_pred ccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCc
Q psy15549 4 TIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA 83 (621)
Q Consensus 4 ~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~ 83 (621)
++-+++..|.+.|+-+.||++|+ +||+++.|.+.. ||.+..... +++..++.+|..+
T Consensus 215 qt~qil~~htdEVWfl~FS~nGk-----yLAsaSkD~Tai--------------iw~v~~d~~----~kl~~tlvgh~~~ 271 (519)
T KOG0293|consen 215 QTWQILQDHTDEVWFLQFSHNGK-----YLASASKDSTAI--------------IWIVVYDVH----FKLKKTLVGHSQP 271 (519)
T ss_pred hhhhhHhhCCCcEEEEEEcCCCe-----eEeeccCCceEE--------------EEEEecCcc----eeeeeeeecccCc
Confidence 45567888999999999999999 999999999999 888765543 5567789999999
Q ss_pred EEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccc-cccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 84 VNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDL-SRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 84 V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
|..+.||||.++|++|+ +..+.+||+.++. ..+.+ .+|...+.+++|.|||..+++|+.|+++..||++..
T Consensus 272 V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd-------~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn 344 (519)
T KOG0293|consen 272 VSYIMWSPDDRYLLACGFDEVLSLWDVDTGD-------LRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGN 344 (519)
T ss_pred eEEEEECCCCCeEEecCchHheeeccCCcch-------hhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcc
Confidence 99999999999999988 7789999999883 33332 235678999999999999999999999999998876
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecC-CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRG-HLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 240 (621)
.. ....+ ....|.+++.++||+++++.+.|..|++|+.++......+. ...+|+++
T Consensus 345 ~~----------------------~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis-e~~~its~ 401 (519)
T KOG0293|consen 345 IL----------------------GNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS-EEQPITSF 401 (519)
T ss_pred hh----------------------hcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc-ccCceeEE
Confidence 42 11122 22569999999999999999999999999998776665443 45679999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 241 AWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 241 ~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
+.|.+++++++--.+..+++||+.....+..+.++. .|.+++-.+
T Consensus 402 ~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghk---------------------------------q~~fiIrSC-- 446 (519)
T KOG0293|consen 402 SISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHK---------------------------------QGHFIIRSC-- 446 (519)
T ss_pred EEcCCCcEEEEEcccCeeEEeecchhhHHHHhhccc---------------------------------ccceEEEec--
Confidence 999999999999999999999999777776665433 233443222
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
.. + .++.++++|++|+.|+||+..+
T Consensus 447 ---Fg-------------------------g---------------------------~~~~fiaSGSED~kvyIWhr~s 471 (519)
T KOG0293|consen 447 ---FG-------------------------G---------------------------GNDKFIASGSEDSKVYIWHRIS 471 (519)
T ss_pred ---cC-------------------------C---------------------------CCcceEEecCCCceEEEEEccC
Confidence 00 0 1346788999999999999999
Q ss_pred CceeEEEecccccceEEEEEcCCC-CeEEEEeCCCcEEEEEecC
Q psy15549 401 ASPFAFIANIHYTKLTDITWSSDG-KVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 401 ~~~~~~~~~~h~~~v~~~~~spdg-~~l~s~s~dg~i~iw~~~~ 443 (621)
++++..+ .||...|++++|+|.. ..||++|+||+||||....
T Consensus 472 gkll~~L-sGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 472 GKLLAVL-SGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred CceeEee-cCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 9999999 5799999999999965 5799999999999998764
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=297.45 Aligned_cols=293 Identities=26% Similarity=0.467 Sum_probs=246.7
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
+..+|...|.|+.|+++|+ +|++++.++.++ +|++..... .+...+.+|...|+++
T Consensus 154 ~~~~~~~sv~~~~fs~~g~-----~l~~~~~~~~i~--------------~~~~~~~~~-----~~~~~l~~h~~~v~~~ 209 (456)
T KOG0266|consen 154 LAGHECPSVTCVDFSPDGR-----ALAAASSDGLIR--------------IWKLEGIKS-----NLLRELSGHTRGVSDV 209 (456)
T ss_pred ecccccCceEEEEEcCCCC-----eEEEccCCCcEE--------------Eeecccccc-----hhhccccccccceeee
Confidence 3455678999999999999 899999999999 888855542 1234568999999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
+|+|+++++++++ |..++||++.... ..++.+.+|...|++++|+|+|+++++|+.|++|+|||+.++++.
T Consensus 210 ~fs~d~~~l~s~s~D~tiriwd~~~~~------~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~-- 281 (456)
T KOG0266|consen 210 AFSPDGSYLLSGSDDKTLRIWDLKDDG------RNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECV-- 281 (456)
T ss_pred EECCCCcEEEEecCCceEEEeeccCCC------eEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEE--
Confidence 9999999999998 8889999994432 678889999999999999999999999999999999999998754
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEeccCCcc--eEEEEE
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK--NLGILTEHKKF--VQGVAW 242 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~--v~~l~~ 242 (621)
..+.+|...|++++|++++++|++++.|+.|++||+.++. +...+..+... ++++.|
T Consensus 282 -------------------~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~f 342 (456)
T KOG0266|consen 282 -------------------RKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQF 342 (456)
T ss_pred -------------------EeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEE
Confidence 7789999999999999999999999999999999999999 56777666555 999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
+|++.+|++++.|+.+++||+..+..+..+..+.... ..+.+..++
T Consensus 343 sp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~--------------------~~~~~~~~~-------------- 388 (456)
T KOG0266|consen 343 SPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLV--------------------RCIFSPTLS-------------- 388 (456)
T ss_pred CCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcc--------------------eeEeccccc--------------
Confidence 9999999999999999999999988776664332110 000111111
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
..+.++++++.|+.|++||+.++.
T Consensus 389 --------------------------------------------------------~~~~~i~sg~~d~~v~~~~~~s~~ 412 (456)
T KOG0266|consen 389 --------------------------------------------------------TGGKLIYSGSEDGSVYVWDSSSGG 412 (456)
T ss_pred --------------------------------------------------------CCCCeEEEEeCCceEEEEeCCccc
Confidence 134677788899999999999988
Q ss_pred eeEEEeccc-ccceEEEEEcCCCCeEEEEe--CCCcEEEEEec
Q psy15549 403 PFAFIANIH-YTKLTDITWSSDGKVLIASS--TDGYCSIISFG 442 (621)
Q Consensus 403 ~~~~~~~~h-~~~v~~~~~spdg~~l~s~s--~dg~i~iw~~~ 442 (621)
.+..+ .+| ...+..+.|+|...++++++ .|+.+++|..+
T Consensus 413 ~~~~l-~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 413 ILQRL-EGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred hhhhh-cCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 88877 468 88999999999999999998 78999999864
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=270.98 Aligned_cols=279 Identities=23% Similarity=0.392 Sum_probs=244.5
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEcc
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
...|..|.|.|+|+.|++|+ .|.+.+|+...- .....++.|..+|.++.|+++|.++++|+.+|.|++|+..
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~f-------nFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpn 168 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSF-------NFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPN 168 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCcee-------eHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccc
Confidence 45799999999999999998 778999998543 5566678999999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeec-CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceE
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILR-GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ 238 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 238 (621)
-... +... .|...|++++|+|+...|++++.||+|+|||....+....+.+|.-.|.
T Consensus 169 mnnV----------------------k~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVk 226 (464)
T KOG0284|consen 169 MNNV----------------------KIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVK 226 (464)
T ss_pred hhhh----------------------HHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcc
Confidence 5542 2333 4559999999999989999999999999999999888888999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
++.|+|.-..|++++.|..|++||.+++.++.++.. |+..|..+.|+|++++|++++
T Consensus 227 svdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~-----------------------HKntVl~~~f~~n~N~Llt~s 283 (464)
T KOG0284|consen 227 SVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHG-----------------------HKNTVLAVKFNPNGNWLLTGS 283 (464)
T ss_pred eeccCCccceeEEccCCceeEeecCCCcchhhhhhh-----------------------ccceEEEEEEcCCCCeeEEcc
Confidence 999999999999999999999999999999887754 455668899999998888776
Q ss_pred ccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeC
Q psy15549 319 GCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDT 398 (621)
Q Consensus 319 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 398 (621)
.|..+++||+
T Consensus 284 ----------------------------------------------------------------------kD~~~kv~Di 293 (464)
T KOG0284|consen 284 ----------------------------------------------------------------------KDQSCKVFDI 293 (464)
T ss_pred ----------------------------------------------------------------------CCceEEEEeh
Confidence 5678889999
Q ss_pred CCCceeEEEecccccceEEEEEcCCC-CeEEEEeCCCcEEEEEec-CCcCCcccCCCCCcccccCCCCCCCCcccCCCcc
Q psy15549 399 QHASPFAFIANIHYTKLTDITWSSDG-KVLIASSTDGYCSIISFG-DNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPR 476 (621)
Q Consensus 399 ~~~~~~~~~~~~h~~~v~~~~~spdg-~~l~s~s~dg~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 476 (621)
++.+.+..+ .+|...|++++|+|-. .+|.+|+.||.|..|.+. ...+...-.+|...+..+.++|-|..+++++.|.
T Consensus 294 R~mkEl~~~-r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~ 372 (464)
T KOG0284|consen 294 RTMKELFTY-RGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDR 372 (464)
T ss_pred hHhHHHHHh-hcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCc
Confidence 888777777 5799999999999964 578889999999999999 4455566667999999999999999999999999
Q ss_pred cHHHhc
Q psy15549 477 SAEQAK 482 (621)
Q Consensus 477 ~~~~w~ 482 (621)
+++.|.
T Consensus 373 t~rfw~ 378 (464)
T KOG0284|consen 373 TVRFWT 378 (464)
T ss_pred ceeeec
Confidence 999996
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=263.95 Aligned_cols=295 Identities=21% Similarity=0.324 Sum_probs=256.9
Q ss_pred cceeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEE
Q psy15549 69 ANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG 147 (621)
Q Consensus 69 ~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~ 147 (621)
..+++.+.+.+|.+.|.|+++.|...++++|+ |+.+.|||+.++ .+..++.+|-..|..+++|+-..||+++
T Consensus 139 apwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg-------~LkltltGhi~~vr~vavS~rHpYlFs~ 211 (460)
T KOG0285|consen 139 APWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATG-------QLKLTLTGHIETVRGVAVSKRHPYLFSA 211 (460)
T ss_pred CcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccC-------eEEEeecchhheeeeeeecccCceEEEe
Confidence 35667788999999999999999999999999 999999999998 7788899999999999999999999999
Q ss_pred eCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Q psy15549 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL 227 (621)
Q Consensus 148 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~ 227 (621)
+.|+.|+.||+...+.+ +.+.+|-+.|+|++.+|.-..|++|+.|.+++|||+++...+
T Consensus 212 gedk~VKCwDLe~nkvI---------------------R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V 270 (460)
T KOG0285|consen 212 GEDKQVKCWDLEYNKVI---------------------RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASV 270 (460)
T ss_pred cCCCeeEEEechhhhhH---------------------HHhccccceeEEEeccccceeEEecCCcceEEEeeecccceE
Confidence 99999999999999865 566899999999999999999999999999999999999999
Q ss_pred EEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 228 GILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
..+.+|..+|.++.+.|-...+++|+.|++|++||++.++....+. .++..+++++.
T Consensus 271 ~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt-----------------------~hkksvral~l 327 (460)
T KOG0285|consen 271 HVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLT-----------------------HHKKSVRALCL 327 (460)
T ss_pred EEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeee-----------------------cccceeeEEec
Confidence 9999999999999999988899999999999999999998877664 34455688889
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
+|....+|+++
T Consensus 328 hP~e~~fASas--------------------------------------------------------------------- 338 (460)
T KOG0285|consen 328 HPKENLFASAS--------------------------------------------------------------------- 338 (460)
T ss_pred CCchhhhhccC---------------------------------------------------------------------
Confidence 88887777665
Q ss_pred EcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCC---C-----CCcccc
Q psy15549 388 ATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP---P-----SGEESK 459 (621)
Q Consensus 388 ~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~---~-----~~~~~~ 459 (621)
-..|+-|++..+..+..+ .+|...|.+++...|| ++++|++.|.+.+||..+|-..+.+.. + ...+..
T Consensus 339 --~dnik~w~~p~g~f~~nl-sgh~~iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~a 414 (460)
T KOG0285|consen 339 --PDNIKQWKLPEGEFLQNL-SGHNAIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFA 414 (460)
T ss_pred --CccceeccCCccchhhcc-ccccceeeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeE
Confidence 245777888888877775 5799999999999887 789999999999999999865555422 2 122445
Q ss_pred cCCCCCCCCcccCCCcccHHHhcccCcc
Q psy15549 460 ENDPTKGEPVRSEDKPRSAEQAKGEGKV 487 (621)
Q Consensus 460 ~~~~~~~~~~~s~~~~~~~~~w~~~~~~ 487 (621)
..|...|..++++..|.+|++|+-.+..
T Consensus 415 s~fDktg~rlit~eadKtIk~~keDe~a 442 (460)
T KOG0285|consen 415 SCFDKTGSRLITGEADKTIKMYKEDEHA 442 (460)
T ss_pred EeecccCceEEeccCCcceEEEeccccc
Confidence 5677889999999999999999865553
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=248.71 Aligned_cols=272 Identities=16% Similarity=0.224 Sum_probs=229.4
Q ss_pred CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 94 ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 94 ~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
-+|++++ |.+|++|...++ .+..++......|+.+...|++++||+++. ..||+||+.++...
T Consensus 11 viLvsA~YDhTIRfWqa~tG-------~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~-------- 74 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTG-------ICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPN-------- 74 (311)
T ss_pred eEEEeccCcceeeeeehhcC-------eEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCC--------
Confidence 4778888 999999999998 788888888889999999999999999885 47999999998864
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEE
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATL 252 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~ 252 (621)
+...+.+|...|+++.|..+|+++++|++||+++|||++...+.+.+ .|..+|.++..+|+...|++|
T Consensus 75 -----------Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~-~~~spVn~vvlhpnQteLis~ 142 (311)
T KOG0315|consen 75 -----------PVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNY-QHNSPVNTVVLHPNQTELISG 142 (311)
T ss_pred -----------ceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhc-cCCCCcceEEecCCcceEEee
Confidence 24678899999999999999999999999999999999997666655 477999999999999999999
Q ss_pred eCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCccee
Q psy15549 253 SSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPIS 332 (621)
Q Consensus 253 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~ 332 (621)
..+|.|++||+....+...+.. .....|++++..|||.+++++.
T Consensus 143 dqsg~irvWDl~~~~c~~~liP----------------------e~~~~i~sl~v~~dgsml~a~n-------------- 186 (311)
T KOG0315|consen 143 DQSGNIRVWDLGENSCTHELIP----------------------EDDTSIQSLTVMPDGSMLAAAN-------------- 186 (311)
T ss_pred cCCCcEEEEEccCCccccccCC----------------------CCCcceeeEEEcCCCcEEEEec--------------
Confidence 9999999999988765554421 1234678999999999888776
Q ss_pred eeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC------ceeEE
Q psy15549 333 VTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA------SPFAF 406 (621)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~------~~~~~ 406 (621)
+.|+.++|++-.. +++..
T Consensus 187 --------------------------------------------------------nkG~cyvW~l~~~~~~s~l~P~~k 210 (311)
T KOG0315|consen 187 --------------------------------------------------------NKGNCYVWRLLNHQTASELEPVHK 210 (311)
T ss_pred --------------------------------------------------------CCccEEEEEccCCCccccceEhhh
Confidence 3455566665443 23444
Q ss_pred EecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC-cCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 407 IANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN-EIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 407 ~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
+ ..|.+.+..+.+|||+++||++|.|.+++||+.++- .+...+.++..-+....|+.||+.+++++.|..+++|+++.
T Consensus 211 ~-~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~ 289 (311)
T KOG0315|consen 211 F-QAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSA 289 (311)
T ss_pred e-ecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeeccccc
Confidence 4 469999999999999999999999999999999987 55556677777888999999999999999999999999664
Q ss_pred c
Q psy15549 486 K 486 (621)
Q Consensus 486 ~ 486 (621)
.
T Consensus 290 ~ 290 (311)
T KOG0315|consen 290 G 290 (311)
T ss_pred C
Confidence 3
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=279.79 Aligned_cols=323 Identities=15% Similarity=0.132 Sum_probs=232.8
Q ss_pred cccCCCeEEEEECCC-----------CCEEEEEeCCCcEEEEEccCCCCCCCCCC----CCcc---ccccccc-------
Q psy15549 126 SRHQKAVNVVRFSPN-----------GELLASGDDESTIIVWKQKTDQDLPEFPS----SNLD---EENVNKE------- 180 (621)
Q Consensus 126 ~~h~~~V~~i~~sp~-----------g~~l~s~s~dg~i~vwd~~~~~~~~~~~~----~~~~---~~~~~~~------- 180 (621)
..|...|+.+.--|. ...|++|+.|++||+|++........+.. .++. ....+..
T Consensus 366 lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~ 445 (1080)
T KOG1408|consen 366 LYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASA 445 (1080)
T ss_pred eeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccC
Confidence 356777777765551 12688999999999999987443222111 0000 0000000
Q ss_pred --ceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcC---CCCEEEEEeCC
Q psy15549 181 --HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP---KNQYVATLSSD 255 (621)
Q Consensus 181 --~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp---~~~~l~s~~~d 255 (621)
.-.......+....+++++.+|+|++||+|..-|+++||++...+....+.+|...|.|+.|+- ..++||+++.|
T Consensus 446 ~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrd 525 (1080)
T KOG1408|consen 446 GIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRD 525 (1080)
T ss_pred CcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCC
Confidence 0001122234456799999999999999999999999999999888888999999999999985 24779999999
Q ss_pred CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC--CeEEeccccccCCCCCCcceee
Q psy15549 256 RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG--QLLIAPSGCLENSDSTRKPISV 333 (621)
Q Consensus 256 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg--~~l~~~s~~~~~~d~~i~~~~~ 333 (621)
..|.+||+...-.+ +...+.|.+.|+++.|.-.| ..+++++ .|..+..-..
T Consensus 526 RlIHV~Dv~rny~l----------------------~qtld~HSssITsvKFa~~gln~~MiscG-----ADksimFr~~ 578 (1080)
T KOG1408|consen 526 RLIHVYDVKRNYDL----------------------VQTLDGHSSSITSVKFACNGLNRKMISCG-----ADKSIMFRVN 578 (1080)
T ss_pred ceEEEEecccccch----------------------hhhhcccccceeEEEEeecCCceEEEecc-----Cchhhheehh
Confidence 99999998654322 12345667788999998887 4555555 4554433222
Q ss_pred eeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEec--cc
Q psy15549 334 THVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIAN--IH 411 (621)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~h 411 (621)
........+......+ .......+...| .-+++++++.|..|+|||+..+++.+.+.. +|
T Consensus 579 qk~~~g~~f~r~t~t~--~ktTlYDm~Vdp----------------~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~ 640 (1080)
T KOG1408|consen 579 QKASSGRLFPRHTQTL--SKTTLYDMAVDP----------------TSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDH 640 (1080)
T ss_pred ccccCceecccccccc--ccceEEEeeeCC----------------CcceEEEEecccceEEEeccccceeeeecccccC
Confidence 2111111111111111 112222333222 458899999999999999999999998865 56
Q ss_pred ccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhcccCcccccc
Q psy15549 412 YTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGKVLGEK 491 (621)
Q Consensus 412 ~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~~~~~~~ 491 (621)
.+....+...|.|-|||+.+.|.++.++|+.+|+++..+.+|+..++.+.|.+|.+.+++.+.||.|++|++....+.++
T Consensus 641 eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~~mii~m 720 (1080)
T KOG1408|consen 641 EGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPLTMIIRM 720 (1080)
T ss_pred CCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEECchhHhHHH
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999887666555
Q ss_pred cc
Q psy15549 492 QT 493 (621)
Q Consensus 492 ~~ 493 (621)
..
T Consensus 721 ~~ 722 (1080)
T KOG1408|consen 721 VN 722 (1080)
T ss_pred HH
Confidence 43
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=274.14 Aligned_cols=284 Identities=31% Similarity=0.476 Sum_probs=242.3
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
...|.++|++++|+|+++ +|++++.||.|. +|++..+... ..+..|...+..+.
T Consensus 5 ~~~h~~~i~~~~~~~~~~-----~l~~~~~~g~i~--------------i~~~~~~~~~-------~~~~~~~~~i~~~~ 58 (289)
T cd00200 5 LKGHTGGVTCVAFSPDGK-----LLATGSGDGTIK--------------VWDLETGELL-------RTLKGHTGPVRDVA 58 (289)
T ss_pred hcccCCCEEEEEEcCCCC-----EEEEeecCcEEE--------------EEEeeCCCcE-------EEEecCCcceeEEE
Confidence 346889999999999998 999999999999 8988866532 23678889999999
Q ss_pred EccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 89 FSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 89 ~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
|+|++++|++++ ++.+.+|++... .....+..|...|.++.|+++++++++++.++.|++||+.+.+..
T Consensus 59 ~~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--- 128 (289)
T cd00200 59 ASADGTYLASGSSDKTIRLWDLETG-------ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCL--- 128 (289)
T ss_pred ECCCCCEEEEEcCCCeEEEEEcCcc-------cceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEE---
Confidence 999999998888 889999999875 445566788889999999999889999888999999999866543
Q ss_pred CCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC
Q psy15549 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247 (621)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~ 247 (621)
..+..|...+.+++|+|++.++++++.++.|++||+++++.+..+..|...+.++.|+|+++
T Consensus 129 ------------------~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 190 (289)
T cd00200 129 ------------------TTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGE 190 (289)
T ss_pred ------------------EEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcC
Confidence 44557888999999999999999888899999999999998888888988999999999999
Q ss_pred EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCC
Q psy15549 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDST 327 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~ 327 (621)
.+++++.++.|++||++.++.+..+. .+...+.++.|+|++.++++++
T Consensus 191 ~l~~~~~~~~i~i~d~~~~~~~~~~~-----------------------~~~~~i~~~~~~~~~~~~~~~~--------- 238 (289)
T cd00200 191 KLLSSSSDGTIKLWDLSTGKCLGTLR-----------------------GHENGVNSVAFSPDGYLLASGS--------- 238 (289)
T ss_pred EEEEecCCCcEEEEECCCCceecchh-----------------------hcCCceEEEEEcCCCcEEEEEc---------
Confidence 99999999999999998877665542 1233567788888765555432
Q ss_pred CcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEE
Q psy15549 328 RKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFI 407 (621)
Q Consensus 328 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 407 (621)
.++.|++||+.+++....+
T Consensus 239 -------------------------------------------------------------~~~~i~i~~~~~~~~~~~~ 257 (289)
T cd00200 239 -------------------------------------------------------------EDGTIRVWDLRTGECVQTL 257 (289)
T ss_pred -------------------------------------------------------------CCCcEEEEEcCCceeEEEc
Confidence 5789999999988888777
Q ss_pred ecccccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 408 ANIHYTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 408 ~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
. .|...|.+++|+|++++|++++.||.|++|+
T Consensus 258 ~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 258 S-GHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred c-ccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 5 6888999999999999999999999999996
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=290.55 Aligned_cols=291 Identities=26% Similarity=0.419 Sum_probs=247.9
Q ss_pred ccccc-cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcE
Q psy15549 76 DLSRH-QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTI 153 (621)
Q Consensus 76 ~~~~h-~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i 153 (621)
.+..| ...|.++.|+++|++|++++ ++.+++|....... .....+.+|...|..++|+|+++++++++.|++|
T Consensus 153 ~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~-----~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~ti 227 (456)
T KOG0266|consen 153 TLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS-----NLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTL 227 (456)
T ss_pred eecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc-----hhhccccccccceeeeEECCCCcEEEEecCCceE
Confidence 34444 78999999999999999987 88999999955421 2566668999999999999999999999999999
Q ss_pred EEEEccCC-CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc
Q psy15549 154 IVWKQKTD-QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 154 ~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 232 (621)
+|||+... .. .+.+.+|...|++++|+|+++++++|+.|++|+|||+++++++..+.+
T Consensus 228 riwd~~~~~~~---------------------~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~ 286 (456)
T KOG0266|consen 228 RIWDLKDDGRN---------------------LKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKG 286 (456)
T ss_pred EEeeccCCCeE---------------------EEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeec
Confidence 99999443 43 477889999999999999999999999999999999999999999999
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCcee--eeecccCCCCCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV--ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
|...|++++|++++++|++++.|+.|++||+.++.. +..+.... ... .++++.|+|+
T Consensus 287 hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~--------------------~~~-~~~~~~fsp~ 345 (456)
T KOG0266|consen 287 HSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAE--------------------NSA-PVTSVQFSPN 345 (456)
T ss_pred cCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCC--------------------CCC-ceeEEEECCC
Confidence 999999999999999999999999999999999883 34443221 112 5688999999
Q ss_pred CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 311 g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
+.++++++ .|
T Consensus 346 ~~~ll~~~----------------------------------------------------------------------~d 355 (456)
T KOG0266|consen 346 GKYLLSAS----------------------------------------------------------------------LD 355 (456)
T ss_pred CcEEEEec----------------------------------------------------------------------CC
Confidence 98888766 56
Q ss_pred CcEEEEeCCCCceeEEEeccccc---ceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCC-CCcccccCCCCCC
Q psy15549 391 NNILLYDTQHASPFAFIANIHYT---KLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPP-SGEESKENDPTKG 466 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~---~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 466 (621)
+.+++||+..+....... +|.. .+.+...++.|+++++|+.|+.|++|++.++.....+.+| ...+....+++..
T Consensus 356 ~~~~~w~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~ 434 (456)
T KOG0266|consen 356 RTLKLWDLRSGKSVGTYT-GHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTE 434 (456)
T ss_pred CeEEEEEccCCcceeeec-ccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCc
Confidence 788888888888777774 4555 4455566889999999999999999999999999999999 7888888999999
Q ss_pred CCcccCC--CcccHHHhccc
Q psy15549 467 EPVRSED--KPRSAEQAKGE 484 (621)
Q Consensus 467 ~~~~s~~--~~~~~~~w~~~ 484 (621)
..+++.+ .|+.+++|..+
T Consensus 435 ~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 435 NLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred CeeeecCcCCCceEEEecCC
Confidence 9888887 68888888754
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=277.72 Aligned_cols=292 Identities=20% Similarity=0.298 Sum_probs=247.0
Q ss_pred eccccccccCcEEEEEEcc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC
Q psy15549 73 FASDLSRHQKAVNVVRFSP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE 150 (621)
Q Consensus 73 ~~~~~~~h~~~V~~l~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d 150 (621)
....+.+|+..|+++.|.| .+.+|++++ |+.|+||++.... .+++++.+|..+|..++|+++|..|++++.|
T Consensus 206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~------~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD 279 (503)
T KOG0282|consen 206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDR------RCLRTFKGHRKPVRDASFNNCGTSFLSASFD 279 (503)
T ss_pred heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCc------ceehhhhcchhhhhhhhccccCCeeeeeecc
Confidence 3456899999999999999 899999988 9999999998843 8899999999999999999999999999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEE
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKGKNLGI 229 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~~~~~~ 229 (621)
+.|++||+++++++..+ .....++|+.|+||+ +.+++|+.|+.|+.||+++++.++.
T Consensus 280 ~~lKlwDtETG~~~~~f----------------------~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqe 337 (503)
T KOG0282|consen 280 RFLKLWDTETGQVLSRF----------------------HLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQE 337 (503)
T ss_pred eeeeeeccccceEEEEE----------------------ecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHH
Confidence 99999999999976433 334568999999988 8899999999999999999999999
Q ss_pred eccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC
Q psy15549 230 LTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 309 (621)
+..|-+.|..+.|-++|+++++.+.|++++||+.+..-.++.+.. .....+.++..+|
T Consensus 338 Yd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~----------------------~~~hsmP~~~~~P 395 (503)
T KOG0282|consen 338 YDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIAD----------------------PEMHTMPCLTLHP 395 (503)
T ss_pred HHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcc----------------------hhhccCcceecCC
Confidence 989999999999999999999999999999999988765544321 1112346899999
Q ss_pred CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcc--cceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQ--YYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 310 dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
+++++++-+ .|..+.++.+...+.... ...+.+|. ++...+.|+| +|++|++|
T Consensus 396 ~~~~~~aQs-----~dN~i~ifs~~~~~r~nk----kK~feGh~vaGys~~v~fSp----------------DG~~l~SG 450 (503)
T KOG0282|consen 396 NGKWFAAQS-----MDNYIAIFSTVPPFRLNK----KKRFEGHSVAGYSCQVDFSP----------------DGRTLCSG 450 (503)
T ss_pred CCCeehhhc-----cCceEEEEecccccccCH----hhhhcceeccCceeeEEEcC----------------CCCeEEee
Confidence 999999988 888888888665443321 22233443 3444556665 89999999
Q ss_pred EcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCC-CeEEEEeCCCcEEEEE
Q psy15549 388 ATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDG-KVLIASSTDGYCSIIS 440 (621)
Q Consensus 388 ~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg-~~l~s~s~dg~i~iw~ 440 (621)
..+|.+.+||..+.+.+..+. +|...+..+.|+|.. ..+|||+.||.|++|+
T Consensus 451 dsdG~v~~wdwkt~kl~~~lk-ah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 451 DSDGKVNFWDWKTTKLVSKLK-AHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred cCCccEEEeechhhhhhhccc-cCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 999999999999999998884 699999999999965 4799999999999996
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=243.41 Aligned_cols=288 Identities=21% Similarity=0.370 Sum_probs=231.2
Q ss_pred ccccccccCcEEEEEEccC-CCEEEEEc-CCceEEEEeccCccccccceecccc-cccCCCeEEEEECCCCCEEEEEeCC
Q psy15549 74 ASDLSRHQKAVNVVRFSPN-GELLASGD-DVGKEIWYLTERESGIANVEFASDL-SRHQKAVNVVRFSPNGELLASGDDE 150 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spd-g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~i~~sp~g~~l~s~s~d 150 (621)
...+.+|.+.|..++|+|- |.+||+|+ |..|++|+...+. .+.+...+ .+|+..|..++|+|.|++||+++.|
T Consensus 7 ~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~----s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD 82 (312)
T KOG0645|consen 7 EQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGD----SWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFD 82 (312)
T ss_pred EEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCC----cEEEEEeccccchheeeeeeecCCCcEEEEeecc
Confidence 4568999999999999998 99999988 8899999998532 12333333 4699999999999999999999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC---cEE
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG---KNL 227 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~---~~~ 227 (621)
.++.||.-..+. |++...+.+|...|.|++|+++|++||+++.|..|.||.+..+ +++
T Consensus 83 ~t~~Iw~k~~~e-------------------fecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~ 143 (312)
T KOG0645|consen 83 ATVVIWKKEDGE-------------------FECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECI 143 (312)
T ss_pred ceEEEeecCCCc-------------------eeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEE
Confidence 999999865443 4456889999999999999999999999999999999998743 567
Q ss_pred EEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccC---ceeeeecccCCCCCCCccccccccccccccCCcccceee
Q psy15549 228 GILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQS---KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 304 (621)
..++.|...|..+.|+|....|++++.|.+|++|+-.. -.+.+++. .+...+.+
T Consensus 144 aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~-----------------------g~~~TVW~ 200 (312)
T KOG0645|consen 144 AVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLD-----------------------GHENTVWS 200 (312)
T ss_pred eeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEec-----------------------CccceEEE
Confidence 78899999999999999999999999999999998762 23444443 33345678
Q ss_pred eeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEE
Q psy15549 305 LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIV 384 (621)
Q Consensus 305 ~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 384 (621)
++|++.|..|++++
T Consensus 201 ~~F~~~G~rl~s~s------------------------------------------------------------------ 214 (312)
T KOG0645|consen 201 LAFDNIGSRLVSCS------------------------------------------------------------------ 214 (312)
T ss_pred EEecCCCceEEEec------------------------------------------------------------------
Confidence 88888887777766
Q ss_pred EEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC-------cCCcccCCCCCcc
Q psy15549 385 IAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN-------EIGIPYVPPSGEE 457 (621)
Q Consensus 385 ~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~-------~~~~~~~~~~~~~ 457 (621)
.|++++||-... .+...|...+..++|. ...|++++.|+.|++|.-..+ .+...-..|...+
T Consensus 215 ----dD~tv~Iw~~~~-----~~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dV 283 (312)
T KOG0645|consen 215 ----DDGTVSIWRLYT-----DLSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDV 283 (312)
T ss_pred ----CCcceEeeeecc-----CcchhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhccccccc
Confidence 455555555332 1224588899999998 447999999999999987753 1222345577789
Q ss_pred cccCCCCC-CCCcccCCCcccHHHhccc
Q psy15549 458 SKENDPTK-GEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 458 ~~~~~~~~-~~~~~s~~~~~~~~~w~~~ 484 (621)
+.+.+.|. ...++++++||.+++|.++
T Consensus 284 NsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 284 NSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred ceEEEcCCCCCceeecCCCceEEEEEec
Confidence 99999995 5689999999999999764
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=250.40 Aligned_cols=293 Identities=19% Similarity=0.270 Sum_probs=243.5
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
.-.+.+|.+.|+.+.|+|+|.+||+|+ |..|.+|++.... +....+.+|.+.|..+.|.+|++.|++++.|.+
T Consensus 40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdc------eN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~ 113 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDC------ENFWVLKGHSGAVMELHGMRDGSHILSCGTDKT 113 (338)
T ss_pred hhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccc------cceeeeccccceeEeeeeccCCCEEEEecCCce
Confidence 445789999999999999999999988 9999999987654 445667799999999999999999999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEec
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST-HLISGSVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~-~l~s~~~dg~i~vwd~~~~~~~~~~~ 231 (621)
|+.||+++++.. +.+.+|..-|..+.-+.-|. ++.+++.|+++++||+++..+++++.
T Consensus 114 v~~wD~~tG~~~---------------------rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~ 172 (338)
T KOG0265|consen 114 VRGWDAETGKRI---------------------RKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE 172 (338)
T ss_pred EEEEecccceee---------------------ehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc
Confidence 999999999976 55678999999998555554 56678889999999999999888874
Q ss_pred cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC
Q psy15549 232 EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 311 (621)
....++++.|...+..+.+|+-|+.|++||++....+..+.++ ...|+.+..+|+|
T Consensus 173 -~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh-----------------------~DtIt~lsls~~g 228 (338)
T KOG0265|consen 173 -NKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGH-----------------------ADTITGLSLSRYG 228 (338)
T ss_pred -cceeEEEEEecccccceeeccccCceeeeccccCcceEEeecc-----------------------cCceeeEEeccCC
Confidence 4667999999999999999999999999999998888877644 4456999999999
Q ss_pred CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
.++.+-+ .|.++++|+++... | ...
T Consensus 229 s~llsns-----Md~tvrvwd~rp~~-------------------------p-------------------------~~R 253 (338)
T KOG0265|consen 229 SFLLSNS-----MDNTVRVWDVRPFA-------------------------P-------------------------SQR 253 (338)
T ss_pred Ccccccc-----ccceEEEEEecccC-------------------------C-------------------------CCc
Confidence 9999877 77777777765211 0 111
Q ss_pred cEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCccc
Q psy15549 392 NILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRS 471 (621)
Q Consensus 392 ~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 471 (621)
.|.|+.-.. .........++|+|+++++..|+.|..+++||..+..++..+++|.+.+..+.|+|....+.+
T Consensus 254 ~v~if~g~~--------hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils 325 (338)
T KOG0265|consen 254 CVKIFQGHI--------HNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILS 325 (338)
T ss_pred eEEEeecch--------hhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEE
Confidence 122221000 011234667899999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccHHH
Q psy15549 472 EDKPRSAEQ 480 (621)
Q Consensus 472 ~~~~~~~~~ 480 (621)
.+.|.++++
T Consensus 326 ~~sdk~i~l 334 (338)
T KOG0265|consen 326 CSSDKTIYL 334 (338)
T ss_pred eccCceeEe
Confidence 999988765
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=259.46 Aligned_cols=276 Identities=22% Similarity=0.351 Sum_probs=227.7
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
..+|+|+.+..+ .+++|..|.+|+ |||.++...... +.||++.|.|+.|.
T Consensus 197 skgVYClQYDD~-------kiVSGlrDnTik--------------iWD~n~~~c~~~-------L~GHtGSVLCLqyd-- 246 (499)
T KOG0281|consen 197 SKGVYCLQYDDE-------KIVSGLRDNTIK--------------IWDKNSLECLKI-------LTGHTGSVLCLQYD-- 246 (499)
T ss_pred CCceEEEEecch-------hhhcccccCceE--------------EeccccHHHHHh-------hhcCCCcEEeeecc--
Confidence 457999998754 789999999999 999887766544 99999999999986
Q ss_pred CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 93 GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 93 g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
.+.|++|+ |.+|+|||+.++ +++.++-+|...|..+.|+ ..++++++.|.+|.+||+.....+.
T Consensus 247 ~rviisGSSDsTvrvWDv~tg-------e~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it------ 311 (499)
T KOG0281|consen 247 ERVIVSGSSDSTVRVWDVNTG-------EPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDIT------ 311 (499)
T ss_pred ceEEEecCCCceEEEEeccCC-------chhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHH------
Confidence 45888988 899999999998 7888999999999999996 4599999999999999998876432
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEE
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s 251 (621)
+...+.||...|..+.|+ .+++++++.|.+|++|++.+++.+.++.+|...|.|+.+. |+++++
T Consensus 312 ------------~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr--~rlvVS 375 (499)
T KOG0281|consen 312 ------------LRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVS 375 (499)
T ss_pred ------------HHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceehhcc--CeEEEe
Confidence 236788999999999996 4599999999999999999999999999999999998876 899999
Q ss_pred EeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcce
Q psy15549 252 LSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPI 331 (621)
Q Consensus 252 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~ 331 (621)
|++|.+|++||+..|.+++.+.+| ..-|+++.|. .
T Consensus 376 GSSDntIRlwdi~~G~cLRvLeGH-----------------------EeLvRciRFd--~-------------------- 410 (499)
T KOG0281|consen 376 GSSDNTIRLWDIECGACLRVLEGH-----------------------EELVRCIRFD--N-------------------- 410 (499)
T ss_pred cCCCceEEEEeccccHHHHHHhch-----------------------HHhhhheeec--C--------------------
Confidence 999999999999999888776533 2234555552 2
Q ss_pred eeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc---------
Q psy15549 332 SVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS--------- 402 (621)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--------- 402 (621)
..+++|+.||+|++||+..+.
T Consensus 411 --------------------------------------------------krIVSGaYDGkikvWdl~aaldpra~~~~~ 440 (499)
T KOG0281|consen 411 --------------------------------------------------KRIVSGAYDGKIKVWDLQAALDPRAPASTL 440 (499)
T ss_pred --------------------------------------------------ceeeeccccceEEEEecccccCCcccccch
Confidence 445555566666667665543
Q ss_pred eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCC
Q psy15549 403 PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIG 447 (621)
Q Consensus 403 ~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~ 447 (621)
++..+ ..|.+.|..+.| |...+++++.|.+|.|||+.++...
T Consensus 441 Cl~~l-v~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 441 CLRTL-VEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred HHHhh-hhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCcc
Confidence 22233 248889999999 6678999999999999999977543
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=242.89 Aligned_cols=297 Identities=16% Similarity=0.274 Sum_probs=247.3
Q ss_pred ccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCc
Q psy15549 4 TIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA 83 (621)
Q Consensus 4 ~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~ 83 (621)
+.|..-.+|..||..++|||-.. .+++|++++.||.-. +-+-.++.- +.++.+|.+.
T Consensus 5 ~~pl~c~ghtrpvvdl~~s~itp--~g~flisa~kd~~pm--------------lr~g~tgdw-------igtfeghkga 61 (334)
T KOG0278|consen 5 QTPLTCHGHTRPVVDLAFSPITP--DGYFLISASKDGKPM--------------LRNGDTGDW-------IGTFEGHKGA 61 (334)
T ss_pred cCceEEcCCCcceeEEeccCCCC--CceEEEEeccCCCch--------------hccCCCCCc-------EEeeeccCcc
Confidence 45667777999999999997442 346999999999887 655555443 4569999999
Q ss_pred EEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 84 VNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 84 V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
|.+.....+....|+++ |-.-++|+.-++ ..++.+ .|..-|.+++|+.|.++|++|+.+..+||||++..+
T Consensus 62 vw~~~l~~na~~aasaaadftakvw~a~tg-------delhsf-~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~ 133 (334)
T KOG0278|consen 62 VWSATLNKNATRAASAAADFTAKVWDAVTG-------DELHSF-EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK 133 (334)
T ss_pred eeeeecCchhhhhhhhcccchhhhhhhhhh-------hhhhhh-hhhheeeeEEecccchhhhccchHHHhhhhhccCCC
Confidence 99999999988888887 778899999887 445554 478899999999999999999999999999998776
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~ 242 (621)
.. ...+.+|.+.|..+.|+...+.+++++.|++|++||.+++..++++. ...+|+++.+
T Consensus 134 Ap--------------------p~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEv 192 (334)
T KOG0278|consen 134 AP--------------------PKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEV 192 (334)
T ss_pred CC--------------------chhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceee
Confidence 43 25568999999999999988899999999999999999999999985 5677999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
+++|++|.++ ..+.|.+||..+...++.+. +...|.+..++|+...+++
T Consensus 193 s~dG~ilTia-~gssV~Fwdaksf~~lKs~k------------------------~P~nV~SASL~P~k~~fVa------ 241 (334)
T KOG0278|consen 193 SQDGRILTIA-YGSSVKFWDAKSFGLLKSYK------------------------MPCNVESASLHPKKEFFVA------ 241 (334)
T ss_pred ccCCCEEEEe-cCceeEEeccccccceeecc------------------------CccccccccccCCCceEEe------
Confidence 9999977654 56789999999988877653 3344566677776654444
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
|++|..++.||..++.
T Consensus 242 ----------------------------------------------------------------Gged~~~~kfDy~Tge 257 (334)
T KOG0278|consen 242 ----------------------------------------------------------------GGEDFKVYKFDYNTGE 257 (334)
T ss_pred ----------------------------------------------------------------cCcceEEEEEeccCCc
Confidence 4478899999999999
Q ss_pred eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCC
Q psy15549 403 PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIG 447 (621)
Q Consensus 403 ~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~ 447 (621)
.+.....+|.++|.|+.|+|||...++||.||+|+||.+..++..
T Consensus 258 Ei~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 258 EIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred eeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 888876789999999999999999999999999999998866543
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=298.94 Aligned_cols=300 Identities=15% Similarity=0.247 Sum_probs=222.0
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccccc-ceeeccccccccCcEEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIA-NVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~-~~~~~~~~~~h~~~V~~l~ 88 (621)
..|.+.|++++|+|+++ +||+|+.|+.|+ ||+......... ...+...+. +...|.+++
T Consensus 480 ~~~~~~V~~i~fs~dg~-----~latgg~D~~I~--------------iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~ 539 (793)
T PLN00181 480 LNSSNLVCAIGFDRDGE-----FFATAGVNKKIK--------------IFECESIIKDGRDIHYPVVELA-SRSKLSGIC 539 (793)
T ss_pred cCCCCcEEEEEECCCCC-----EEEEEeCCCEEE--------------EEECCcccccccccccceEEec-ccCceeeEE
Confidence 34888999999999998 999999999999 777643210000 000111222 346899999
Q ss_pred Ecc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 89 FSP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 89 ~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
|++ ++.+|++++ |+.|++||+..+ ..+..+.+|...|++++|+| ++.+|++|+.||+|++||+.++..+
T Consensus 540 ~~~~~~~~las~~~Dg~v~lWd~~~~-------~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~- 611 (793)
T PLN00181 540 WNSYIKSQVASSNFEGVVQVWDVARS-------QLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSI- 611 (793)
T ss_pred eccCCCCEEEEEeCCCeEEEEECCCC-------eEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEE-
Confidence 987 478899888 999999999876 56677889999999999997 7899999999999999999887643
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEEC-CCCCEEEEEeCCCeEEEEECCCCc-EEEEeccCCcceEEEEEc
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS-PTSTHLISGSVDNTAIMWDVHKGK-NLGILTEHKKFVQGVAWD 243 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s-pd~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~l~~s 243 (621)
..+.. ...|.++.|+ +++.+|++|+.||.|++||+++.. .+..+.+|...|.++.|.
T Consensus 612 --------------------~~~~~-~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~ 670 (793)
T PLN00181 612 --------------------GTIKT-KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV 670 (793)
T ss_pred --------------------EEEec-CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe
Confidence 33333 3579999995 579999999999999999998765 567778999999999997
Q ss_pred CCCCEEEEEeCCCcEEEEEccCce------eeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 244 PKNQYVATLSSDRSLRTYSIQSKK------VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 244 p~~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
++.+|++++.|++|++||++... .+..+ ..+...+..++|+|++.+|+++
T Consensus 671 -~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~-----------------------~gh~~~i~~v~~s~~~~~lasg 726 (793)
T PLN00181 671 -DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSF-----------------------MGHTNVKNFVGLSVSDGYIATG 726 (793)
T ss_pred -CCCEEEEEECCCEEEEEeCCCCccccCCcceEEE-----------------------cCCCCCeeEEEEcCCCCEEEEE
Confidence 68899999999999999997532 22222 2334456778888888888877
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEe
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYD 397 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 397 (621)
+ .|+.+.+|+..... .+..|.
T Consensus 727 s-----~D~~v~iw~~~~~~------------------------------------------------------~~~s~~ 747 (793)
T PLN00181 727 S-----ETNEVFVYHKAFPM------------------------------------------------------PVLSYK 747 (793)
T ss_pred e-----CCCEEEEEECCCCC------------------------------------------------------ceEEEe
Confidence 7 66666666532100 000000
Q ss_pred CCCCceeEE-EecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 398 TQHASPFAF-IANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 398 ~~~~~~~~~-~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
......+.. ....|...|.+++|+|++..|++|+.||.|+||++
T Consensus 748 ~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 748 FKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred cccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 000000000 01235567999999999999999999999999996
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=267.03 Aligned_cols=286 Identities=28% Similarity=0.444 Sum_probs=248.1
Q ss_pred cccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcE
Q psy15549 75 SDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTI 153 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i 153 (621)
..+.+|.+.|.+++|+|++++|++++ ++.+.+|++... .....+..|...+..+.|+|++++|++++.||.|
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 75 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETG-------ELLRTLKGHTGPVRDVAASADGTYLASGSSDKTI 75 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCC-------CcEEEEecCCcceeEEEECCCCCEEEEEcCCCeE
Confidence 35779999999999999999999988 889999999876 3455677888999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH 233 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 233 (621)
++|++.+++.. ..+..|...+.++.|+++++++++++.++.|.+||+.+++....+..|
T Consensus 76 ~i~~~~~~~~~---------------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 134 (289)
T cd00200 76 RLWDLETGECV---------------------RTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGH 134 (289)
T ss_pred EEEEcCcccce---------------------EEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccC
Confidence 99999886543 455688889999999999888888888999999999989988888889
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
...+.+++|+|++.++++++.|+.|++||+++++.+..+. .+...+.++.|+|+++.
T Consensus 135 ~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~-----------------------~~~~~i~~~~~~~~~~~ 191 (289)
T cd00200 135 TDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLT-----------------------GHTGEVNSVAFSPDGEK 191 (289)
T ss_pred CCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEe-----------------------cCccccceEEECCCcCE
Confidence 9999999999999999888889999999998777665543 22335678888888877
Q ss_pred EEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcE
Q psy15549 314 LIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNI 393 (621)
Q Consensus 314 l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 393 (621)
+++++ .++.|
T Consensus 192 l~~~~----------------------------------------------------------------------~~~~i 201 (289)
T cd00200 192 LLSSS----------------------------------------------------------------------SDGTI 201 (289)
T ss_pred EEEec----------------------------------------------------------------------CCCcE
Confidence 76654 47889
Q ss_pred EEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCC
Q psy15549 394 LLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSED 473 (621)
Q Consensus 394 ~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 473 (621)
++||+..++.+..+. .|...+.+++|+|++.++++++.||.|++|++.++.....+..+...+..+.+++++..+++++
T Consensus 202 ~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 280 (289)
T cd00200 202 KLWDLSTGKCLGTLR-GHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGS 280 (289)
T ss_pred EEEECCCCceecchh-hcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEec
Confidence 999998888777763 5888999999999988888888899999999999888888888888899999999999999999
Q ss_pred CcccHHHhc
Q psy15549 474 KPRSAEQAK 482 (621)
Q Consensus 474 ~~~~~~~w~ 482 (621)
.++.+++|+
T Consensus 281 ~d~~i~iw~ 289 (289)
T cd00200 281 ADGTIRIWD 289 (289)
T ss_pred CCCeEEecC
Confidence 999999885
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=256.11 Aligned_cols=291 Identities=20% Similarity=0.252 Sum_probs=241.4
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
...+..|.+.|..+.||++|++||+++ |.+..+|.+..... ++..+++.+|..+|..+.||||.++|++|+.|..
T Consensus 217 ~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~----~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~ 292 (519)
T KOG0293|consen 217 WQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH----FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEV 292 (519)
T ss_pred hhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc----eeeeeeeecccCceEEEEECCCCCeEEecCchHh
Confidence 456889999999999999999999999 88899999876642 5778899999999999999999999999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 232 (621)
+.+||+.++.....+ -.++...+.+++|.|||..+++|+.|+.+..||+. |..+...++
T Consensus 293 ~~lwDv~tgd~~~~y--------------------~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~g 351 (519)
T KOG0293|consen 293 LSLWDVDTGDLRHLY--------------------PSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEG 351 (519)
T ss_pred eeeccCCcchhhhhc--------------------ccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccc
Confidence 999999999876444 23466889999999999999999999999999984 555555544
Q ss_pred C-CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC
Q psy15549 233 H-KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 233 ~-~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 311 (621)
- ...|.+++..+||+++++.+.|..|++|+..+......+ ....+|+++.+|.||
T Consensus 352 vr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~li------------------------se~~~its~~iS~d~ 407 (519)
T KOG0293|consen 352 VRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLI------------------------SEEQPITSFSISKDG 407 (519)
T ss_pred cccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccc------------------------cccCceeEEEEcCCC
Confidence 3 346899999999999999999999999998775443222 123467899999999
Q ss_pred CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
+++++.- .+.
T Consensus 408 k~~LvnL----------------------------------------------------------------------~~q 417 (519)
T KOG0293|consen 408 KLALVNL----------------------------------------------------------------------QDQ 417 (519)
T ss_pred cEEEEEc----------------------------------------------------------------------ccC
Confidence 8887643 456
Q ss_pred cEEEEeCCCCceeEEEecccccc--eEEEEEcC-CCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCC-
Q psy15549 392 NILLYDTQHASPFAFIANIHYTK--LTDITWSS-DGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGE- 467 (621)
Q Consensus 392 ~i~iwd~~~~~~~~~~~~~h~~~--v~~~~~sp-dg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 467 (621)
.|++||+...+.+..+. ||... +..-||.- +..++++||.|+.|+||+..+|.++..+.+|...++++.+.|...
T Consensus 418 ei~LWDl~e~~lv~kY~-Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~ 496 (519)
T KOG0293|consen 418 EIHLWDLEENKLVRKYF-GHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPE 496 (519)
T ss_pred eeEEeecchhhHHHHhh-cccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHH
Confidence 78888888777666663 46543 44445543 457999999999999999999999999999999999999988665
Q ss_pred CcccCCCcccHHHhccc
Q psy15549 468 PVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 468 ~~~s~~~~~~~~~w~~~ 484 (621)
.++++++||+|++|...
T Consensus 497 m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 497 MFASASDDGTIRIWGPS 513 (519)
T ss_pred HhhccCCCCeEEEecCC
Confidence 88999999999999754
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=269.34 Aligned_cols=377 Identities=15% Similarity=0.164 Sum_probs=286.9
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
..++...|+++.=+|--. .+|.|..+|.|. |+++..++.... ++...+.|++++
T Consensus 198 f~~~~s~IT~ieqsPaLD-----VVaiG~~~G~Vi--------------ifNlK~dkil~s-------Fk~d~g~VtslS 251 (910)
T KOG1539|consen 198 FQEFFSRITAIEQSPALD-----VVAIGLENGTVI--------------IFNLKFDKILMS-------FKQDWGRVTSLS 251 (910)
T ss_pred ecccccceeEeccCCcce-----EEEEeccCceEE--------------EEEcccCcEEEE-------EEccccceeEEE
Confidence 345678999999999987 999999999999 888887765443 554469999999
Q ss_pred EccCCCEEE-EEc-CCceEEEEeccCccccccceecccc-cccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 89 FSPNGELLA-SGD-DVGKEIWYLTERESGIANVEFASDL-SRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 89 ~spdg~~la-s~~-d~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
|.-||+.+. +|+ .|.+.+||++.. +....+ ..|.+.|....|.|....+++++.|..+++|=.+++.-..
T Consensus 252 FrtDG~p~las~~~~G~m~~wDLe~k-------kl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~p 324 (910)
T KOG1539|consen 252 FRTDGNPLLASGRSNGDMAFWDLEKK-------KLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVP 324 (910)
T ss_pred eccCCCeeEEeccCCceEEEEEcCCC-------eeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcc
Confidence 999997655 455 566999999986 334443 4799999999999999999999999999999777655433
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEEC-CCCCEEEEEeCCCeEEEEEC-----------------------
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS-PTSTHLISGSVDNTAIMWDV----------------------- 221 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s-pd~~~l~s~~~dg~i~vwd~----------------------- 221 (621)
.+ .+...||..+..|+.|. .+|.++.+++.|++++.+++
T Consensus 325 R~-----------------LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~ 387 (910)
T KOG1539|consen 325 RL-----------------LRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNV 387 (910)
T ss_pred hh-----------------eeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccc
Confidence 22 34456777777777776 46667777777776666554
Q ss_pred ------------------------------------------CCCcE-EEEe-----ccCCcceEEEEEcCCCCEEEEEe
Q psy15549 222 ------------------------------------------HKGKN-LGIL-----TEHKKFVQGVAWDPKNQYVATLS 253 (621)
Q Consensus 222 ------------------------------------------~~~~~-~~~~-----~~~~~~v~~l~~sp~~~~l~s~~ 253 (621)
++... ...+ +.....+++++.++.|++.+.|.
T Consensus 388 ~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~ 467 (910)
T KOG1539|consen 388 FSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGY 467 (910)
T ss_pred cchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEec
Confidence 21111 0111 11235688999999999999999
Q ss_pred CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceee
Q psy15549 254 SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISV 333 (621)
Q Consensus 254 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~ 333 (621)
..|.|.+|++.+|-....+. ....++..|++++...-++.+++++ .+|-++.|+.
T Consensus 468 S~G~Id~fNmQSGi~r~sf~--------------------~~~ah~~~V~gla~D~~n~~~vsa~-----~~Gilkfw~f 522 (910)
T KOG1539|consen 468 SKGTIDRFNMQSGIHRKSFG--------------------DSPAHKGEVTGLAVDGTNRLLVSAG-----ADGILKFWDF 522 (910)
T ss_pred cCCeEEEEEcccCeeecccc--------------------cCccccCceeEEEecCCCceEEEcc-----CcceEEEEec
Confidence 99999999999987766653 2345677889999999999999998 8999999998
Q ss_pred eeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEeccccc
Q psy15549 334 THVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYT 413 (621)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~ 413 (621)
........+. ....+..+.+ ......++++..|-.|+++|..+.+.++.+ .+|.+
T Consensus 523 ~~k~l~~~l~--------l~~~~~~iv~----------------hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f-~gh~n 577 (910)
T KOG1539|consen 523 KKKVLKKSLR--------LGSSITGIVY----------------HRVSDLLAIALDDFSIRVVDVVTRKVVREF-WGHGN 577 (910)
T ss_pred CCcceeeeec--------cCCCcceeee----------------eehhhhhhhhcCceeEEEEEchhhhhhHHh-hcccc
Confidence 6433111100 0111111111 113366788888999999999999988888 57999
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCc-ccHHHhcccCc
Q psy15549 414 KLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKP-RSAEQAKGEGK 486 (621)
Q Consensus 414 ~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~~~~w~~~~~ 486 (621)
.|++++|||||++|++++.|++|++||+.++.++..+.... ....+.++|.|..+++...| ..|++|.....
T Consensus 578 ritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~-~~~sls~SPngD~LAT~Hvd~~gIylWsNksl 650 (910)
T KOG1539|consen 578 RITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDS-PCTSLSFSPNGDFLATVHVDQNGIYLWSNKSL 650 (910)
T ss_pred ceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCC-cceeeEECCCCCEEEEEEecCceEEEEEchhH
Confidence 99999999999999999999999999999999988776544 66778999999999999776 77889975443
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-33 Score=241.91 Aligned_cols=316 Identities=16% Similarity=0.225 Sum_probs=242.0
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
.+..|+.++.+.+|+|||. ++|||+.|..|+++|+...-... +.-++..+.. .....+++++-.|.+.|+++
T Consensus 107 ylt~HK~~cR~aafs~DG~-----lvATGsaD~SIKildvermlaks--~~~em~~~~~-qa~hPvIRTlYDH~devn~l 178 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGS-----LVATGSADASIKILDVERMLAKS--KPKEMISGDT-QARHPVIRTLYDHVDEVNDL 178 (430)
T ss_pred EEeecccceeeeeeCCCCc-----EEEccCCcceEEEeehhhhhhhc--chhhhccCCc-ccCCceEeehhhccCcccce
Confidence 4566999999999999999 99999999999966665211000 0111112211 11244677899999999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
.|+|...+|++|+ |++|+++|+..... +.....-....+|.++.|+|.|.+|+.|....++++||+.+-++...
T Consensus 179 ~FHPre~ILiS~srD~tvKlFDfsK~sa-----KrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvs 253 (430)
T KOG0640|consen 179 DFHPRETILISGSRDNTVKLFDFSKTSA-----KRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVS 253 (430)
T ss_pred eecchhheEEeccCCCeEEEEecccHHH-----HHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeee
Confidence 9999999999999 99999999986532 22222223456899999999999999999999999999999876422
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCC-cceEEEEEcC
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT-EHK-KFVQGVAWDP 244 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~-~~v~~l~~sp 244 (621)
- .--.+|.+.|+++.+++.|++.++++.||.|++||--+++++.++. .|. ..|.+..|..
T Consensus 254 a------------------nPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftk 315 (430)
T KOG0640|consen 254 A------------------NPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTK 315 (430)
T ss_pred c------------------CcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEcc
Confidence 1 1224799999999999999999999999999999999999998884 454 4788999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCC
Q psy15549 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENS 324 (621)
Q Consensus 245 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~ 324 (621)
+|+|+++.+.|..+++|.+.+++.+..+.+....-...+ -+...|+....|++.
T Consensus 316 n~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~------------------rtqAvFNhtEdyVl~-------- 369 (430)
T KOG0640|consen 316 NGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKH------------------RTQAVFNHTEDYVLF-------- 369 (430)
T ss_pred CCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhh------------------hhhhhhcCccceEEc--------
Confidence 999999999999999999999998877653321110000 012233333333332
Q ss_pred CCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE-cCCcEEEEeCCCCce
Q psy15549 325 DSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA-TENNILLYDTQHASP 403 (621)
Q Consensus 325 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~ 403 (621)
-. ..+.+.-||.++...
T Consensus 370 --------------------------------------------------------------pDEas~slcsWdaRtadr 387 (430)
T KOG0640|consen 370 --------------------------------------------------------------PDEASNSLCSWDARTADR 387 (430)
T ss_pred --------------------------------------------------------------cccccCceeeccccchhh
Confidence 22 246788899999887
Q ss_pred eEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 404 FAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 404 ~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
+..+..+|.+.+..+.-||.+.-++||+.|-.+|+|--.
T Consensus 388 ~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 388 VALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred hhhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence 777777899999999999999999999999999999643
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=228.37 Aligned_cols=285 Identities=18% Similarity=0.212 Sum_probs=237.3
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
++-.|+++|.++.|+-||. |.++++.|.+|+ +|+...+...+ ++.+|...|..+
T Consensus 12 ~l~~~qgaV~avryN~dGn-----Y~ltcGsdrtvr--------------LWNp~rg~lik-------tYsghG~EVlD~ 65 (307)
T KOG0316|consen 12 ILDCAQGAVRAVRYNVDGN-----YCLTCGSDRTVR--------------LWNPLRGALIK-------TYSGHGHEVLDA 65 (307)
T ss_pred eecccccceEEEEEccCCC-----EEEEcCCCceEE--------------eecccccceee-------eecCCCceeeec
Confidence 5677999999999999998 999999999999 99988776644 599999999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
+.+.|...+++|+ |..+.+||+.++ +..+.+.+|.+.|+.++|+.+...+++|+.|.++++||.++....
T Consensus 66 ~~s~Dnskf~s~GgDk~v~vwDV~TG-------kv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~e-- 136 (307)
T KOG0316|consen 66 ALSSDNSKFASCGGDKAVQVWDVNTG-------KVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFE-- 136 (307)
T ss_pred cccccccccccCCCCceEEEEEcccC-------eeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCC--
Confidence 9999998888876 999999999998 889999999999999999999999999999999999999887543
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCC
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKN 246 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~ 246 (621)
+.+.+......|.++..+ +..+++|+.||+++.||++.|+..... ...+|++++|++++
T Consensus 137 -----------------PiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sDy--~g~pit~vs~s~d~ 195 (307)
T KOG0316|consen 137 -----------------PIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSDY--FGHPITSVSFSKDG 195 (307)
T ss_pred -----------------ccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeecceeehhh--cCCcceeEEecCCC
Confidence 246667778889999886 557999999999999999999876554 34679999999999
Q ss_pred CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCC
Q psy15549 247 QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDS 326 (621)
Q Consensus 247 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~ 326 (621)
+..+.++-|+++++.|-.+|+++..+.++..... -...+++.
T Consensus 196 nc~La~~l~stlrLlDk~tGklL~sYkGhkn~ey---------------------kldc~l~q----------------- 237 (307)
T KOG0316|consen 196 NCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEY---------------------KLDCCLNQ----------------- 237 (307)
T ss_pred CEEEEeeccceeeecccchhHHHHHhccccccee---------------------eeeeeecc-----------------
Confidence 9999999999999999999999888765532110 01111111
Q ss_pred CCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEE
Q psy15549 327 TRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAF 406 (621)
Q Consensus 327 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 406 (621)
.+..++++++||.+++||+.....+..
T Consensus 238 -----------------------------------------------------sdthV~sgSEDG~Vy~wdLvd~~~~sk 264 (307)
T KOG0316|consen 238 -----------------------------------------------------SDTHVFSGSEDGKVYFWDLVDETQISK 264 (307)
T ss_pred -----------------------------------------------------cceeEEeccCCceEEEEEeccceeeee
Confidence 235677788999999999999998888
Q ss_pred Eecccccc-eEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 407 IANIHYTK-LTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 407 ~~~~h~~~-v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
+.. +... |++++++|.-..|+++. ++.+.+|.-
T Consensus 265 ~~~-~~~v~v~dl~~hp~~~~f~~A~-~~~~~~~~~ 298 (307)
T KOG0316|consen 265 LSV-VSTVIVTDLSCHPTMDDFITAT-GHGDLFWYQ 298 (307)
T ss_pred ecc-CCceeEEeeecccCccceeEec-CCceeceee
Confidence 853 5555 89999999988788775 445666653
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=261.79 Aligned_cols=253 Identities=19% Similarity=0.305 Sum_probs=221.1
Q ss_pred CccccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccc
Q psy15549 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRH 80 (621)
Q Consensus 1 m~~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h 80 (621)
|++...+....|.+.|-|+.|+|..+ .++++-.+|.|. ||+.+++...+ .+.-.
T Consensus 1 ~~l~~krk~~~rSdRVKsVd~HPteP-----w~la~LynG~V~--------------IWnyetqtmVk-------sfeV~ 54 (794)
T KOG0276|consen 1 MKLDFKRKFQSRSDRVKSVDFHPTEP-----WILAALYNGDVQ--------------IWNYETQTMVK-------SFEVS 54 (794)
T ss_pred CcchhhhHhhccCCceeeeecCCCCc-----eEEEeeecCeeE--------------EEecccceeee-------eeeec
Confidence 55555566666889999999999998 999999999999 99988776543 36677
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEcc
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
.-+|.+..|-..-+++++|+ |..|+||+..+. ..++.+..|.+.|.+++.+|...++++++.|-+|++||.+
T Consensus 55 ~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~-------ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we 127 (794)
T KOG0276|consen 55 EVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTG-------EKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWE 127 (794)
T ss_pred ccchhhheeeeccceEEEecCCceEEEEecccc-------eeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeecc
Confidence 78999999999999999999 677999999988 7789999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceE
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ 238 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 238 (621)
.. |.+.+.+.+|...|.+++|+| |.+.+|+++.|++|+||.+.+..+..++.+|...|.
T Consensus 128 ~~--------------------wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN 187 (794)
T KOG0276|consen 128 NE--------------------WACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVN 187 (794)
T ss_pred Cc--------------------eeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcc
Confidence 65 556788999999999999999 778999999999999999999999999999999999
Q ss_pred EEEEcCCC--CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 239 GVAWDPKN--QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 239 ~l~~sp~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
|+.|-+.| .+|++|+.|.+|+|||..+..+++++.+|.. .|..+.|+|.=..+++
T Consensus 188 ~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~-----------------------Nvs~v~fhp~lpiiis 244 (794)
T KOG0276|consen 188 CVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTN-----------------------NVSFVFFHPELPIIIS 244 (794)
T ss_pred eEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccc-----------------------cceEEEecCCCcEEEE
Confidence 99998855 6899999999999999999999998875544 4477888888777777
Q ss_pred ccccccCCCCCCcceeee
Q psy15549 317 PSGCLENSDSTRKPISVT 334 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~ 334 (621)
++ .||++++|+..
T Consensus 245 gs-----EDGTvriWhs~ 257 (794)
T KOG0276|consen 245 GS-----EDGTVRIWNSK 257 (794)
T ss_pred ec-----CCccEEEecCc
Confidence 77 56666666544
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=245.38 Aligned_cols=295 Identities=19% Similarity=0.303 Sum_probs=244.1
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccccc-ceeeccccccccCcEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIA-NVEFASDLSRHQKAVN 85 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~-~~~~~~~~~~h~~~V~ 85 (621)
.|.++.+.-+.|..|||||+ +|++|+.||.|. +|+..+++.... .+.....+.-+..+|.
T Consensus 207 ~IKFg~KSh~EcA~FSPDgq-----yLvsgSvDGFiE--------------VWny~~GKlrKDLkYQAqd~fMMmd~aVl 267 (508)
T KOG0275|consen 207 SIKFGQKSHVECARFSPDGQ-----YLVSGSVDGFIE--------------VWNYTTGKLRKDLKYQAQDNFMMMDDAVL 267 (508)
T ss_pred heecccccchhheeeCCCCc-----eEeeccccceee--------------eehhccchhhhhhhhhhhcceeecccceE
Confidence 35667788899999999999 999999999999 888887765331 2222334566889999
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceeccccc-ccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLS-RHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
|+.||.|..+||+|+ |+.|++|.+.++ .+++.+. .|+..|+|+.|+.|+..+++++.|.++++.-+.++++
T Consensus 268 ci~FSRDsEMlAsGsqDGkIKvWri~tG-------~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~ 340 (508)
T KOG0275|consen 268 CISFSRDSEMLASGSQDGKIKVWRIETG-------QCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKC 340 (508)
T ss_pred EEeecccHHHhhccCcCCcEEEEEEecc-------hHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchh
Confidence 999999999999999 999999999998 6777776 7999999999999999999999999999999999998
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc--CCcceEEEE
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE--HKKFVQGVA 241 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~l~ 241 (621)
+ +.+.+|.+.|+.+.|.+||.++++++.||+|++|+..+.+++.+++. ...+|.++-
T Consensus 341 L---------------------KEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~ 399 (508)
T KOG0275|consen 341 L---------------------KEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVI 399 (508)
T ss_pred H---------------------HHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEE
Confidence 6 55689999999999999999999999999999999999999998865 345677777
Q ss_pred EcCC-CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 242 WDPK-NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 242 ~sp~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
.-|. ...+++|...++|.|.++ .|+.++.+..... -.+...+.+.||.|.
T Consensus 400 ~~PKnpeh~iVCNrsntv~imn~-qGQvVrsfsSGkR--------------------EgGdFi~~~lSpkGe-------- 450 (508)
T KOG0275|consen 400 LLPKNPEHFIVCNRSNTVYIMNM-QGQVVRSFSSGKR--------------------EGGDFINAILSPKGE-------- 450 (508)
T ss_pred EcCCCCceEEEEcCCCeEEEEec-cceEEeeeccCCc--------------------cCCceEEEEecCCCc--------
Confidence 7774 467888999999999998 4666665532211 112223444455544
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
++.+.++|+.++.|...+
T Consensus 451 --------------------------------------------------------------wiYcigED~vlYCF~~~s 468 (508)
T KOG0275|consen 451 --------------------------------------------------------------WIYCIGEDGVLYCFSVLS 468 (508)
T ss_pred --------------------------------------------------------------EEEEEccCcEEEEEEeec
Confidence 455556889999999999
Q ss_pred CceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 401 ASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 401 ~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
|+....+. .|...|..++-+|-.+.||+-+.||.+++|.
T Consensus 469 G~LE~tl~-VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 469 GKLERTLP-VHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred Cceeeeee-cccccccccccCcccchhhhhcccchhhhcC
Confidence 99888885 5999999999999999999999999999995
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=234.13 Aligned_cols=309 Identities=17% Similarity=0.278 Sum_probs=247.4
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
.|-++.+|..|++-+.|+.+|. +|.+++.|..+. +|-..+++..- ++.||++.|
T Consensus 2 rpi~l~GHERplTqiKyN~eGD-----LlFscaKD~~~~--------------vw~s~nGerlG-------ty~GHtGav 55 (327)
T KOG0643|consen 2 RPILLQGHERPLTQIKYNREGD-----LLFSCAKDSTPT--------------VWYSLNGERLG-------TYDGHTGAV 55 (327)
T ss_pred CccccccCccccceEEecCCCc-----EEEEecCCCCce--------------EEEecCCceee-------eecCCCceE
Confidence 3567788999999999999998 999999999999 99887776644 499999999
Q ss_pred EEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-----CCcEEEEEc
Q psy15549 85 NVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-----ESTIIVWKQ 158 (621)
Q Consensus 85 ~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-----dg~i~vwd~ 158 (621)
.|+..+-+.+.|++|+ |..+++||+..+ +.+..+. ...+|..+.|+++|++++.+.. .+.|.++|+
T Consensus 56 W~~Did~~s~~liTGSAD~t~kLWDv~tG-------k~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi 127 (327)
T KOG0643|consen 56 WCCDIDWDSKHLITGSADQTAKLWDVETG-------KQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDI 127 (327)
T ss_pred EEEEecCCcceeeeccccceeEEEEcCCC-------cEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEc
Confidence 9999999999999999 999999999998 4454443 4568999999999998887754 467999998
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-EEEeccCCcce
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN-LGILTEHKKFV 237 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v 237 (621)
+....-..- -.+...+..+.+.++.+-|.|-+++|++|..||.|.+||+++|+. +.....|...|
T Consensus 128 ~~~~~~~~s--------------~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~I 193 (327)
T KOG0643|consen 128 RDDSSDIDS--------------EEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKI 193 (327)
T ss_pred cCChhhhcc--------------cCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhcccc
Confidence 854321000 001245566778999999999999999999999999999999854 55557899999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
+.++++++..++++++.|.+-++||+++.++++++.. ..++++.+++|-..+++.+
T Consensus 194 nd~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t------------------------e~PvN~aaisP~~d~Vilg 249 (327)
T KOG0643|consen 194 NDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT------------------------ERPVNTAAISPLLDHVILG 249 (327)
T ss_pred ccccccCCcceEEecccCccceeeeccceeeEEEeee------------------------cccccceecccccceEEec
Confidence 9999999999999999999999999999998888742 3457899999999998888
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE-EcCC--cEE
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV-ATEN--NIL 394 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg--~i~ 394 (621)
+|. +. .+ +-+. ...| .-+
T Consensus 250 GGq----eA----~d---------------------------------------------------VTTT~~r~GKFEAr 270 (327)
T KOG0643|consen 250 GGQ----EA----MD---------------------------------------------------VTTTSTRAGKFEAR 270 (327)
T ss_pred CCc----ee----ee---------------------------------------------------eeeecccccchhhh
Confidence 741 00 00 0000 0111 234
Q ss_pred EEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 395 LYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 395 iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
+|++-..+.+..+ .+|-++|++++|+|+|+..++|+.||.|++..++..-
T Consensus 271 Fyh~i~eEEigrv-kGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~~Y 320 (327)
T KOG0643|consen 271 FYHLIFEEEIGRV-KGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDSNY 320 (327)
T ss_pred HHHHHHHHHhccc-cccccCcceeEECCCCcccccCCCCceEEEEEeccch
Confidence 5665555666666 4799999999999999999999999999999887543
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=230.64 Aligned_cols=276 Identities=21% Similarity=0.254 Sum_probs=239.5
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
...+.+|.++|.++.|+-||+|.++++ |..|++|+...+ .+++++.+|...|..++.+.|...|++|+.|..
T Consensus 10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg-------~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~ 82 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRG-------ALIKTYSGHGHEVLDAALSSDNSKFASCGGDKA 82 (307)
T ss_pred ceeecccccceEEEEEccCCCEEEEcCCCceEEeeccccc-------ceeeeecCCCceeeeccccccccccccCCCCce
Confidence 345789999999999999999998877 999999999988 889999999999999999999999999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC--CcEEEEe
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK--GKNLGIL 230 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~--~~~~~~~ 230 (621)
|.+||+.+++.. +.+.+|.+.|+.+.|+.+...+++|+.|..+++||-++ .++++.+
T Consensus 83 v~vwDV~TGkv~---------------------Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQil 141 (307)
T KOG0316|consen 83 VQVWDVNTGKVD---------------------RRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQIL 141 (307)
T ss_pred EEEEEcccCeee---------------------eecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchh
Confidence 999999999965 66789999999999999999999999999999999875 4678888
Q ss_pred ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 231 TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 231 ~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
......|.++... +..+++|+.||++|.||++.|+...-. ...+|+++.|++|
T Consensus 142 dea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sDy-------------------------~g~pit~vs~s~d 194 (307)
T KOG0316|consen 142 DEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSDY-------------------------FGHPITSVSFSKD 194 (307)
T ss_pred hhhcCceeEEEec--ccEEEeeccCCcEEEEEeecceeehhh-------------------------cCCcceeEEecCC
Confidence 8888889998887 678999999999999999999875433 3456799999999
Q ss_pred CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 311 g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
++..++++ -|
T Consensus 195 ~nc~La~~----------------------------------------------------------------------l~ 204 (307)
T KOG0316|consen 195 GNCSLASS----------------------------------------------------------------------LD 204 (307)
T ss_pred CCEEEEee----------------------------------------------------------------------cc
Confidence 88776654 67
Q ss_pred CcEEEEeCCCCceeEEEecccccc--eEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCc-ccccCCCCCCC
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTK--LTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGE-ESKENDPTKGE 467 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~--v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 467 (621)
+++++.|-.+|+.+... .+|.+. -...+++.....+++|+.||.|++||+.++..+..+..++.. +..+.++|...
T Consensus 205 stlrLlDk~tGklL~sY-kGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~ 283 (307)
T KOG0316|consen 205 STLRLLDKETGKLLKSY-KGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMD 283 (307)
T ss_pred ceeeecccchhHHHHHh-cccccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCcc
Confidence 88999999999988887 457654 345677888889999999999999999999999999888877 77888888877
Q ss_pred CcccCCCc
Q psy15549 468 PVRSEDKP 475 (621)
Q Consensus 468 ~~~s~~~~ 475 (621)
.+..+...
T Consensus 284 ~f~~A~~~ 291 (307)
T KOG0316|consen 284 DFITATGH 291 (307)
T ss_pred ceeEecCC
Confidence 66655443
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=262.60 Aligned_cols=355 Identities=16% Similarity=0.202 Sum_probs=274.9
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
.+++..++..|.++.|+|...+++++- .|.|.||+.++. ..+..+.-...+|.+..|-+..+++++|+.|..
T Consensus 6 krk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetq-------tmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~ 78 (794)
T KOG0276|consen 6 KRKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQ-------TMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQ 78 (794)
T ss_pred hhHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccc-------eeeeeeeecccchhhheeeeccceEEEecCCce
Confidence 445777999999999999999988877 999999999987 777888888899999999999999999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC-cEEEEec
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG-KNLGILT 231 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~-~~~~~~~ 231 (621)
|+||+..+.+.+ ..+..|...|++++.+|...++++++.|-.|++||.+.. .+.+++.
T Consensus 79 IrVfnynt~ekV---------------------~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfe 137 (794)
T KOG0276|consen 79 IRVFNYNTGEKV---------------------KTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFE 137 (794)
T ss_pred EEEEecccceee---------------------EEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEc
Confidence 999999999875 677899999999999999999999999999999999764 6778999
Q ss_pred cCCcceEEEEEcC-CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 232 EHKKFVQGVAWDP-KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 232 ~~~~~v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
+|...|++++|+| |.+.+++++-|++|++|.+.+.....++. .|...|+++.|-+-
T Consensus 138 GH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~-----------------------gHekGVN~Vdyy~~ 194 (794)
T KOG0276|consen 138 GHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLE-----------------------GHEKGVNCVDYYTG 194 (794)
T ss_pred CcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeee-----------------------ccccCcceEEeccC
Confidence 9999999999999 55889999999999999998766555554 34445566766543
Q ss_pred CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 311 g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
| +..++++|+.|
T Consensus 195 g--------------------------------------------------------------------dkpylIsgaDD 206 (794)
T KOG0276|consen 195 G--------------------------------------------------------------------DKPYLISGADD 206 (794)
T ss_pred C--------------------------------------------------------------------CcceEEecCCC
Confidence 3 12456777789
Q ss_pred CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcc
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVR 470 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (621)
..|+|||..+..+++++ .||...|..++|+|.-..++|||.||+++||+-.+-++...+.-....+.++...+.+..++
T Consensus 207 ~tiKvWDyQtk~CV~TL-eGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~ 285 (794)
T KOG0276|consen 207 LTIKVWDYQTKSCVQTL-EGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIA 285 (794)
T ss_pred ceEEEeecchHHHHHHh-hcccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEE
Confidence 99999999999999998 57999999999999999999999999999999999888888877777788887777766666
Q ss_pred cCCCcccHHHhcccCccccccccCCCCCCCccCcccccceeeecccccccccchhhhhccccccCCCChhcccccCCCCC
Q psy15549 471 SEDKPRSAEQAKGEGKVLGEKQTGNKVSPTDKSSEDTQKISVKNEKGSNSQVVEAVTSDIKESKDNNTPAEAMEVDPVPP 550 (621)
Q Consensus 471 s~~~~~~~~~w~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (621)
.+-+.|.+.+--..+.....|. +.+ ..+..+. . +....+++.-.... +....++-|...
T Consensus 286 vG~Deg~i~v~lgreeP~vsMd------~~g------KIiwa~~-~-------ei~~~~~ks~~~~~-ev~DgErL~Lsv 344 (794)
T KOG0276|consen 286 VGFDEGSVTVKLGREEPAVSMD------SNG------KIIWAVH-S-------EIQAVNLKSVGAQK-EVTDGERLPLSV 344 (794)
T ss_pred EeccCCcEEEEccCCCCceeec------CCc------cEEEEcC-c-------eeeeeeceeccCcc-cccCCccccchh
Confidence 6655555544333333222222 111 1111110 0 01111111111111 233344445566
Q ss_pred CCCCCCCCCCCCCCCCCCC
Q psy15549 551 ETNAECPSTPKTHGGTPNK 569 (621)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~ 569 (621)
.+.+.+.-.|+.+.++||.
T Consensus 345 KeLgs~eiyPq~L~hsPNG 363 (794)
T KOG0276|consen 345 KELGSVEIYPQTLAHSPNG 363 (794)
T ss_pred hhccccccchHHhccCCCC
Confidence 7788888999999999885
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-31 Score=261.60 Aligned_cols=335 Identities=20% Similarity=0.324 Sum_probs=262.6
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
...|.+||..++|+|+++ ++++|+.|..|+ +|+.....+... +.||-+-|..+.
T Consensus 47 FdeHdGpVRgv~FH~~qp-----lFVSGGDDykIk--------------VWnYk~rrclft-------L~GHlDYVRt~~ 100 (1202)
T KOG0292|consen 47 FDEHDGPVRGVDFHPTQP-----LFVSGGDDYKIK--------------VWNYKTRRCLFT-------LLGHLDYVRTVF 100 (1202)
T ss_pred hhccCCccceeeecCCCC-----eEEecCCccEEE--------------EEecccceehhh-------hccccceeEEee
Confidence 456999999999999999 999999999999 999998887655 999999999999
Q ss_pred EccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 89 FSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 89 ~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
|++.-.+|++++ |.+|+||+.... .++..+.||...|.|.+|+|...+++++|.|.+|||||+..-+....-
T Consensus 101 FHheyPWIlSASDDQTIrIWNwqsr-------~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~ 173 (1202)
T KOG0292|consen 101 FHHEYPWILSASDDQTIRIWNWQSR-------KCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKA 173 (1202)
T ss_pred ccCCCceEEEccCCCeEEEEeccCC-------ceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCC
Confidence 999999999999 778999999988 889999999999999999999999999999999999998765543332
Q ss_pred CC--------CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEeccCCcce
Q psy15549 168 PS--------SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK--NLGILTEHKKFV 237 (621)
Q Consensus 168 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v 237 (621)
+. .......+......+...+.||...|+.++|+|.-.++++|+.|..|++|.+...+ .+.+.++|...|
T Consensus 174 pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnV 253 (1202)
T KOG0292|consen 174 PGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNV 253 (1202)
T ss_pred CCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCc
Confidence 22 11112233334556778899999999999999999999999999999999986543 355678999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
.++-|+|..+.+++.+.|++|++||+...+.++++... ......++-+|..++++++
T Consensus 254 ssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrre-----------------------ndRFW~laahP~lNLfAAg 310 (1202)
T KOG0292|consen 254 SSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRE-----------------------NDRFWILAAHPELNLFAAG 310 (1202)
T ss_pred ceEEecCccceeEecCCCccEEEEecccccceeeeecc-----------------------CCeEEEEEecCCcceeeee
Confidence 99999999999999999999999999999888887533 2335789999999999887
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEe
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYD 397 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 397 (621)
. |+.+.++.+... .| ++...++.++-.- |..|+.+|
T Consensus 311 H------DsGm~VFkleRE-------rp------------------------------a~~v~~n~LfYvk-d~~i~~~d 346 (1202)
T KOG0292|consen 311 H------DSGMIVFKLERE-------RP------------------------------AYAVNGNGLFYVK-DRFIRSYD 346 (1202)
T ss_pred c------CCceEEEEEccc-------Cc------------------------------eEEEcCCEEEEEc-cceEEeee
Confidence 5 666666655421 11 1111233344333 88999999
Q ss_pred CCCCceeEEEeccc----ccceEEEEEcCCCCeEEEE-e-CCCcEEEEEecC
Q psy15549 398 TQHASPFAFIANIH----YTKLTDITWSSDGKVLIAS-S-TDGYCSIISFGD 443 (621)
Q Consensus 398 ~~~~~~~~~~~~~h----~~~v~~~~~spdg~~l~s~-s-~dg~i~iw~~~~ 443 (621)
+.+.+......--+ ..++.+|.++|....+..+ . ..|..-++.+..
T Consensus 347 ~~t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlics~~~n~~y~L~~ipk 398 (1202)
T KOG0292|consen 347 LRTQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLICSNLDNGEYELVQIPK 398 (1202)
T ss_pred ccccccceeEeccCCCcccCCcceeeeccccCeEEEEeccCCCeEEEEEecC
Confidence 98865433332212 2578899999976644444 3 345555555543
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=265.39 Aligned_cols=314 Identities=18% Similarity=0.261 Sum_probs=260.9
Q ss_pred ccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEE
Q psy15549 76 DLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154 (621)
Q Consensus 76 ~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~ 154 (621)
.+...+..|..++|+|...+++++- .+.|++||..-+ .++..+..|.++|..++|+|.+.+|++|+.|-.|+
T Consensus 4 kfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~-------tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIk 76 (1202)
T KOG0292|consen 4 KFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMG-------TLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIK 76 (1202)
T ss_pred hhhcccccccceecCCCCCEEEEeecCceeeeehhhhh-------hHHhhhhccCCccceeeecCCCCeEEecCCccEEE
Confidence 3556678899999999999999987 888999999988 88999999999999999999999999999999999
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCC
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHK 234 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 234 (621)
||+..+.+++ ..+.+|-..|+.+.|++.-.+++++|.|.+|+||+..+++++..+.+|.
T Consensus 77 VWnYk~rrcl---------------------ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHn 135 (1202)
T KOG0292|consen 77 VWNYKTRRCL---------------------FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHN 135 (1202)
T ss_pred EEecccceeh---------------------hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCc
Confidence 9999999976 5568999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCC----CCCCCcccccc--ccccccccCCcccceeeeeec
Q psy15549 235 KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSK----LPVDSSHELFD--KVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~s 308 (621)
..|+|..|+|....++++|-|.+||+||+...+....-...- ........++. ..+--+..+.|...|+-++|+
T Consensus 136 HYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfh 215 (1202)
T KOG0292|consen 136 HYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFH 215 (1202)
T ss_pred eEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEec
Confidence 999999999999999999999999999996543322111100 00000111221 223334567888899999999
Q ss_pred CCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE
Q psy15549 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA 388 (621)
Q Consensus 309 pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (621)
|.-..+++++ .|..+++|.+.... .-.+....+|...+.++-|+| ....+++.+
T Consensus 216 pTlpliVSG~-----DDRqVKlWrmnetK-----aWEvDtcrgH~nnVssvlfhp----------------~q~lIlSns 269 (1202)
T KOG0292|consen 216 PTLPLIVSGA-----DDRQVKLWRMNETK-----AWEVDTCRGHYNNVSSVLFHP----------------HQDLILSNS 269 (1202)
T ss_pred CCcceEEecC-----CcceeeEEEecccc-----ceeehhhhcccCCcceEEecC----------------ccceeEecC
Confidence 9999999999 89999999876322 123446678888899988888 568899999
Q ss_pred cCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 389 TENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 389 ~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
+|+.|++||+...+.+.++.. ....-+.++-+|..++++.| .|+-+.+|.++...
T Consensus 270 EDksirVwDm~kRt~v~tfrr-endRFW~laahP~lNLfAAg-HDsGm~VFkleREr 324 (1202)
T KOG0292|consen 270 EDKSIRVWDMTKRTSVQTFRR-ENDRFWILAAHPELNLFAAG-HDSGMIVFKLERER 324 (1202)
T ss_pred CCccEEEEecccccceeeeec-cCCeEEEEEecCCcceeeee-cCCceEEEEEcccC
Confidence 999999999999999999865 45688999999999877766 66667788887443
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-31 Score=237.95 Aligned_cols=311 Identities=23% Similarity=0.356 Sum_probs=237.0
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
|+--..|.++|.++... ++ .+++|+.||.++ |||...... ..+.+|.++|.
T Consensus 98 pl~~~~hdDWVSsv~~~--~~-----~IltgsYDg~~r--------------iWd~~Gk~~--------~~~~Ght~~ik 148 (423)
T KOG0313|consen 98 PLQCFLHDDWVSSVKGA--SK-----WILTGSYDGTSR--------------IWDLKGKSI--------KTIVGHTGPIK 148 (423)
T ss_pred ccccccchhhhhhhccc--Cc-----eEEEeecCCeeE--------------EEecCCceE--------EEEecCCccee
Confidence 33455689999999998 44 999999999999 999875432 34789999999
Q ss_pred EEEEccCC---CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 86 VVRFSPNG---ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 86 ~l~~spdg---~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
+++|.-.. ..+++++ |..+++|.++.+... ........||...|-++...++|..+++|+.|.+|.||+..+.
T Consensus 149 ~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~---~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~ 225 (423)
T KOG0313|consen 149 SVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENK---VKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETD 225 (423)
T ss_pred eeEEEecCCccceEEEecCCceEEEEEecCchhh---hhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCC
Confidence 98885432 3477777 999999999887542 2334445699999999999999999999999999999993322
Q ss_pred CCCCCCCCCCc-----ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcc
Q psy15549 162 QDLPEFPSSNL-----DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF 236 (621)
Q Consensus 162 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 236 (621)
. ...+..... ...........+...+.+|..+|.++.|++ ...+++++.|.+|+.||+.++..+.++.. ...
T Consensus 226 ~-~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ks 302 (423)
T KOG0313|consen 226 E-EDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKS 302 (423)
T ss_pred c-cccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec-Ccc
Confidence 1 111110000 001111123335677899999999999997 67899999999999999999999888864 566
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
+.++.++|..++|++|+.|..|++||.+++.-. ........|+.+|.++.|+|...++
T Consensus 303 l~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs--------------------~v~~s~~gH~nwVssvkwsp~~~~~-- 360 (423)
T KOG0313|consen 303 LNCISYSPLSKLLASGSSDRHIRLWDPRTGDGS--------------------VVSQSLIGHKNWVSSVKWSPTNEFQ-- 360 (423)
T ss_pred eeEeecccccceeeecCCCCceeecCCCCCCCc--------------------eeEEeeecchhhhhheecCCCCceE--
Confidence 899999999999999999999999999875311 1111223445566666666655443
Q ss_pred ccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEE
Q psy15549 317 PSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLY 396 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw 396 (621)
|++++.|+++++|
T Consensus 361 -------------------------------------------------------------------~~S~S~D~t~klW 373 (423)
T KOG0313|consen 361 -------------------------------------------------------------------LVSGSYDNTVKLW 373 (423)
T ss_pred -------------------------------------------------------------------EEEEecCCeEEEE
Confidence 5566789999999
Q ss_pred eCCCCc-eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 397 DTQHAS-PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 397 d~~~~~-~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
|+++.+ ++..+ .+|...|.++.|+ ++.+|++|+.|.+|+|+...
T Consensus 374 DvRS~k~plydI-~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 374 DVRSTKAPLYDI-AGHNDKVLSVDWN-EGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred EeccCCCcceee-ccCCceEEEEecc-CCceEEeccCcceEEEeccc
Confidence 999988 88888 4699999999997 45689999999999999754
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=257.40 Aligned_cols=291 Identities=20% Similarity=0.255 Sum_probs=238.8
Q ss_pred eecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccC-CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEE
Q psy15549 120 EFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKT-DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYD 197 (621)
Q Consensus 120 ~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 197 (621)
..+..+.+|+..|.++.|.| .+.+|++++.|+.|+||++.. +.++ +.+.+|..+|..
T Consensus 205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~l---------------------rtf~gH~k~Vrd 263 (503)
T KOG0282|consen 205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCL---------------------RTFKGHRKPVRD 263 (503)
T ss_pred hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCccee---------------------hhhhcchhhhhh
Confidence 45677899999999999999 899999999999999999987 4443 667899999999
Q ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCC-CEEEEEeCCCcEEEEEccCceeeeecccCC
Q psy15549 198 ISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSKKVISRACRSK 276 (621)
Q Consensus 198 i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 276 (621)
++|+.+|..+++++.|+.|++||+++|+++..+. ....+.|+.|+|++ +.|++|+.|+.|+.||+++++.++.+..
T Consensus 264 ~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~-- 340 (503)
T KOG0282|consen 264 ASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDR-- 340 (503)
T ss_pred hhccccCCeeeeeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHh--
Confidence 9999999999999999999999999999999985 34568899999998 8899999999999999999998877753
Q ss_pred CCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccce
Q psy15549 277 LPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYS 356 (621)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (621)
+-+.|..+.|-++|+++++++ .|+++++|+.......... ........
T Consensus 341 ---------------------hLg~i~~i~F~~~g~rFissS-----Ddks~riWe~~~~v~ik~i------~~~~~hsm 388 (503)
T KOG0282|consen 341 ---------------------HLGAILDITFVDEGRRFISSS-----DDKSVRIWENRIPVPIKNI------ADPEMHTM 388 (503)
T ss_pred ---------------------hhhheeeeEEccCCceEeeec-----cCccEEEEEcCCCccchhh------cchhhccC
Confidence 345678999999999999999 8999999987632211110 11111122
Q ss_pred eeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE--EEecccc--cceEEEEEcCCCCeEEEEeC
Q psy15549 357 VAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA--FIANIHY--TKLTDITWSSDGKVLIASST 432 (621)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~h~--~~v~~~~~spdg~~l~s~s~ 432 (621)
.++...| .++++++-+.|+.|.+|.+...-.+. ....+|. +.-..+.|||||++|++|+.
T Consensus 389 P~~~~~P----------------~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGds 452 (503)
T KOG0282|consen 389 PCLTLHP----------------NGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDS 452 (503)
T ss_pred cceecCC----------------CCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecC
Confidence 2333333 67889999999999999965532221 1223554 34667899999999999999
Q ss_pred CCcEEEEEecCCcCCcccCCCCCcccccCCCCCCC-CcccCCCcccHHHhc
Q psy15549 433 DGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGE-PVRSEDKPRSAEQAK 482 (621)
Q Consensus 433 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~w~ 482 (621)
||.+.+||..+-.++..+..|......+.++|-.. .+++++.+|.|++|+
T Consensus 453 dG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 453 DGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred CccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 99999999999999999999998998898888665 788999999999995
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=238.85 Aligned_cols=293 Identities=20% Similarity=0.264 Sum_probs=239.0
Q ss_pred cccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccc-cccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy15549 79 RHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESG-IANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVW 156 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~-~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vw 156 (621)
+....+-|..|||||+||++|+ |+.|.+|+...+.-. ...++....+.-+..+|.|+.|+.|...||+|+.||.|++|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW 290 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW 290 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence 4566789999999999999999 999999999887321 11122233345578899999999999999999999999999
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcc
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF 236 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 236 (621)
.+.++.+++.| -..|...|+|+.|+.|+..+++++.|.++++.-+.+|++++.+++|...
T Consensus 291 ri~tG~ClRrF--------------------drAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSy 350 (508)
T KOG0275|consen 291 RIETGQCLRRF--------------------DRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSY 350 (508)
T ss_pred EEecchHHHHh--------------------hhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCcccc
Confidence 99999998554 3489999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
|....|.++|.++++++.||+|++|+..+.+++.++.... ....|.++..-|.+.
T Consensus 351 vn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~---------------------~d~~vnsv~~~PKnp---- 405 (508)
T KOG0275|consen 351 VNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLG---------------------TDYPVNSVILLPKNP---- 405 (508)
T ss_pred ccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCC---------------------CcccceeEEEcCCCC----
Confidence 9999999999999999999999999999999888775322 112234444443321
Q ss_pred ccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEE
Q psy15549 317 PSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLY 396 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw 396 (621)
..++++...++|+|.
T Consensus 406 -----------------------------------------------------------------eh~iVCNrsntv~im 420 (508)
T KOG0275|consen 406 -----------------------------------------------------------------EHFIVCNRSNTVYIM 420 (508)
T ss_pred -----------------------------------------------------------------ceEEEEcCCCeEEEE
Confidence 223334445566666
Q ss_pred eCCCCceeEEEecc--cccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCC
Q psy15549 397 DTQHASPFAFIANI--HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDK 474 (621)
Q Consensus 397 d~~~~~~~~~~~~~--h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 474 (621)
++. |+.++.+..+ ..+...+.+.||.|.++.+.+.|+.++.|.+.+|.+.+.+.-|...+..+..+|--..+++-+.
T Consensus 421 n~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsE 499 (508)
T KOG0275|consen 421 NMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSE 499 (508)
T ss_pred ecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcc
Confidence 554 3334444322 2345667889999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHhc
Q psy15549 475 PRSAEQAK 482 (621)
Q Consensus 475 ~~~~~~w~ 482 (621)
|+.+++|+
T Consensus 500 DgllKLWk 507 (508)
T KOG0275|consen 500 DGLLKLWK 507 (508)
T ss_pred cchhhhcC
Confidence 99999996
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-30 Score=221.21 Aligned_cols=285 Identities=19% Similarity=0.287 Sum_probs=235.4
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
...|...|.+|+|+.+|. .|++|+.|+.+. +|++....... .....+|.+.|..++
T Consensus 16 ~~~~~~~v~Sv~wn~~g~-----~lasgs~dktv~--------------v~n~e~~r~~~-----~~~~~gh~~svdql~ 71 (313)
T KOG1407|consen 16 LQGHVQKVHSVAWNCDGT-----KLASGSFDKTVS--------------VWNLERDRFRK-----ELVYRGHTDSVDQLC 71 (313)
T ss_pred hhhhhhcceEEEEcccCc-----eeeecccCCceE--------------EEEecchhhhh-----hhcccCCCcchhhhe
Confidence 456788999999999998 999999999999 99888663322 234689999999999
Q ss_pred EccC-CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 89 FSPN-GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 89 ~spd-g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
|+|. ...+++++ |..|++||+..+ ++........+.| .+.|+|+|.+++.++.|..|...|.++.+....
T Consensus 72 w~~~~~d~~atas~dk~ir~wd~r~~-------k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~ 143 (313)
T KOG1407|consen 72 WDPKHPDLFATASGDKTIRIWDIRSG-------KCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTYKIVNE 143 (313)
T ss_pred eCCCCCcceEEecCCceEEEEEeccC-------cEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecccceeeh
Confidence 9984 45666665 899999999987 5555554444444 578999999999999999999999988875432
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCC
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKN 246 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~ 246 (621)
. .....+.-++|+-++.+++.....|.|.|......+++..+++|.....|+.|+|+|
T Consensus 144 ~----------------------~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~G 201 (313)
T KOG1407|consen 144 E----------------------QFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDG 201 (313)
T ss_pred h----------------------cccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCC
Confidence 2 344567788999777777777778999999999999999999999999999999999
Q ss_pred CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCC
Q psy15549 247 QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDS 326 (621)
Q Consensus 247 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~ 326 (621)
++||+|+.|..+.+||+...-+++.+..... +|+.+.||.||++||+++
T Consensus 202 ryfA~GsADAlvSLWD~~ELiC~R~isRldw-----------------------pVRTlSFS~dg~~lASaS-------- 250 (313)
T KOG1407|consen 202 RYFATGSADALVSLWDVDELICERCISRLDW-----------------------PVRTLSFSHDGRMLASAS-------- 250 (313)
T ss_pred ceEeeccccceeeccChhHhhhheeeccccC-----------------------ceEEEEeccCcceeeccC--------
Confidence 9999999999999999998888887765444 458999999999998877
Q ss_pred CCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEE
Q psy15549 327 TRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAF 406 (621)
Q Consensus 327 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 406 (621)
+|..|-|=++.+|..+..
T Consensus 251 --------------------------------------------------------------EDh~IDIA~vetGd~~~e 268 (313)
T KOG1407|consen 251 --------------------------------------------------------------EDHFIDIAEVETGDRVWE 268 (313)
T ss_pred --------------------------------------------------------------ccceEEeEecccCCeEEE
Confidence 567777888888888888
Q ss_pred EecccccceEEEEEcCCCCeEEEEeCC---------CcEEEEEec
Q psy15549 407 IANIHYTKLTDITWSSDGKVLIASSTD---------GYCSIISFG 442 (621)
Q Consensus 407 ~~~~h~~~v~~~~~spdg~~l~s~s~d---------g~i~iw~~~ 442 (621)
+. +.++...++|+|...+||.+++| |.|++|-+.
T Consensus 269 I~--~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~ 311 (313)
T KOG1407|consen 269 IP--CEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLS 311 (313)
T ss_pred ee--ccCCceeEEecCCCceeeEEecCCCCccccccceeEEecCC
Confidence 84 78899999999999999988754 567776554
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=244.16 Aligned_cols=270 Identities=21% Similarity=0.312 Sum_probs=224.2
Q ss_pred ccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy15549 80 HQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~ 158 (621)
....|+|+.+. ...+++|. |++|+|||.... .....+.||++.|.|+.| +.+.|++|+.|.+|+|||+
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~-------~c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv 264 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSL-------ECLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDV 264 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccH-------HHHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEec
Confidence 45679998864 56788888 999999999876 778899999999999999 5569999999999999999
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE---EEEeccCCc
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN---LGILTEHKK 235 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~ 235 (621)
++++++ ..+.+|...|..+.|+ ..++++++.|.++.+||+..... ...+.+|..
T Consensus 265 ~tge~l---------------------~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrA 321 (499)
T KOG0281|consen 265 NTGEPL---------------------NTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 321 (499)
T ss_pred cCCchh---------------------hHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhh
Confidence 999976 5668999999999997 45999999999999999976543 345678999
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
.|..+.|+ .+++++++.|.+|++|++.+++.++++.+|... +|
T Consensus 322 aVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRG-----------------------------------IA 364 (499)
T KOG0281|consen 322 AVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG-----------------------------------IA 364 (499)
T ss_pred heeeeccc--cceEEEecCCceEEEEeccceeeehhhhccccc-----------------------------------ce
Confidence 99999998 669999999999999999999988877654322 11
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
+.- | .++++++|++|.+|++
T Consensus 365 ClQ------------------------------------------Y------------------r~rlvVSGSSDntIRl 384 (499)
T KOG0281|consen 365 CLQ------------------------------------------Y------------------RDRLVVSGSSDNTIRL 384 (499)
T ss_pred ehh------------------------------------------c------------------cCeEEEecCCCceEEE
Confidence 111 1 3467778889999999
Q ss_pred EeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc---------CCcccCCCCCcccccCCCCCC
Q psy15549 396 YDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE---------IGIPYVPPSGEESKENDPTKG 466 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 466 (621)
||+..|.+++.+ .||..-|.++.| |.+.+++|+.||+|++||+..+. ++..+..|++.+..++| |.
T Consensus 385 wdi~~G~cLRvL-eGHEeLvRciRF--d~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~ 459 (499)
T KOG0281|consen 385 WDIECGACLRVL-EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 459 (499)
T ss_pred EeccccHHHHHH-hchHHhhhheee--cCceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cc
Confidence 999999999988 579999999999 67789999999999999999764 34455667777777776 45
Q ss_pred CCcccCCCcccHHHhcccC
Q psy15549 467 EPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 467 ~~~~s~~~~~~~~~w~~~~ 485 (621)
..+++.+.+.+|.+|+...
T Consensus 460 fqIvsssHddtILiWdFl~ 478 (499)
T KOG0281|consen 460 FQIISSSHDDTILIWDFLN 478 (499)
T ss_pred eEEEeccCCCeEEEEEcCC
Confidence 5788899999999998443
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-32 Score=233.70 Aligned_cols=285 Identities=17% Similarity=0.222 Sum_probs=251.1
Q ss_pred ccccccCcEEEEEEcc---CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC
Q psy15549 76 DLSRHQKAVNVVRFSP---NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES 151 (621)
Q Consensus 76 ~~~~h~~~V~~l~~sp---dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg 151 (621)
+..+|+.+|..++||| +|-+|++++ |+.-.+-+-+++ ..+-++.+|.+.|+...++.+...-|+++.|-
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tg-------dwigtfeghkgavw~~~l~~na~~aasaaadf 81 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTG-------DWIGTFEGHKGAVWSATLNKNATRAASAAADF 81 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCC-------CcEEeeeccCcceeeeecCchhhhhhhhcccc
Confidence 3679999999999986 899999998 777777766666 66888999999999999999888899999999
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EEEEe
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK-NLGIL 230 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~-~~~~~ 230 (621)
+-+|||.-++..+..| .|..-|.+++|+.|.++|++|+.+..++|||++..+ +...+
T Consensus 82 takvw~a~tgdelhsf----------------------~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~ 139 (334)
T KOG0278|consen 82 TAKVWDAVTGDELHSF----------------------EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEI 139 (334)
T ss_pred hhhhhhhhhhhhhhhh----------------------hhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhh
Confidence 9999999999877555 688889999999999999999999999999998653 56778
Q ss_pred ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 231 TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 231 ~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
.+|.+.|..+.|....+.+++.+.|++||+||.+++..++.+. .+..++++.++++
T Consensus 140 ~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~------------------------~~s~VtSlEvs~d 195 (334)
T KOG0278|consen 140 SGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE------------------------FNSPVTSLEVSQD 195 (334)
T ss_pred cCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe------------------------cCCCCcceeeccC
Confidence 8999999999999988999999999999999999999988874 3456789999999
Q ss_pred CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 311 g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
|++|.++. .
T Consensus 196 G~ilTia~-----------------------------------------------------------------------g 204 (334)
T KOG0278|consen 196 GRILTIAY-----------------------------------------------------------------------G 204 (334)
T ss_pred CCEEEEec-----------------------------------------------------------------------C
Confidence 99887644 3
Q ss_pred CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCccc-CCCCCcccccCCCCCCCCc
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY-VPPSGEESKENDPTKGEPV 469 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 469 (621)
+.|.+||..+-.++.... -...|.+...+|+...+++|+.|+.++.||+.+|+-+..+ .+|-+.+.++.|+|+|+..
T Consensus 205 ssV~Fwdaksf~~lKs~k--~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~y 282 (334)
T KOG0278|consen 205 SSVKFWDAKSFGLLKSYK--MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELY 282 (334)
T ss_pred ceeEEeccccccceeecc--CccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCcee
Confidence 678899998888887774 3467999999999999999999999999999999888875 8899999999999999999
Q ss_pred ccCCCcccHHHhcccCc
Q psy15549 470 RSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 470 ~s~~~~~~~~~w~~~~~ 486 (621)
++++.||++++|.....
T Consensus 283 AsGSEDGTirlWQt~~~ 299 (334)
T KOG0278|consen 283 ASGSEDGTIRLWQTTPG 299 (334)
T ss_pred eccCCCceEEEEEecCC
Confidence 99999999999985433
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-30 Score=284.69 Aligned_cols=290 Identities=16% Similarity=0.202 Sum_probs=222.0
Q ss_pred ccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccc-eecccccccCCCeEEEEECC-CCCEEEEEeCCCc
Q psy15549 76 DLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANV-EFASDLSRHQKAVNVVRFSP-NGELLASGDDEST 152 (621)
Q Consensus 76 ~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~-~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~ 152 (621)
.+..|.+.|.+++|+|+|++||+|+ |+.|+||+........... .....+. +...|.+++|++ ++.+|++++.||+
T Consensus 478 ~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~ 556 (793)
T PLN00181 478 DLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGV 556 (793)
T ss_pred cccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCe
Confidence 3567999999999999999999988 8899999975421100000 1111222 346799999987 5789999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEec
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 231 (621)
|++||+.+++.+ ..+.+|...|++++|+| ++.+|++|+.||.|++||+.++..+..+.
T Consensus 557 v~lWd~~~~~~~---------------------~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~ 615 (793)
T PLN00181 557 VQVWDVARSQLV---------------------TEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 615 (793)
T ss_pred EEEEECCCCeEE---------------------EEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe
Confidence 999999887643 56678999999999997 78999999999999999999999988886
Q ss_pred cCCcceEEEEEc-CCCCEEEEEeCCCcEEEEEccCcee-eeecccCCCCCCCccccccccccccccCCcccceeeeeecC
Q psy15549 232 EHKKFVQGVAWD-PKNQYVATLSSDRSLRTYSIQSKKV-ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309 (621)
Q Consensus 232 ~~~~~v~~l~~s-p~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 309 (621)
.+ ..+.++.|+ +++.+|++|+.||.|++||++.... +..+. .+...|.++.|.
T Consensus 616 ~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~-----------------------~h~~~V~~v~f~- 670 (793)
T PLN00181 616 TK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMI-----------------------GHSKTVSYVRFV- 670 (793)
T ss_pred cC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEec-----------------------CCCCCEEEEEEe-
Confidence 54 678999995 5789999999999999999976542 22221 233445666664
Q ss_pred CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc
Q psy15549 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT 389 (621)
Q Consensus 310 dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (621)
++.+ +++++.
T Consensus 671 ~~~~----------------------------------------------------------------------lvs~s~ 680 (793)
T PLN00181 671 DSST----------------------------------------------------------------------LVSSST 680 (793)
T ss_pred CCCE----------------------------------------------------------------------EEEEEC
Confidence 3333 455557
Q ss_pred CCcEEEEeCCCC------ceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCc-------------cc
Q psy15549 390 ENNILLYDTQHA------SPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGI-------------PY 450 (621)
Q Consensus 390 dg~i~iwd~~~~------~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~-------------~~ 450 (621)
|+.|++||+..+ .++..+ .+|...+..++|+|++.+|++|+.||.|++|+........ ..
T Consensus 681 D~~ikiWd~~~~~~~~~~~~l~~~-~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~ 759 (793)
T PLN00181 681 DNTLKLWDLSMSISGINETPLHSF-MGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEV 759 (793)
T ss_pred CCEEEEEeCCCCccccCCcceEEE-cCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCccccccc
Confidence 777888887642 445555 4699999999999999999999999999999976542211 11
Q ss_pred CCCCCcccccCCCCCCCCcccCCCcccHHHhcc
Q psy15549 451 VPPSGEESKENDPTKGEPVRSEDKPRSAEQAKG 483 (621)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~ 483 (621)
..+...+..+.|++++..+++++.+|.|++|++
T Consensus 760 ~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 760 DDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred CCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 223445778889999999999999999999974
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.8e-31 Score=245.32 Aligned_cols=310 Identities=15% Similarity=0.235 Sum_probs=227.7
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
+-||...|.++++.|.|. +|++|+.|..|+ +||+.........+..+ .......|++++
T Consensus 163 l~hgtk~Vsal~~Dp~Ga-----R~~sGs~Dy~v~--------------~wDf~gMdas~~~fr~l--~P~E~h~i~sl~ 221 (641)
T KOG0772|consen 163 LKHGTKIVSALAVDPSGA-----RFVSGSLDYTVK--------------FWDFQGMDASMRSFRQL--QPCETHQINSLQ 221 (641)
T ss_pred ccCCceEEEEeeecCCCc-----eeeeccccceEE--------------EEecccccccchhhhcc--Ccccccccceee
Confidence 345677899999999998 999999999999 88877655433322222 223455799999
Q ss_pred EccCCCEEEEEc-CCceEEEEeccCccc-----cccceecccccccCCCeEEEEECCCC-CEEEEEeCCCcEEEEEccCC
Q psy15549 89 FSPNGELLASGD-DVGKEIWYLTERESG-----IANVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 89 ~spdg~~las~~-d~~v~iw~~~~~~~~-----~~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg~i~vwd~~~~ 161 (621)
|++.|..|++.+ ....+|+|-...... -.-..-+..-.||...++|.+|+|.. ..|++|+.||++|+||+...
T Consensus 222 ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~ 301 (641)
T KOG0772|consen 222 YSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNT 301 (641)
T ss_pred ecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCc
Confidence 999988776655 666788876543210 00011233457899999999999954 58899999999999999876
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE---EEEeccCCc--c
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN---LGILTEHKK--F 236 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~--~ 236 (621)
+....+ ...+...+..-.++.++|+|||++||+|+.||.|.+|+...... ...-.+|.. .
T Consensus 302 k~q~qV---------------ik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~ 366 (641)
T KOG0772|consen 302 KSQLQV---------------IKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQD 366 (641)
T ss_pred hhheeE---------------EeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCc
Confidence 532111 00112234556789999999999999999999999999754322 223356776 8
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCce-eeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKK-VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
|+|+.||++|++|++-+.|+++++||++..+ .+.....-.. .-.-+.++|||+.++|+
T Consensus 367 Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t---------------------~~~~tdc~FSPd~kli~ 425 (641)
T KOG0772|consen 367 ITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPT---------------------PFPGTDCCFSPDDKLIL 425 (641)
T ss_pred eeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCc---------------------cCCCCccccCCCceEEE
Confidence 9999999999999999999999999998754 3332221111 11236799999999999
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
+++.. .-+...|.+++
T Consensus 426 TGtS~----------------------------------------------------------------~~~~~~g~L~f 441 (641)
T KOG0772|consen 426 TGTSA----------------------------------------------------------------PNGMTAGTLFF 441 (641)
T ss_pred ecccc----------------------------------------------------------------cCCCCCceEEE
Confidence 88721 00124568999
Q ss_pred EeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 396 YDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
||..+-..++.+. .....|..+.|+|.-+.|+.|+.||++++|=
T Consensus 442 ~d~~t~d~v~ki~-i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 442 FDRMTLDTVYKID-ISTASVVRCLWHPKLNQIFAGSGDGTAHVYY 485 (641)
T ss_pred EeccceeeEEEec-CCCceEEEEeecchhhheeeecCCCceEEEE
Confidence 9999988888885 3577899999999988899999999999874
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-30 Score=250.00 Aligned_cols=276 Identities=24% Similarity=0.383 Sum_probs=233.3
Q ss_pred EeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEE
Q psy15549 19 VDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS 98 (621)
Q Consensus 19 l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las 98 (621)
++|+..+ .||+|... .|. +|+..++..... ...+...|+++.|+++|.+||+
T Consensus 183 ldWss~n------~laValg~-~vy--------------lW~~~s~~v~~l-------~~~~~~~vtSv~ws~~G~~Lav 234 (484)
T KOG0305|consen 183 LDWSSAN------VLAVALGQ-SVY--------------LWSASSGSVTEL-------CSFGEELVTSVKWSPDGSHLAV 234 (484)
T ss_pred hhcccCC------eEEEEecc-eEE--------------EEecCCCceEEe-------EecCCCceEEEEECCCCCEEEE
Confidence 5666544 67776643 455 898887763222 2333789999999999999999
Q ss_pred Ec-CCceEEEEeccCccccccceecccccc-cCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCccccc
Q psy15549 99 GD-DVGKEIWYLTERESGIANVEFASDLSR-HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEEN 176 (621)
Q Consensus 99 ~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 176 (621)
|. ++.|.|||.... ..+..+.+ |...|-+++|. +..+.+|+.|+.|..+|++..+...
T Consensus 235 G~~~g~v~iwD~~~~-------k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~----------- 294 (484)
T KOG0305|consen 235 GTSDGTVQIWDVKEQ-------KKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVV----------- 294 (484)
T ss_pred eecCCeEEEEehhhc-------cccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhh-----------
Confidence 98 888999999876 55677777 99999999997 6689999999999999999887641
Q ss_pred ccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC-CCEEEEEe--
Q psy15549 177 VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK-NQYVATLS-- 253 (621)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~-~~~l~s~~-- 253 (621)
..+.+|...|..+.|++|+++||+|+.|+.+.|||.....++..+..|.+.|.+++|+|- ...||+|+
T Consensus 295 ---------~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs 365 (484)
T KOG0305|consen 295 ---------STLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGS 365 (484)
T ss_pred ---------hhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCC
Confidence 246789999999999999999999999999999999888899999999999999999994 56788765
Q ss_pred CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceee
Q psy15549 254 SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISV 333 (621)
Q Consensus 254 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~ 333 (621)
.|+.|++||..++..+..+. ..+.|.++.|++..+-|+++.|
T Consensus 366 ~D~~i~fwn~~~g~~i~~vd------------------------tgsQVcsL~Wsk~~kEi~sthG-------------- 407 (484)
T KOG0305|consen 366 ADRCIKFWNTNTGARIDSVD------------------------TGSQVCSLIWSKKYKELLSTHG-------------- 407 (484)
T ss_pred cccEEEEEEcCCCcEecccc------------------------cCCceeeEEEcCCCCEEEEecC--------------
Confidence 49999999999998887663 2456899999999988887663
Q ss_pred eeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEeccccc
Q psy15549 334 THVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYT 413 (621)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~ 413 (621)
..++.|.||+..+.+.+..+ .+|..
T Consensus 408 ------------------------------------------------------~s~n~i~lw~~ps~~~~~~l-~gH~~ 432 (484)
T KOG0305|consen 408 ------------------------------------------------------YSENQITLWKYPSMKLVAEL-LGHTS 432 (484)
T ss_pred ------------------------------------------------------CCCCcEEEEeccccceeeee-cCCcc
Confidence 24568999999998888888 57999
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 414 KLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 414 ~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
.|..+++||||..+++|+.|.++++|++-+.
T Consensus 433 RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 433 RVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred eeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 9999999999999999999999999998865
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=240.30 Aligned_cols=288 Identities=17% Similarity=0.313 Sum_probs=235.5
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
.+..|.+.|..+.|-++.. .|++|+.|..|. +|++...+ .++..++.+-.+.|+++
T Consensus 170 ~ld~h~gev~~v~~l~~sd-----tlatgg~Dr~Ik--------------~W~v~~~k-----~~~~~tLaGs~g~it~~ 225 (459)
T KOG0288|consen 170 VLDAHEGEVHDVEFLRNSD-----TLATGGSDRIIK--------------LWNVLGEK-----SELISTLAGSLGNITSI 225 (459)
T ss_pred hhhccccccceeEEccCcc-----hhhhcchhhhhh--------------hhhcccch-----hhhhhhhhccCCCccee
Confidence 4556899999999999976 999999999999 99887664 23456788888999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
.|.++++.+++++ |+.+++|++... ....++.+|++.|+++.|......+++|+.|.+|++||+....+..+
T Consensus 226 d~d~~~~~~iAas~d~~~r~Wnvd~~-------r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt 298 (459)
T KOG0288|consen 226 DFDSDNKHVIAASNDKNLRLWNVDSL-------RLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKT 298 (459)
T ss_pred eecCCCceEEeecCCCceeeeeccch-------hhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecc
Confidence 9999998877776 888999999977 78899999999999999988766799999999999999999877643
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCC
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKN 246 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~ 246 (621)
+ -....+..|..+ ...+++|..|+.|++||+++..+......+. .|+++..++++
T Consensus 299 ~----------------------l~~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g 353 (459)
T KOG0288|consen 299 V----------------------LPGSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDG 353 (459)
T ss_pred c----------------------cccccccceEec--ceeeeecccccceEEEeccCCceeeEeecCc-ceeeEeeccCC
Confidence 3 122344555554 4568889999999999999999998887655 89999999999
Q ss_pred CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCC
Q psy15549 247 QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDS 326 (621)
Q Consensus 247 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~ 326 (621)
..|++++.|.++.+.|+++......+....... .+-.+.+.|||++.|+++
T Consensus 354 ~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~-------------------asDwtrvvfSpd~~YvaA---------- 404 (459)
T KOG0288|consen 354 LELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKC-------------------ASDWTRVVFSPDGSYVAA---------- 404 (459)
T ss_pred eEEeeecCCCceeeeecccccEEEEeecccccc-------------------ccccceeEECCCCceeee----------
Confidence 999999999999999999987766553221111 111345555555555554
Q ss_pred CCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEE
Q psy15549 327 TRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAF 406 (621)
Q Consensus 327 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 406 (621)
|+.||.|+||++.++++...
T Consensus 405 ------------------------------------------------------------GS~dgsv~iW~v~tgKlE~~ 424 (459)
T KOG0288|consen 405 ------------------------------------------------------------GSADGSVYIWSVFTGKLEKV 424 (459)
T ss_pred ------------------------------------------------------------ccCCCcEEEEEccCceEEEE
Confidence 55889999999999998888
Q ss_pred Eeccccc-ceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 407 IANIHYT-KLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 407 ~~~~h~~-~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
+...+.. .|++++|+|.|..|++++.++.+.+|.
T Consensus 425 l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 425 LSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred eccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 8665555 799999999999999999999999993
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=258.40 Aligned_cols=308 Identities=17% Similarity=0.253 Sum_probs=210.9
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccccccee----eccccccccC
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVE----FASDLSRHQK 82 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~----~~~~~~~h~~ 82 (621)
++...|++.|++|.||+||+ |||+|+.||.|+ ||.+...+....... ....+.. .+
T Consensus 261 e~~~ah~gaIw~mKFS~DGK-----yLAsaGeD~vir--------------VWkVie~e~~~~~~~~~~~~~~~~~~-~s 320 (712)
T KOG0283|consen 261 EISNAHKGAIWAMKFSHDGK-----YLASAGEDGVIR--------------VWKVIESERMRVAEGDSSCMYFEYNA-NS 320 (712)
T ss_pred ccccccCCcEEEEEeCCCCc-----eeeecCCCceEE--------------EEEEeccchhcccccccchhhhhhhh-cc
Confidence 44558999999999999999 999999999999 666654222100000 0000000 00
Q ss_pred cEEEEEEcc---CCCEEE--EEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy15549 83 AVNVVRFSP---NGELLA--SGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVW 156 (621)
Q Consensus 83 ~V~~l~~sp---dg~~la--s~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vw 156 (621)
.+..+.-++ .++... .+. ...+ +...... ...-+++..+.||.+.|..+.||.++ +|++++.|.+||||
T Consensus 321 ~~~p~~s~~~~~~~~~s~~~~~~~s~~~-~~p~~~f---~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLW 395 (712)
T KOG0283|consen 321 QIEPSTSSEEKISSRTSSSRKGSQSPCV-LLPLKAF---VFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLW 395 (712)
T ss_pred ccCccccccccccccccccccccCCccc-cCCCccc---cccccchhhhhccchhheecccccCC-eeEeccccccEEee
Confidence 011111111 111111 111 1111 1111110 01116678899999999999999764 89999999999999
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEeccCCc
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKNLGILTEHKK 235 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 235 (621)
++....++..| .|...|+|++|+| |.++|++|+-||.|+||++...+.+.-.. -..
T Consensus 396 h~~~~~CL~~F----------------------~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D-l~~ 452 (712)
T KOG0283|consen 396 HPGRKECLKVF----------------------SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND-LRD 452 (712)
T ss_pred cCCCcceeeEE----------------------ecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh-hhh
Confidence 99999987555 7999999999999 88999999999999999998776665543 447
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
-|++++|.|||++.++|+.+|.+++|+....+...........- ....+. .|+++.|.|..
T Consensus 453 lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~--------------Kk~~~~-rITG~Q~~p~~---- 513 (712)
T KOG0283|consen 453 LITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNK--------------KKKQGK-RITGLQFFPGD---- 513 (712)
T ss_pred hheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccC--------------ccccCc-eeeeeEecCCC----
Confidence 89999999999999999999999999998877655432111000 000011 23333333221
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
-..+++.+.|..|+|
T Consensus 514 -----------------------------------------------------------------~~~vLVTSnDSrIRI 528 (712)
T KOG0283|consen 514 -----------------------------------------------------------------PDEVLVTSNDSRIRI 528 (712)
T ss_pred -----------------------------------------------------------------CCeEEEecCCCceEE
Confidence 125777788999999
Q ss_pred EeCCCCceeEEEeccccc-ceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcC
Q psy15549 396 YDTQHASPFAFIANIHYT-KLTDITWSSDGKVLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~-~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~ 446 (621)
||..+..++..+...+.. .=....|+.||++|++++.|..|+||+++.-..
T Consensus 529 ~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~~~ 580 (712)
T KOG0283|consen 529 YDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDSFNS 580 (712)
T ss_pred EeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCCCcc
Confidence 999888888877654433 335678999999999999999999999875443
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=220.08 Aligned_cols=285 Identities=19% Similarity=0.309 Sum_probs=213.8
Q ss_pred eEEEeccccccCCcceEEEEec-------CCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGG-------ADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~-------~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
=+++.|||--. ++||.+. ..|.+. |-++...+.... ...+ .-.+.+..++
T Consensus 11 GysvqfSPf~~----nrLavAt~q~yGl~G~G~L~--------------ile~~~~~gi~e----~~s~-d~~D~LfdV~ 67 (311)
T KOG0277|consen 11 GYSVQFSPFVE----NRLAVATAQHYGLAGNGRLF--------------ILEVTDPKGIQE----CQSY-DTEDGLFDVA 67 (311)
T ss_pred cceeEeccccc----chhheeehhhcccccCceEE--------------EEecCCCCCeEE----EEee-ecccceeEee
Confidence 36889999765 3555442 356666 666653332221 1112 2357899999
Q ss_pred EccCC--CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 89 FSPNG--ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 89 ~spdg--~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
|+++. ..+++.+|+.++|||..... .+++.++.|...|.++.|++ ++..+++++-|++|++|+....+.+
T Consensus 68 Wse~~e~~~~~a~GDGSLrl~d~~~~s------~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv- 140 (311)
T KOG0277|consen 68 WSENHENQVIAASGDGSLRLFDLTMPS------KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSV- 140 (311)
T ss_pred ecCCCcceEEEEecCceEEEeccCCCC------cchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcce-
Confidence 99954 34445559999999976554 67888999999999999998 5667888899999999999888765
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp 244 (621)
..+.+|...|+...|+| ..+++++++.|+.+++||++.......+..|...|.++.|+.
T Consensus 141 --------------------~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~k 200 (311)
T KOG0277|consen 141 --------------------QTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSK 200 (311)
T ss_pred --------------------EeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccc
Confidence 56789999999999999 678999999999999999987555555889999999999997
Q ss_pred -CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccC
Q psy15549 245 -KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLEN 323 (621)
Q Consensus 245 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~ 323 (621)
+.+.|+||+.|+.|++||++..+. +++....+.-.|+.++|||...-+
T Consensus 201 y~~~vl~Tg~vd~~vr~wDir~~r~----------------------pl~eL~gh~~AVRkvk~Sph~~~l--------- 249 (311)
T KOG0277|consen 201 YNHNVLATGGVDNLVRGWDIRNLRT----------------------PLFELNGHGLAVRKVKFSPHHASL--------- 249 (311)
T ss_pred cCCcEEEecCCCceEEEEehhhccc----------------------cceeecCCceEEEEEecCcchhhH---------
Confidence 557789999999999999987542 233344556677888888865322
Q ss_pred CCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCce
Q psy15549 324 SDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP 403 (621)
Q Consensus 324 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 403 (621)
|++++.|-+++|||...+..
T Consensus 250 ------------------------------------------------------------LaSasYDmT~riw~~~~~ds 269 (311)
T KOG0277|consen 250 ------------------------------------------------------------LASASYDMTVRIWDPERQDS 269 (311)
T ss_pred ------------------------------------------------------------hhhccccceEEecccccchh
Confidence 23334566677777665443
Q ss_pred eEEEecccccceEEEEEcC-CCCeEEEEeCCCcEEEEEe
Q psy15549 404 FAFIANIHYTKLTDITWSS-DGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 404 ~~~~~~~h~~~v~~~~~sp-dg~~l~s~s~dg~i~iw~~ 441 (621)
.......|..-|..+.||+ ++.++|+++.|+.++||+-
T Consensus 270 ~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 270 AIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred hhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 3333245888899999998 5679999999999999983
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=248.47 Aligned_cols=221 Identities=15% Similarity=0.222 Sum_probs=171.7
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc-
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP- 91 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp- 91 (621)
-..|....+++|+. .+++++.+.....|+......+ +|.-..+..... ...+.+|.+.|.+++|+|
T Consensus 20 ~~~i~~~~~~~d~~-----~~~~~n~~~~a~~w~~~gg~~v----~~~~~~G~~~~~----~~~l~GH~~~V~~v~fsP~ 86 (493)
T PTZ00421 20 FLNVTPSTALWDCS-----NTIACNDRFIAVPWQQLGSTAV----LKHTDYGKLASN----PPILLGQEGPIIDVAFNPF 86 (493)
T ss_pred eeccccccccCCCC-----CcEeECCceEEEEEecCCceEE----eeccccccCCCC----CceEeCCCCCEEEEEEcCC
Confidence 34677777888876 7888888888885554332211 332222221110 124789999999999999
Q ss_pred CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCC-CEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 92 NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 92 dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
++++|++|+ |+.|++|++............+..+.+|...|.+++|+|++ ++|++++.|++|+|||+.++..+
T Consensus 87 d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~----- 161 (493)
T PTZ00421 87 DPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAV----- 161 (493)
T ss_pred CCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEE-----
Confidence 889999988 88999999976532111113456788999999999999975 69999999999999999987643
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcc-eEEEEEcCCCCE
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF-VQGVAWDPKNQY 248 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-v~~l~~sp~~~~ 248 (621)
..+.+|...|.+++|+|++.+|++++.|+.|++||+++++.+..+.+|.+. +..+.|.+++..
T Consensus 162 ----------------~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ 225 (493)
T PTZ00421 162 ----------------EVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDL 225 (493)
T ss_pred ----------------EEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCe
Confidence 556789999999999999999999999999999999999999998888764 456789998888
Q ss_pred EEEEe----CCCcEEEEEccCce
Q psy15549 249 VATLS----SDRSLRTYSIQSKK 267 (621)
Q Consensus 249 l~s~~----~dg~i~iwd~~~~~ 267 (621)
+++++ .|+.|++||+++..
T Consensus 226 ivt~G~s~s~Dr~VklWDlr~~~ 248 (493)
T PTZ00421 226 IITLGCSKSQQRQIMLWDTRKMA 248 (493)
T ss_pred EEEEecCCCCCCeEEEEeCCCCC
Confidence 87654 47899999998643
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-29 Score=250.90 Aligned_cols=287 Identities=22% Similarity=0.371 Sum_probs=242.5
Q ss_pred cCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEc
Q psy15549 11 HNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 90 (621)
Q Consensus 11 ~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 90 (621)
++...+.|..|+ ++ ++++++.+.+|+ +|+..++.... ..+.+|.+.|.+++|.
T Consensus 206 ~~~~~~~~~q~~-~~------~~~~~s~~~tl~--------------~~~~~~~~~i~------~~l~GH~g~V~~l~~~ 258 (537)
T KOG0274|consen 206 TDDHVVLCLQLH-DG------FFKSGSDDSTLH--------------LWDLNNGYLIL------TRLVGHFGGVWGLAFP 258 (537)
T ss_pred cCcchhhhheee-cC------eEEecCCCceeE--------------EeecccceEEE------eeccCCCCCceeEEEe
Confidence 567789999999 44 899999999999 99988765432 2489999999999999
Q ss_pred cCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 91 PNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 91 pdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
.-+.+|++|+ |.++++||..++ .+...+.+|...|.++... ..++++|+.|.+|++|++.++..+
T Consensus 259 ~~~~~lvsgS~D~t~rvWd~~sg-------~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l----- 324 (537)
T KOG0274|consen 259 SGGDKLVSGSTDKTERVWDCSTG-------ECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACL----- 324 (537)
T ss_pred cCCCEEEEEecCCcEEeEecCCC-------cEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceE-----
Confidence 8889999999 999999998888 8889999999999998875 457888999999999999988864
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEE
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYV 249 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 249 (621)
..+.+|...|+++..+ +.++++|+.|+.|++||+.++++++.+.+|...|.++.+.+. .++
T Consensus 325 ----------------~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~ 385 (537)
T KOG0274|consen 325 ----------------NLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRL 385 (537)
T ss_pred ----------------EEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceE
Confidence 6667799999999998 779999999999999999999999999999999999988765 899
Q ss_pred EEEeCCCcEEEEEccCc-eeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCC
Q psy15549 250 ATLSSDRSLRTYSIQSK-KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTR 328 (621)
Q Consensus 250 ~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i 328 (621)
++|+.|++|++||+++. +++..+..+.. .+.+ +.
T Consensus 386 ~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~-----------------------~v~~---------l~------------- 420 (537)
T KOG0274|consen 386 LSGSLDTTIKVWDLRTKRKCIHTLQGHTS-----------------------LVSS---------LL------------- 420 (537)
T ss_pred EeeeeccceEeecCCchhhhhhhhcCCcc-----------------------cccc---------cc-------------
Confidence 99999999999999998 66655543211 0000 00
Q ss_pred cceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEe
Q psy15549 329 KPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIA 408 (621)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 408 (621)
..+.++++++.|+.|++||..+++++..+.
T Consensus 421 --------------------------------------------------~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~ 450 (537)
T KOG0274|consen 421 --------------------------------------------------LRDNFLVSSSADGTIKLWDAEEGECLRTLE 450 (537)
T ss_pred --------------------------------------------------cccceeEeccccccEEEeecccCceeeeec
Confidence 023667788899999999999999999996
Q ss_pred cccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCC
Q psy15549 409 NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 409 ~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
..|...|+.+++. ...+++++.||++++||+.++.+.+.+..+.
T Consensus 451 ~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l~~~~ 494 (537)
T KOG0274|consen 451 GRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTLLSTD 494 (537)
T ss_pred cCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhhhhcc
Confidence 5467889999886 4578889999999999999999988874433
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-28 Score=213.36 Aligned_cols=288 Identities=11% Similarity=0.171 Sum_probs=229.5
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
..-.+.|.+|.|+++|. +|++++.|..++ |||..++..... +..+.-.|..++|
T Consensus 11 ~~~~~~i~sl~fs~~G~-----~litss~dDsl~--------------LYd~~~g~~~~t-------i~skkyG~~~~~F 64 (311)
T KOG1446|consen 11 RETNGKINSLDFSDDGL-----LLITSSEDDSLR--------------LYDSLSGKQVKT-------INSKKYGVDLACF 64 (311)
T ss_pred ccCCCceeEEEecCCCC-----EEEEecCCCeEE--------------EEEcCCCceeeE-------eecccccccEEEE
Confidence 33467899999999999 999999999999 888887766444 6777788999999
Q ss_pred ccCCCEEEEEc---CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 90 SPNGELLASGD---DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 90 spdg~~las~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
......++.++ |..|+..++.+. +.++.+.||...|+.++.+|-+..+++++.|++|++||++..++..
T Consensus 65 th~~~~~i~sStk~d~tIryLsl~dN-------kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg- 136 (311)
T KOG1446|consen 65 THHSNTVIHSSTKEDDTIRYLSLHDN-------KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQG- 136 (311)
T ss_pred ecCCceEEEccCCCCCceEEEEeecC-------ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCce-
Confidence 87666665554 888999999988 8899999999999999999988999999999999999999777642
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC--cEEEEec---cCCcceEEEE
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG--KNLGILT---EHKKFVQGVA 241 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~--~~~~~~~---~~~~~v~~l~ 241 (621)
.+ +...-..++|.|.|-++|++.....|++||++.. .+..++. +.....+.+.
T Consensus 137 --------------------~l--~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~ 194 (311)
T KOG1446|consen 137 --------------------LL--NLSGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLE 194 (311)
T ss_pred --------------------EE--ecCCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeE
Confidence 11 2222346789999999999998889999999864 3344443 3466789999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccc
Q psy15549 242 WDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCL 321 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~ 321 (621)
|+|||++++.++..+.+.+.|.-+|..+..+........ .-.+.+|+||++++++++
T Consensus 195 FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~--------------------~~~~a~ftPds~Fvl~gs--- 251 (311)
T KOG1446|consen 195 FSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGN--------------------LPLSATFTPDSKFVLSGS--- 251 (311)
T ss_pred EcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCC--------------------cceeEEECCCCcEEEEec---
Confidence 999999999999999999999999987776654332110 013566777776666544
Q ss_pred cCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC
Q psy15549 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA 401 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 401 (621)
.||+|.+|+++++
T Consensus 252 -------------------------------------------------------------------~dg~i~vw~~~tg 264 (311)
T KOG1446|consen 252 -------------------------------------------------------------------DDGTIHVWNLETG 264 (311)
T ss_pred -------------------------------------------------------------------CCCcEEEEEcCCC
Confidence 7899999999999
Q ss_pred ceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 402 SPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 402 ~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
..+..+...+..++.++.|+|.-..++++ +..+.+|=....+
T Consensus 265 ~~v~~~~~~~~~~~~~~~fnP~~~mf~sa--~s~l~fw~p~~~~ 306 (311)
T KOG1446|consen 265 KKVAVLRGPNGGPVSCVRFNPRYAMFVSA--SSNLVFWLPDEDA 306 (311)
T ss_pred cEeeEecCCCCCCccccccCCceeeeeec--CceEEEEeccccc
Confidence 99999876688999999999987667766 4568888766444
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-28 Score=215.29 Aligned_cols=280 Identities=19% Similarity=0.275 Sum_probs=225.0
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC--C
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD--E 150 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~--d 150 (621)
.+.+....+.|+++.|+++|.+|++++ |+.++||+...+ .....+..+.-.|..++|......++.++. |
T Consensus 7 ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g-------~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d 79 (311)
T KOG1446|consen 7 AKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSG-------KQVKTINSKKYGVDLACFTHHSNTVIHSSTKED 79 (311)
T ss_pred ccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCC-------ceeeEeecccccccEEEEecCCceEEEccCCCC
Confidence 344666778999999999999999977 779999999988 677777777788999999876666666665 8
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
.+||..++.+++.+ +.+.||...|..++.+|-+..+++++.|.+|++||++..++...+
T Consensus 80 ~tIryLsl~dNkyl---------------------RYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l 138 (311)
T KOG1446|consen 80 DTIRYLSLHDNKYL---------------------RYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLL 138 (311)
T ss_pred CceEEEEeecCceE---------------------EEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEE
Confidence 89999999999864 788999999999999998899999999999999999988887777
Q ss_pred ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCce--eeeecccCCCCCCCccccccccccccccCCcccceeeeeec
Q psy15549 231 TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKK--VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 231 ~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 308 (621)
.....+| ++|+|.|-++|++.....|++||++.-. ....+.. ..+.....+.+.||
T Consensus 139 ~~~~~pi--~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i--------------------~~~~~~ew~~l~FS 196 (311)
T KOG1446|consen 139 NLSGRPI--AAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSI--------------------TDNDEAEWTDLEFS 196 (311)
T ss_pred ecCCCcc--eeECCCCcEEEEecCCCeEEEEEecccCCCCceeEcc--------------------CCCCccceeeeEEc
Confidence 5544444 7899999999999888899999998742 2122210 11234456889999
Q ss_pred CCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE
Q psy15549 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA 388 (621)
Q Consensus 309 pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (621)
|||++++.++
T Consensus 197 ~dGK~iLlsT---------------------------------------------------------------------- 206 (311)
T KOG1446|consen 197 PDGKSILLST---------------------------------------------------------------------- 206 (311)
T ss_pred CCCCEEEEEe----------------------------------------------------------------------
Confidence 9999888765
Q ss_pred cCCcEEEEeCCCCceeEEEecccccc---eEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCC-CCCcccccCCCC
Q psy15549 389 TENNILLYDTQHASPFAFIANIHYTK---LTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP-PSGEESKENDPT 464 (621)
Q Consensus 389 ~dg~i~iwd~~~~~~~~~~~~~h~~~---v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~ 464 (621)
..+.+++.|.-+|..+..+.. +... -.+.+|+|||+++++|+.||+|.+|++++|.....+.+ ..+.+.++.|.|
T Consensus 207 ~~s~~~~lDAf~G~~~~tfs~-~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP 285 (311)
T KOG1446|consen 207 NASFIYLLDAFDGTVKSTFSG-YPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNP 285 (311)
T ss_pred CCCcEEEEEccCCcEeeeEee-ccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCC
Confidence 456677777777776666632 3322 25788999999999999999999999999999998888 477888888888
Q ss_pred CCCCcccCCC
Q psy15549 465 KGEPVRSEDK 474 (621)
Q Consensus 465 ~~~~~~s~~~ 474 (621)
.-...++++.
T Consensus 286 ~~~mf~sa~s 295 (311)
T KOG1446|consen 286 RYAMFVSASS 295 (311)
T ss_pred ceeeeeecCc
Confidence 8777666554
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-29 Score=230.78 Aligned_cols=286 Identities=22% Similarity=0.320 Sum_probs=226.3
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
++..-.| ++|.+++|+|..+ +-+|+.++ -.+. |++..+..... ++......|+
T Consensus 20 ~~~~ke~-~~vssl~fsp~~P----~d~aVt~S-~rvq--------------ly~~~~~~~~k-------~~srFk~~v~ 72 (487)
T KOG0310|consen 20 PPVHKEH-NSVSSLCFSPKHP----YDFAVTSS-VRVQ--------------LYSSVTRSVRK-------TFSRFKDVVY 72 (487)
T ss_pred ccccccc-CcceeEecCCCCC----CceEEecc-cEEE--------------EEecchhhhhh-------hHHhhcccee
Confidence 3444444 4899999999877 34444443 3455 77766554433 2556678999
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEEccCCCC
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
+++|-.||++||+|+ .|.|+|+|.... ..++.+.+|+.+|..+.|+|+ +..|++|+.|+.+++||+.+...
T Consensus 73 s~~fR~DG~LlaaGD~sG~V~vfD~k~r-------~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v 145 (487)
T KOG0310|consen 73 SVDFRSDGRLLAAGDESGHVKVFDMKSR-------VILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV 145 (487)
T ss_pred EEEeecCCeEEEccCCcCcEEEeccccH-------HHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEE
Confidence 999999999999999 788999996653 567889999999999999994 56788899999999999988862
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCC-cEEEEeccCCcceEEEE
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKG-KNLGILTEHKKFVQGVA 241 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~l~ 241 (621)
...+.+|...|.|.+|+|.. ..+++|+.||.|++||++.. ..+..+ .|..+|..+.
T Consensus 146 ---------------------~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl 203 (487)
T KOG0310|consen 146 ---------------------QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVL 203 (487)
T ss_pred ---------------------EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEE
Confidence 35678999999999999954 57899999999999999987 666666 5999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccc
Q psy15549 242 WDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCL 321 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~ 321 (621)
+-|.|..+++++. ..|++||+.+|..+-... ..|...|+|+.+..++..|+++
T Consensus 204 ~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~----------------------~~H~KtVTcL~l~s~~~rLlS~---- 256 (487)
T KOG0310|consen 204 ALPSGSLIASAGG-NSVKVWDLTTGGQLLTSM----------------------FNHNKTVTCLRLASDSTRLLSG---- 256 (487)
T ss_pred EcCCCCEEEEcCC-CeEEEEEecCCceehhhh----------------------hcccceEEEEEeecCCceEeec----
Confidence 9999999998864 579999998655432211 1345567888887777665554
Q ss_pred cCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC
Q psy15549 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA 401 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 401 (621)
+-|+.+++||+.+-
T Consensus 257 ------------------------------------------------------------------sLD~~VKVfd~t~~ 270 (487)
T KOG0310|consen 257 ------------------------------------------------------------------SLDRHVKVFDTTNY 270 (487)
T ss_pred ------------------------------------------------------------------ccccceEEEEccce
Confidence 46888899998887
Q ss_pred ceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 402 SPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 402 ~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
+.+..+. ..++|.+++.+||++.++.|..||.+.+-+..
T Consensus 271 Kvv~s~~--~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~ 309 (487)
T KOG0310|consen 271 KVVHSWK--YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRRE 309 (487)
T ss_pred EEEEeee--cccceeeEEecCCCceEEEecccceeeeehhh
Confidence 7777773 67899999999999999999999998877544
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=224.28 Aligned_cols=285 Identities=16% Similarity=0.272 Sum_probs=233.1
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
....|+++...|... .+.+|+.|..+. ++|....+.. ..+.||...|+.+.|+|
T Consensus 218 ~~pgi~ald~~~s~~-----~ilTGG~d~~av--------------~~d~~s~q~l-------~~~~Gh~kki~~v~~~~ 271 (506)
T KOG0289|consen 218 STPGITALDIIPSSS-----KILTGGEDKTAV--------------LFDKPSNQIL-------ATLKGHTKKITSVKFHK 271 (506)
T ss_pred CCCCeeEEeecCCCC-----cceecCCCCceE--------------EEecchhhhh-------hhccCcceEEEEEEecc
Confidence 345799999998855 999999998887 7887766553 45999999999999999
Q ss_pred CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 92 NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 92 dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
+...+++++ |..|+||..... ........|..+|+.+..+|.|.||++++.||+..+.|++++..+...
T Consensus 272 ~~~~v~~aSad~~i~vws~~~~-------s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~v--- 341 (506)
T KOG0289|consen 272 DLDTVITASADEIIRVWSVPLS-------SEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVV--- 341 (506)
T ss_pred chhheeecCCcceEEeeccccc-------cCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEE---
Confidence 999999988 888999999876 445567789999999999999999999999999999999999865211
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEE
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVA 250 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~ 250 (621)
.-....-.+++++|+|||.+|.+|..||.|+|||+.++..+..|.+|.++|..++|+.+|-||+
T Consensus 342 ----------------s~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~La 405 (506)
T KOG0289|consen 342 ----------------SDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLA 405 (506)
T ss_pred ----------------eeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEE
Confidence 1112345689999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcc
Q psy15549 251 TLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKP 330 (621)
Q Consensus 251 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~ 330 (621)
+++.|+.|++||++..+..+++... . ...+.++.|.+.|.+|+.++
T Consensus 406 t~add~~V~lwDLRKl~n~kt~~l~---------------------~-~~~v~s~~fD~SGt~L~~~g------------ 451 (506)
T KOG0289|consen 406 TAADDGSVKLWDLRKLKNFKTIQLD---------------------E-KKEVNSLSFDQSGTYLGIAG------------ 451 (506)
T ss_pred EEecCCeEEEEEehhhcccceeecc---------------------c-cccceeEEEcCCCCeEEeec------------
Confidence 9999999999999988766555311 1 11467889999998888765
Q ss_pred eeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCC--CCceeEEEe
Q psy15549 331 ISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQ--HASPFAFIA 408 (621)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~ 408 (621)
++=.|++++-. ....+..+
T Consensus 452 ----------------------------------------------------------~~l~Vy~~~k~~k~W~~~~~~- 472 (506)
T KOG0289|consen 452 ----------------------------------------------------------SDLQVYICKKKTKSWTEIKEL- 472 (506)
T ss_pred ----------------------------------------------------------ceeEEEEEecccccceeeehh-
Confidence 23334444422 23344444
Q ss_pred cccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 409 NIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 409 ~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
..|.+..+++.|....++++++|.|..++++.+
T Consensus 473 ~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 473 ADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred hhcccccceeeecccceEEeeccchhheEEeec
Confidence 347788999999999999999999999988864
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=228.89 Aligned_cols=293 Identities=17% Similarity=0.263 Sum_probs=240.3
Q ss_pred eccccccccCcEEEEEEccCC-CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC
Q psy15549 73 FASDLSRHQKAVNVVRFSPNG-ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE 150 (621)
Q Consensus 73 ~~~~~~~h~~~V~~l~~spdg-~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d 150 (621)
++..|.+|.++|.|++=+|.. ..+++|+ ||.|+||++... .+...+..|.+.|..+++.. ..+++++.|
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR-------~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdD 128 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQR-------ECIRTFKAHEGLVRGICVTQ--TSFFTVGDD 128 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhh-------hhhheeecccCceeeEEecc--cceEEecCC
Confidence 455689999999999999977 7788888 999999999987 77889999999999999987 678999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
.+|+.|.+... .+ ..+ ...+.+..+.-+..+..++|++. .|.|||.....++..+
T Consensus 129 KtvK~wk~~~~-p~---------------------~ti-lg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~sm 183 (433)
T KOG0268|consen 129 KTVKQWKIDGP-PL---------------------HTI-LGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSM 183 (433)
T ss_pred cceeeeeccCC-cc---------------------eee-eccccccccccccccccccccCc--eeeecccccCCcccee
Confidence 99999998763 22 222 23445677777777778888885 5999999999999999
Q ss_pred ccCCcceEEEEEcCCC-CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC
Q psy15549 231 TEHKKFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309 (621)
Q Consensus 231 ~~~~~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 309 (621)
.-....|.++.|+|.. ..|++|++|+.|.+||+++...++.+.. ...-+.++|+|
T Consensus 184 swG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~------------------------~mRTN~IswnP 239 (433)
T KOG0268|consen 184 SWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVIL------------------------TMRTNTICWNP 239 (433)
T ss_pred ecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeee------------------------eccccceecCc
Confidence 8788889999999976 4577788999999999999887765531 12236799999
Q ss_pred CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc
Q psy15549 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT 389 (621)
Q Consensus 310 dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (621)
.+-.+++++ .|..+..+|+.. +..|.....+|...+..+.|+| .|.-+++|+.
T Consensus 240 eafnF~~a~-----ED~nlY~~DmR~------l~~p~~v~~dhvsAV~dVdfsp----------------tG~Efvsgsy 292 (433)
T KOG0268|consen 240 EAFNFVAAN-----EDHNLYTYDMRN------LSRPLNVHKDHVSAVMDVDFSP----------------TGQEFVSGSY 292 (433)
T ss_pred cccceeecc-----ccccceehhhhh------hcccchhhcccceeEEEeccCC----------------Ccchhccccc
Confidence 887788887 899998888764 4677778889999999999998 7889999999
Q ss_pred CCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCccc
Q psy15549 390 ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY 450 (621)
Q Consensus 390 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~ 450 (621)
|.+|+||....+...-....-.-..|.++.||-|.+++++||+|+.|++|.....+-+..+
T Consensus 293 DksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Aseklgv~ 353 (433)
T KOG0268|consen 293 DKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKLGVI 353 (433)
T ss_pred cceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhhhcCCC
Confidence 9999999998876544442223457999999999999999999999999998866554444
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-28 Score=225.66 Aligned_cols=262 Identities=18% Similarity=0.234 Sum_probs=197.0
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccc-ccccCcEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDL-SRHQKAVN 85 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~ 85 (621)
.....|.-+|+||+++||.+ +.++++.+|.|.=|++.+.....- +|.-. ............- .+|...|.
T Consensus 136 ~~~~~H~~s~~~vals~d~~-----~~fsask~g~i~kw~v~tgk~~~~--i~~~~--ev~k~~~~~~k~~r~~h~keil 206 (479)
T KOG0299|consen 136 RVIGKHQLSVTSVALSPDDK-----RVFSASKDGTILKWDVLTGKKDRY--IIERD--EVLKSHGNPLKESRKGHVKEIL 206 (479)
T ss_pred eeeccccCcceEEEeecccc-----ceeecCCCcceeeeehhcCccccc--ccccc--hhhhhccCCCCcccccccceeE
Confidence 45666888999999999999 999999999999454444332210 22111 0000011111112 48999999
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
+++.|+||+|||+|+ |..|+||+..+. ..+..+.+|.+.|.+++|-.....|++++.|++|++|+++....+
T Consensus 207 ~~avS~Dgkylatgg~d~~v~Iw~~~t~-------ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~v 279 (479)
T KOG0299|consen 207 TLAVSSDGKYLATGGRDRHVQIWDCDTL-------EHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYV 279 (479)
T ss_pred EEEEcCCCcEEEecCCCceEEEecCccc-------chhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHH
Confidence 999999999999999 888999999987 677889999999999999988788999999999999999988754
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcC
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp 244 (621)
..+.+|...|..|....-++.+-+|+.|+++++|++.. .....+.++.+.+.|++|-.
T Consensus 280 ---------------------etlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~e-esqlifrg~~~sidcv~~In 337 (479)
T KOG0299|consen 280 ---------------------ETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPE-ESQLIFRGGEGSIDCVAFIN 337 (479)
T ss_pred ---------------------HHHhCCccceeeechhcccceEEeccccceeEEEeccc-cceeeeeCCCCCeeeEEEec
Confidence 56789999999999988888888888999999999944 33446778999999999965
Q ss_pred CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 245 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
...|++|+.+|.|.+|++...+.+........-.+.. ..-+.+.+|++++..|...++++++
T Consensus 338 -~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~-----------~~~~~~~Witsla~i~~sdL~asGS 399 (479)
T KOG0299|consen 338 -DEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPEL-----------DPVNGNFWITSLAVIPGSDLLASGS 399 (479)
T ss_pred -ccceeeccCCceEEEeeecccCceeEeeccccccCCc-----------cccccccceeeeEecccCceEEecC
Confidence 4568899999999999999988877654332211110 0011224667777766666666655
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=232.26 Aligned_cols=278 Identities=22% Similarity=0.284 Sum_probs=229.7
Q ss_pred cCcEEEEEEccCC-CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEcc
Q psy15549 81 QKAVNVVRFSPNG-ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 81 ~~~V~~l~~spdg-~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
.+.|.+++|||.. .-+|+.+.-.+.||+.... .....+......|.++.|-.||++||+|+..|.|+|||+.
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S~rvqly~~~~~-------~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k 98 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSSVRVQLYSSVTR-------SVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMK 98 (487)
T ss_pred cCcceeEecCCCCCCceEEecccEEEEEecchh-------hhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccc
Confidence 4689999999955 4577777888999998876 5566677778899999999999999999999999999966
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceE
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ 238 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 238 (621)
+... .+.+.+|..+|..+.|+|+ +..|++|+.|+.+++||+.+......+.+|...|+
T Consensus 99 ~r~i---------------------LR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR 157 (487)
T KOG0310|consen 99 SRVI---------------------LRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVR 157 (487)
T ss_pred cHHH---------------------HHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeE
Confidence 5332 3667899999999999994 56788899999999999999987778899999999
Q ss_pred EEEEcCCC-CEEEEEeCCCcEEEEEccCc-eeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 239 GVAWDPKN-QYVATLSSDRSLRTYSIQSK-KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 239 ~l~~sp~~-~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
|.+|+|-. ..+++|+.||.|++||++.. ..+.++ ++..+|.++.+-|.|..+++
T Consensus 158 ~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el------------------------nhg~pVe~vl~lpsgs~ias 213 (487)
T KOG0310|consen 158 CGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL------------------------NHGCPVESVLALPSGSLIAS 213 (487)
T ss_pred eeccccCCCeEEEecCCCceEEEEEeccCCceeEEe------------------------cCCCceeeEEEcCCCCEEEE
Confidence 99999954 57899999999999999986 344333 45667788999999888887
Q ss_pred ccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEE
Q psy15549 317 PSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLY 396 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw 396 (621)
++| ..|++|
T Consensus 214 AgG-----------------------------------------------------------------------n~vkVW 222 (487)
T KOG0310|consen 214 AGG-----------------------------------------------------------------------NSVKVW 222 (487)
T ss_pred cCC-----------------------------------------------------------------------CeEEEE
Confidence 763 578999
Q ss_pred eCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcc
Q psy15549 397 DTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPR 476 (621)
Q Consensus 397 d~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 476 (621)
|+.+|..+......|...|||+++..+++.|++++-|+.|++|++.+-+....+.-+ +.+..+..+|++..++.+-.+|
T Consensus 223 Dl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~-~pvLsiavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 223 DLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYP-GPVLSIAVSPDDQTVVIGMSNG 301 (487)
T ss_pred EecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeeecc-cceeeEEecCCCceEEEecccc
Confidence 998665444443449999999999999999999999999999998887777766554 4777888889988888887777
Q ss_pred cHHHhc
Q psy15549 477 SAEQAK 482 (621)
Q Consensus 477 ~~~~w~ 482 (621)
.+..-+
T Consensus 302 lv~~rr 307 (487)
T KOG0310|consen 302 LVSIRR 307 (487)
T ss_pred eeeeeh
Confidence 766553
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-28 Score=242.50 Aligned_cols=267 Identities=16% Similarity=0.232 Sum_probs=192.4
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCcccc------ccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcE
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGI------ANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTI 153 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~------~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i 153 (621)
..|.....++++..+++++ +.....|+...+.... ........+.+|.+.|++++|+| ++++|++|+.|++|
T Consensus 21 ~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtI 100 (493)
T PTZ00421 21 LNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTI 100 (493)
T ss_pred eccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEE
Confidence 4455555666654444444 3333455433321000 00011234678999999999999 88999999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEecc
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 232 (621)
++||+.+....... ......+.+|...|.+++|+|++ ++|++++.|+.|+|||+.+++.+..+..
T Consensus 101 kIWdi~~~~~~~~~--------------~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~ 166 (493)
T PTZ00421 101 MGWGIPEEGLTQNI--------------SDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKC 166 (493)
T ss_pred EEEecCCCcccccc--------------CcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcC
Confidence 99999865421110 01235678999999999999975 6999999999999999999999999999
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 312 (621)
|...|.+++|+|+|.+|++++.|+.|++||+++++.+..+..+... ....+.|.+++.
T Consensus 167 h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~----------------------~~~~~~w~~~~~ 224 (493)
T PTZ00421 167 HSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASA----------------------KSQRCLWAKRKD 224 (493)
T ss_pred CCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCC----------------------cceEEEEcCCCC
Confidence 9999999999999999999999999999999998877665433211 123566777766
Q ss_pred eEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCc
Q psy15549 313 LLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENN 392 (621)
Q Consensus 313 ~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 392 (621)
.+++++. ..+.|+.
T Consensus 225 ~ivt~G~------------------------------------------------------------------s~s~Dr~ 238 (493)
T PTZ00421 225 LIITLGC------------------------------------------------------------------SKSQQRQ 238 (493)
T ss_pred eEEEEec------------------------------------------------------------------CCCCCCe
Confidence 6655430 0125789
Q ss_pred EEEEeCCCCc-eeEEEecccccceEEEEEcCCCCeEEEEe-CCCcEEEEEecCCcCCccc
Q psy15549 393 ILLYDTQHAS-PFAFIANIHYTKLTDITWSSDGKVLIASS-TDGYCSIISFGDNEIGIPY 450 (621)
Q Consensus 393 i~iwd~~~~~-~~~~~~~~h~~~v~~~~~spdg~~l~s~s-~dg~i~iw~~~~~~~~~~~ 450 (621)
|++||+++.. ++......+...+....|++++++|++++ .||.|++|++.++++....
T Consensus 239 VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~ 298 (493)
T PTZ00421 239 IMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCS 298 (493)
T ss_pred EEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEe
Confidence 9999998754 33333222334566678999999999887 5999999999998766544
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-29 Score=217.46 Aligned_cols=297 Identities=16% Similarity=0.205 Sum_probs=234.9
Q ss_pred ccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccC-----------ccccccceecccccccCCCeEEEEECCCCCE
Q psy15549 76 DLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTER-----------ESGIANVEFASDLSRHQKAVNVVRFSPNGEL 143 (621)
Q Consensus 76 ~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~-----------~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~ 143 (621)
.+..|++++.+.+||+||.++|+|+ |..|+|.+++.. +.....-..++++..|.+.|+++.|+|....
T Consensus 107 ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~I 186 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETI 186 (430)
T ss_pred EEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhhe
Confidence 4788999999999999999999999 889999998732 1111122567788999999999999999999
Q ss_pred EEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC
Q psy15549 144 LASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK 223 (621)
Q Consensus 144 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~ 223 (621)
|++|+.|++|++||+......+.+ +. ......|.++.|+|.|.+|+.|..-..+++||+++
T Consensus 187 LiS~srD~tvKlFDfsK~saKrA~------------------K~-~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T 247 (430)
T KOG0640|consen 187 LISGSRDNTVKLFDFSKTSAKRAF------------------KV-FQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNT 247 (430)
T ss_pred EEeccCCCeEEEEecccHHHHHHH------------------HH-hhccceeeeEeecCCCceEEEecCCCceeEEeccc
Confidence 999999999999998765433221 11 23456799999999999999999999999999999
Q ss_pred CcEEEEe---ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCccc
Q psy15549 224 GKNLGIL---TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKS 300 (621)
Q Consensus 224 ~~~~~~~---~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (621)
.++...- ..|.+.|+++.+++.++..++++.||.|++||--+++++.++... ....
T Consensus 248 ~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~A---------------------H~gs 306 (430)
T KOG0640|consen 248 YQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNA---------------------HGGS 306 (430)
T ss_pred eeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhh---------------------cCCc
Confidence 8886554 358899999999999999999999999999999888888777432 2234
Q ss_pred ceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCC
Q psy15549 301 FFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLP 380 (621)
Q Consensus 301 ~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (621)
.|.+..|..+|+|+++.+
T Consensus 307 evcSa~Ftkn~kyiLsSG-------------------------------------------------------------- 324 (430)
T KOG0640|consen 307 EVCSAVFTKNGKYILSSG-------------------------------------------------------------- 324 (430)
T ss_pred eeeeEEEccCCeEEeecC--------------------------------------------------------------
Confidence 678888988888887765
Q ss_pred CcEEEEEEcCCcEEEEeCCCCceeEEEecc----cccceEEEEEcCCCCeEEEEe-CCCcEEEEEecCCcCCcccCC-CC
Q psy15549 381 YRIVIAVATENNILLYDTQHASPFAFIANI----HYTKLTDITWSSDGKVLIASS-TDGYCSIISFGDNEIGIPYVP-PS 454 (621)
Q Consensus 381 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----h~~~v~~~~~spdg~~l~s~s-~dg~i~iw~~~~~~~~~~~~~-~~ 454 (621)
.|..+++|.+.+++.+...... ....-+...|+....|++.-. ..+.+.-||..++.....+.. |.
T Consensus 325 --------~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn 396 (430)
T KOG0640|consen 325 --------KDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHN 396 (430)
T ss_pred --------CcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCC
Confidence 4556666666666666655431 112234455776667766553 356789999998877766654 88
Q ss_pred CcccccCCCCCCCCcccCCCcccHHHhc
Q psy15549 455 GEESKENDPTKGEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 455 ~~~~~~~~~~~~~~~~s~~~~~~~~~w~ 482 (621)
+.+..+..+|.+..+.+.+.|-.++.|-
T Consensus 397 ~a~R~i~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 397 GAVRWIVHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred CCceEEEeCCCCCceeeecccceeeeee
Confidence 8899999999999999999999999995
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=221.82 Aligned_cols=282 Identities=20% Similarity=0.297 Sum_probs=226.6
Q ss_pred cccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCC---CEEEEEeCCCcEE
Q psy15549 79 RHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG---ELLASGDDESTII 154 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g---~~l~s~s~dg~i~ 154 (621)
-|.+.|.++... +++|++|+ |+.+++|+... +....+.+|.++|.+++|.-.. ..|++++.|.+++
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~G--------k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~ 172 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKG--------KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLR 172 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEecCC--------ceEEEEecCCcceeeeEEEecCCccceEEEecCCceEE
Confidence 477888888877 78889988 99999999986 5677889999999998886432 3699999999999
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC------------
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH------------ 222 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~------------ 222 (621)
+|..+.+...-.. ...-.||...|.++...++|..+++|+.|.+|.||+..
T Consensus 173 Lw~~~~~~~~~~~-----------------~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~ 235 (423)
T KOG0313|consen 173 LWKWNVGENKVKA-----------------LKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSN 235 (423)
T ss_pred EEEecCchhhhhH-----------------HhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccch
Confidence 9998887654221 13334999999999999999999999999999999932
Q ss_pred -------------CCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccc
Q psy15549 223 -------------KGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKV 289 (621)
Q Consensus 223 -------------~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (621)
++.++.++.+|..+|.++.|++ ...+++++.|.+|+.||+.++.....+...
T Consensus 236 ~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~-------------- 300 (423)
T KOG0313|consen 236 RRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTN-------------- 300 (423)
T ss_pred hhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecC--------------
Confidence 1245667889999999999988 667899999999999999999887666422
Q ss_pred ccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecC
Q psy15549 290 VPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELK 369 (621)
Q Consensus 290 ~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (621)
..+.++.++|..++|++++
T Consensus 301 ----------ksl~~i~~~~~~~Ll~~gs--------------------------------------------------- 319 (423)
T KOG0313|consen 301 ----------KSLNCISYSPLSKLLASGS--------------------------------------------------- 319 (423)
T ss_pred ----------cceeEeecccccceeeecC---------------------------------------------------
Confidence 2346777777666665554
Q ss_pred CCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC--ceeEEEecccccceEEEEEcCCCC-eEEEEeCCCcEEEEEecCCc-
Q psy15549 370 PSDDKPLFKLPYRIVIAVATENNILLYDTQHA--SPFAFIANIHYTKLTDITWSSDGK-VLIASSTDGYCSIISFGDNE- 445 (621)
Q Consensus 370 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~h~~~v~~~~~spdg~-~l~s~s~dg~i~iw~~~~~~- 445 (621)
.|..|++||.+++ ..+.....+|.+.|.++.|+|... .|++++.|+++++||+.+..
T Consensus 320 -------------------sdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~ 380 (423)
T KOG0313|consen 320 -------------------SDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKA 380 (423)
T ss_pred -------------------CCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCC
Confidence 6778888887765 344444468999999999999765 68899999999999999876
Q ss_pred CCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhcc
Q psy15549 446 IGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKG 483 (621)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~ 483 (621)
.+..+.+|...+.++.+. ++..+++++.|..+++...
T Consensus 381 plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 381 PLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFKG 417 (423)
T ss_pred cceeeccCCceEEEEecc-CCceEEeccCcceEEEecc
Confidence 888899998888888874 4467888999988887653
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=210.37 Aligned_cols=284 Identities=15% Similarity=0.189 Sum_probs=234.4
Q ss_pred cccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIV 155 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~v 155 (621)
+.||..+++.+.|+.+|.+|.+++ |....+|....+ +.+-++.+|++.|+|+..+-+.+++++|+.|.++++
T Consensus 6 l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nG-------erlGty~GHtGavW~~Did~~s~~liTGSAD~t~kL 78 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNG-------ERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKL 78 (327)
T ss_pred cccCccccceEEecCCCcEEEEecCCCCceEEEecCC-------ceeeeecCCCceEEEEEecCCcceeeeccccceeEE
Confidence 789999999999999999999999 888999999877 778899999999999999999999999999999999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-----CCeEEEEECC-------C
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-----DNTAIMWDVH-------K 223 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-----dg~i~vwd~~-------~ 223 (621)
||+.+++++..+ .....|..+.|+++|++++.+.. .+.|.++|++ .
T Consensus 79 WDv~tGk~la~~----------------------k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s 136 (327)
T KOG0643|consen 79 WDVETGKQLATW----------------------KTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDS 136 (327)
T ss_pred EEcCCCcEEEEe----------------------ecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcc
Confidence 999999975332 45678999999999998887654 4679999998 4
Q ss_pred CcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCccccee
Q psy15549 224 GKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303 (621)
Q Consensus 224 ~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 303 (621)
.++...+..+...++.+-|.|-+++|++|..||.|.+||+++++.+..- ...|...|+
T Consensus 137 ~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s----------------------~~~h~~~In 194 (327)
T KOG0643|consen 137 EEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDS----------------------DEEHSSKIN 194 (327)
T ss_pred cCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeec----------------------hhhhccccc
Confidence 4567777778899999999999999999999999999999998654322 234455789
Q ss_pred eeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcE
Q psy15549 304 RLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRI 383 (621)
Q Consensus 304 ~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (621)
.+.+++|..++++++
T Consensus 195 d~q~s~d~T~FiT~s----------------------------------------------------------------- 209 (327)
T KOG0643|consen 195 DLQFSRDRTYFITGS----------------------------------------------------------------- 209 (327)
T ss_pred cccccCCcceEEecc-----------------------------------------------------------------
Confidence 999999999988877
Q ss_pred EEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCC--------------cEEEEEecCCcCCcc
Q psy15549 384 VIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDG--------------YCSIISFGDNEIGIP 449 (621)
Q Consensus 384 l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg--------------~i~iw~~~~~~~~~~ 449 (621)
.|.+-++||..+-..+.++. -..+|++.+++|-..+++.|+.-. .-++|++--.+....
T Consensus 210 -----~Dttakl~D~~tl~v~Kty~--te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigr 282 (327)
T KOG0643|consen 210 -----KDTTAKLVDVRTLEVLKTYT--TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGR 282 (327)
T ss_pred -----cCccceeeeccceeeEEEee--ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhcc
Confidence 45566677777777777764 457899999999877777664211 123444444456677
Q ss_pred cCCCCCcccccCCCCCCCCcccCCCcccHHHhcc
Q psy15549 450 YVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKG 483 (621)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~ 483 (621)
+.+|=++++.++++|+|+..++++.||.|++-..
T Consensus 283 vkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~F 316 (327)
T KOG0643|consen 283 VKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHF 316 (327)
T ss_pred ccccccCcceeEECCCCcccccCCCCceEEEEEe
Confidence 8899999999999999999999999999887543
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-29 Score=211.97 Aligned_cols=243 Identities=19% Similarity=0.294 Sum_probs=201.5
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
-.+.+..|+|++..+ +.+++++.||.++ |||...... ++..++.|...|.++.|++
T Consensus 59 ~~D~LfdV~Wse~~e----~~~~~a~GDGSLr--------------l~d~~~~s~------Pi~~~kEH~~EV~Svdwn~ 114 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHE----NQVIAASGDGSLR--------------LFDLTMPSK------PIHKFKEHKREVYSVDWNT 114 (311)
T ss_pred cccceeEeeecCCCc----ceEEEEecCceEE--------------EeccCCCCc------chhHHHhhhhheEEecccc
Confidence 467899999999887 6999999999999 888544333 4567999999999999999
Q ss_pred C-CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 92 N-GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 92 d-g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
. ++.+++++ |++|++|+...+ ..+.++.+|...|...+|+| ..+++++++.|+++++||++.....
T Consensus 115 ~~r~~~ltsSWD~TiKLW~~~r~-------~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~---- 183 (311)
T KOG0277|consen 115 VRRRIFLTSSWDGTIKLWDPNRP-------NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKF---- 183 (311)
T ss_pred ccceeEEeeccCCceEeecCCCC-------cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCce----
Confidence 4 45555666 999999999887 66788999999999999999 6789999999999999998876532
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCC-cEEEEeccCCcceEEEEEcCCC
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKG-KNLGILTEHKKFVQGVAWDPKN 246 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~l~~sp~~ 246 (621)
..+..|...|.|+.|+. +.+.|+||+.|+.|++||++.- .++..+.+|.-.|+.+.|||..
T Consensus 184 -----------------~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~ 246 (311)
T KOG0277|consen 184 -----------------MSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHH 246 (311)
T ss_pred -----------------eEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcch
Confidence 34678999999999998 6688999999999999999874 5678889999999999999964
Q ss_pred -CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC-CCeEEeccccccCC
Q psy15549 247 -QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD-GQLLIAPSGCLENS 324 (621)
Q Consensus 247 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd-g~~l~~~s~~~~~~ 324 (621)
..|++++.|-+++|||...+...... .+.|...+..+.||+- ..++|.++ +
T Consensus 247 ~~lLaSasYDmT~riw~~~~~ds~~e~----------------------~~~HtEFv~g~Dws~~~~~~vAs~g-----W 299 (311)
T KOG0277|consen 247 ASLLASASYDMTVRIWDPERQDSAIET----------------------VDHHTEFVCGLDWSLFDPGQVASTG-----W 299 (311)
T ss_pred hhHhhhccccceEEecccccchhhhhh----------------------hhccceEEeccccccccCceeeecc-----c
Confidence 67899999999999998754432221 1234556788999885 56777777 9
Q ss_pred CCCCcceee
Q psy15549 325 DSTRKPISV 333 (621)
Q Consensus 325 d~~i~~~~~ 333 (621)
|..+.+|+.
T Consensus 300 De~l~Vw~p 308 (311)
T KOG0277|consen 300 DELLYVWNP 308 (311)
T ss_pred ccceeeecc
Confidence 999999973
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-29 Score=232.50 Aligned_cols=307 Identities=17% Similarity=0.225 Sum_probs=228.8
Q ss_pred cccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcE
Q psy15549 75 SDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTI 153 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i 153 (621)
..+.+|+..|.++++.|.|..|++|+ |..|++||+.........+..+.....| .|++++|++.|..|++.+.....
T Consensus 161 i~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h--~i~sl~ys~Tg~~iLvvsg~aqa 238 (641)
T KOG0772|consen 161 IQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETH--QINSLQYSVTGDQILVVSGSAQA 238 (641)
T ss_pred EeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCccccc--ccceeeecCCCCeEEEEecCcce
Confidence 45789999999999999999999999 9999999999877655555555444444 78999999999988888888899
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCcE-EEEec
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKGKN-LGILT 231 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~~~-~~~~~ 231 (621)
+|+|-+...........+ .. .-.....+|...++|.+|+|+. ..+++++.||++++||+...+. ...++
T Consensus 239 kl~DRdG~~~~e~~KGDQ-YI--------~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik 309 (641)
T KOG0772|consen 239 KLLDRDGFEIVEFSKGDQ-YI--------RDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIK 309 (641)
T ss_pred eEEccCCceeeeeeccch-hh--------hhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEe
Confidence 999965443322111111 11 1123457899999999999965 5789999999999999986543 22221
Q ss_pred -----cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcc--cceee
Q psy15549 232 -----EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMK--SFFRR 304 (621)
Q Consensus 232 -----~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~ 304 (621)
+..-+++.++|+++|++||+|+.||.|.+|+......-..+. ....|. ..|++
T Consensus 310 ~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~--------------------vk~AH~~g~~Its 369 (641)
T KOG0772|consen 310 TKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMK--------------------VKDAHLPGQDITS 369 (641)
T ss_pred eccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceE--------------------eeeccCCCCceeE
Confidence 234478999999999999999999999999986543322211 112222 36899
Q ss_pred eeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEE
Q psy15549 305 LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIV 384 (621)
Q Consensus 305 ~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 384 (621)
+.||+||++|++-+ .|
T Consensus 370 i~FS~dg~~LlSRg-----~D----------------------------------------------------------- 385 (641)
T KOG0772|consen 370 ISFSYDGNYLLSRG-----FD----------------------------------------------------------- 385 (641)
T ss_pred EEeccccchhhhcc-----CC-----------------------------------------------------------
Confidence 99999999998866 44
Q ss_pred EEEEcCCcEEEEeCCCCc-eeEEEec-ccccceEEEEEcCCCCeEEEEe------CCCcEEEEEecCCcCCcccCCCCCc
Q psy15549 385 IAVATENNILLYDTQHAS-PFAFIAN-IHYTKLTDITWSSDGKVLIASS------TDGYCSIISFGDNEIGIPYVPPSGE 456 (621)
Q Consensus 385 ~~~~~dg~i~iwd~~~~~-~~~~~~~-~h~~~v~~~~~spdg~~l~s~s------~dg~i~iw~~~~~~~~~~~~~~~~~ 456 (621)
+++++||++..+ ++..... ....+-+.++|||+.++|++|. ..|++.+||..+-+.++.+.-....
T Consensus 386 ------~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aS 459 (641)
T KOG0772|consen 386 ------DTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTAS 459 (641)
T ss_pred ------CceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCce
Confidence 455555554432 2222111 1233567899999999999986 3578999999999999988888888
Q ss_pred ccccCCCCCCCCcccCCCcccHHHhc
Q psy15549 457 ESKENDPTKGEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 457 ~~~~~~~~~~~~~~s~~~~~~~~~w~ 482 (621)
+....|+|.-..+..+..||.+++.=
T Consensus 460 vv~~~WhpkLNQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 460 VVRCLWHPKLNQIFAGSGDGTAHVYY 485 (641)
T ss_pred EEEEeecchhhheeeecCCCceEEEE
Confidence 88999999999999999999988854
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=209.66 Aligned_cols=322 Identities=20% Similarity=0.257 Sum_probs=233.0
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEE-EEEeCCC
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL-ASGDDES 151 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l-~s~s~dg 151 (621)
...+++|.+.|++++|+.||++||+++ |+.|++|++..-..... ..++. .-.-+-.+.++|+||-+-+ +++-...
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eH--r~~R~-nve~dhpT~V~FapDc~s~vv~~~~g~ 155 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEH--RCIRQ-NVEYDHPTRVVFAPDCKSVVVSVKRGN 155 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhh--hHhhc-cccCCCceEEEECCCcceEEEEEccCC
Confidence 456899999999999999999999988 88899999986422111 11111 1111245788999987744 4555666
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 231 (621)
++++|.+...+.- ..+. ....|.-......|...+..+-...++.+|++++.|..|.+|++. |+.+..+.
T Consensus 156 ~l~vyk~~K~~dG-~~~~--------~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~id 225 (420)
T KOG2096|consen 156 KLCVYKLVKKTDG-SGSH--------HFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSID 225 (420)
T ss_pred EEEEEEeeecccC-CCCc--------ccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeec
Confidence 8999987655431 1100 011111123344677788888888889999999999999999997 99998887
Q ss_pred cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC
Q psy15549 232 EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 311 (621)
.....-+..+.||+|+++++++.---|++|.+--++ ...+.....++....|.+.|..++|+++.
T Consensus 226 tnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~k---------------dG~fqev~rvf~LkGH~saV~~~aFsn~S 290 (420)
T KOG2096|consen 226 TNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTK---------------DGTFQEVKRVFSLKGHQSAVLAAAFSNSS 290 (420)
T ss_pred cccccccceeeCCCCcEEEEecCCCCceEEEEEecc---------------CcchhhhhhhheeccchhheeeeeeCCCc
Confidence 777777788999999999999999999999874221 12234556678888999999999999999
Q ss_pred CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
..+++.+ .||++++|+..-.+............+ .+..+..-.|.-..+. +.+.+++.+...
T Consensus 291 ~r~vtvS-----kDG~wriwdtdVrY~~~qDpk~Lk~g~---~pl~aag~~p~RL~ls----------P~g~~lA~s~gs 352 (420)
T KOG2096|consen 291 TRAVTVS-----KDGKWRIWDTDVRYEAGQDPKILKEGS---APLHAAGSEPVRLELS----------PSGDSLAVSFGS 352 (420)
T ss_pred ceeEEEe-----cCCcEEEeeccceEecCCCchHhhcCC---cchhhcCCCceEEEeC----------CCCcEEEeecCC
Confidence 9999999 999999999876665443322221111 1111111122222222 235577778888
Q ss_pred cEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 392 NILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 392 ~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
.+.+|..++++....+...|...|++++|+++|++++|++ |..++++.-.
T Consensus 353 ~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~nt 402 (420)
T KOG2096|consen 353 DLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIRNT 402 (420)
T ss_pred ceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeecCC
Confidence 9999999999988888888999999999999999999996 6788888733
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=245.29 Aligned_cols=270 Identities=21% Similarity=0.326 Sum_probs=202.9
Q ss_pred eccccc-ccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC---------------------CCCC--------
Q psy15549 121 FASDLS-RHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE---------------------FPSS-------- 170 (621)
Q Consensus 121 ~~~~~~-~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~---------------------~~~~-------- 170 (621)
..+.+. .|.+.|+++.||+||+|||+||.|+.|+||.+........ ....
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s 337 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS 337 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence 344556 8999999999999999999999999999999876111000 0000
Q ss_pred ----Cccccc--cc----ccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEE
Q psy15549 171 ----NLDEEN--VN----KEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240 (621)
Q Consensus 171 ----~~~~~~--~~----~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 240 (621)
...... .. .-.-.+...+.+|.+.|..+.||.+ ++|++++.|.+|++|++...+++..| .|...|+|+
T Consensus 338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F-~HndfVTcV 415 (712)
T KOG0283|consen 338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVF-SHNDFVTCV 415 (712)
T ss_pred ccccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEE-ecCCeeEEE
Confidence 000000 00 0011234668899999999999965 59999999999999999999999999 599999999
Q ss_pred EEcC-CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccc
Q psy15549 241 AWDP-KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSG 319 (621)
Q Consensus 241 ~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~ 319 (621)
+|+| |.+||++|+-||.||||++...+.+.-. .....|++++|+|||++.++|+
T Consensus 416 aFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~------------------------Dl~~lITAvcy~PdGk~avIGt- 470 (712)
T KOG0283|consen 416 AFNPVDDRYFISGSLDGKVRLWSISDKKVVDWN------------------------DLRDLITAVCYSPDGKGAVIGT- 470 (712)
T ss_pred EecccCCCcEeecccccceEEeecCcCeeEeeh------------------------hhhhhheeEEeccCCceEEEEE-
Confidence 9999 7799999999999999999877665432 2335679999999999988887
Q ss_pred cccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCC
Q psy15549 320 CLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQ 399 (621)
Q Consensus 320 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 399 (621)
.+|.+++| ++.
T Consensus 471 ----~~G~C~fY-----------------------------------------------------------------~t~ 481 (712)
T KOG0283|consen 471 ----FNGYCRFY-----------------------------------------------------------------DTE 481 (712)
T ss_pred ----eccEEEEE-----------------------------------------------------------------Ecc
Confidence 55444444 444
Q ss_pred CCceeEEEe--------cccccceEEEEEcCCCC-eEEEEeCCCcEEEEEecCCcCCcccCCCCCc--ccccCCCCCCCC
Q psy15549 400 HASPFAFIA--------NIHYTKLTDITWSSDGK-VLIASSTDGYCSIISFGDNEIGIPYVPPSGE--ESKENDPTKGEP 468 (621)
Q Consensus 400 ~~~~~~~~~--------~~h~~~v~~~~~spdg~-~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 468 (621)
..+...... ..|. .|+.+.|.|... .|++.+.|..|||+|..+..++..+++.... -....|+.||+.
T Consensus 482 ~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~ 560 (712)
T KOG0283|consen 482 GLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKH 560 (712)
T ss_pred CCeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCE
Confidence 433222221 1233 899999997543 5777779999999999999999999985443 345678889999
Q ss_pred cccCCCcccHHHhcccCcc
Q psy15549 469 VRSEDKPRSAEQAKGEGKV 487 (621)
Q Consensus 469 ~~s~~~~~~~~~w~~~~~~ 487 (621)
+++++.|..|++|+.....
T Consensus 561 IVs~seDs~VYiW~~~~~~ 579 (712)
T KOG0283|consen 561 IVSASEDSWVYIWKNDSFN 579 (712)
T ss_pred EEEeecCceEEEEeCCCCc
Confidence 9999999999999975543
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=237.74 Aligned_cols=278 Identities=19% Similarity=0.287 Sum_probs=235.9
Q ss_pred EEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 85 NVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 85 ~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
+-+.|+ ..+.||+|....|.+|+...+. .......+...|+++.|+++|.+|++|..+|.|.|||..+.+.+
T Consensus 181 nlldWs-s~n~laValg~~vylW~~~s~~-------v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~ 252 (484)
T KOG0305|consen 181 NLLDWS-SANVLAVALGQSVYLWSASSGS-------VTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKT 252 (484)
T ss_pred hHhhcc-cCCeEEEEecceEEEEecCCCc-------eEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhcccc
Confidence 346677 5678999999999999998873 22222334789999999999999999999999999999988876
Q ss_pred CCCCCCCcccccccccceeeeeeecC-CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE-eccCCcceEEEEE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRG-HLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI-LTEHKKFVQGVAW 242 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~v~~l~~ 242 (621)
. .+.+ |...|-+++|+ +..+.+|+.++.|..+|++..+.... +.+|...|..+.|
T Consensus 253 ~---------------------~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkw 309 (484)
T KOG0305|consen 253 R---------------------TLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKW 309 (484)
T ss_pred c---------------------cccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEE
Confidence 4 3355 99999999998 66899999999999999998776555 7889999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC-CeEEeccccc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG-QLLIAPSGCL 321 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg-~~l~~~s~~~ 321 (621)
++|+++||+|+.|+.+.|||......+..+. .|...|..++|+|-. ..||+|+
T Consensus 310 s~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~-----------------------~H~aAVKA~awcP~q~~lLAsGG--- 363 (484)
T KOG0305|consen 310 SPDGNQLASGGNDNVVFIWDGLSPEPKFTFT-----------------------EHTAAVKALAWCPWQSGLLATGG--- 363 (484)
T ss_pred CCCCCeeccCCCccceEeccCCCccccEEEe-----------------------ccceeeeEeeeCCCccCceEEcC---
Confidence 9999999999999999999996655555443 556778999999964 4556555
Q ss_pred cCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC
Q psy15549 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA 401 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 401 (621)
|+.|+.|++||..++
T Consensus 364 -----------------------------------------------------------------Gs~D~~i~fwn~~~g 378 (484)
T KOG0305|consen 364 -----------------------------------------------------------------GSADRCIKFWNTNTG 378 (484)
T ss_pred -----------------------------------------------------------------CCcccEEEEEEcCCC
Confidence 246899999999999
Q ss_pred ceeEEEecccccceEEEEEcCCCCeEEEE--eCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHH
Q psy15549 402 SPFAFIANIHYTKLTDITWSSDGKVLIAS--STDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAE 479 (621)
Q Consensus 402 ~~~~~~~~~h~~~v~~~~~spdg~~l~s~--s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 479 (621)
..+..+. -...|.+|.|++..+-|+++ -.++.|.||++.+-.....+.+|...+..+..+|||+.+++++.|++++
T Consensus 379 ~~i~~vd--tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlr 456 (484)
T KOG0305|consen 379 ARIDSVD--TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLR 456 (484)
T ss_pred cEecccc--cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEE
Confidence 9999885 45789999999999877765 3677899999999999999999999999999999999999999999999
Q ss_pred HhcccCc
Q psy15549 480 QAKGEGK 486 (621)
Q Consensus 480 ~w~~~~~ 486 (621)
+|+.-+.
T Consensus 457 fw~~f~~ 463 (484)
T KOG0305|consen 457 FWNLFDE 463 (484)
T ss_pred eccccCC
Confidence 9986543
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=208.18 Aligned_cols=280 Identities=19% Similarity=0.307 Sum_probs=236.6
Q ss_pred ccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC
Q psy15549 123 SDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP 202 (621)
Q Consensus 123 ~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp 202 (621)
+.+.+|...|.+++|+.+|..|++|+.|+++.+|+++....... ....+|.+.|-.++|+|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~-------------------~~~~gh~~svdql~w~~ 74 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKE-------------------LVYRGHTDSVDQLCWDP 74 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhh-------------------hcccCCCcchhhheeCC
Confidence 55678999999999999999999999999999999988754322 34578999999999998
Q ss_pred -CCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCC
Q psy15549 203 -TSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDS 281 (621)
Q Consensus 203 -d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 281 (621)
...+|++++.|.+|++||+++++++..+....+.+ -+.|+|+|.+++.++.|..|.+.|.++.+.+...
T Consensus 75 ~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~--------- 144 (313)
T KOG1407|consen 75 KHPDLFATASGDKTIRIWDIRSGKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTYKIVNEE--------- 144 (313)
T ss_pred CCCcceEEecCCceEEEEEeccCcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecccceeehh---------
Confidence 55789999999999999999999999887666655 5789999999999999999999999988766544
Q ss_pred ccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeec
Q psy15549 282 SHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKC 361 (621)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (621)
.....+..++|+.++.+++..+ ..|.+.|..... -.|+..+..|.....++.|
T Consensus 145 ---------------~~~~e~ne~~w~~~nd~Fflt~-----GlG~v~ILsyps-------Lkpv~si~AH~snCicI~f 197 (313)
T KOG1407|consen 145 ---------------QFKFEVNEISWNNSNDLFFLTN-----GLGCVEILSYPS-------LKPVQSIKAHPSNCICIEF 197 (313)
T ss_pred ---------------cccceeeeeeecCCCCEEEEec-----CCceEEEEeccc-------cccccccccCCcceEEEEE
Confidence 2334567889998888877766 467777766543 4677788899999999999
Q ss_pred cceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 362 CPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
.| .|+++++|+.|..+.+||+..--+++.+.. +.-+|..+.||.||++||+||.|..|-|=++
T Consensus 198 ~p----------------~GryfA~GsADAlvSLWD~~ELiC~R~isR-ldwpVRTlSFS~dg~~lASaSEDh~IDIA~v 260 (313)
T KOG1407|consen 198 DP----------------DGRYFATGSADALVSLWDVDELICERCISR-LDWPVRTLSFSHDGRMLASASEDHFIDIAEV 260 (313)
T ss_pred CC----------------CCceEeeccccceeeccChhHhhhheeecc-ccCceEEEEeccCcceeeccCccceEEeEec
Confidence 98 889999999999999999999988888854 8899999999999999999999999999999
Q ss_pred cCCcCCcccCCCCCcccccCCCCCCCCcccCCCcc
Q psy15549 442 GDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPR 476 (621)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 476 (621)
++|..+..++. .++...++++|....|+.+..|.
T Consensus 261 etGd~~~eI~~-~~~t~tVAWHPk~~LLAyA~ddk 294 (313)
T KOG1407|consen 261 ETGDRVWEIPC-EGPTFTVAWHPKRPLLAYACDDK 294 (313)
T ss_pred ccCCeEEEeec-cCCceeEEecCCCceeeEEecCC
Confidence 99987766654 44667789999988888775553
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-27 Score=229.10 Aligned_cols=436 Identities=15% Similarity=0.140 Sum_probs=295.2
Q ss_pred ccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccc-eeEEe---------ccccccccceee
Q psy15549 4 TIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTG-KIWYL---------TERESGIANVEF 73 (621)
Q Consensus 4 ~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~-~iw~~---------~~~~~~~~~~~~ 73 (621)
....-+.+|.++|.+++|...+. +..+||+++.|.+||+|.+.......+. +=-+. .........+.+
T Consensus 182 ~~v~el~GH~DWIrsl~f~~~~~--~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ 259 (764)
T KOG1063|consen 182 ARVAELEGHTDWIRSLAFARLGG--DDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISF 259 (764)
T ss_pred eEEEEeeccchhhhhhhhhccCC--CcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEeh
Confidence 33445678999999999997663 4469999999999996654322111000 00000 000000011222
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
...+.||.+.|+++.|+|.+..|++++ |..+.+|.......-......+-.+.+..+......|+|+++.+++-+..|.
T Consensus 260 eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg 339 (764)
T KOG1063|consen 260 EALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGG 339 (764)
T ss_pred hhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCc
Confidence 345679999999999999997777776 9999999887664332222333344456677899999999999999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC----cEEE
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG----KNLG 228 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~----~~~~ 228 (621)
.++|..... ..|.......||...|..++|+|.|.+|++.+.|.+-|++---.. ..+.
T Consensus 340 ~hlWkt~d~------------------~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEia 401 (764)
T KOG1063|consen 340 FHLWKTKDK------------------TFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIA 401 (764)
T ss_pred EEEEeccCc------------------cceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeec
Confidence 999982221 235555677899999999999999999999999999999865311 2233
Q ss_pred EeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCce----------------------eeeecccCCCCCCC-----
Q psy15549 229 ILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKK----------------------VISRACRSKLPVDS----- 281 (621)
Q Consensus 229 ~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~----------------------~~~~~~~~~~~~~~----- 281 (621)
.-+-|...++|++|-+....|++|.....+|+|+....- .+..+.....+...
T Consensus 402 RPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~ 481 (764)
T KOG1063|consen 402 RPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNT 481 (764)
T ss_pred ccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCccccccc
Confidence 345688889999998866778889899999999864210 00000000011110
Q ss_pred ccc--------------------ccccc------ccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeee
Q psy15549 282 SHE--------------------LFDKV------VPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTH 335 (621)
Q Consensus 282 ~~~--------------------~~~~~------~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~ 335 (621)
+.. ..+.. ..+.....|...|.+++.+|+|+++|+++......-..|++|+...
T Consensus 482 G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~ 561 (764)
T KOG1063|consen 482 GGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTAN 561 (764)
T ss_pred ccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccc
Confidence 000 00000 0001234566779999999999999999854444555667777553
Q ss_pred eeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE---EEecccc
Q psy15549 336 VFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA---FIANIHY 412 (621)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~h~ 412 (621)
......+.+|...++.+.|+| ++++|++++.|+++.+|......... .....|.
T Consensus 562 -------W~~~~~L~~HsLTVT~l~FSp----------------dg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~Ht 618 (764)
T KOG1063|consen 562 -------WLQVQELEGHSLTVTRLAFSP----------------DGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHT 618 (764)
T ss_pred -------hhhhheecccceEEEEEEECC----------------CCcEEEEeecCceEEeeeeecccchhhhhccccccc
Confidence 334457889999999999998 89999999999999999975543211 1124799
Q ss_pred cceEEEEEcCCCCeEEEEeCCCcEEEEEecCC--cCCccc--CCCCCcccccCCCCCCC-----CcccCCCcccHHHhc
Q psy15549 413 TKLTDITWSSDGKVLIASSTDGYCSIISFGDN--EIGIPY--VPPSGEESKENDPTKGE-----PVRSEDKPRSAEQAK 482 (621)
Q Consensus 413 ~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~-----~~~s~~~~~~~~~w~ 482 (621)
.-|.++.|+|++.++||+|.|.+|++|....+ +.+..+ ...+..++.+.+.+... .++.+-..|.|.+|+
T Consensus 619 RIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~ 697 (764)
T KOG1063|consen 619 RIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWR 697 (764)
T ss_pred eEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEe
Confidence 99999999999999999999999999999877 443332 22444555554433221 334445566777776
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=210.20 Aligned_cols=247 Identities=20% Similarity=0.317 Sum_probs=199.4
Q ss_pred ceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEE
Q psy15549 119 VEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198 (621)
Q Consensus 119 ~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 198 (621)
+.+...+..|.+.|++++. ++.++|+|+.|-+|+|||+....++ ..+-.|.+.|+++
T Consensus 33 l~~lF~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~ql---------------------g~ll~HagsitaL 89 (362)
T KOG0294|consen 33 LKPLFAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQL---------------------GILLSHAGSITAL 89 (362)
T ss_pred eeccccccccccceeEEEe--cceeEeccCCCCcEEEEeccchhhh---------------------cceeccccceEEE
Confidence 4556677889999999999 5889999999999999999998876 4556899999999
Q ss_pred EECCCCC--EEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCC
Q psy15549 199 SWSPTST--HLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSK 276 (621)
Q Consensus 199 ~~spd~~--~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 276 (621)
.|.+... +|++|+.||.|.+|+.....++.++++|.+.|+.++.+|.|+.-++.+.|+.+++|++-.|+.-..+...
T Consensus 90 ~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~- 168 (362)
T KOG0294|consen 90 KFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK- 168 (362)
T ss_pred EecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC-
Confidence 9998764 8999999999999999999999999999999999999999999999999999999999888765544321
Q ss_pred CCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccce
Q psy15549 277 LPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYS 356 (621)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (621)
..-+.+.|+|.|.+++++. ...+.+|.+...........+ ..+
T Consensus 169 -----------------------~~at~v~w~~~Gd~F~v~~------~~~i~i~q~d~A~v~~~i~~~--------~r~ 211 (362)
T KOG0294|consen 169 -----------------------NKATLVSWSPQGDHFVVSG------RNKIDIYQLDNASVFREIENP--------KRI 211 (362)
T ss_pred -----------------------CcceeeEEcCCCCEEEEEe------ccEEEEEecccHhHhhhhhcc--------ccc
Confidence 2225599999999888765 345556654421111111110 112
Q ss_pred eeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEE--cCCCCeEEEEeCCC
Q psy15549 357 VAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITW--SSDGKVLIASSTDG 434 (621)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~--spdg~~l~s~s~dg 434 (621)
.+ +...++..+++|++++.|.+||..+..+...+ .+|..+|.++.+ .|++.+|+|+|.||
T Consensus 212 l~-----------------~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~-~AH~~RVK~i~~~~~~~~~~lvTaSSDG 273 (362)
T KOG0294|consen 212 LC-----------------ATFLDGSELLVGGDNEWISLKDTDSDTPLTEF-LAHENRVKDIASYTNPEHEYLVTASSDG 273 (362)
T ss_pred ee-----------------eeecCCceEEEecCCceEEEeccCCCccceee-ecchhheeeeEEEecCCceEEEEeccCc
Confidence 22 22335688999999999999999998888887 469999999984 56788999999999
Q ss_pred cEEEEEecCC
Q psy15549 435 YCSIISFGDN 444 (621)
Q Consensus 435 ~i~iw~~~~~ 444 (621)
.|++||++..
T Consensus 274 ~I~vWd~~~~ 283 (362)
T KOG0294|consen 274 FIKVWDIDME 283 (362)
T ss_pred eEEEEEcccc
Confidence 9999999855
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-28 Score=213.81 Aligned_cols=299 Identities=19% Similarity=0.285 Sum_probs=235.7
Q ss_pred ccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCc
Q psy15549 4 TIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA 83 (621)
Q Consensus 4 ~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~ 83 (621)
...+.+.+|+++|+.++.....+ .+.+++.|.+.+ ||.+..+.+... +.||.+.
T Consensus 139 ~lvre~~GHkDGiW~Vaa~~tqp-----i~gtASADhTA~--------------iWs~Esg~CL~~-------Y~GH~GS 192 (481)
T KOG0300|consen 139 RLVRELEGHKDGIWHVAADSTQP-----ICGTASADHTAR--------------IWSLESGACLAT-------YTGHTGS 192 (481)
T ss_pred eehhhhcccccceeeehhhcCCc-----ceeeccccccee--------------EEeeccccceee-------ecccccc
Confidence 34455678999999999998887 999999999999 999999988655 9999999
Q ss_pred EEEEEEccCCCEEEEEc-CCceEEEEe------ccCc---------------------------cccccceecccccccC
Q psy15549 84 VNVVRFSPNGELLASGD-DVGKEIWYL------TERE---------------------------SGIANVEFASDLSRHQ 129 (621)
Q Consensus 84 V~~l~~spdg~~las~~-d~~v~iw~~------~~~~---------------------------~~~~~~~~~~~~~~h~ 129 (621)
|+++.|++.+.++++++ |..-.||.. .... .....-.++..+.+|.
T Consensus 193 VNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~ 272 (481)
T KOG0300|consen 193 VNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHR 272 (481)
T ss_pred eeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccc
Confidence 99999999999999988 888889872 2210 0000113455688999
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEE
Q psy15549 130 KAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLIS 209 (621)
Q Consensus 130 ~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s 209 (621)
..|.+..|...|+.+++++.|.+..+||++++..+ ..+.+|....+.++-+|..+++++
T Consensus 273 ~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v---------------------~~LtGHd~ELtHcstHptQrLVvT 331 (481)
T KOG0300|consen 273 AVVSACDWLAGGQQMVTASWDRTANLWDVETGEVV---------------------NILTGHDSELTHCSTHPTQRLVVT 331 (481)
T ss_pred cceEehhhhcCcceeeeeeccccceeeeeccCcee---------------------ccccCcchhccccccCCcceEEEE
Confidence 99999999999999999999999999999999865 677899999999999999999999
Q ss_pred EeCCCeEEEEECCCC-cEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCcee-eeecccCCCCCCCcccccc
Q psy15549 210 GSVDNTAIMWDVHKG-KNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV-ISRACRSKLPVDSSHELFD 287 (621)
Q Consensus 210 ~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~ 287 (621)
++.|.+.++||.+.. ..+..|.+|...|+++.|.-+. .+++|+.|.+|++||+++.+. +.++.
T Consensus 332 sSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd-~vVSgSDDrTvKvWdLrNMRsplATIR-------------- 396 (481)
T KOG0300|consen 332 SSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD-RVVSGSDDRTVKVWDLRNMRSPLATIR-------------- 396 (481)
T ss_pred eccCceeEeccchhhcceeeeecccccceeEEEEecCC-ceeecCCCceEEEeeeccccCcceeee--------------
Confidence 999999999999743 4567889999999999998765 578999999999999987542 22221
Q ss_pred ccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeee
Q psy15549 288 KVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFE 367 (621)
Q Consensus 288 ~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (621)
..+.++.++.+..+..|+.
T Consensus 397 ----------tdS~~NRvavs~g~~iIAi--------------------------------------------------- 415 (481)
T KOG0300|consen 397 ----------TDSPANRVAVSKGHPIIAI--------------------------------------------------- 415 (481)
T ss_pred ----------cCCccceeEeecCCceEEe---------------------------------------------------
Confidence 1122344444443333333
Q ss_pred cCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEE---EecccccceEEEEEcCCC--CeEEEEeCCCcEEEEEec
Q psy15549 368 LKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAF---IANIHYTKLTDITWSSDG--KVLIASSTDGYCSIISFG 442 (621)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~---~~~~h~~~v~~~~~spdg--~~l~s~s~dg~i~iw~~~ 442 (621)
--.+..|++||+......+. -..+|..-|+|++|..+- .-|++|+.|..+.=|.+.
T Consensus 416 -------------------PhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in 476 (481)
T KOG0300|consen 416 -------------------PHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKIN 476 (481)
T ss_pred -------------------ccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEec
Confidence 22456899999876553322 224799999999998764 358899999999999987
Q ss_pred CC
Q psy15549 443 DN 444 (621)
Q Consensus 443 ~~ 444 (621)
..
T Consensus 477 ~p 478 (481)
T KOG0300|consen 477 TP 478 (481)
T ss_pred cc
Confidence 53
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-27 Score=226.83 Aligned_cols=345 Identities=15% Similarity=0.186 Sum_probs=255.5
Q ss_pred eEEEeccccccCCcceEEEEecCCceEEeeeccCcccc--------ccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRL--------KTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~--------~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
.-++.|++... .|.....|..+.|||++..+.+ ++.+||++++-.. .-|...-.|
T Consensus 327 ~IA~~Fdet~~-----klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~-----------nv~~~~~ac- 389 (1080)
T KOG1408|consen 327 AIACQFDETTD-----KLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPC-----------NVHSPTAAC- 389 (1080)
T ss_pred eeEEEecCCCc-----eEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccc-----------cccCccccc-
Confidence 45778999888 9999999999998888766554 5667888775442 112222222
Q ss_pred EEccCCCEEEEEcCCceEEEEeccCccccc---c---------------c------------eecccccccCCCeEEEEE
Q psy15549 88 RFSPNGELLASGDDVGKEIWYLTERESGIA---N---------------V------------EFASDLSRHQKAVNVVRF 137 (621)
Q Consensus 88 ~~spdg~~las~~d~~v~iw~~~~~~~~~~---~---------------~------------~~~~~~~~h~~~V~~i~~ 137 (621)
-|.+-++.+.+|++|++|++........ . . +......+....+.+++.
T Consensus 390 --lp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~v 467 (1080)
T KOG1408|consen 390 --LPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAV 467 (1080)
T ss_pred --CCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEE
Confidence 2455566666699999999987321110 0 0 000112234567999999
Q ss_pred CCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC---CCCEEEEEeCCC
Q psy15549 138 SPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP---TSTHLISGSVDN 214 (621)
Q Consensus 138 sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp---d~~~l~s~~~dg 214 (621)
+|+|++||+|..-|+++||++..-... .....|...|.|+.|+- ..++||+++.|.
T Consensus 468 Sp~gqhLAsGDr~GnlrVy~Lq~l~~~---------------------~~~eAHesEilcLeyS~p~~~~kLLASasrdR 526 (1080)
T KOG1408|consen 468 SPDGQHLASGDRGGNLRVYDLQELEYT---------------------CFMEAHESEILCLEYSFPVLTNKLLASASRDR 526 (1080)
T ss_pred CCCcceecccCccCceEEEEehhhhhh---------------------hheecccceeEEEeecCchhhhHhhhhccCCc
Confidence 999999999999999999999887754 45578999999999985 457899999999
Q ss_pred eEEEEECCC-CcEEEEeccCCcceEEEEEcCCC--CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccccc
Q psy15549 215 TAIMWDVHK-GKNLGILTEHKKFVQGVAWDPKN--QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVP 291 (621)
Q Consensus 215 ~i~vwd~~~-~~~~~~~~~~~~~v~~l~~sp~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (621)
.|+|||+.. ..+++++.+|...|+++.|.-+| ..+++++.|..|.+--.+.......+..+.
T Consensus 527 lIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t--------------- 591 (1080)
T KOG1408|consen 527 LIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHT--------------- 591 (1080)
T ss_pred eEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccc---------------
Confidence 999999864 45677889999999999998877 678899999876543332211111121111
Q ss_pred ccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCC
Q psy15549 292 LFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPS 371 (621)
Q Consensus 292 ~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (621)
....+..+..|+..|..+++++++ .|..|+++++........+.. -.++.+....+...|
T Consensus 592 ---~t~~ktTlYDm~Vdp~~k~v~t~c-----QDrnirif~i~sgKq~k~FKg----s~~~eG~lIKv~lDP-------- 651 (1080)
T KOG1408|consen 592 ---QTLSKTTLYDMAVDPTSKLVVTVC-----QDRNIRIFDIESGKQVKSFKG----SRDHEGDLIKVILDP-------- 651 (1080)
T ss_pred ---cccccceEEEeeeCCCcceEEEEe-----cccceEEEeccccceeeeecc----cccCCCceEEEEECC--------
Confidence 112234568999999999999999 999999999876544433322 123334444444444
Q ss_pred CCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 372 DDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 372 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
.+-++++.+.|.++.++|..+++++.++. ||...|+.+.|.+|-+.|++.+.||.|.||.+...
T Consensus 652 --------SgiY~atScsdktl~~~Df~sgEcvA~m~-GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~~ 715 (1080)
T KOG1408|consen 652 --------SGIYLATSCSDKTLCFVDFVSGECVAQMT-GHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPLT 715 (1080)
T ss_pred --------CccEEEEeecCCceEEEEeccchhhhhhc-CcchheeeeeecccchhheeecCCceEEEEECchh
Confidence 67899999999999999999999999984 79999999999999999999999999999998753
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=227.99 Aligned_cols=284 Identities=20% Similarity=0.272 Sum_probs=234.2
Q ss_pred ccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEE
Q psy15549 76 DLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154 (621)
Q Consensus 76 ~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~ 154 (621)
.+..|.+.|..+.|-++...|++|+ |..|++|+..... ......+.+..+.|+.+.|.++++++++++.|+.++
T Consensus 170 ~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k-----~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r 244 (459)
T KOG0288|consen 170 VLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK-----SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLR 244 (459)
T ss_pred hhhccccccceeEEccCcchhhhcchhhhhhhhhcccch-----hhhhhhhhccCCCcceeeecCCCceEEeecCCCcee
Confidence 4788999999999999988888877 9999999998763 257788889999999999999999999999999999
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCC
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHK 234 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 234 (621)
+|++...+.. ..+.+|...|+++.|......+++|+.|.+|++||+....+.+++.. .
T Consensus 245 ~Wnvd~~r~~---------------------~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~-~ 302 (459)
T KOG0288|consen 245 LWNVDSLRLR---------------------HTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP-G 302 (459)
T ss_pred eeeccchhhh---------------------hhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccc-c
Confidence 9999998865 66789999999999998777799999999999999999888877643 3
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeE
Q psy15549 235 KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL 314 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l 314 (621)
..+..++.+ ...+++|..|+.|++||.++........ ..+.|+++..+++|..+
T Consensus 303 S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~------------------------~gg~vtSl~ls~~g~~l 356 (459)
T KOG0288|consen 303 SQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVP------------------------LGGRVTSLDLSMDGLEL 356 (459)
T ss_pred ccccceEec--ceeeeecccccceEEEeccCCceeeEee------------------------cCcceeeEeeccCCeEE
Confidence 445556655 5678899999999999999988776653 34567899999999888
Q ss_pred EeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEE
Q psy15549 315 IAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNIL 394 (621)
Q Consensus 315 ~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 394 (621)
.+++ .|.++.
T Consensus 357 Lsss-----RDdtl~----------------------------------------------------------------- 366 (459)
T KOG0288|consen 357 LSSS-----RDDTLK----------------------------------------------------------------- 366 (459)
T ss_pred eeec-----CCCcee-----------------------------------------------------------------
Confidence 7766 444444
Q ss_pred EEeCCCCceeEEEec---ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCc--ccccCCCCCCCCc
Q psy15549 395 LYDTQHASPFAFIAN---IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGE--ESKENDPTKGEPV 469 (621)
Q Consensus 395 iwd~~~~~~~~~~~~---~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 469 (621)
+.|+++.+....+.. .....++.+.|||++.|+++||.||.|+||++.++++...+...... ++.+.|.+.|..+
T Consensus 367 viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~L 446 (459)
T KOG0288|consen 367 VIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGL 446 (459)
T ss_pred eeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchh
Confidence 444444433332211 01224889999999999999999999999999999999888886655 8999999999999
Q ss_pred ccCCCcccHHHhc
Q psy15549 470 RSEDKPRSAEQAK 482 (621)
Q Consensus 470 ~s~~~~~~~~~w~ 482 (621)
.+++.++.+.+|.
T Consensus 447 lsadk~~~v~lW~ 459 (459)
T KOG0288|consen 447 LSADKQKAVTLWT 459 (459)
T ss_pred hcccCCcceEecC
Confidence 9999999888883
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=226.04 Aligned_cols=286 Identities=15% Similarity=0.228 Sum_probs=240.1
Q ss_pred ccccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccc--cccCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy15549 78 SRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDL--SRHQKAVNVVRFSPNGELLASGDDESTIIV 155 (621)
Q Consensus 78 ~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~i~~sp~g~~l~s~s~dg~i~v 155 (621)
-.|..-|.++.+|...+.+.+|+.++|+|||+...+.. .++..+ ......|.++.+.|||+.|++|+.-.++.|
T Consensus 416 L~HGEvVcAvtIS~~trhVyTgGkgcVKVWdis~pg~k----~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsi 491 (705)
T KOG0639|consen 416 LAHGEVVCAVTISNPTRHVYTGGKGCVKVWDISQPGNK----SPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSI 491 (705)
T ss_pred hccCcEEEEEEecCCcceeEecCCCeEEEeeccCCCCC----CccccccccCcccceeeeEecCCCceEEeccccceeee
Confidence 46888899999999999999999999999999876432 222222 224567999999999999999999999999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCc
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKK 235 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 235 (621)
||+...... +...+....-.+++++.+||.++.++++.||.|.|||+.+...++.|.+|..
T Consensus 492 WDLAapTpr-------------------ikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtD 552 (705)
T KOG0639|consen 492 WDLAAPTPR-------------------IKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 552 (705)
T ss_pred eeccCCCcc-------------------hhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCC
Confidence 999877643 1233444556788999999999999999999999999999999999999999
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
.+.|+.++++|..|.+|+-|.+||.||+++++.+.+. ...+.|.++.++|.+.+++
T Consensus 553 GascIdis~dGtklWTGGlDntvRcWDlregrqlqqh------------------------dF~SQIfSLg~cP~~dWla 608 (705)
T KOG0639|consen 553 GASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQH------------------------DFSSQIFSLGYCPTGDWLA 608 (705)
T ss_pred CceeEEecCCCceeecCCCccceeehhhhhhhhhhhh------------------------hhhhhheecccCCCcccee
Confidence 9999999999999999999999999999998866543 3356678999999999999
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
++- ..+.+.+.... ......+.-|...+.++.|.+ .|+++++.+.|+-+..
T Consensus 609 vGM-----ens~vevlh~s--------kp~kyqlhlheScVLSlKFa~----------------cGkwfvStGkDnlLna 659 (705)
T KOG0639|consen 609 VGM-----ENSNVEVLHTS--------KPEKYQLHLHESCVLSLKFAY----------------CGKWFVSTGKDNLLNA 659 (705)
T ss_pred eec-----ccCcEEEEecC--------CccceeecccccEEEEEEecc----------------cCceeeecCchhhhhh
Confidence 988 55555554433 334455667788888888887 7899999999999999
Q ss_pred EeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 396 YDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
|.+.-|..+.... ..+.|.++.+|.|.++|+||+.|..-.+|.+
T Consensus 660 wrtPyGasiFqsk--E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 660 WRTPYGASIFQSK--ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred ccCccccceeecc--ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 9999998887764 5789999999999999999999988888875
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-26 Score=234.95 Aligned_cols=203 Identities=12% Similarity=0.250 Sum_probs=157.2
Q ss_pred EEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC-CCEEEEEc-CCceEEEEecc
Q psy15549 34 VTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGD-DVGKEIWYLTE 111 (621)
Q Consensus 34 ~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd-g~~las~~-d~~v~iw~~~~ 111 (621)
++++.+....+|++..+.....+++|+...... ...+.+|.+.|.+++|+|+ +.+||+|+ |+.|+||++..
T Consensus 34 ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~-------v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t 106 (568)
T PTZ00420 34 IACSSGFVAVPWEVEGGGLIGAIRLENQMRKPP-------VIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPH 106 (568)
T ss_pred EeeCCCeEEEEEEcCCCCceeEEEeeecCCCce-------EEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCC
Confidence 444445555556665555555666998765432 3458899999999999996 78999988 88999999976
Q ss_pred Ccccccc-ceecccccccCCCeEEEEECCCCCE-EEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeec
Q psy15549 112 RESGIAN-VEFASDLSRHQKAVNVVRFSPNGEL-LASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR 189 (621)
Q Consensus 112 ~~~~~~~-~~~~~~~~~h~~~V~~i~~sp~g~~-l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (621)
....... ......+.+|...|.+++|+|++.. |++++.|++|+|||+.++... ..+
T Consensus 107 ~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~---------------------~~i- 164 (568)
T PTZ00420 107 NDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRA---------------------FQI- 164 (568)
T ss_pred CCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEE---------------------EEE-
Confidence 4321100 1233457889999999999998875 578999999999999988643 222
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEE-----EEEcCCCCEEEEEeCCC----cEEE
Q psy15549 190 GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQG-----VAWDPKNQYVATLSSDR----SLRT 260 (621)
Q Consensus 190 ~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~-----l~~sp~~~~l~s~~~dg----~i~i 260 (621)
.|...|.+++|+|+|.+|++++.|+.|+|||+++++.+..+.+|.+.+.+ ..|++++.+|++++.|+ .|+|
T Consensus 165 ~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkL 244 (568)
T PTZ00420 165 NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKL 244 (568)
T ss_pred ecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEE
Confidence 25578999999999999999999999999999999999999999876533 23568899999988774 7999
Q ss_pred EEccC
Q psy15549 261 YSIQS 265 (621)
Q Consensus 261 wd~~~ 265 (621)
||++.
T Consensus 245 WDlr~ 249 (568)
T PTZ00420 245 WDLKN 249 (568)
T ss_pred EECCC
Confidence 99985
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-25 Score=188.43 Aligned_cols=304 Identities=20% Similarity=0.284 Sum_probs=225.1
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccc-cc-ccceeeccccccccCcEEEEEE
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERE-SG-IANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~-~~-~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
....|.+++|+|.|. +.|+|+...+.++-..... -++..+. .. .....+...-+.|.+.|+|.+|
T Consensus 31 dsqairav~fhp~g~-----lyavgsnskt~ric~yp~l--------~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~w 97 (350)
T KOG0641|consen 31 DSQAIRAVAFHPAGG-----LYAVGSNSKTFRICAYPAL--------IDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAW 97 (350)
T ss_pred chhheeeEEecCCCc-----eEEeccCCceEEEEccccc--------cCcccccccccCCCeEEeeeccccCccEEEEEe
Confidence 455899999999998 9999999988883322111 1111111 00 1112233445778999999999
Q ss_pred ccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC----CCCEEEEEe-CCCcEEEEEccCCCC
Q psy15549 90 SPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP----NGELLASGD-DESTIIVWKQKTDQD 163 (621)
Q Consensus 90 spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp----~g~~l~s~s-~dg~i~vwd~~~~~~ 163 (621)
||+|.+||+|+ |..|++..++...... ......+.-|.+.|..++|-. .+.+|++++ .|..|.+-|...++.
T Consensus 98 s~~geliatgsndk~ik~l~fn~dt~~~--~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~ 175 (350)
T KOG0641|consen 98 SPCGELIATGSNDKTIKVLPFNADTCNA--TGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQG 175 (350)
T ss_pred cCccCeEEecCCCceEEEEecccccccc--cCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCc
Confidence 99999999999 7778887766543211 122334566999999999964 345777765 567788888888876
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc-------CCcc
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE-------HKKF 236 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-------~~~~ 236 (621)
. ..+.+|.+-|.++- +-+|-.+++|+.|.+|++||++-..++.++.. ....
T Consensus 176 ~---------------------~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessa 233 (350)
T KOG0641|consen 176 F---------------------HALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSA 233 (350)
T ss_pred c---------------------eeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccce
Confidence 4 66789999998773 33677999999999999999998888877632 2357
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
|.+++..|.|+.|++|-.|....+||++.++.++.+. ++...|+++.|||...|+++
T Consensus 234 vaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~-----------------------phsadir~vrfsp~a~yllt 290 (350)
T KOG0641|consen 234 VAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFH-----------------------PHSADIRCVRFSPGAHYLLT 290 (350)
T ss_pred eEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeC-----------------------CCccceeEEEeCCCceEEEE
Confidence 8999999999999999999999999999999998875 44556799999999999988
Q ss_pred ccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEE
Q psy15549 317 PSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLY 396 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw 396 (621)
++ +|..+++-++..-
T Consensus 291 ~s-----yd~~ikltdlqgd------------------------------------------------------------ 305 (350)
T KOG0641|consen 291 CS-----YDMKIKLTDLQGD------------------------------------------------------------ 305 (350)
T ss_pred ec-----ccceEEEeecccc------------------------------------------------------------
Confidence 88 6665555544310
Q ss_pred eCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 397 DTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 397 d~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
+...-++... ..|...+..+.|+|..-.+++.+.|.++.+|-+.
T Consensus 306 -la~el~~~vv-~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 306 -LAHELPIMVV-AEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred -hhhcCceEEE-EeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 0111122223 3488889999999999899999999999999864
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-27 Score=229.95 Aligned_cols=356 Identities=15% Similarity=0.209 Sum_probs=280.7
Q ss_pred ceeeecCC-CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 6 PEISWHNR-DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 6 ~~~~~~h~-~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
.-..+.|. +.|++++|..||. ..||+|+..|.+. +||++..+.... ....|.+.|
T Consensus 236 il~sFk~d~g~VtslSFrtDG~----p~las~~~~G~m~--------------~wDLe~kkl~~v------~~nah~~sv 291 (910)
T KOG1539|consen 236 ILMSFKQDWGRVTSLSFRTDGN----PLLASGRSNGDMA--------------FWDLEKKKLINV------TRNAHYGSV 291 (910)
T ss_pred EEEEEEccccceeEEEeccCCC----eeEEeccCCceEE--------------EEEcCCCeeeee------eeccccCCc
Confidence 34456674 8999999999998 6999999999999 999988766443 345899999
Q ss_pred EEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEEC-CCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 85 NVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFS-PNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 85 ~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s-p~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
....|-|....|++++ |+.+++|-.+.+.... ..++.-.||..+..+++|. .+|.++.+++.|++.+.+++....
T Consensus 292 ~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~p---R~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~ 368 (910)
T KOG1539|consen 292 TGATFLPGEPVLVTAGADNSLKVWVFDSGDGVP---RLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISES 368 (910)
T ss_pred ccceecCCCceEeeccCCCceeEEEeeCCCCcc---hheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHH
Confidence 9999999999999988 8888888887665432 4455567899999999998 588999999999999988764332
Q ss_pred CCCCCCC---------------CC--------cccccc----------------cccceeeee-----------eecCCC
Q psy15549 163 DLPEFPS---------------SN--------LDEENV----------------NKEHWIVTK-----------ILRGHL 192 (621)
Q Consensus 163 ~~~~~~~---------------~~--------~~~~~~----------------~~~~~~~~~-----------~~~~~~ 192 (621)
..+.+.. .. +..... ....|.... .+....
T Consensus 369 ~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~ 448 (910)
T KOG1539|consen 369 QSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDD 448 (910)
T ss_pred HhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccC
Confidence 2111100 00 000000 111222211 111233
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe---ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceee
Q psy15549 193 EDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL---TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVI 269 (621)
Q Consensus 193 ~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~---~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 269 (621)
..+++++.++-|++.+.|+..|.|-+|++.+|-....+ ..|.++|++++...-++.+++++.+|.+++||+.....+
T Consensus 449 ~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~ 528 (910)
T KOG1539|consen 449 INATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLK 528 (910)
T ss_pred cceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCccee
Confidence 67899999999999999999999999999999888888 589999999999998999999999999999999888766
Q ss_pred eecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceec
Q psy15549 270 SRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCL 349 (621)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~ 349 (621)
..+. ....+..+..+.....++.+. .|-.|.++|.... ..+..+
T Consensus 529 ~~l~------------------------l~~~~~~iv~hr~s~l~a~~~-----ddf~I~vvD~~t~-------kvvR~f 572 (910)
T KOG1539|consen 529 KSLR------------------------LGSSITGIVYHRVSDLLAIAL-----DDFSIRVVDVVTR-------KVVREF 572 (910)
T ss_pred eeec------------------------cCCCcceeeeeehhhhhhhhc-----CceeEEEEEchhh-------hhhHHh
Confidence 6553 234557788888888888887 7888888886542 334467
Q ss_pred CCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEE
Q psy15549 350 PSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIA 429 (621)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s 429 (621)
.+|...+++..|+| +|+++++++.|++|++||+.++.++-.+. -..+++++.|||+|.+|||
T Consensus 573 ~gh~nritd~~FS~----------------DgrWlisasmD~tIr~wDlpt~~lID~~~--vd~~~~sls~SPngD~LAT 634 (910)
T KOG1539|consen 573 WGHGNRITDMTFSP----------------DGRWLISASMDSTIRTWDLPTGTLIDGLL--VDSPCTSLSFSPNGDFLAT 634 (910)
T ss_pred hccccceeeeEeCC----------------CCcEEEEeecCCcEEEEeccCcceeeeEe--cCCcceeeEECCCCCEEEE
Confidence 78999999999988 89999999999999999999999988874 4678999999999999999
Q ss_pred EeCC-CcEEEEEec
Q psy15549 430 SSTD-GYCSIISFG 442 (621)
Q Consensus 430 ~s~d-g~i~iw~~~ 442 (621)
...| .-|++|.-.
T Consensus 635 ~Hvd~~gIylWsNk 648 (910)
T KOG1539|consen 635 VHVDQNGIYLWSNK 648 (910)
T ss_pred EEecCceEEEEEch
Confidence 9888 679999854
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-27 Score=215.16 Aligned_cols=302 Identities=15% Similarity=0.212 Sum_probs=227.4
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
.........++|++|.|+|..+ .|.+|+.|+.++ ||.++...... +..+.--..+|
T Consensus 205 DaNa~~ps~~~I~sv~FHp~~p-----lllvaG~d~~lr--------------ifqvDGk~N~~-----lqS~~l~~fPi 260 (514)
T KOG2055|consen 205 DANAAHPSHGGITSVQFHPTAP-----LLLVAGLDGTLR--------------IFQVDGKVNPK-----LQSIHLEKFPI 260 (514)
T ss_pred ccccCCcCcCCceEEEecCCCc-----eEEEecCCCcEE--------------EEEecCccChh-----heeeeeccCcc
Confidence 3344445567999999999998 999999999999 77776543321 23344456799
Q ss_pred EEEEEccCCC-EEEEEc-CCceEEEEeccCccccccceecccccccC-CCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 85 NVVRFSPNGE-LLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQ-KAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 85 ~~l~~spdg~-~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
.+.+|.|+|. .+++++ ..-...||+.... +..+..+.++. ..+..+..++++++|+..+..|.|.+....++
T Consensus 261 ~~a~f~p~G~~~i~~s~rrky~ysyDle~ak-----~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~ 335 (514)
T KOG2055|consen 261 QKAEFAPNGHSVIFTSGRRKYLYSYDLETAK-----VTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTK 335 (514)
T ss_pred ceeeecCCCceEEEecccceEEEEeeccccc-----cccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhh
Confidence 9999999999 677776 5567999998763 34455555555 35777889999999999999999999999999
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCc-ceEEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKK-FVQGV 240 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~v~~l 240 (621)
..+..+ .-.+.|..++|+.|++.|++++.+|.|.+||+++..+++.+....+ .-+++
T Consensus 336 eli~s~----------------------KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~ 393 (514)
T KOG2055|consen 336 ELITSF----------------------KIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSL 393 (514)
T ss_pred hhhhee----------------------eeccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeee
Confidence 876544 3457799999999999999999999999999999999988864322 23578
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 241 AWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 241 ~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
+.++++.|||+|+..|.|.|||..+...- ....|+....++...|++++|++|++.||.++..
T Consensus 394 ~~S~ng~ylA~GS~~GiVNIYd~~s~~~s-----------------~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~ 456 (514)
T KOG2055|consen 394 CISLNGSYLATGSDSGIVNIYDGNSCFAS-----------------TNPKPIKTVDNLTTAITSLQFNHDAQILAIASRV 456 (514)
T ss_pred eecCCCceEEeccCcceEEEeccchhhcc-----------------CCCCchhhhhhhheeeeeeeeCcchhhhhhhhhc
Confidence 88899999999999999999997653211 1223455566778889999999999999988832
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
.+..+++-. +.+
T Consensus 457 ---~knalrLVH-----------------------------------------------------------------vPS 468 (514)
T KOG2055|consen 457 ---KKNALRLVH-----------------------------------------------------------------VPS 468 (514)
T ss_pred ---cccceEEEe-----------------------------------------------------------------ccc
Confidence 222222222 221
Q ss_pred CceeEEEe--cccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 401 ASPFAFIA--NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 401 ~~~~~~~~--~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
......++ ...-+.|+||+|||.|.+||.|..+|.|.+|.+.
T Consensus 469 ~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 469 CTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred eeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 11111111 1123469999999999999999999999999874
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-27 Score=227.04 Aligned_cols=332 Identities=18% Similarity=0.278 Sum_probs=244.8
Q ss_pred eEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEe
Q psy15549 31 YRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYL 109 (621)
Q Consensus 31 ~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~ 109 (621)
++|.||+.||.|+ +|++........ -.....+..|.+.|+.++...+|+.|++++ |.+|++|+.
T Consensus 38 ryLfTgGRDg~i~--------------~W~~~~d~~~~s-~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~ 102 (735)
T KOG0308|consen 38 RYLFTGGRDGIIR--------------LWSVTQDSNEPS-TPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNA 102 (735)
T ss_pred ceEEecCCCceEE--------------EeccccccCCcc-cchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeec
Confidence 4899999999999 887765433211 113567899999999999999998888887 889999999
Q ss_pred ccCccccccceecccccccCCCeEEEEE-CCCCCEEEEEeCCCcEEEEEccCCCC--CCCCCCCCcccccccccceeeee
Q psy15549 110 TERESGIANVEFASDLSRHQKAVNVVRF-SPNGELLASGDDESTIIVWKQKTDQD--LPEFPSSNLDEENVNKEHWIVTK 186 (621)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~h~~~V~~i~~-sp~g~~l~s~s~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 186 (621)
..+.. -+...+..|.+.|.|+++ .++..++|+||.|+.|.+||+.++.. +..+.. ....
T Consensus 103 ~~~~~-----~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~-------------~t~~ 164 (735)
T KOG0308|consen 103 HKDNT-----FCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNN-------------VTVN 164 (735)
T ss_pred ccCcc-----hhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccc-------------cccc
Confidence 87641 456778899999999999 77888999999999999999998843 222110 0112
Q ss_pred eec-CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q psy15549 187 ILR-GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 187 ~~~-~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~ 265 (621)
.+. ++...|++++.++.|..|++|+..+.+++||.++++.+..+++|...|..+..++||..++++++||+|++||+..
T Consensus 165 sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgq 244 (735)
T KOG0308|consen 165 SLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQ 244 (735)
T ss_pred cCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccc
Confidence 233 8899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeee---eccc
Q psy15549 266 KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFT---RACL 342 (621)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~---~~~~ 342 (621)
.+++.++..| +..+.++..+|+=.++++|+ .|+.+..-++..... .-..
T Consensus 245 QrCl~T~~vH-----------------------~e~VWaL~~~~sf~~vYsG~-----rd~~i~~Tdl~n~~~~tlick~ 296 (735)
T KOG0308|consen 245 QRCLATYIVH-----------------------KEGVWALQSSPSFTHVYSGG-----RDGNIYRTDLRNPAKSTLICKE 296 (735)
T ss_pred cceeeeEEec-----------------------cCceEEEeeCCCcceEEecC-----CCCcEEecccCCchhheEeecC
Confidence 9998887544 33468899999999999998 788777666553210 0011
Q ss_pred CCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC---------------------
Q psy15549 343 NKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA--------------------- 401 (621)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--------------------- 401 (621)
..|+..+..+ ..+..+-++..|+.|.-|-..-.
T Consensus 297 daPv~~l~~~--------------------------~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~ 350 (735)
T KOG0308|consen 297 DAPVLKLHLH--------------------------EHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSC 350 (735)
T ss_pred CCchhhhhhc--------------------------cccCCceeeeccccceecCCccccccccCCCCCcccccCCCccc
Confidence 1111111111 01112233344444444432211
Q ss_pred ----ceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccC
Q psy15549 402 ----SPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYV 451 (621)
Q Consensus 402 ----~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~ 451 (621)
.+-..+.++ ..|...+.--|.++++|=...|.+.+||+-.......+.
T Consensus 351 ~~~~tp~~vi~Gg--~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~~~~~~d~g 402 (735)
T KOG0308|consen 351 DLTNTPDSVIPGG--AAIKKHAMLNDKRHVLTKDAKGNVALWDILACVKVEDFG 402 (735)
T ss_pred cccCCCceeccCc--hhhhhhhhhcCcceEeeecCCCCEEEEEeeeeeehhhcc
Confidence 111222221 245555666788999999999999999998776665554
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-26 Score=223.52 Aligned_cols=376 Identities=18% Similarity=0.212 Sum_probs=268.7
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
..++.+|.++|+++.|+|.+. .|.+++.|.++. +|...+........--+..+.+..+.-.
T Consensus 260 eall~GHeDWV~sv~W~p~~~-----~LLSASaDksmi--------------iW~pd~~tGiWv~~vRlGe~gg~a~GF~ 320 (764)
T KOG1063|consen 260 EALLMGHEDWVYSVWWHPEGL-----DLLSASADKSMI--------------IWKPDENTGIWVDVVRLGEVGGSAGGFW 320 (764)
T ss_pred hhhhcCcccceEEEEEccchh-----hheecccCcceE--------------EEecCCccceEEEEEEeeccccccccee
Confidence 345679999999999999998 999999999999 5554443222221112233456667889
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC--
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ-- 162 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~-- 162 (621)
...|+|++..+++-+ .|+.++|..... ........+.||.+.|..++|+|.|.+|++.+.|.+-|++-.-..+
T Consensus 321 g~lw~~n~~~ii~~g~~Gg~hlWkt~d~----~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~ 396 (764)
T KOG1063|consen 321 GGLWSPNSNVIIAHGRTGGFHLWKTKDK----TFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQE 396 (764)
T ss_pred eEEEcCCCCEEEEecccCcEEEEeccCc----cceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccc
Confidence 999999999888766 888999993222 1335566678999999999999999999999999998886432000
Q ss_pred ------------------CCC---------------CCCCC-----------------------------------Cccc
Q psy15549 163 ------------------DLP---------------EFPSS-----------------------------------NLDE 174 (621)
Q Consensus 163 ------------------~~~---------------~~~~~-----------------------------------~~~~ 174 (621)
.+. .|..+ ....
T Consensus 397 wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~ 476 (764)
T KOG1063|consen 397 WHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFP 476 (764)
T ss_pred eeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcc
Confidence 000 00000 0000
Q ss_pred -------------------------------ccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-----CeEEE
Q psy15549 175 -------------------------------ENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD-----NTAIM 218 (621)
Q Consensus 175 -------------------------------~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d-----g~i~v 218 (621)
.......|.....+.||.-.|++++.+|+++++|+++.. ..|++
T Consensus 477 ~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~l 556 (764)
T KOG1063|consen 477 GETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRL 556 (764)
T ss_pred cccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEE
Confidence 000113455556788999999999999999999998864 46999
Q ss_pred EECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCc
Q psy15549 219 WDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298 (621)
Q Consensus 219 wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (621)
|+..+...++.+.+|.-.|+.++|||||++|++.+.|+++.+|........ .+ ..-....|
T Consensus 557 w~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~-e~------------------~fa~~k~H 617 (764)
T KOG1063|consen 557 WNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKD-EF------------------RFACLKAH 617 (764)
T ss_pred EeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccch-hh------------------hhcccccc
Confidence 999998888899999999999999999999999999999999987433211 11 01124456
Q ss_pred ccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCcc
Q psy15549 299 KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFK 378 (621)
Q Consensus 299 ~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (621)
.--|.++.|+|++.++++++ .|.++++|......... ............++++.+.|.....
T Consensus 618 tRIIWdcsW~pde~~FaTaS-----RDK~VkVW~~~~~~d~~---i~~~a~~~~~~aVTAv~~~~~~~~e---------- 679 (764)
T KOG1063|consen 618 TRIIWDCSWSPDEKYFATAS-----RDKKVKVWEEPDLRDKY---ISRFACLKFSLAVTAVAYLPVDHNE---------- 679 (764)
T ss_pred ceEEEEcccCcccceeEEec-----CCceEEEEeccCchhhh---hhhhchhccCCceeeEEeecccccc----------
Confidence 66789999999999999999 99999999876542111 1111344566778888887743211
Q ss_pred CCCcEEEEEEcCCcEEEEeCCCCce---------eEEE--ecccccceEEEEEcCC----------CCeEEEEeCCCcEE
Q psy15549 379 LPYRIVIAVATENNILLYDTQHASP---------FAFI--ANIHYTKLTDITWSSD----------GKVLIASSTDGYCS 437 (621)
Q Consensus 379 ~~~~~l~~~~~dg~i~iwd~~~~~~---------~~~~--~~~h~~~v~~~~~spd----------g~~l~s~s~dg~i~ 437 (621)
....+++|-..|.|.+|....-.. ...+ ..+|...|+.++|+|. ...|++|+.|..++
T Consensus 680 -~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~aV~rl~w~p~~~~~~~~~~~~l~la~~g~D~~vr 758 (764)
T KOG1063|consen 680 -KGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPDSAVNRLLWRPTCSDDWVEDKEWLNLAVGGDDESVR 758 (764)
T ss_pred -ccceEEEEecccEEEEEecccccccccceeeeeccccccccChHHhhheeEeccccccccccccceeEEeeecccceeE
Confidence 223567777899999999651110 0001 1257788999999975 23579999999999
Q ss_pred EEEec
Q psy15549 438 IISFG 442 (621)
Q Consensus 438 iw~~~ 442 (621)
++++.
T Consensus 759 i~nv~ 763 (764)
T KOG1063|consen 759 IFNVD 763 (764)
T ss_pred Eeecc
Confidence 99875
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-27 Score=214.01 Aligned_cols=279 Identities=16% Similarity=0.228 Sum_probs=235.0
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
..+.++...|....+++|+ |..+.++|...+ +.+..+.||...|+.+.|+|+...+++++.|..|+||....
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~-------q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~ 292 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSN-------QILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPL 292 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchh-------hhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccc
Confidence 4688888888878888888 668999999887 77889999999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC--CcceE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH--KKFVQ 238 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~~v~ 238 (621)
.... .....|..+|+.+..+|.|.||++++.|+...+.|++++..+...... .-.++
T Consensus 293 ~s~~---------------------~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~t 351 (506)
T KOG0289|consen 293 SSEP---------------------TSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYT 351 (506)
T ss_pred ccCc---------------------cccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeE
Confidence 7643 456789999999999999999999999999999999999988776542 34589
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
+.+|+|||..|.+|..||.|+|||+.++..+..+. .|.++|..++|+.+|-||++++
T Consensus 352 s~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fp-----------------------ght~~vk~i~FsENGY~Lat~a 408 (506)
T KOG0289|consen 352 SAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFP-----------------------GHTGPVKAISFSENGYWLATAA 408 (506)
T ss_pred EeeEcCCceEEeccCCCceEEEEEcCCccccccCC-----------------------CCCCceeEEEeccCceEEEEEe
Confidence 99999999999999999999999999988776664 3456678999999998888766
Q ss_pred ccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeC
Q psy15549 319 GCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDT 398 (621)
Q Consensus 319 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 398 (621)
+|+.|++||+
T Consensus 409 ----------------------------------------------------------------------dd~~V~lwDL 418 (506)
T KOG0289|consen 409 ----------------------------------------------------------------------DDGSVKLWDL 418 (506)
T ss_pred ----------------------------------------------------------------------cCCeEEEEEe
Confidence 6777888888
Q ss_pred CCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec--CCcCCcccCCCCCcccccCCCCCCCCcccCCCcc
Q psy15549 399 QHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG--DNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPR 476 (621)
Q Consensus 399 ~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 476 (621)
+..+....+.......|.++.|.+.|++|+.++.|=.|++++-. +...+..+..+++..+.+.|......+++++.+.
T Consensus 419 RKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~ 498 (506)
T KOG0289|consen 419 RKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDA 498 (506)
T ss_pred hhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchh
Confidence 88877777755455579999999999999999877555555432 5567777888888889999988888898888887
Q ss_pred cHHHh
Q psy15549 477 SAEQA 481 (621)
Q Consensus 477 ~~~~w 481 (621)
.+++.
T Consensus 499 ~l~~~ 503 (506)
T KOG0289|consen 499 ILRLY 503 (506)
T ss_pred heEEe
Confidence 65543
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-26 Score=211.94 Aligned_cols=398 Identities=12% Similarity=0.138 Sum_probs=277.7
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
.+...+|.+.|-|++++||.. ++++|-.-|.- .......++|||..+-.... .+......|.
T Consensus 97 Qr~y~GH~ddikc~~vHPdri-----~vatGQ~ag~~------g~~~~phvriWdsv~L~TL~-------V~g~f~~GV~ 158 (626)
T KOG2106|consen 97 QRHYLGHNDDIKCMAVHPDRI-----RVATGQGAGTS------GRPLQPHVRIWDSVTLSTLH-------VIGFFDRGVT 158 (626)
T ss_pred cccccCCCCceEEEeecCCce-----eeccCcccccC------CCcCCCeeeecccccceeee-------eeccccccce
Confidence 456788999999999999997 88888666531 00011222388865443322 2445677899
Q ss_pred EEEEcc--CCCEEEEEc---CCceEEEEeccCccccccceecccccccCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcc
Q psy15549 86 VVRFSP--NGELLASGD---DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDESTIIVWKQK 159 (621)
Q Consensus 86 ~l~~sp--dg~~las~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg~i~vwd~~ 159 (621)
|++||+ .|.+|.... +.-+.+|+...+ ............|....|+|.+ +++++++ .|.+.+|+.+
T Consensus 159 ~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~-------~~~~~vk~sne~v~~a~FHPtd~nliit~G-k~H~~Fw~~~ 230 (626)
T KOG2106|consen 159 CVAFSKINGGSLLCAVDDSNPHMLSVWDWQKK-------AKLGPVKTSNEVVFLATFHPTDPNLIITCG-KGHLYFWTLR 230 (626)
T ss_pred eeeecccCCCceEEEecCCCccccchhhchhh-------hccCcceeccceEEEEEeccCCCcEEEEeC-CceEEEEEcc
Confidence 999998 456666655 334689999876 3444555567789999999955 5666665 5789999998
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecC-CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceE
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRG-HLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ 238 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 238 (621)
.+....+. ..+.. ....|.|++|.++|. +++|..+|.|.||+..+.+..+....|.+.|.
T Consensus 231 ~~~l~k~~------------------~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~ 291 (626)
T KOG2106|consen 231 GGSLVKRQ------------------GIFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVF 291 (626)
T ss_pred CCceEEEe------------------eccccccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeecCCceE
Confidence 88654321 22222 236799999999985 78999999999999988887777779999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCC--CCC---CCccc-cc----------cccccc--cccCCccc
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSK--LPV---DSSHE-LF----------DKVVPL--FHDDTMKS 300 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~---~~~~~-~~----------~~~~~~--~~~~~~~~ 300 (621)
+++.-.+|..|- |+.|..|..|| ..-+.++....+. .++ ..+.. +. .....- .....+..
T Consensus 292 ~L~~lr~GtllS-GgKDRki~~Wd-~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~d 369 (626)
T KOG2106|consen 292 SLCMLRDGTLLS-GGKDRKIILWD-DNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGD 369 (626)
T ss_pred EEEEecCccEee-cCccceEEecc-ccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEeccc
Confidence 999999998554 99999999999 3322222222111 000 00000 00 000000 01112334
Q ss_pred ceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCC
Q psy15549 301 FFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLP 380 (621)
Q Consensus 301 ~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (621)
....++.+|+...+++++ .|+.+++|+-....- .........++.|.| .
T Consensus 370 elwgla~hps~~q~~T~g-----qdk~v~lW~~~k~~w----------t~~~~d~~~~~~fhp----------------s 418 (626)
T KOG2106|consen 370 ELWGLATHPSKNQLLTCG-----QDKHVRLWNDHKLEW----------TKIIEDPAECADFHP----------------S 418 (626)
T ss_pred ceeeEEcCCChhheeecc-----CcceEEEccCCceeE----------EEEecCceeEeeccC----------------c
Confidence 567899999999999999 999999998322211 112234455666666 4
Q ss_pred CcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc-CCcccCC-CCCccc
Q psy15549 381 YRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE-IGIPYVP-PSGEES 458 (621)
Q Consensus 381 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~-~~~~~~~-~~~~~~ 458 (621)
+ .+++|...|...+.|.++...+..- . ...++++++|+|+|.+||.|+.|+.|+||.+..+. ....+.. +...++
T Consensus 419 g-~va~Gt~~G~w~V~d~e~~~lv~~~-~-d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~it 495 (626)
T KOG2106|consen 419 G-VVAVGTATGRWFVLDTETQDLVTIH-T-DNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPIT 495 (626)
T ss_pred c-eEEEeeccceEEEEecccceeEEEE-e-cCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeE
Confidence 4 7888999999999999995544433 3 37899999999999999999999999999998543 3333322 336788
Q ss_pred ccCCCCCCCCcccCCCcccHHHhccc
Q psy15549 459 KENDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 459 ~~~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
.+.|++|+..+.+.+.|-.+..|...
T Consensus 496 hLDwS~Ds~~~~~~S~d~eiLyW~~~ 521 (626)
T KOG2106|consen 496 HLDWSSDSQFLVSNSGDYEILYWKPS 521 (626)
T ss_pred EeeecCCCceEEeccCceEEEEEccc
Confidence 88999999999999999999999543
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=202.26 Aligned_cols=277 Identities=17% Similarity=0.266 Sum_probs=212.7
Q ss_pred ccCcEEEEEEcc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Q psy15549 80 HQKAVNVVRFSP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWK 157 (621)
Q Consensus 80 h~~~V~~l~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd 157 (621)
-.+.|.+|+||| ...++++++ |+.|++|++...+. ........|.++|.+++|+.+|..+++|+.|+.+++||
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~-----~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wD 100 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQ-----LVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWD 100 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCc-----ccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEE
Confidence 457899999999 445555666 99999999987532 22255667999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCC--EEEEEeCCCeEEEEECCCCcEEEEeccCCc
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST--HLISGSVDNTAIMWDVHKGKNLGILTEHKK 235 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~--~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 235 (621)
+.+++. .....|.++|.++.|-+... .|+||+.|.+|+.||.+...++.++.. ..
T Consensus 101 L~S~Q~----------------------~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~L-Pe 157 (347)
T KOG0647|consen 101 LASGQV----------------------SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQL-PE 157 (347)
T ss_pred ccCCCe----------------------eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeec-cc
Confidence 999964 56678999999999988655 899999999999999999998888753 34
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
.+.++..- -..++++..++.|.+|+++.+....... ..+++-.+++++..+|....+
T Consensus 158 RvYa~Dv~--~pm~vVata~r~i~vynL~n~~te~k~~---------------------~SpLk~Q~R~va~f~d~~~~a 214 (347)
T KOG0647|consen 158 RVYAADVL--YPMAVVATAERHIAVYNLENPPTEFKRI---------------------ESPLKWQTRCVACFQDKDGFA 214 (347)
T ss_pred eeeehhcc--CceeEEEecCCcEEEEEcCCCcchhhhh---------------------cCcccceeeEEEEEecCCceE
Confidence 45555433 4568888899999999997765332221 123455679999999998888
Q ss_pred eccccccCCCCCCcceeeeee-----eeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 316 APSGCLENSDSTRKPISVTHV-----FTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
.++ ..|.+.+..+... +..++...... ....-..+..+.|+| -.+.|+++++|
T Consensus 215 lGs-----iEGrv~iq~id~~~~~~nFtFkCHR~~~~-~~~~VYaVNsi~FhP----------------~hgtlvTaGsD 272 (347)
T KOG0647|consen 215 LGS-----IEGRVAIQYIDDPNPKDNFTFKCHRSTNS-VNDDVYAVNSIAFHP----------------VHGTLVTAGSD 272 (347)
T ss_pred eee-----ecceEEEEecCCCCccCceeEEEeccCCC-CCCceEEecceEeec----------------ccceEEEecCC
Confidence 888 7777777665542 22222211111 112235677788887 34889999999
Q ss_pred CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEE
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIAS 430 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~ 430 (621)
|++.+||-.....+.... .|..+|++.+|+.+|.++|.+
T Consensus 273 Gtf~FWDkdar~kLk~s~-~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 273 GTFSFWDKDARTKLKTSE-THPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred ceEEEecchhhhhhhccC-cCCCccceeEecCCCCEEEEE
Confidence 999999988887777764 489999999999999998866
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=202.12 Aligned_cols=257 Identities=23% Similarity=0.364 Sum_probs=208.1
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
..|-..|++.|..+...=.|+ +|||++.|++|+ |+.+..... ..+..+|.||.++|.
T Consensus 4 q~idt~H~D~IHda~lDyygk-----rlATcsSD~tVk--------------If~v~~n~~----s~ll~~L~Gh~GPVw 60 (299)
T KOG1332|consen 4 QTIDTQHEDMIHDAQLDYYGK-----RLATCSSDGTVK--------------IFEVRNNGQ----SKLLAELTGHSGPVW 60 (299)
T ss_pred eehhhhhhhhhhHhhhhhhcc-----eeeeecCCccEE--------------EEEEcCCCC----ceeeeEecCCCCCee
Confidence 356677999999999998998 999999999999 887776553 234678999999999
Q ss_pred EEEEcc--CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC--CCCEEEEEeCCCcEEEEEccC
Q psy15549 86 VVRFSP--NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--NGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 86 ~l~~sp--dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp--~g~~l~s~s~dg~i~vwd~~~ 160 (621)
.++|.. -|.+||+++ |+.|.||.-..+ .+........|...|++++|.| .|-.|++++.||.|.|.+.++
T Consensus 61 qv~wahPk~G~iLAScsYDgkVIiWke~~g-----~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~ 135 (299)
T KOG1332|consen 61 KVAWAHPKFGTILASCSYDGKVIIWKEENG-----RWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDS 135 (299)
T ss_pred EEeecccccCcEeeEeecCceEEEEecCCC-----chhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcC
Confidence 999976 899999999 999999998877 3466777888999999999999 456899999999999999887
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC---C-----------CEEEEEeCCCeEEEEECCCCc-
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT---S-----------THLISGSVDNTAIMWDVHKGK- 225 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd---~-----------~~l~s~~~dg~i~vwd~~~~~- 225 (621)
... |...+....|.-.|++++|.|. | +.|++|+.|..|+||+..+++
T Consensus 136 ~g~------------------w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w 197 (299)
T KOG1332|consen 136 SGG------------------WTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSW 197 (299)
T ss_pred CCC------------------ccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcch
Confidence 622 2223566789999999999995 4 579999999999999987753
Q ss_pred -EEEEeccCCcceEEEEEcCCC----CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCccc
Q psy15549 226 -NLGILTEHKKFVQGVAWDPKN----QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKS 300 (621)
Q Consensus 226 -~~~~~~~~~~~v~~l~~sp~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (621)
.-.++.+|.+.|+.++|.|.- .+|++++.||++.||..+........ -.+.....
T Consensus 198 ~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~--------------------tll~~f~~ 257 (299)
T KOG1332|consen 198 KLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKK--------------------TLLEEFPD 257 (299)
T ss_pred hhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccc--------------------cccccCCc
Confidence 334588999999999999964 56999999999999987632111000 01122455
Q ss_pred ceeeeeecCCCCeEEeccccccCCCCCCcceee
Q psy15549 301 FFRRLTFSPDGQLLIAPSGCLENSDSTRKPISV 333 (621)
Q Consensus 301 ~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~ 333 (621)
.+.++.||..|+.|++++ .|..+.+|.-
T Consensus 258 ~~w~vSWS~sGn~LaVs~-----GdNkvtlwke 285 (299)
T KOG1332|consen 258 VVWRVSWSLSGNILAVSG-----GDNKVTLWKE 285 (299)
T ss_pred ceEEEEEeccccEEEEec-----CCcEEEEEEe
Confidence 679999999999999998 6888888864
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-26 Score=192.86 Aligned_cols=256 Identities=19% Similarity=0.291 Sum_probs=199.7
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
..-||++.|+|.+|||+|+ +||+|+.|.+|+ +.-++......... --++.-|.+.|..+
T Consensus 84 r~khhkgsiyc~~ws~~ge-----liatgsndk~ik--------------~l~fn~dt~~~~g~--dle~nmhdgtirdl 142 (350)
T KOG0641|consen 84 RNKHHKGSIYCTAWSPCGE-----LIATGSNDKTIK--------------VLPFNADTCNATGH--DLEFNMHDGTIRDL 142 (350)
T ss_pred eccccCccEEEEEecCccC-----eEEecCCCceEE--------------EEecccccccccCc--ceeeeecCCceeee
Confidence 4568999999999999999 999999999999 44333222211111 12367799999999
Q ss_pred EEcc----CCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 88 RFSP----NGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 88 ~~sp----dg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
+|-. .|.+|++++ |..|.+-|...+ +..+.+.+|++-|.++ ++-+|-.+++|+.|.+|++||++-.
T Consensus 143 ~fld~~~s~~~il~s~gagdc~iy~tdc~~g-------~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~ 214 (350)
T KOG0641|consen 143 AFLDDPESGGAILASAGAGDCKIYITDCGRG-------QGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVN 214 (350)
T ss_pred EEecCCCcCceEEEecCCCcceEEEeecCCC-------CcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeecc
Confidence 9964 367888887 555555566555 6688899999999876 3346889999999999999999988
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecC---CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRG---HLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ 238 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 238 (621)
.++..+. ..+.+ ..+.|.+++..|.|++|++|-.|....+||++.++.++.+..|...|.
T Consensus 215 ~~v~~l~-----------------~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir 277 (350)
T KOG0641|consen 215 SCVNTLD-----------------NDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIR 277 (350)
T ss_pred ceeeecc-----------------CcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCcccee
Confidence 7764441 11111 236799999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
|+.|+|...|+++++.|..|++-|+.. .+..++ ++.....++..+..+.|+|..-.+++.+
T Consensus 278 ~vrfsp~a~yllt~syd~~ikltdlqg-dla~el------------------~~~vv~ehkdk~i~~rwh~~d~sfisss 338 (350)
T KOG0641|consen 278 CVRFSPGAHYLLTCSYDMKIKLTDLQG-DLAHEL------------------PIMVVAEHKDKAIQCRWHPQDFSFISSS 338 (350)
T ss_pred EEEeCCCceEEEEecccceEEEeeccc-chhhcC------------------ceEEEEeccCceEEEEecCccceeeecc
Confidence 999999999999999999999999854 222222 1222334566677899999998888888
Q ss_pred ccccCCCCCCcceee
Q psy15549 319 GCLENSDSTRKPISV 333 (621)
Q Consensus 319 ~~~~~~d~~i~~~~~ 333 (621)
.|.+..+|-+
T Consensus 339 -----adkt~tlwa~ 348 (350)
T KOG0641|consen 339 -----ADKTATLWAL 348 (350)
T ss_pred -----CcceEEEecc
Confidence 7888888864
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-25 Score=215.69 Aligned_cols=252 Identities=17% Similarity=0.265 Sum_probs=197.9
Q ss_pred ccccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccc-
Q psy15549 2 KCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRH- 80 (621)
Q Consensus 2 ~~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h- 80 (621)
+.-.+++.---..+|+||||+.+.. .||.+-.+|.|. ||++...-... ..+.++
T Consensus 14 ~vhrcrf~d~~Ps~I~slA~s~kS~-----~lAvsRt~g~IE--------------iwN~~~~w~~~------~vi~g~~ 68 (691)
T KOG2048|consen 14 QVHRCRFVDYKPSEIVSLAYSHKSN-----QLAVSRTDGNIE--------------IWNLSNNWFLE------PVIHGPE 68 (691)
T ss_pred EEEEEEEEeeeccceEEEEEeccCC-----ceeeeccCCcEE--------------EEccCCCceee------EEEecCC
Confidence 3344455555567999999999998 999999999999 99888753322 234444
Q ss_pred cCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 81 QKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
...|-+++|++.++++-++.++.|.-||+... +....+....+.|++++.+|.+..++.|+.||.+..++...
T Consensus 69 drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~l-------k~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p 141 (691)
T KOG2048|consen 69 DRSIESLAWAEGGRLFSSGLSGSITEWDLHTL-------KQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGP 141 (691)
T ss_pred CCceeeEEEccCCeEEeecCCceEEEEecccC-------ceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCC
Confidence 56899999998888877788999999999987 66666777788999999999999999999999777777666
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec-----c---
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT-----E--- 232 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~-----~--- 232 (621)
+... ....+....+.|.+++|+|++..|+.|+.||.|++||..++..++... .
T Consensus 142 ~~I~-------------------~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~ 202 (691)
T KOG2048|consen 142 DKIT-------------------YKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKR 202 (691)
T ss_pred ceEE-------------------EEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccC
Confidence 5432 235566677999999999999999999999999999999998776321 1
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 312 (621)
...-|.++.|-.+ ..|++|.+.|+|++||...+.+++.+..+ ...|.+++..+++.
T Consensus 203 ~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~gTLiqS~~~h-----------------------~adVl~Lav~~~~d 258 (691)
T KOG2048|consen 203 EPTIVWSVLFLRD-STIASGDSAGTVTFWDSIFGTLIQSHSCH-----------------------DADVLALAVADNED 258 (691)
T ss_pred CceEEEEEEEeec-CcEEEecCCceEEEEcccCcchhhhhhhh-----------------------hcceeEEEEcCCCC
Confidence 2234677777754 46889999999999999999988776533 44568899999988
Q ss_pred eEEeccccccCCCCCCcceee
Q psy15549 313 LLIAPSGCLENSDSTRKPISV 333 (621)
Q Consensus 313 ~l~~~s~~~~~~d~~i~~~~~ 333 (621)
++++++ .|+.+..+..
T Consensus 259 ~vfsaG-----vd~~ii~~~~ 274 (691)
T KOG2048|consen 259 RVFSAG-----VDPKIIQYSL 274 (691)
T ss_pred eEEEcc-----CCCceEEEEe
Confidence 888887 6666554443
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.5e-27 Score=235.97 Aligned_cols=274 Identities=21% Similarity=0.274 Sum_probs=228.8
Q ss_pred ccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceeccc-ccccCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Q psy15549 80 HQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASD-LSRHQKAVNVVRFSPNGELLASGDDESTIIVWK 157 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd 157 (621)
+...+.+..|. ..++++++ +..+++|+...+ ..+.. +.+|.+.|++++|..-+.+|++|+.|.++++||
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~-------~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd 277 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNG-------YLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWD 277 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccc-------eEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEe
Confidence 56678888888 45666665 778889999887 44555 999999999999987788999999999999999
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcce
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFV 237 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v 237 (621)
..++.+. ..+.+|.+.|.++...+ .++++|+.|.+|++|++.++..+..+.+|.++|
T Consensus 278 ~~sg~C~---------------------~~l~gh~stv~~~~~~~--~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V 334 (537)
T KOG0274|consen 278 CSTGECT---------------------HSLQGHTSSVRCLTIDP--FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPV 334 (537)
T ss_pred cCCCcEE---------------------EEecCCCceEEEEEccC--ceEeeccCCceEEEEeccCcceEEEeccccccE
Confidence 9999975 77789999999998864 478889999999999999999999999999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
.++..+ +.++++|+.|++|++||+.+++++..+.+| ...|.++.+.+.
T Consensus 335 ~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH-----------------------~~~V~sl~~~~~------- 382 (537)
T KOG0274|consen 335 NCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGH-----------------------TGRVYSLIVDSE------- 382 (537)
T ss_pred EEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCC-----------------------cceEEEEEecCc-------
Confidence 999998 899999999999999999999998887644 334455544332
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEe
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYD 397 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 397 (621)
..++.|+.|+.|++||
T Consensus 383 ----------------------------------------------------------------~~~~Sgs~D~~IkvWd 398 (537)
T KOG0274|consen 383 ----------------------------------------------------------------NRLLSGSLDTTIKVWD 398 (537)
T ss_pred ----------------------------------------------------------------ceEEeeeeccceEeec
Confidence 2355566889999999
Q ss_pred CCCC-ceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCC-CCCcccccCCCCCCCCcccCCCc
Q psy15549 398 TQHA-SPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP-PSGEESKENDPTKGEPVRSEDKP 475 (621)
Q Consensus 398 ~~~~-~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~ 475 (621)
+.+. +++..+ .+|.+-|.++.+ .+++|++++.||+|++||..++++.+.+.. +...+..+... ...++....+
T Consensus 399 l~~~~~c~~tl-~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~ 473 (537)
T KOG0274|consen 399 LRTKRKCIHTL-QGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDD 473 (537)
T ss_pred CCchhhhhhhh-cCCccccccccc--ccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecC
Confidence 9999 888887 468888866665 677999999999999999999999999998 45556555554 4678889999
Q ss_pred ccHHHhcccCc
Q psy15549 476 RSAEQAKGEGK 486 (621)
Q Consensus 476 ~~~~~w~~~~~ 486 (621)
+.+++|+++..
T Consensus 474 ~~~~l~dl~~~ 484 (537)
T KOG0274|consen 474 GSVKLWDLRSG 484 (537)
T ss_pred CeeEEEecccC
Confidence 99999986644
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-27 Score=204.97 Aligned_cols=312 Identities=17% Similarity=0.244 Sum_probs=240.9
Q ss_pred eeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC
Q psy15549 71 VEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD 149 (621)
Q Consensus 71 ~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~ 149 (621)
..+.+.+.||.+.|..++......++.+++ |.+-+||.++.+ .++..+.+|.+.|++|+|++.+.++++++.
T Consensus 138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg-------~CL~~Y~GH~GSVNsikfh~s~~L~lTaSG 210 (481)
T KOG0300|consen 138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESG-------ACLATYTGHTGSVNSIKFHNSGLLLLTASG 210 (481)
T ss_pred EeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccc-------cceeeecccccceeeEEeccccceEEEccC
Confidence 345677999999999999988888888888 889999999998 888999999999999999999999999999
Q ss_pred CCcEEEEEccCCCCC------CCCCCCCc-------------ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE
Q psy15549 150 ESTIIVWKQKTDQDL------PEFPSSNL-------------DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG 210 (621)
Q Consensus 150 dg~i~vwd~~~~~~~------~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~ 210 (621)
|++.+||...-.-.+ ...+.... ...........+...+.+|.+.|.+..|-..|+.++++
T Consensus 211 D~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTa 290 (481)
T KOG0300|consen 211 DETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTA 290 (481)
T ss_pred CcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeee
Confidence 999999973322111 11111000 00011112334567788999999999999999999999
Q ss_pred eCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccc
Q psy15549 211 SVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVV 290 (621)
Q Consensus 211 ~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (621)
+.|.+..+||+++++.+..+.+|....+.++-+|..+++++.+.|.+.++||++.. +..
T Consensus 291 SWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRea--I~s------------------- 349 (481)
T KOG0300|consen 291 SWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREA--IQS------------------- 349 (481)
T ss_pred eccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhh--cce-------------------
Confidence 99999999999999999999999999999999999999999999999999999742 111
Q ss_pred cccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCC
Q psy15549 291 PLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKP 370 (621)
Q Consensus 291 ~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (621)
++ .+.+|...+.++.|.
T Consensus 350 --------------V~-----------------------------------------VFQGHtdtVTS~vF~-------- 366 (481)
T KOG0300|consen 350 --------------VA-----------------------------------------VFQGHTDTVTSVVFN-------- 366 (481)
T ss_pred --------------ee-----------------------------------------eecccccceeEEEEe--------
Confidence 10 122333344444333
Q ss_pred CCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc-eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcc
Q psy15549 371 SDDKPLFKLPYRIVIAVATENNILLYDTQHAS-PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIP 449 (621)
Q Consensus 371 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~ 449 (621)
.+..+++++.|.+|++||+++.. ++.++. -.++++.++.+..+..|+.--++..|++||++...+.+.
T Consensus 367 ---------~dd~vVSgSDDrTvKvWdLrNMRsplATIR--tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRl 435 (481)
T KOG0300|consen 367 ---------TDDRVVSGSDDRTVKVWDLRNMRSPLATIR--TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARL 435 (481)
T ss_pred ---------cCCceeecCCCceEEEeeeccccCcceeee--cCCccceeEeecCCceEEeccCCceEEEEecCCCccccC
Confidence 23557778889999999998864 667764 467899999999888899888899999999986655433
Q ss_pred c----CCCCCcccccCCCCCC--CCcccCCCcccHHHhccc
Q psy15549 450 Y----VPPSGEESKENDPTKG--EPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 450 ~----~~~~~~~~~~~~~~~~--~~~~s~~~~~~~~~w~~~ 484 (621)
. .+|...+.+.++..+- -.+++.+.|..+.-|++.
T Consensus 436 PrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in 476 (481)
T KOG0300|consen 436 PRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKIN 476 (481)
T ss_pred CcccccccceeeeeeeccccCcccccccccccceeeeeEec
Confidence 2 2355556666665543 378899999999989754
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-26 Score=221.48 Aligned_cols=281 Identities=18% Similarity=0.300 Sum_probs=223.5
Q ss_pred ccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCc
Q psy15549 4 TIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA 83 (621)
Q Consensus 4 ~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~ 83 (621)
+.-..+.+|+..|..+++.+.. .+++++.||+++ +|+-...+... ...+.+|.+.
T Consensus 5 ~ls~~l~gH~~DVr~v~~~~~~------~i~s~sRd~t~~--------------vw~~~~~~~l~-----~~~~~~~~g~ 59 (745)
T KOG0301|consen 5 KLSHELEGHKSDVRAVAVTDGV------CIISGSRDGTVK--------------VWAKKGKQYLE-----THAFEGPKGF 59 (745)
T ss_pred eeEEEeccCccchheeEecCCe------EEeecCCCCcee--------------eeeccCccccc-----ceecccCcce
Confidence 3445677899999999988876 899999999999 99876554322 2346778888
Q ss_pred EEE-EEEcc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 84 VNV-VRFSP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 84 V~~-l~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
|.+ ++|-+ ++-.|++|+ |..+.+|..... .+...+.+|...|+++....++. +++||-|.++++|....
T Consensus 60 i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~-------~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~ 131 (745)
T KOG0301|consen 60 IANSICYAESDKGRLVVGGMDTTIIVFKLSQA-------EPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGE 131 (745)
T ss_pred eeccceeccccCcceEeecccceEEEEecCCC-------CchhhhhccccceeeeecCCcCc-eEecccccceEEecchh
Confidence 877 88876 444566666 889999999877 77889999999999999887776 99999999999998665
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 240 (621)
.. ..+.+|...|+++..-|.+ .++||+.|.+|++|.- ++.+++|.+|...|+.+
T Consensus 132 l~-----------------------~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL 185 (745)
T KOG0301|consen 132 LV-----------------------YSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGL 185 (745)
T ss_pred hh-----------------------cccCCcchheeeeeecCCC-cEEeccCcceeeeccC--Cchhhhhccchhheeee
Confidence 43 4478999999999999988 8999999999999974 88899999999999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 241 AWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 241 ~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
++-+++. |++++.||.|++|++ ++..+.++.+ |...+.++....+
T Consensus 186 ~vl~~~~-flScsNDg~Ir~w~~-~ge~l~~~~g-----------------------htn~vYsis~~~~---------- 230 (745)
T KOG0301|consen 186 AVLDDSH-FLSCSNDGSIRLWDL-DGEVLLEMHG-----------------------HTNFVYSISMALS---------- 230 (745)
T ss_pred EEecCCC-eEeecCCceEEEEec-cCceeeeeec-----------------------cceEEEEEEecCC----------
Confidence 9988754 778999999999999 6666665543 2334444443333
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
++.++++++|++++||+..
T Consensus 231 ------------------------------------------------------------~~~Ivs~gEDrtlriW~~~- 249 (745)
T KOG0301|consen 231 ------------------------------------------------------------DGLIVSTGEDRTLRIWKKD- 249 (745)
T ss_pred ------------------------------------------------------------CCeEEEecCCceEEEeecC-
Confidence 3556667788999999877
Q ss_pred CceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 401 ASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 401 ~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
.+.+.+.. ....|+++.+-++|. |++|+.||.||||...
T Consensus 250 -e~~q~I~l-PttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 250 -ECVQVITL-PTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVD 288 (745)
T ss_pred -ceEEEEec-CccceEEEEEeeCCC-EEEeccCceEEEEEec
Confidence 55555531 334899999988886 7888899999999987
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-25 Score=226.72 Aligned_cols=259 Identities=16% Similarity=0.218 Sum_probs=181.1
Q ss_pred CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEEccCCCC-CCCCCCCCccccccc
Q psy15549 101 DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWKQKTDQD-LPEFPSSNLDEENVN 178 (621)
Q Consensus 101 d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~ 178 (621)
.+.+.+|+.... ..+..+.+|.+.|.+++|+|+ +.+||+|+.|++|+|||+.+... ...+
T Consensus 53 ~gvI~L~~~~r~-------~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i----------- 114 (568)
T PTZ00420 53 IGAIRLENQMRK-------PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEI----------- 114 (568)
T ss_pred eeEEEeeecCCC-------ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcccccc-----------
Confidence 555788887654 456678899999999999996 78999999999999999986532 1100
Q ss_pred ccceeeeeeecCCCCCeEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCc
Q psy15549 179 KEHWIVTKILRGHLEDVYDISWSPTSTH-LISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRS 257 (621)
Q Consensus 179 ~~~~~~~~~~~~~~~~v~~i~~spd~~~-l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~ 257 (621)
......+.+|...|.+++|+|++.. |++++.|+.|+|||+++++.+..+. |...|.+++|+|+|.+|++++.|+.
T Consensus 115 ---~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~ 190 (568)
T PTZ00420 115 ---KDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKH 190 (568)
T ss_pred ---ccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCE
Confidence 0012456789999999999998875 5789999999999999998877775 5678999999999999999999999
Q ss_pred EEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeee
Q psy15549 258 LRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVF 337 (621)
Q Consensus 258 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~ 337 (621)
|+|||+++++.+..+..|...... ..+....|++++.+|++++ .++
T Consensus 191 IrIwD~Rsg~~i~tl~gH~g~~~s------------------~~v~~~~fs~d~~~IlTtG-----~d~----------- 236 (568)
T PTZ00420 191 MHIIDPRKQEIASSFHIHDGGKNT------------------KNIWIDGLGGDDNYILSTG-----FSK----------- 236 (568)
T ss_pred EEEEECCCCcEEEEEecccCCcee------------------EEEEeeeEcCCCCEEEEEE-----cCC-----------
Confidence 999999999887766543321100 0011223445555554433 000
Q ss_pred eecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC-CceeEEEec-ccccce
Q psy15549 338 TRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH-ASPFAFIAN-IHYTKL 415 (621)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~-~h~~~v 415 (621)
..++.|+|||++. .+++..+.. .+.+.+
T Consensus 237 --------------------------------------------------~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L 266 (568)
T PTZ00420 237 --------------------------------------------------NNMREMKLWDLKNTTSALVTMSIDNASAPL 266 (568)
T ss_pred --------------------------------------------------CCccEEEEEECCCCCCceEEEEecCCccce
Confidence 0124799999885 555555421 223334
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCC--CCCcccccCCCCCC
Q psy15549 416 TDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP--PSGEESKENDPTKG 466 (621)
Q Consensus 416 ~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 466 (621)
......++|.++++|+.|++|++|++..+.+.. +.. +......+.|.|+.
T Consensus 267 ~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~-l~~~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 267 IPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRK-VNEYKSCSPFRSFGFLPKQ 318 (568)
T ss_pred EEeeeCCCCCEEEEEECCCeEEEEEccCCcEEe-ecccccCCCccceEEcccc
Confidence 444455668999999999999999998764322 222 22334445555543
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-27 Score=215.73 Aligned_cols=302 Identities=16% Similarity=0.181 Sum_probs=233.5
Q ss_pred cccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeee-cCCCCCeEEEEE
Q psy15549 122 ASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL-RGHLEDVYDISW 200 (621)
Q Consensus 122 ~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~ 200 (621)
...+..|...|.+++++|++++.++++.+++|.-|++.+++....+-.... ...........- .+|...+.+++.
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~e----v~k~~~~~~k~~r~~h~keil~~av 210 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDE----VLKSHGNPLKESRKGHVKEILTLAV 210 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccch----hhhhccCCCCcccccccceeEEEEE
Confidence 455667999999999999999999999999999999999986533311110 000011111111 389999999999
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCC
Q psy15549 201 SPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVD 280 (621)
Q Consensus 201 spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 280 (621)
++||++|++|+.|..|.||+.++.+.++.+.+|.+.|.+++|-.....|++++.|+.|++|++.....+.++.+|.
T Consensus 211 S~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHq---- 286 (479)
T KOG0299|consen 211 SSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQ---- 286 (479)
T ss_pred cCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCc----
Confidence 9999999999999999999999999999999999999999999888899999999999999999888777776543
Q ss_pred CccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeee
Q psy15549 281 SSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVK 360 (621)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (621)
..|.++....-++.+.+++ .|.++++|.+.. .....+.++...+-+++
T Consensus 287 -------------------d~v~~IdaL~reR~vtVGg-----rDrT~rlwKi~e--------esqlifrg~~~sidcv~ 334 (479)
T KOG0299|consen 287 -------------------DGVLGIDALSRERCVTVGG-----RDRTVRLWKIPE--------ESQLIFRGGEGSIDCVA 334 (479)
T ss_pred -------------------cceeeechhcccceEEecc-----ccceeEEEeccc--------cceeeeeCCCCCeeeEE
Confidence 4456677766777776666 899999999842 22233344444454544
Q ss_pred ccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccc-----------cceEEEEEcCCCCeEEE
Q psy15549 361 CCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHY-----------TKLTDITWSSDGKVLIA 429 (621)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-----------~~v~~~~~spdg~~l~s 429 (621)
|- ++..+++|+.+|.|.+|++.+.+++.....+|. ..|++++..|...++|+
T Consensus 335 ~I-----------------n~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~as 397 (479)
T KOG0299|consen 335 FI-----------------NDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLAS 397 (479)
T ss_pred Ee-----------------cccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEe
Confidence 43 568899999999999999999999887765553 27999999999999999
Q ss_pred EeCCCcEEEEEecCC----cCCcccCCCCCcccccCCCCCCCCcc-cCCCcccHHHh
Q psy15549 430 SSTDGYCSIISFGDN----EIGIPYVPPSGEESKENDPTKGEPVR-SEDKPRSAEQA 481 (621)
Q Consensus 430 ~s~dg~i~iw~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~~~~w 481 (621)
|+.+|.|++|.+.++ .++..+. -.+.++.+.|+.+|+.++ ..+....+-.|
T Consensus 398 GS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGkEhRlGRW 453 (479)
T KOG0299|consen 398 GSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGKEHRLGRW 453 (479)
T ss_pred cCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEeccccccccee
Confidence 999999999999988 3334444 456788888999998444 33333333334
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-25 Score=210.32 Aligned_cols=341 Identities=15% Similarity=0.180 Sum_probs=241.7
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
+.-|.||+|.++| -++||.++|.|. ||+.......++ ...|.+.|.+++...+
T Consensus 246 kk~Vl~v~F~eng------dviTgDS~G~i~--------------Iw~~~~~~~~k~-------~~aH~ggv~~L~~lr~ 298 (626)
T KOG2106|consen 246 KKFVLCVTFLENG------DVITGDSGGNIL--------------IWSKGTNRISKQ-------VHAHDGGVFSLCMLRD 298 (626)
T ss_pred ceEEEEEEEcCCC------CEEeecCCceEE--------------EEeCCCceEEeE-------eeecCCceEEEEEecC
Confidence 4569999999999 589999999999 998865544333 4499999999999999
Q ss_pred CCEEEEEc-CCceEEEEeccCccccc----c-----------------------------ceecccccccCCCeEEEEEC
Q psy15549 93 GELLASGD-DVGKEIWYLTERESGIA----N-----------------------------VEFASDLSRHQKAVNVVRFS 138 (621)
Q Consensus 93 g~~las~~-d~~v~iw~~~~~~~~~~----~-----------------------------~~~~~~~~~h~~~V~~i~~s 138 (621)
|.+|. |+ |..|..||-.-...... . -.......+|....+.++.+
T Consensus 299 GtllS-GgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~h 377 (626)
T KOG2106|consen 299 GTLLS-GGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATH 377 (626)
T ss_pred ccEee-cCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcC
Confidence 99888 65 99999998432210000 0 00111245788899999999
Q ss_pred CCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEE
Q psy15549 139 PNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIM 218 (621)
Q Consensus 139 p~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~v 218 (621)
|+...+++|+.|+.+++|+ ..+.. -...-..++.|+.|+|.| .+|.|...|...+
T Consensus 378 ps~~q~~T~gqdk~v~lW~--~~k~~----------------------wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V 432 (626)
T KOG2106|consen 378 PSKNQLLTCGQDKHVRLWN--DHKLE----------------------WTKIIEDPAECADFHPSG-VVAVGTATGRWFV 432 (626)
T ss_pred CChhheeeccCcceEEEcc--CCcee----------------------EEEEecCceeEeeccCcc-eEEEeeccceEEE
Confidence 9999999999999999999 33321 112345678999999999 9999999999999
Q ss_pred EECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCcee-eeecccCCCCCCCccccccccccccccCC
Q psy15549 219 WDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV-ISRACRSKLPVDSSHELFDKVVPLFHDDT 297 (621)
Q Consensus 219 wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (621)
.|.++...+..-.. ..++++++|+|+|.+||.|+.|+.|+||.+..... .......
T Consensus 433 ~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~---------------------- 489 (626)
T KOG2106|consen 433 LDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKC---------------------- 489 (626)
T ss_pred EecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeee----------------------
Confidence 99999666655544 88999999999999999999999999999875433 2222111
Q ss_pred cccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccc--eeeeeccceeeecCCCCCCC
Q psy15549 298 MKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYY--SVAVKCCPVLFELKPSDDKP 375 (621)
Q Consensus 298 ~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 375 (621)
..++|+.+.||+|++++.+.+ .|..+-.|.......... ....+.. ...+.|.-.......+....
T Consensus 490 ~gs~ithLDwS~Ds~~~~~~S-----~d~eiLyW~~~~~~~~ts-------~kDvkW~t~~c~lGF~v~g~s~~t~i~a~ 557 (626)
T KOG2106|consen 490 SGSPITHLDWSSDSQFLVSNS-----GDYEILYWKPSECKQITS-------VKDVKWATYTCTLGFEVFGGSDGTDINAV 557 (626)
T ss_pred cCceeEEeeecCCCceEEecc-----CceEEEEEccccCcccce-------ecceeeeeeEEEEEEEEecccCCchHHHh
Confidence 126789999999999999998 677777773221111110 1111110 01111211111111222233
Q ss_pred CccCCCcEEEEEEcCCcEEEEeCCCCce--eEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 376 LFKLPYRIVIAVATENNILLYDTQHASP--FAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 376 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
+.+.....++++...|.|++|...-.++ ......+|.+.|++++|.-+...|++.+.|.+|..|++
T Consensus 558 ~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~l 625 (626)
T KOG2106|consen 558 ARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWRL 625 (626)
T ss_pred hhhhhhhhhhccccCceEEEEccccCCCcccceeeccccceeEEEEEeeCCceEEecCCCceEEEEEe
Confidence 4444556677777789999998644332 22223579999999999998888888889999999986
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.6e-26 Score=196.70 Aligned_cols=309 Identities=16% Similarity=0.234 Sum_probs=232.6
Q ss_pred cccccCcEEEEEEcc-CCCEEEEEc-CCceEEEEeccCccccccc-----e---ecccccccCCCeEEEEECC-CCCEEE
Q psy15549 77 LSRHQKAVNVVRFSP-NGELLASGD-DVGKEIWYLTERESGIANV-----E---FASDLSRHQKAVNVVRFSP-NGELLA 145 (621)
Q Consensus 77 ~~~h~~~V~~l~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~-----~---~~~~~~~h~~~V~~i~~sp-~g~~l~ 145 (621)
...|.+.|+++...+ .|+++++|+ |+.+.+||+.......... . ....-.+|.-.|..+.|-| |...+.
T Consensus 39 ~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt 118 (397)
T KOG4283|consen 39 VRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT 118 (397)
T ss_pred eccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence 457899999999988 689999988 8899999998754211110 1 1112346888999999999 666889
Q ss_pred EEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC---CCEEEEEeCCCeEEEEECC
Q psy15549 146 SGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT---STHLISGSVDNTAIMWDVH 222 (621)
Q Consensus 146 s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd---~~~l~s~~~dg~i~vwd~~ 222 (621)
+++.|.+++|||..+-+.... ....+.|+.-+++|- ..++|+|..+-.|++-|+.
T Consensus 119 ssSFDhtlKVWDtnTlQ~a~~----------------------F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~ 176 (397)
T KOG4283|consen 119 SSSFDHTLKVWDTNTLQEAVD----------------------FKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIA 176 (397)
T ss_pred cccccceEEEeecccceeeEE----------------------eecCceeehhhcChhhhcceEEEEecCCCcEEEEecc
Confidence 999999999999998875422 245667888888883 3578889999999999999
Q ss_pred CCcEEEEeccCCcceEEEEEcCCCCE-EEEEeCCCcEEEEEccCc-eeeeecccCCCCCCCccccccccccc-cccCCcc
Q psy15549 223 KGKNLGILTEHKKFVQGVAWDPKNQY-VATLSSDRSLRTYSIQSK-KVISRACRSKLPVDSSHELFDKVVPL-FHDDTMK 299 (621)
Q Consensus 223 ~~~~~~~~~~~~~~v~~l~~sp~~~~-l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 299 (621)
+|..-+++.+|...|.++.|+|...+ |++|+.||.|++||++.- .+...+..+... ..++ ..+..+.
T Consensus 177 SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k----------~~p~~~~n~ah~ 246 (397)
T KOG4283|consen 177 SGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTK----------RPPILKTNTAHY 246 (397)
T ss_pred CCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCc----------cCcccccccccc
Confidence 99999999999999999999998877 678999999999999875 555555544321 1111 1355678
Q ss_pred cceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccC
Q psy15549 300 SFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKL 379 (621)
Q Consensus 300 ~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (621)
+.+.+++|+.||.++++.+ .|..+++|+............+...-......+. +. ..
T Consensus 247 gkvngla~tSd~~~l~~~g-----td~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~-~~-----------------~~ 303 (397)
T KOG4283|consen 247 GKVNGLAWTSDARYLASCG-----TDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVH-IQ-----------------SM 303 (397)
T ss_pred ceeeeeeecccchhhhhcc-----CccceEEeecccCcccccccccccccccccceEE-Ee-----------------ec
Confidence 8899999999999999998 8999999998754332222111111110000000 11 11
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
+...++..-.++.+.++++-.+..+..+. +|...|.+.++-|+=+.+.++..|+.|..|-.
T Consensus 304 ~s~vfv~~p~~~~lall~~~sgs~ir~l~-~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 304 DSDVFVLFPNDGSLALLNLLEGSFVRRLS-THLKRINCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred ccceEEEEecCCeEEEEEccCceEEEeee-cccceeeEEeecCchhhhhccccCCccccccc
Confidence 23445555567999999999999998884 58899999999999999999999999999986
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=213.50 Aligned_cols=278 Identities=19% Similarity=0.294 Sum_probs=214.8
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccccc---ceeeccccccccCc
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIA---NVEFASDLSRHQKA 83 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~---~~~~~~~~~~h~~~ 83 (621)
.....|.+.|..+.+.|... ..+|+++..+.|. |||......... ...+...+.+|...
T Consensus 118 ~~~i~h~gEVnRaRymPQnp----~iVAt~t~~~dv~--------------Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~e 179 (422)
T KOG0264|consen 118 SQKINHDGEVNRARYMPQNP----NIVATKTSSGDVY--------------VFDYTKHPSKPKASGECRPDLRLKGHEKE 179 (422)
T ss_pred EEeccCCccchhhhhCCCCC----cEEEecCCCCCEE--------------EEEeccCCCcccccccCCCceEEEeeccc
Confidence 34566899999999999887 6888889999999 777665433222 22334468999998
Q ss_pred EEEEEEccCC-CEEEEE-cCCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccC
Q psy15549 84 VNVVRFSPNG-ELLASG-DDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 84 V~~l~~spdg-~~las~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~ 160 (621)
-++|+|++.. -.|+++ .|++|.+||+...............+.+|...|..++|++ +..+|++++.|+.+.|||+++
T Consensus 180 g~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~ 259 (422)
T KOG0264|consen 180 GYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRS 259 (422)
T ss_pred ccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCC
Confidence 8899999843 244444 4999999999987665445566778899999999999999 567899999999999999996
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCC-cEEEEeccCCcceE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKG-KNLGILTEHKKFVQ 238 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~ 238 (621)
+... ......+|.+.|.|++|+| ++..||+|+.|++|.+||+++. +++.++.+|...|.
T Consensus 260 ~~~~-------------------~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~ 320 (422)
T KOG0264|consen 260 NTSK-------------------PSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVF 320 (422)
T ss_pred CCCC-------------------CcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceE
Confidence 4111 1255678999999999999 6678999999999999999974 56889999999999
Q ss_pred EEEEcCCC-CEEEEEeCCCcEEEEEccCceeeee-cccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 239 GVAWDPKN-QYVATLSSDRSLRTYSIQSKKVISR-ACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 239 ~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
++.|+|+. ..|++++.|+.+.+||+..-...+. ...... ....+|.-.+|...|..+.|+|+..++++
T Consensus 321 ~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dg----------ppEllF~HgGH~~kV~DfsWnp~ePW~I~ 390 (422)
T KOG0264|consen 321 QVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDG----------PPELLFIHGGHTAKVSDFSWNPNEPWTIA 390 (422)
T ss_pred EEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccC----------CcceeEEecCcccccccccCCCCCCeEEE
Confidence 99999965 6788999999999999965332221 111111 11224555677888999999999987765
Q ss_pred ccccccCCCCCCcceeeee
Q psy15549 317 PSGCLENSDSTRKPISVTH 335 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~ 335 (621)
... .|+.+.+|....
T Consensus 391 Sva----eDN~LqIW~~s~ 405 (422)
T KOG0264|consen 391 SVA----EDNILQIWQMAE 405 (422)
T ss_pred Eec----CCceEEEeeccc
Confidence 554 899999998764
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=235.05 Aligned_cols=312 Identities=17% Similarity=0.206 Sum_probs=238.9
Q ss_pred ccCCCeEEEEECCCCCEEEEEe--CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC
Q psy15549 127 RHQKAVNVVRFSPNGELLASGD--DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS 204 (621)
Q Consensus 127 ~h~~~V~~i~~sp~g~~l~s~s--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~ 204 (621)
.+...|.++..+|+|..+|+|+ .||.++||+.+.--.-. ...+............|.+.|.|+.|+|||
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~---------~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG 81 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEK---------EEKNENLPKHLCTMDDHDGSVNCVRFSPDG 81 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchh---------hhhhcccchhheeeccccCceeEEEECCCC
Confidence 3455799999999999999999 89999999865432100 000000112345667899999999999999
Q ss_pred CEEEEEeCCCeEEEEECCC------------------CcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCc
Q psy15549 205 THLISGSVDNTAIMWDVHK------------------GKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSK 266 (621)
Q Consensus 205 ~~l~s~~~dg~i~vwd~~~------------------~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~ 266 (621)
++||+|+.|+.|.||.... .+.+..+.+|...|..++|+|++.+|++++.|++|.||+..+.
T Consensus 82 ~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF 161 (942)
T KOG0973|consen 82 SYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTF 161 (942)
T ss_pred CeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccc
Confidence 9999999999999998762 1356788899999999999999999999999999999999999
Q ss_pred eeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCc
Q psy15549 267 KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPA 346 (621)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 346 (621)
+.+..+..| .+.|..+.|.|-|+|||+-+ .|+++++|+............+.
T Consensus 162 ~~~~vl~~H-----------------------~s~VKGvs~DP~Gky~ASqs-----dDrtikvwrt~dw~i~k~It~pf 213 (942)
T KOG0973|consen 162 ELLKVLRGH-----------------------QSLVKGVSWDPIGKYFASQS-----DDRTLKVWRTSDWGIEKSITKPF 213 (942)
T ss_pred eeeeeeecc-----------------------cccccceEECCccCeeeeec-----CCceEEEEEcccceeeEeeccch
Confidence 888887644 45568899999999999999 89999999966533333223322
Q ss_pred eecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc----CCcEEEEeCCCCceeEEEecccccceEEEEEcC
Q psy15549 347 VCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT----ENNILLYDTQHASPFAFIANIHYTKLTDITWSS 422 (621)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp 422 (621)
... ........+.|+| +|.+|++... -..+.|.+..+.+.-..+ .||..++.++.|+|
T Consensus 214 ~~~-~~~T~f~RlSWSP----------------DG~~las~nA~n~~~~~~~IieR~tWk~~~~L-vGH~~p~evvrFnP 275 (942)
T KOG0973|consen 214 EES-PLTTFFLRLSWSP----------------DGHHLASPNAVNGGKSTIAIIERGTWKVDKDL-VGHSAPVEVVRFNP 275 (942)
T ss_pred hhC-CCcceeeecccCC----------------CcCeecchhhccCCcceeEEEecCCceeeeee-ecCCCceEEEEeCh
Confidence 211 1222344455555 7888887754 237889988777766666 47999999999998
Q ss_pred C--------C-----C----eEEEEeCCCcEEEEEecCCcCCcccCC-CCCcccccCCCCCCCCcccCCCcccHHHhccc
Q psy15549 423 D--------G-----K----VLIASSTDGYCSIISFGDNEIGIPYVP-PSGEESKENDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 423 d--------g-----~----~l~s~s~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
. | . .+|+||.|++|.||.....+.+-.... ....+..+.|+|||..+...+.||+|.+...+
T Consensus 276 ~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fe 355 (942)
T KOG0973|consen 276 KLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFE 355 (942)
T ss_pred HHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcc
Confidence 2 1 1 578899999999999976554443333 45568889999999999999999999999988
Q ss_pred Ccccccccc
Q psy15549 485 GKVLGEKQT 493 (621)
Q Consensus 485 ~~~~~~~~~ 493 (621)
++.++.+-.
T Consensus 356 e~ElG~~ls 364 (942)
T KOG0973|consen 356 EKELGVALS 364 (942)
T ss_pred hHHhCcccC
Confidence 877766543
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-26 Score=219.14 Aligned_cols=326 Identities=18% Similarity=0.249 Sum_probs=239.0
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
..+|.++|..++...+++ .|++++.|-+|+ +|+...+.. -...++..|.+.|.|++
T Consensus 69 me~HsDWVNDiiL~~~~~-----tlIS~SsDtTVK--------------~W~~~~~~~-----~c~stir~H~DYVkcla 124 (735)
T KOG0308|consen 69 MEHHSDWVNDIILCGNGK-----TLISASSDTTVK--------------VWNAHKDNT-----FCMSTIRTHKDYVKCLA 124 (735)
T ss_pred hhhhHhHHhhHHhhcCCC-----ceEEecCCceEE--------------EeecccCcc-----hhHhhhhcccchheeee
Confidence 456899999999999998 999999999999 888876631 12345889999999999
Q ss_pred E-ccCCCEEEEEc-CCceEEEEeccCcc---ccccceeccccc-ccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 89 F-SPNGELLASGD-DVGKEIWYLTERES---GIANVEFASDLS-RHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 89 ~-spdg~~las~~-d~~v~iw~~~~~~~---~~~~~~~~~~~~-~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
+ .++...+|+|+ |+.|.+||+..+.. ..........+. ++...|.+++.++.|..|++|+..+.|++||.++.+
T Consensus 125 ~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~ 204 (735)
T KOG0308|consen 125 YIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCK 204 (735)
T ss_pred ecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEecccccc
Confidence 9 78888999999 99999999997632 000111222333 899999999999999999999999999999999998
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~ 242 (621)
.+ ..+.+|...|.++..++||..+++++.||+|++||+...+++.++..|...|.++..
T Consensus 205 ki---------------------mkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~ 263 (735)
T KOG0308|consen 205 KI---------------------MKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQS 263 (735)
T ss_pred ce---------------------eeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEee
Confidence 75 556799999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
+|+-.++++|+.||.|..=|+++......+.....| +..+..+.+.+-+-+++
T Consensus 264 ~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daP-----------------------v~~l~~~~~~~~~WvtT---- 316 (735)
T KOG0308|consen 264 SPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAP-----------------------VLKLHLHEHDNSVWVTT---- 316 (735)
T ss_pred CCCcceEEecCCCCcEEecccCCchhheEeecCCCc-----------------------hhhhhhccccCCceeee----
Confidence 999999999999999999999986544444443333 34455553333333444
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCC-CCCccCCCcEEEEEEcCCcEEEEeCCCC
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDD-KPLFKLPYRIVIAVATENNILLYDTQHA 401 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 401 (621)
.|+.|+-|........................+......|.......... ....-.+-+.+++-...|.+.+||+-..
T Consensus 317 -tds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~~ 395 (735)
T KOG0308|consen 317 -TDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKGNVALWDILAC 395 (735)
T ss_pred -ccccceecCCccccccccCCCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeecCCCCEEEEEeeee
Confidence 67888888765443222211111111111122222222232222211111 2223335578999999999999998876
Q ss_pred ceeEEE
Q psy15549 402 SPFAFI 407 (621)
Q Consensus 402 ~~~~~~ 407 (621)
..+..+
T Consensus 396 ~~~~d~ 401 (735)
T KOG0308|consen 396 VKVEDF 401 (735)
T ss_pred eehhhc
Confidence 655544
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=208.22 Aligned_cols=266 Identities=15% Similarity=0.236 Sum_probs=206.3
Q ss_pred CCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 93 GELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 93 g~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
+.+++++. ...+.+|.+.... .....---.++|.+++-+|+|.+|+.|+..|.|++|.+.++..+
T Consensus 50 ~~yllsaq~~rp~l~vw~i~k~~-------~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL------ 116 (476)
T KOG0646|consen 50 NEYLLSAQLKRPLLHVWEILKKD-------QVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILL------ 116 (476)
T ss_pred hhheeeecccCccccccccCchh-------hhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHH------
Confidence 36777776 5568999987653 12222234678999999999999999989999999999999976
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC---------CCcEEEEeccCCcceEEEE
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH---------KGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~---------~~~~~~~~~~~~~~v~~l~ 241 (621)
..+.+|-..|+|+.|+-||.+|++|+.||.|.+|.+. +-++++.+..|.-+|+.+.
T Consensus 117 ---------------~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ 181 (476)
T KOG0646|consen 117 ---------------NVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQ 181 (476)
T ss_pred ---------------HHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEE
Confidence 5568999999999999999999999999999999873 3456788899999999998
Q ss_pred EcCC--CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccc
Q psy15549 242 WDPK--NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSG 319 (621)
Q Consensus 242 ~sp~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~ 319 (621)
..+. ..+|++++.|.++++||+..+.++..+. .+..+.+++++|-++.+++|+
T Consensus 182 ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~------------------------fp~si~av~lDpae~~~yiGt- 236 (476)
T KOG0646|consen 182 IGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT------------------------FPSSIKAVALDPAERVVYIGT- 236 (476)
T ss_pred ecCCCccceEEEecCCceEEEEEeccceeeEEEe------------------------cCCcceeEEEcccccEEEecC-
Confidence 8765 3679999999999999999998887763 234568999999999999988
Q ss_pred cccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCC
Q psy15549 320 CLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQ 399 (621)
Q Consensus 320 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 399 (621)
.+|.+.+.++..... .. .+=..+.++..
T Consensus 237 ----~~G~I~~~~~~~~~~-------------~~-----------------------------------~~v~~k~~~~~ 264 (476)
T KOG0646|consen 237 ----EEGKIFQNLLFKLSG-------------QS-----------------------------------AGVNQKGRHEE 264 (476)
T ss_pred ----CcceEEeeehhcCCc-------------cc-----------------------------------ccccccccccc
Confidence 677666555432110 00 00001112211
Q ss_pred CCceeEEEeccccc--ceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCC
Q psy15549 400 HASPFAFIANIHYT--KLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTK 465 (621)
Q Consensus 400 ~~~~~~~~~~~h~~--~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (621)
+..+..+ .+|.+ .|+|++.+-||..|++|+.||.|+|||+.+.++++.+....+.++.+.+.|-
T Consensus 265 -~t~~~~~-~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~ 330 (476)
T KOG0646|consen 265 -NTQINVL-VGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPL 330 (476)
T ss_pred -cceeeee-ccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeecc
Confidence 1223333 46777 9999999999999999999999999999999999999877777777766444
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.3e-27 Score=208.70 Aligned_cols=286 Identities=17% Similarity=0.289 Sum_probs=222.1
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
+.+|.++|.|++=+|..- ..+++|+.||.|+ |||+....+... +.+|.+.|..|+
T Consensus 62 L~gHrdGV~~lakhp~~l----s~~aSGs~DG~Vk--------------iWnlsqR~~~~~-------f~AH~G~V~Gi~ 116 (433)
T KOG0268|consen 62 LDGHRDGVSCLAKHPNKL----STVASGSCDGEVK--------------IWNLSQRECIRT-------FKAHEGLVRGIC 116 (433)
T ss_pred ccccccccchhhcCcchh----hhhhccccCceEE--------------EEehhhhhhhhe-------eecccCceeeEE
Confidence 478999999999999883 3899999999999 999998776554 999999999999
Q ss_pred EccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 89 FSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 89 ~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
+.. +.++.+|.|.+|+.|.+... +.+++.+ ...+..+.-+..+..++|||.+ |.|||.....++
T Consensus 117 v~~-~~~~tvgdDKtvK~wk~~~~--------p~~tilg-~s~~~gIdh~~~~~~FaTcGe~--i~IWD~~R~~Pv---- 180 (433)
T KOG0268|consen 117 VTQ-TSFFTVGDDKTVKQWKIDGP--------PLHTILG-KSVYLGIDHHRKNSVFATCGEQ--IDIWDEQRDNPV---- 180 (433)
T ss_pred ecc-cceEEecCCcceeeeeccCC--------cceeeec-cccccccccccccccccccCce--eeecccccCCcc----
Confidence 988 66777777999999998762 3333332 3456667777677789999875 999999888766
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~ 247 (621)
..+.-....|.++.|+|-. ..|+++..|+.|.+||++++.+++.+.. ...-..++|+|.+-
T Consensus 181 -----------------~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~-~mRTN~IswnPeaf 242 (433)
T KOG0268|consen 181 -----------------SSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVIL-TMRTNTICWNPEAF 242 (433)
T ss_pred -----------------ceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeee-eccccceecCcccc
Confidence 3445566789999999965 4677777999999999999998876642 33346789999777
Q ss_pred EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCC
Q psy15549 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDST 327 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~ 327 (621)
.|++|++|..++.||++....... .-..|.+.+.++.|||.|+-+++++ .|.+
T Consensus 243 nF~~a~ED~nlY~~DmR~l~~p~~----------------------v~~dhvsAV~dVdfsptG~Efvsgs-----yDks 295 (433)
T KOG0268|consen 243 NFVAANEDHNLYTYDMRNLSRPLN----------------------VHKDHVSAVMDVDFSPTGQEFVSGS-----YDKS 295 (433)
T ss_pred ceeeccccccceehhhhhhcccch----------------------hhcccceeEEEeccCCCcchhcccc-----ccce
Confidence 788999999999999987542111 1234566789999999999999999 9999
Q ss_pred CcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 328 RKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 328 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
|+|+.......+..... .--..++++.|+. +..++++|+.|+.|++|-..-.+
T Consensus 296 IRIf~~~~~~SRdiYht------kRMq~V~~Vk~S~----------------Dskyi~SGSdd~nvRlWka~Ase 348 (433)
T KOG0268|consen 296 IRIFPVNHGHSRDIYHT------KRMQHVFCVKYSM----------------DSKYIISGSDDGNVRLWKAKASE 348 (433)
T ss_pred EEEeecCCCcchhhhhH------hhhheeeEEEEec----------------cccEEEecCCCcceeeeecchhh
Confidence 99999875443332111 1123466777665 77999999999999999865443
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.2e-25 Score=218.91 Aligned_cols=287 Identities=19% Similarity=0.318 Sum_probs=225.1
Q ss_pred CccccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccc-cccccceeecccccc
Q psy15549 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTER-ESGIANVEFASDLSR 79 (621)
Q Consensus 1 m~~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~-~~~~~~~~~~~~~~~ 79 (621)
|..........|..+.+.|+|.|+|+ +|++++.||.|+ +|+.... +.+.. +.-
T Consensus 1 M~~~r~klRyaht~G~t~i~~d~~ge-----fi~tcgsdg~ir--------------~~~~~sd~e~P~t-------i~~ 54 (933)
T KOG1274|consen 1 MSSTRLKLRYAHTGGLTLICYDPDGE-----FICTCGSDGDIR--------------KWKTNSDEEEPET-------IDI 54 (933)
T ss_pred CCcccccchhhccCceEEEEEcCCCC-----EEEEecCCCceE--------------EeecCCcccCCch-------hhc
Confidence 45445556678999999999999999 999999999999 8877665 22222 333
Q ss_pred ccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy15549 80 HQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~ 158 (621)
+...|.+++... .+|++|+ ++.|.+|.+..+. .-..+...+.++.+++|+-+|+++|.||.|-.|++.++
T Consensus 55 ~g~~v~~ia~~s--~~f~~~s~~~tv~~y~fps~~-------~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~ 125 (933)
T KOG1274|consen 55 SGELVSSIACYS--NHFLTGSEQNTVLRYKFPSGE-------EDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNL 125 (933)
T ss_pred cCceeEEEeecc--cceEEeeccceEEEeeCCCCC-------ccceeeeeeccceEEEEecCCcEEEeecCceeEEEEec
Confidence 777788877543 3666666 8899999998873 33345556779999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc------
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE------ 232 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~------ 232 (621)
...... ..+.+|.++|.++.|+|++++||+.+-||.|++||+.++.+..++.+
T Consensus 126 ~D~s~~---------------------~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~ 184 (933)
T KOG1274|consen 126 DDSSQE---------------------KVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNE 184 (933)
T ss_pred cccchh---------------------eeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCcccc
Confidence 888754 67899999999999999999999999999999999999887766543
Q ss_pred --CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 233 --HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 233 --~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
....+..++|+|+|..|+..+.|+.|++|+..+......+.. ..+...+..++|+|+
T Consensus 185 ~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~---------------------~~~ss~~~~~~wsPn 243 (933)
T KOG1274|consen 185 FILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRD---------------------KLSSSKFSDLQWSPN 243 (933)
T ss_pred ccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecc---------------------cccccceEEEEEcCC
Confidence 134567899999988888899999999999998887766532 223334788999999
Q ss_pred CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 311 g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
|+|||+++ -+
T Consensus 244 G~YiAAs~----------------------------------------------------------------------~~ 253 (933)
T KOG1274|consen 244 GKYIAAST----------------------------------------------------------------------LD 253 (933)
T ss_pred CcEEeeec----------------------------------------------------------------------cC
Confidence 99998866 56
Q ss_pred CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEE
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSII 439 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw 439 (621)
|.|.|||..+... ......|.+++|.|++..|-.-..-|...+|
T Consensus 254 g~I~vWnv~t~~~-----~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~ 297 (933)
T KOG1274|consen 254 GQILVWNVDTHER-----HEFKRAVCCEAWKPNANAITLITALGTLGVS 297 (933)
T ss_pred CcEEEEecccchh-----ccccceeEEEecCCCCCeeEEEeeccccccC
Confidence 7788888877322 1134579999999998866555555555444
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=207.73 Aligned_cols=272 Identities=20% Similarity=0.324 Sum_probs=201.0
Q ss_pred ccccCcEEEEEEccCCCEEE-EEc-CCceEEEEeccCccccc---cceecccccccCCCeEEEEECCCC-CEEEEEeCCC
Q psy15549 78 SRHQKAVNVVRFSPNGELLA-SGD-DVGKEIWYLTERESGIA---NVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDES 151 (621)
Q Consensus 78 ~~h~~~V~~l~~spdg~~la-s~~-d~~v~iw~~~~~~~~~~---~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg 151 (621)
..|.+.|+.+.+.|....|+ +.+ .+.+.|||......... ...+-..+.+|.+.-.+++|++.. -.|++++.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 45889999999999765554 445 77799999987654322 234445788999888889999843 4899999999
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECC--CCcEEE
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVH--KGKNLG 228 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~--~~~~~~ 228 (621)
+|++||+......... ......+.+|...|..++|++ +..+|++++.|+.+.|||++ +.++..
T Consensus 201 ~i~lwdi~~~~~~~~~--------------~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~ 266 (422)
T KOG0264|consen 201 TICLWDINAESKEDKV--------------VDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSH 266 (422)
T ss_pred cEEEEeccccccCCcc--------------ccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcc
Confidence 9999999876542110 113477889999999999999 55688899999999999999 556667
Q ss_pred EeccCCcceEEEEEcCC-CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 229 ILTEHKKFVQGVAWDPK-NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 229 ~~~~~~~~v~~l~~sp~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
...+|.+.|.|++|+|- +..||+|+.|++|.+||+|.... ++.....|+..|..+.|
T Consensus 267 ~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~----------------------~lh~~e~H~dev~~V~W 324 (422)
T KOG0264|consen 267 SVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK----------------------PLHTFEGHEDEVFQVEW 324 (422)
T ss_pred cccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc----------------------CceeccCCCcceEEEEe
Confidence 77899999999999995 56688999999999999998553 12234566777899999
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
||....+++.++ .|+.+.+||+...-......
T Consensus 325 SPh~etvLASSg----~D~rl~vWDls~ig~eq~~e-------------------------------------------- 356 (422)
T KOG0264|consen 325 SPHNETVLASSG----TDRRLNVWDLSRIGEEQSPE-------------------------------------------- 356 (422)
T ss_pred CCCCCceeEecc----cCCcEEEEeccccccccChh--------------------------------------------
Confidence 998766655554 56666666654321111000
Q ss_pred EcCCcEEEEeCCCC-ceeEEEecccccceEEEEEcCCCCe-EEEEeCCCcEEEEEec
Q psy15549 388 ATENNILLYDTQHA-SPFAFIANIHYTKLTDITWSSDGKV-LIASSTDGYCSIISFG 442 (621)
Q Consensus 388 ~~dg~i~iwd~~~~-~~~~~~~~~h~~~v~~~~~spdg~~-l~s~s~dg~i~iw~~~ 442 (621)
|...+ -.+..+..||...|.++.|+|...+ |++.+.|+.+.||++.
T Consensus 357 ---------da~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 357 ---------DAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred ---------hhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 00001 1122344689999999999999875 6678899999999987
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-26 Score=192.15 Aligned_cols=256 Identities=17% Similarity=0.296 Sum_probs=200.7
Q ss_pred cccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC--CCCEEEEEeCCCcE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--NGELLASGDDESTI 153 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp--~g~~l~s~s~dg~i 153 (621)
...|.+.|..+...--|+.||+++ |+.|+|+.+..... ..++..|.+|.++|+.++|.. .|.+||+|+.||.|
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~----s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkV 82 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQ----SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKV 82 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCC----ceeeeEecCCCCCeeEEeecccccCcEeeEeecCceE
Confidence 467899999998888999999988 99999999987653 367888999999999999975 89999999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEECCCC---cEEE
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT--STHLISGSVDNTAIMWDVHKG---KNLG 228 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd--~~~l~s~~~dg~i~vwd~~~~---~~~~ 228 (621)
.||.-.+++-. .......|...|++++|.|. |-.|++++.||.|.|.+.+.. ....
T Consensus 83 IiWke~~g~w~-------------------k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~k 143 (299)
T KOG1332|consen 83 IIWKEENGRWT-------------------KAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSK 143 (299)
T ss_pred EEEecCCCchh-------------------hhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchh
Confidence 99998777422 22456789999999999994 568999999999999988754 2234
Q ss_pred EeccCCcceEEEEEcCC---C-----------CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccc
Q psy15549 229 ILTEHKKFVQGVAWDPK---N-----------QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFH 294 (621)
Q Consensus 229 ~~~~~~~~v~~l~~sp~---~-----------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (621)
....|.-.|.+++|.|. | +.|++|+.|..|+||+...++-...- .
T Consensus 144 i~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~---------------------~ 202 (299)
T KOG1332|consen 144 IVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLER---------------------T 202 (299)
T ss_pred hhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhh---------------------h
Confidence 45679999999999986 4 56999999999999999876321110 1
Q ss_pred cCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCC
Q psy15549 295 DDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDK 374 (621)
Q Consensus 295 ~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (621)
...|..+++.++|.|.-.+
T Consensus 203 l~~H~dwVRDVAwaP~~gl------------------------------------------------------------- 221 (299)
T KOG1332|consen 203 LEGHKDWVRDVAWAPSVGL------------------------------------------------------------- 221 (299)
T ss_pred hhhcchhhhhhhhccccCC-------------------------------------------------------------
Confidence 3355667777777775321
Q ss_pred CCccCCCcEEEEEEcCCcEEEEeCCCC--ceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 375 PLFKLPYRIVIAVATENNILLYDTQHA--SPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 375 ~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
+-.++++++.||++.||-.... .-..++.......+..+.||+.|..|+.++.|+.|.+|.-+
T Consensus 222 -----~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 222 -----PKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred -----CceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 1245788888999999976532 12222323355789999999999999999999999999855
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-25 Score=218.59 Aligned_cols=286 Identities=17% Similarity=0.277 Sum_probs=222.6
Q ss_pred ccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy15549 78 SRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVW 156 (621)
Q Consensus 78 ~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vw 156 (621)
-+|..+-+.++|.|+|.+|.+++ |+.|++|+...... ....+..+...|.+++.. +.+|++|+.+++|.+|
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e------~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y 81 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEE------EPETIDISGELVSSIACY--SNHFLTGSEQNTVLRY 81 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCccc------CCchhhccCceeEEEeec--ccceEEeeccceEEEe
Confidence 46888999999999999999887 88999999877632 222333377778877764 5589999999999999
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcc
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF 236 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 236 (621)
.+.++..- ..+....-++++++|+.+|+++|.|+.|-.|++.++.+......+++|.++
T Consensus 82 ~fps~~~~---------------------~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~ap 140 (933)
T KOG1274|consen 82 KFPSGEED---------------------TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAP 140 (933)
T ss_pred eCCCCCcc---------------------ceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCc
Confidence 99988753 344556778999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
|.++.|+|++++||+.+-||.|++||+.++.+...+..-.... .......+..++|+|+|..+++
T Consensus 141 Vl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n---------------~~~~s~i~~~~aW~Pk~g~la~ 205 (933)
T KOG1274|consen 141 VLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDN---------------EFILSRICTRLAWHPKGGTLAV 205 (933)
T ss_pred eeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccc---------------cccccceeeeeeecCCCCeEEe
Confidence 9999999999999999999999999999988776664221110 0001233456777777555554
Q ss_pred ccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEE
Q psy15549 317 PSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLY 396 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw 396 (621)
. +.|+.|.+|
T Consensus 206 ~----------------------------------------------------------------------~~d~~Vkvy 215 (933)
T KOG1274|consen 206 P----------------------------------------------------------------------PVDNTVKVY 215 (933)
T ss_pred e----------------------------------------------------------------------ccCCeEEEE
Confidence 3 367888888
Q ss_pred eCCCCceeEEEecc-cccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCc
Q psy15549 397 DTQHASPFAFIANI-HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKP 475 (621)
Q Consensus 397 d~~~~~~~~~~~~~-h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 475 (621)
+..+......+... +...+.++.|+|.|+|||+++.||.|.|||+++-+. ......+.+..|.|.+..+-.....
T Consensus 216 ~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p~~n~it~~~~~ 291 (933)
T KOG1274|consen 216 SRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER----HEFKRAVCCEAWKPNANAITLITAL 291 (933)
T ss_pred ccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchh----ccccceeEEEecCCCCCeeEEEeec
Confidence 88888877776543 334499999999999999999999999999998222 3345567888888888765554444
Q ss_pred ccHHHh
Q psy15549 476 RSAEQA 481 (621)
Q Consensus 476 ~~~~~w 481 (621)
|...+|
T Consensus 292 g~~~~~ 297 (933)
T KOG1274|consen 292 GTLGVS 297 (933)
T ss_pred cccccC
Confidence 444443
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-24 Score=188.85 Aligned_cols=288 Identities=15% Similarity=0.199 Sum_probs=214.0
Q ss_pred CccccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccc
Q psy15549 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRH 80 (621)
Q Consensus 1 m~~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h 80 (621)
|.....++...-++.|.+|.|+|.+. .|++++.||.++ +|++....... .-.|
T Consensus 1 ~~~~~~~l~npP~d~IS~v~f~~~~~-----~LLvssWDgslr--------------lYdv~~~~l~~--------~~~~ 53 (323)
T KOG1036|consen 1 MSPNEFELENPPEDGISSVKFSPSSS-----DLLVSSWDGSLR--------------LYDVPANSLKL--------KFKH 53 (323)
T ss_pred CCccccccCCCChhceeeEEEcCcCC-----cEEEEeccCcEE--------------EEeccchhhhh--------heec
Confidence 34444556666688999999999887 888889999999 77776653322 3458
Q ss_pred cCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 81 QKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
..++.+++|.++.+.+..+.|+.|+.+|+..+. ...+..|..+|.||.+++....+++|+.|++|++||.+.
T Consensus 54 ~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~--------~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~ 125 (323)
T KOG1036|consen 54 GAPLLDCAFADESTIVTGGLDGQVRRYDLNTGN--------EDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRN 125 (323)
T ss_pred CCceeeeeccCCceEEEeccCceEEEEEecCCc--------ceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccc
Confidence 899999999986665555559999999999863 344667999999999999888999999999999999987
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec--cCCcceE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT--EHKKFVQ 238 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~ 238 (621)
......+ .....|.++..+ ++.|++|+.+..+.+||+++.....+.+ ...-.++
T Consensus 126 ~~~~~~~----------------------d~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR 181 (323)
T KOG1036|consen 126 KVVVGTF----------------------DQGKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTR 181 (323)
T ss_pred ccccccc----------------------ccCceEEEEecc--CCEEEEeecCceEEEEEcccccchhhhccccceeEEE
Confidence 5443222 233478888875 6689999999999999999876544332 3455789
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCceee----eecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeE
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVI----SRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL 314 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l 314 (621)
|+++-|++.-+++++-||.|.+=.+...... ..+..|. -+.++..+
T Consensus 182 ~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr------------------------------~~~~~~~~ 231 (323)
T KOG1036|consen 182 CVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHR------------------------------LSEKDTEI 231 (323)
T ss_pred EEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeee------------------------------cccCCceE
Confidence 9999998888899999999887666554211 1111111 11111111
Q ss_pred EeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEE
Q psy15549 315 IAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNIL 394 (621)
Q Consensus 315 ~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 394 (621)
+ .+++++.|+| -.+.+++|+.||.|.
T Consensus 232 ~--------------------------------------yPVNai~Fhp----------------~~~tfaTgGsDG~V~ 257 (323)
T KOG1036|consen 232 I--------------------------------------YPVNAIAFHP----------------IHGTFATGGSDGIVN 257 (323)
T ss_pred E--------------------------------------EEeceeEecc----------------ccceEEecCCCceEE
Confidence 1 2345555655 236688888999999
Q ss_pred EEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeC
Q psy15549 395 LYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASST 432 (621)
Q Consensus 395 iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~ 432 (621)
+||+.+.+.+..+.. ....|.+++|+.||..||+++.
T Consensus 258 ~Wd~~~rKrl~q~~~-~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 258 IWDLFNRKRLKQLAK-YETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred EccCcchhhhhhccC-CCCceEEEEeccCCCeEEEEec
Confidence 999999998888854 4567999999999999999874
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-24 Score=206.80 Aligned_cols=282 Identities=13% Similarity=0.141 Sum_probs=200.4
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEE-EEc-CCceEEEEe
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLA-SGD-DVGKEIWYL 109 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~la-s~~-d~~v~iw~~ 109 (621)
.+++++.|+.|. +||+.+++... .+..+ ..+.+++|+|+|+.++ +++ ++.+++|+.
T Consensus 3 ~~~s~~~d~~v~--------------~~d~~t~~~~~-------~~~~~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~ 60 (300)
T TIGR03866 3 AYVSNEKDNTIS--------------VIDTATLEVTR-------TFPVG-QRPRGITLSKDGKLLYVCASDSDTIQVIDL 60 (300)
T ss_pred EEEEecCCCEEE--------------EEECCCCceEE-------EEECC-CCCCceEECCCCCEEEEEECCCCeEEEEEC
Confidence 789999999999 88887654322 24444 3467899999999764 444 778999998
Q ss_pred ccCccccccceecccccccCCCeEEEEECCCCCEEEEE-eCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeee
Q psy15549 110 TERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG-DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL 188 (621)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~-s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (621)
..+ .....+..+. .+..++|+|+++.++++ +.++.|++||+.+.+.+. .+
T Consensus 61 ~~~-------~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~---------------------~~ 111 (300)
T TIGR03866 61 ATG-------EVIGTLPSGP-DPELFALHPNGKILYIANEDDNLVTVIDIETRKVLA---------------------EI 111 (300)
T ss_pred CCC-------cEEEeccCCC-CccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEe---------------------Ee
Confidence 875 3333343333 35678999999977654 568999999998765432 22
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCC-eEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEe-CCCcEEEEEccCc
Q psy15549 189 RGHLEDVYDISWSPTSTHLISGSVDN-TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQSK 266 (621)
Q Consensus 189 ~~~~~~v~~i~~spd~~~l~s~~~dg-~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~ 266 (621)
. +...+.+++|+|++.++++++.++ .+.+||..+++....+.. ...+.+++|+|++++|++++ .++.|++||+.++
T Consensus 112 ~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~ 189 (300)
T TIGR03866 112 P-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLV-DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATR 189 (300)
T ss_pred e-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEc-CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcc
Confidence 2 223467899999999999988765 567889988877655432 33457899999999886554 5899999999998
Q ss_pred eeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCc
Q psy15549 267 KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPA 346 (621)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 346 (621)
+.+..+........ ........++|+|++++++++.
T Consensus 190 ~~~~~~~~~~~~~~----------------~~~~~~~~i~~s~dg~~~~~~~---------------------------- 225 (300)
T TIGR03866 190 KVIKKITFEIPGVH----------------PEAVQPVGIKLTKDGKTAFVAL---------------------------- 225 (300)
T ss_pred eeeeeeeecccccc----------------cccCCccceEECCCCCEEEEEc----------------------------
Confidence 77665532110000 0001124577788887755432
Q ss_pred eecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCe
Q psy15549 347 VCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKV 426 (621)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~ 426 (621)
+.++.|.+||..+++.+..+. +...+.+++|+|+|++
T Consensus 226 -----------------------------------------~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~ 262 (300)
T TIGR03866 226 -----------------------------------------GPANRVAVVDAKTYEVLDYLL--VGQRVWQLAFTPDEKY 262 (300)
T ss_pred -----------------------------------------CCCCeEEEEECCCCcEEEEEE--eCCCcceEEECCCCCE
Confidence 234578999998888776553 3457899999999999
Q ss_pred EEEE-eCCCcEEEEEecCCcCCcccCCC
Q psy15549 427 LIAS-STDGYCSIISFGDNEIGIPYVPP 453 (621)
Q Consensus 427 l~s~-s~dg~i~iw~~~~~~~~~~~~~~ 453 (621)
|+++ +.+|.|++||+.+++....+...
T Consensus 263 l~~~~~~~~~i~v~d~~~~~~~~~~~~~ 290 (300)
T TIGR03866 263 LLTTNGVSNDVSVIDVAALKVIKSIKVG 290 (300)
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcc
Confidence 9886 46899999999999987777653
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-24 Score=188.00 Aligned_cols=278 Identities=18% Similarity=0.282 Sum_probs=210.2
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEec
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLT 110 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~ 110 (621)
.|++|+....|.-|++.....- ........+.+.-.+..|.+.|++++.+ |.++|+|+ |.+|+|||+.
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~---------~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~ 71 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKG---------CTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMR 71 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccc---------cccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEecc
Confidence 6788888888875544432200 0011112334455678999999999986 89999998 9999999999
Q ss_pred cCccccccceecccccccCCCeEEEEECCCCC--EEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeee
Q psy15549 111 ERESGIANVEFASDLSRHQKAVNVVRFSPNGE--LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL 188 (621)
Q Consensus 111 ~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~--~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (621)
.. .....+..|.+.|+++.|.++-. .|++|+.||.|.+|+...-. +...+
T Consensus 72 k~-------~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~---------------------~~~sl 123 (362)
T KOG0294|consen 72 KR-------KQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWE---------------------LLKSL 123 (362)
T ss_pred ch-------hhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeE---------------------Eeeee
Confidence 87 66777888999999999998665 89999999999999976654 45888
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCcee
Q psy15549 189 RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV 268 (621)
Q Consensus 189 ~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 268 (621)
.+|.+.|+.++.+|.+++.++.+.|+.+++||+-+|+.-..++-. ...+.+.|+|.|.+++.++.+ .|-||.+.+...
T Consensus 124 K~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~-~~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v 201 (362)
T KOG0294|consen 124 KAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK-NKATLVSWSPQGDHFVVSGRN-KIDIYQLDNASV 201 (362)
T ss_pred cccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC-CcceeeEEcCCCCEEEEEecc-EEEEEecccHhH
Confidence 999999999999999999999999999999999998876655432 223459999999999888766 488999887665
Q ss_pred eeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCcee
Q psy15549 269 ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVC 348 (621)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~ 348 (621)
...+... ..+.++.|- ++.+|++|. .+..+..||... ..+...
T Consensus 202 ~~~i~~~------------------------~r~l~~~~l-~~~~L~vG~-----d~~~i~~~D~ds-------~~~~~~ 244 (362)
T KOG0294|consen 202 FREIENP------------------------KRILCATFL-DGSELLVGG-----DNEWISLKDTDS-------DTPLTE 244 (362)
T ss_pred hhhhhcc------------------------ccceeeeec-CCceEEEec-----CCceEEEeccCC-------Ccccee
Confidence 5544211 223555554 455677776 688888888664 455666
Q ss_pred cCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC
Q psy15549 349 LPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA 401 (621)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 401 (621)
+.+|...+..+.+-. .+.+.+|+++++||.|++||++..
T Consensus 245 ~~AH~~RVK~i~~~~--------------~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 245 FLAHENRVKDIASYT--------------NPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred eecchhheeeeEEEe--------------cCCceEEEEeccCceEEEEEcccc
Confidence 777887777765321 124478999999999999998876
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-24 Score=189.60 Aligned_cols=280 Identities=16% Similarity=0.178 Sum_probs=210.6
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEcc
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
...|.+|.|+|.+..|++++ |+.+++|++... .+...-.|..++.+++|.+ ...+++|+.||.|+++|+.
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~--------~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln 83 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN--------SLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLN 83 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccch--------hhhhheecCCceeeeeccC-CceEEEeccCceEEEEEec
Confidence 57899999999877666666 999999999875 2333446889999999987 4578999999999999999
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEE
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQG 239 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 239 (621)
++.. ..+..|...|.||.+++-...+++|+.|++|++||.+.......+.. ...|.+
T Consensus 84 ~~~~----------------------~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~ 140 (323)
T KOG1036|consen 84 TGNE----------------------DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYC 140 (323)
T ss_pred CCcc----------------------eeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEE
Confidence 9875 45678999999999999888999999999999999987655555543 347877
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccc
Q psy15549 240 VAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSG 319 (621)
Q Consensus 240 l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~ 319 (621)
+..+ |+.|++|+.|..|.+||+++.....+.. ...++-.++++++-|++.-+++++
T Consensus 141 ~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~q~r---------------------eS~lkyqtR~v~~~pn~eGy~~sS- 196 (323)
T KOG1036|consen 141 MDVS--GNRLVVGTSDRKVLIYDLRNLDEPFQRR---------------------ESSLKYQTRCVALVPNGEGYVVSS- 196 (323)
T ss_pred Eecc--CCEEEEeecCceEEEEEcccccchhhhc---------------------cccceeEEEEEEEecCCCceEEEe-
Confidence 7665 8899999999999999999876543322 234456779999999887777777
Q ss_pred cccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCC
Q psy15549 320 CLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQ 399 (621)
Q Consensus 320 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 399 (621)
.+|.+.+-.+... ......-.+..+++.. .+++
T Consensus 197 ----ieGRVavE~~d~s-------------~~~~skkyaFkCHr~~-----------------------~~~~------- 229 (323)
T KOG1036|consen 197 ----IEGRVAVEYFDDS-------------EEAQSKKYAFKCHRLS-----------------------EKDT------- 229 (323)
T ss_pred ----ecceEEEEccCCc-------------hHHhhhceeEEeeecc-----------------------cCCc-------
Confidence 5555544322210 0000000111111100 0000
Q ss_pred CCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCC
Q psy15549 400 HASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSED 473 (621)
Q Consensus 400 ~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 473 (621)
.-.-+|++|+|+|--+.||||+.||.|.+||+.+.+.+..+..-...+..+.|+.+|..++.++
T Consensus 230 ----------~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 230 ----------EIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIAS 293 (323)
T ss_pred ----------eEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEe
Confidence 0113799999999999999999999999999999999999988888899999999999887654
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=218.25 Aligned_cols=300 Identities=17% Similarity=0.299 Sum_probs=213.9
Q ss_pred cCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEc
Q psy15549 11 HNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 90 (621)
Q Consensus 11 ~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 90 (621)
+-+....+|+..++-. .++.++.. .+.+|.+........+++.+-. . ..-.-.+..|.|.
T Consensus 37 ~~k~~~nAIs~nr~~~-----qiv~AGrs-~lklyai~~~~~~~~~~~~~k~-k-------------qn~~~S~~DVkW~ 96 (839)
T KOG0269|consen 37 KLKAKANAISVNRDIN-----QIVVAGRS-LLKLYAINPNDFSEKCNHRFKT-K-------------QNKFYSAADVKWG 96 (839)
T ss_pred ecccccceEeecCCcc-----eeEEeccc-ceeeEeeCcccCCcceeeeccc-c-------------cceeeehhhcccc
Confidence 3456778888888876 77777654 4554444333322222222200 0 0111245667787
Q ss_pred c-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 91 P-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 91 p-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
. +.++||+++ .+.|.+||+...... +.+..+..|+..|+++.|++ ...+|++|+.||+|++||++......
T Consensus 97 ~~~~NlIAT~s~nG~i~vWdlnk~~rn----k~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~-- 170 (839)
T KOG0269|consen 97 QLYSNLIATCSTNGVISVWDLNKSIRN----KLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKS-- 170 (839)
T ss_pred cchhhhheeecCCCcEEEEecCccccc----hhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccc--
Confidence 5 568899988 777999999873211 55667889999999999998 55699999999999999999988753
Q ss_pred CCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCC-cEEEEeccCCcceEEEEEcCC
Q psy15549 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKG-KNLGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~l~~sp~ 245 (621)
.+.+....|+.+.|+| .+..|+++...|.+++||++.. ++...+.+|.++|.|+.|+|+
T Consensus 171 -------------------t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPn 231 (839)
T KOG0269|consen 171 -------------------TFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPN 231 (839)
T ss_pred -------------------cccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCC
Confidence 3456778899999999 6788999999999999999864 456778899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCC
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSD 325 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d 325 (621)
+.+||+|+.|+.|+|||+.+.+....... ....++.++.|-|+..+.++.+.
T Consensus 232 r~~lATGGRDK~vkiWd~t~~~~~~~~tI----------------------nTiapv~rVkWRP~~~~hLAtcs------ 283 (839)
T KOG0269|consen 232 REWLATGGRDKMVKIWDMTDSRAKPKHTI----------------------NTIAPVGRVKWRPARSYHLATCS------ 283 (839)
T ss_pred CceeeecCCCccEEEEeccCCCccceeEE----------------------eecceeeeeeeccCccchhhhhh------
Confidence 99999999999999999976543222211 11235688999998775554331
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA 405 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 405 (621)
...|-.|+|||++..-.-.
T Consensus 284 -------------------------------------------------------------mv~dtsV~VWDvrRPYIP~ 302 (839)
T KOG0269|consen 284 -------------------------------------------------------------MVVDTSVHVWDVRRPYIPY 302 (839)
T ss_pred -------------------------------------------------------------ccccceEEEEeeccccccc
Confidence 1145677778777765444
Q ss_pred EEecccccceEEEEEcC-CCCeEEEEeCCCcEEEEEecCC
Q psy15549 406 FIANIHYTKLTDITWSS-DGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 406 ~~~~~h~~~v~~~~~sp-dg~~l~s~s~dg~i~iw~~~~~ 444 (621)
.....|...++.++|.. |-..|.+++.||+|..-.++++
T Consensus 303 ~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~kna 342 (839)
T KOG0269|consen 303 ATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKNA 342 (839)
T ss_pred eeeeccCccccceeccCCCceeeEeecCccHHHHhhhhcc
Confidence 44355888888888855 3446777888877765555443
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-24 Score=187.02 Aligned_cols=287 Identities=18% Similarity=0.322 Sum_probs=214.0
Q ss_pred CccccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccc
Q psy15549 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRH 80 (621)
Q Consensus 1 m~~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h 80 (621)
|...+..+...|++-|.|+.|.+.|+ ++|+|+.|+.|+ |||...... .+......+.|
T Consensus 1 ~~~s~~pi~s~h~DlihdVs~D~~GR-----RmAtCSsDq~vk--------------I~d~~~~s~---~W~~Ts~Wrah 58 (361)
T KOG2445|consen 1 MDFSMAPIDSGHKDLIHDVSFDFYGR-----RMATCSSDQTVK--------------IWDSTSDSG---TWSCTSSWRAH 58 (361)
T ss_pred CCccccccccCCcceeeeeeecccCc-----eeeeccCCCcEE--------------EEeccCCCC---ceEEeeeEEec
Confidence 44567788889999999999999999 999999999999 777644333 45566678999
Q ss_pred cCcEEEEEEcc--CCCEEEEEc-CCceEEEEeccCc--cccccceecccccccCCCeEEEEECC--CCCEEEEEeCCCcE
Q psy15549 81 QKAVNVVRFSP--NGELLASGD-DVGKEIWYLTERE--SGIANVEFASDLSRHQKAVNVVRFSP--NGELLASGDDESTI 153 (621)
Q Consensus 81 ~~~V~~l~~sp--dg~~las~~-d~~v~iw~~~~~~--~~~~~~~~~~~~~~h~~~V~~i~~sp--~g~~l~s~s~dg~i 153 (621)
.+.|..+.|.+ -|+.+|+++ |+++.||.-.... .....+.....+......|+.++|.| -|-.||+++.||.|
T Consensus 59 ~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~l 138 (361)
T KOG2445|consen 59 DGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGIL 138 (361)
T ss_pred CCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEE
Confidence 99999999976 589999999 9999999874322 22234556677888889999999999 46789999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeee-------cCCCCCeEEEEECCC---CCEEEEEeCC-----CeEEE
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL-------RGHLEDVYDISWSPT---STHLISGSVD-----NTAIM 218 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~i~~spd---~~~l~s~~~d-----g~i~v 218 (621)
|||+....-.+.. |.+...+ ..+.....|+.|+|. ..+||+|+.+ +.++|
T Consensus 139 RIYEA~dp~nLs~---------------W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~I 203 (361)
T KOG2445|consen 139 RIYEAPDPMNLSQ---------------WTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKI 203 (361)
T ss_pred EEEecCCcccccc---------------chhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEE
Confidence 9998766544322 2222222 256778899999984 3678888865 57888
Q ss_pred EECCCC----cEEEEeccCCcceEEEEEcCCC----CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccc-cc
Q psy15549 219 WDVHKG----KNLGILTEHKKFVQGVAWDPKN----QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFD-KV 289 (621)
Q Consensus 219 wd~~~~----~~~~~~~~~~~~v~~l~~sp~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 289 (621)
|....+ ..+..+.+|..+|+.++|.|+- ..||+++.|| |+||.+......-.-.. +.......+ ..
T Consensus 204 ye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee----~~~~~~~~~l~v 278 (361)
T KOG2445|consen 204 YEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEE----VLAPDLMTDLPV 278 (361)
T ss_pred EEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhc----ccCCCCccccce
Confidence 876543 3455677899999999999963 4699999999 99999875321100000 001111111 12
Q ss_pred ccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeee
Q psy15549 290 VPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 290 ~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
..+.....|++.+..+.|+-.|..|++.+ .||.+++|...
T Consensus 279 ~~vs~~~~H~~~VWrv~wNmtGtiLsStG-----dDG~VRLWkan 318 (361)
T KOG2445|consen 279 EKVSELDDHNGEVWRVRWNMTGTILSSTG-----DDGCVRLWKAN 318 (361)
T ss_pred EEeeeccCCCCceEEEEEeeeeeEEeecC-----CCceeeehhhh
Confidence 22345678899999999999999999988 89999999764
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-24 Score=187.46 Aligned_cols=295 Identities=16% Similarity=0.235 Sum_probs=213.4
Q ss_pred eEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCE
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGEL 95 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~ 95 (621)
-.|+.|++-|. +||+|+.||.|. |||+.+... .+.+.+|..+|.+++||+||+.
T Consensus 26 a~~~~Fs~~G~-----~lAvGc~nG~vv--------------I~D~~T~~i-------ar~lsaH~~pi~sl~WS~dgr~ 79 (405)
T KOG1273|consen 26 AECCQFSRWGD-----YLAVGCANGRVV--------------IYDFDTFRI-------ARMLSAHVRPITSLCWSRDGRK 79 (405)
T ss_pred cceEEeccCcc-----eeeeeccCCcEE--------------EEEccccch-------hhhhhccccceeEEEecCCCCE
Confidence 78999999998 999999999999 999987764 3459999999999999999999
Q ss_pred EEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCC-CEEEEEeCCCcEEEEEccCCCCCCCCCCCCcc
Q psy15549 96 LASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDESTIIVWKQKTDQDLPEFPSSNLD 173 (621)
Q Consensus 96 las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~ 173 (621)
|++++ |..+.+||+..+ .+++.+ ....+|+.+.|+|.. +..+.+-.+..-.+-++...... .++..
T Consensus 80 LltsS~D~si~lwDl~~g-------s~l~ri-rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~-~Lp~d--- 147 (405)
T KOG1273|consen 80 LLTSSRDWSIKLWDLLKG-------SPLKRI-RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS-VLPKD--- 147 (405)
T ss_pred eeeecCCceeEEEeccCC-------CceeEE-EccCccceeeeccccCCeEEEEEecCCcEEEEecCCcee-eccCC---
Confidence 99999 999999999988 444443 346789999999943 34444444444555555542211 00000
Q ss_pred cccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCC-cceEEEEEcCCCCEEEEE
Q psy15549 174 EENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHK-KFVQGVAWDPKNQYVATL 252 (621)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~v~~l~~sp~~~~l~s~ 252 (621)
.-..-.....+..|.+.|+++++|...|.+.+||..+.+++..++-.. ..|..+.|+-.|++|+.-
T Consensus 148 -------------~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiN 214 (405)
T KOG1273|consen 148 -------------DDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIIN 214 (405)
T ss_pred -------------CccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEe
Confidence 000011112334688999999999999999999999999998887665 789999999999999999
Q ss_pred eCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCccee
Q psy15549 253 SSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPIS 332 (621)
Q Consensus 253 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~ 332 (621)
+.|..||.|+++.--... ....+...+. +..--.+..-.+++||.+|.|+++++.
T Consensus 215 tsDRvIR~ye~~di~~~~----r~~e~e~~~K--------~qDvVNk~~Wk~ccfs~dgeYv~a~s~------------- 269 (405)
T KOG1273|consen 215 TSDRVIRTYEISDIDDEG----RDGEVEPEHK--------LQDVVNKLQWKKCCFSGDGEYVCAGSA------------- 269 (405)
T ss_pred cCCceEEEEehhhhcccC----ccCCcChhHH--------HHHHHhhhhhhheeecCCccEEEeccc-------------
Confidence 999999999986321100 0000000000 000111223357788888888876651
Q ss_pred eeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccc
Q psy15549 333 VTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHY 412 (621)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~ 412 (621)
....++||....|..++.+.+...
T Consensus 270 --------------------------------------------------------~aHaLYIWE~~~GsLVKILhG~kg 293 (405)
T KOG1273|consen 270 --------------------------------------------------------RAHALYIWEKSIGSLVKILHGTKG 293 (405)
T ss_pred --------------------------------------------------------cceeEEEEecCCcceeeeecCCch
Confidence 346799999999999998865444
Q ss_pred cceEEEEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 413 TKLTDITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 413 ~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
....++.|+|-...+++- ..|.|++|....
T Consensus 294 E~l~DV~whp~rp~i~si-~sg~v~iw~~~~ 323 (405)
T KOG1273|consen 294 EELLDVNWHPVRPIIASI-ASGVVYIWAVVQ 323 (405)
T ss_pred hheeecccccceeeeeec-cCCceEEEEeec
Confidence 678899999998888887 789999999764
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-24 Score=189.21 Aligned_cols=301 Identities=16% Similarity=0.192 Sum_probs=204.7
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
.+-+|.+.|++|+|+.||+ +|||++.|+.|+ ||++.+-..... ..++ ..-.-+.-+.+
T Consensus 81 ~LKgH~~~vt~~~FsSdGK-----~lat~~~Dr~Ir--------------~w~~~DF~~~eH--r~~R-~nve~dhpT~V 138 (420)
T KOG2096|consen 81 VLKGHKKEVTDVAFSSDGK-----KLATISGDRSIR--------------LWDVRDFENKEH--RCIR-QNVEYDHPTRV 138 (420)
T ss_pred hhhccCCceeeeEEcCCCc-----eeEEEeCCceEE--------------EEecchhhhhhh--hHhh-ccccCCCceEE
Confidence 4567899999999999999 999999999999 888775332110 0010 01112356788
Q ss_pred EEccCCCEEEEEc--CCceEEEEeccCccccccceecc-----cccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 88 RFSPNGELLASGD--DVGKEIWYLTERESGIANVEFAS-----DLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 88 ~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~-----~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
.|+||.+.++... .+.+++|.+.....+.-.+..+. .-..|.-.|..+-...++.+|++++.|..|.+|++.
T Consensus 139 ~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk- 217 (420)
T KOG2096|consen 139 VFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK- 217 (420)
T ss_pred EECCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-
Confidence 9999998776654 66788888765443222211111 223466778788888889999999999999999998
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC---C-----cEEEEecc
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK---G-----KNLGILTE 232 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~---~-----~~~~~~~~ 232 (621)
++.+.. .......-+..+.||+|+++++++..-.|++|.+-- | ..+..+++
T Consensus 218 Gq~L~~---------------------idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkG 276 (420)
T KOG2096|consen 218 GQLLQS---------------------IDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKG 276 (420)
T ss_pred Cceeee---------------------eccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheecc
Confidence 655433 334444557789999999999999999999998732 2 24567889
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceee----eecccCCCCCCCccccccccccccccCCcccceeeeeec
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVI----SRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 308 (621)
|...|..++|+++...+++.+.||+++|||..-.... ..+.....+. ....+.-..+.++
T Consensus 277 H~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl----------------~aag~~p~RL~ls 340 (420)
T KOG2096|consen 277 HQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPL----------------HAAGSEPVRLELS 340 (420)
T ss_pred chhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcch----------------hhcCCCceEEEeC
Confidence 9999999999999999999999999999998643221 1111111111 1111222489999
Q ss_pred CCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE
Q psy15549 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA 388 (621)
Q Consensus 309 pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (621)
|.|+.|+++.+ ..++++..... ......-..|...+.++.|.+ +|++++++
T Consensus 341 P~g~~lA~s~g------s~l~~~~se~g------~~~~~~e~~h~~~Is~is~~~----------------~g~~~atc- 391 (420)
T KOG2096|consen 341 PSGDSLAVSFG------SDLKVFASEDG------KDYPELEDIHSTTISSISYSS----------------DGKYIATC- 391 (420)
T ss_pred CCCcEEEeecC------CceEEEEcccC------ccchhHHHhhcCceeeEEecC----------------CCcEEeee-
Confidence 99999998763 44555544321 112222345677788888876 55655555
Q ss_pred cCCcEEEEe
Q psy15549 389 TENNILLYD 397 (621)
Q Consensus 389 ~dg~i~iwd 397 (621)
.|..++++.
T Consensus 392 Gdr~vrv~~ 400 (420)
T KOG2096|consen 392 GDRYVRVIR 400 (420)
T ss_pred cceeeeeec
Confidence 456666654
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-24 Score=188.72 Aligned_cols=260 Identities=16% Similarity=0.240 Sum_probs=195.3
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
-++...-.+.|.+|+|||... .++++|+-||.|| +|++....... -.....|.++|.
T Consensus 20 ~ev~~pP~DsIS~l~FSP~~~----~~~~A~SWD~tVR--------------~wevq~~g~~~-----~ka~~~~~~PvL 76 (347)
T KOG0647|consen 20 YEVPNPPEDSISALAFSPQAD----NLLAAGSWDGTVR--------------IWEVQNSGQLV-----PKAQQSHDGPVL 76 (347)
T ss_pred eecCCCcccchheeEeccccC----ceEEecccCCceE--------------EEEEecCCccc-----chhhhccCCCeE
Confidence 345556678999999999544 4777999999999 88888742211 134678999999
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCC--EEEEEeCCCcEEEEEccCCC
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE--LLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~--~l~s~s~dg~i~vwd~~~~~ 162 (621)
+++|+.||..+++|+ |+.+++||+..+ ....+..|.++|.++.|-+... .|++|+-|.+|+.||.+...
T Consensus 77 ~v~WsddgskVf~g~~Dk~~k~wDL~S~--------Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~ 148 (347)
T KOG0647|consen 77 DVCWSDDGSKVFSGGCDKQAKLWDLASG--------QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN 148 (347)
T ss_pred EEEEccCCceEEeeccCCceEEEEccCC--------CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCC
Confidence 999999999998887 999999999986 2456678999999999988655 89999999999999999888
Q ss_pred CCCCCCCCCccc--c------------------cccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC
Q psy15549 163 DLPEFPSSNLDE--E------------------NVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH 222 (621)
Q Consensus 163 ~~~~~~~~~~~~--~------------------~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~ 222 (621)
++..+.-+.-.. . ......-+.......-.-.++|++..+|....+.|+-.|.+-|..+.
T Consensus 149 pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id 228 (347)
T KOG0647|consen 149 PVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYID 228 (347)
T ss_pred eeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecC
Confidence 776653322100 0 00000000111112233468899999988888999999999999998
Q ss_pred CC--cEEEEeccCC---------cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccccc
Q psy15549 223 KG--KNLGILTEHK---------KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVP 291 (621)
Q Consensus 223 ~~--~~~~~~~~~~---------~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (621)
.+ +.-.+|+-|. ..|.+++|+|.-..|++++.||++.+||-.....+....
T Consensus 229 ~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~------------------ 290 (347)
T KOG0647|consen 229 DPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSE------------------ 290 (347)
T ss_pred CCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccC------------------
Confidence 76 3334454444 257889999998999999999999999987766555443
Q ss_pred ccccCCcccceeeeeecCCCCeEEeccc
Q psy15549 292 LFHDDTMKSFFRRLTFSPDGQLLIAPSG 319 (621)
Q Consensus 292 ~~~~~~~~~~i~~~~~spdg~~l~~~s~ 319 (621)
.+..+|++..|+.+|.+++.+.+
T Consensus 291 -----~~~qpItcc~fn~~G~ifaYA~g 313 (347)
T KOG0647|consen 291 -----THPQPITCCSFNRNGSIFAYALG 313 (347)
T ss_pred -----cCCCccceeEecCCCCEEEEEee
Confidence 45567799999999999988764
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.8e-25 Score=212.00 Aligned_cols=282 Identities=20% Similarity=0.253 Sum_probs=229.2
Q ss_pred eeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEE-EEECC-CCCEEEEE
Q psy15549 71 VEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNV-VRFSP-NGELLASG 147 (621)
Q Consensus 71 ~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~-i~~sp-~g~~l~s~ 147 (621)
+++...+.+|...|..+++.+.. .+++++ |+++++|.-..+. +...+.+.+|.+.|.. ++|.+ ++-.|++|
T Consensus 4 Y~ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~-----~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g 77 (745)
T KOG0301|consen 4 YKLSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQ-----YLETHAFEGPKGFIANSICYAESDKGRLVVG 77 (745)
T ss_pred ceeEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCcc-----cccceecccCcceeeccceeccccCcceEee
Confidence 44566799999999999877665 566666 9999999987663 2445667788888887 88886 44579999
Q ss_pred eCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Q psy15549 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL 227 (621)
Q Consensus 148 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~ 227 (621)
+.|++|.+|...+..+. ..+.+|...|+|+....++. +++||.|.++++|-+ +++.
T Consensus 78 ~~D~~i~v~~~~~~~P~---------------------~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~ 133 (745)
T KOG0301|consen 78 GMDTTIIVFKLSQAEPL---------------------YTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELV 133 (745)
T ss_pred cccceEEEEecCCCCch---------------------hhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhh
Confidence 99999999999988865 66789999999999888887 999999999999965 6677
Q ss_pred EEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 228 GILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
..+.+|...|.++++-|.+ .++||+.|.+|++|.- ++.++++.+| ...|+++++
T Consensus 134 ~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gH-----------------------tD~VRgL~v 187 (745)
T KOG0301|consen 134 YSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGH-----------------------TDCVRGLAV 187 (745)
T ss_pred cccCCcchheeeeeecCCC-cEEeccCcceeeeccC--Cchhhhhccc-----------------------hhheeeeEE
Confidence 7899999999999999988 7889999999999984 6666666533 344566665
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
-+++ .++++
T Consensus 188 l~~~-----------------------------------------------------------------------~flSc 196 (745)
T KOG0301|consen 188 LDDS-----------------------------------------------------------------------HFLSC 196 (745)
T ss_pred ecCC-----------------------------------------------------------------------CeEee
Confidence 5443 35566
Q ss_pred EcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCC
Q psy15549 388 ATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGE 467 (621)
Q Consensus 388 ~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (621)
+.||.|++|++ +++.+..+ .+|.+-|.++...+++..+++++.|++++||+.. ++.+.+..|...+.++..-+.|.
T Consensus 197 sNDg~Ir~w~~-~ge~l~~~-~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD 272 (745)
T KOG0301|consen 197 SNDGSIRLWDL-DGEVLLEM-HGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD 272 (745)
T ss_pred cCCceEEEEec-cCceeeee-eccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCC
Confidence 78999999999 77777777 4699999999988888999999999999999987 88888888888888777766654
Q ss_pred CcccCCCcccHHHhccc
Q psy15549 468 PVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 468 ~~~s~~~~~~~~~w~~~ 484 (621)
++.++.||.+++|...
T Consensus 273 -Ivvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 273 -IVVGGSDGRVRVFTVD 288 (745)
T ss_pred -EEEeccCceEEEEEec
Confidence 5667788888887644
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-24 Score=200.99 Aligned_cols=286 Identities=16% Similarity=0.293 Sum_probs=217.6
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccc--ccCcEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSR--HQKAVNV 86 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~--h~~~V~~ 86 (621)
.+.|.+-|.++.+|...+ ++.||+. |.|+ |||+........ +..+.. ....|.+
T Consensus 415 tL~HGEvVcAvtIS~~tr-----hVyTgGk-gcVK--------------VWdis~pg~k~P----vsqLdcl~rdnyiRS 470 (705)
T KOG0639|consen 415 TLAHGEVVCAVTISNPTR-----HVYTGGK-GCVK--------------VWDISQPGNKSP----VSQLDCLNRDNYIRS 470 (705)
T ss_pred hhccCcEEEEEEecCCcc-----eeEecCC-CeEE--------------EeeccCCCCCCc----cccccccCcccceee
Confidence 455778899999999987 8888885 6788 888875532221 222322 3567999
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
+.+.|||+.|++|+ -.++.|||+..... .....+....-...+++.+||.+..++|..||.|.|||+.+...+
T Consensus 471 ckL~pdgrtLivGGeastlsiWDLAapTp-----rikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~V- 544 (705)
T KOG0639|consen 471 CKLLPDGRTLIVGGEASTLSIWDLAAPTP-----RIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLV- 544 (705)
T ss_pred eEecCCCceEEeccccceeeeeeccCCCc-----chhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceee-
Confidence 99999999999998 67799999987632 222333333446778899999999999999999999999998865
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~ 245 (621)
+.+.+|...+.||.+++||..|-+|+.|.+|+.||++++..+... .....|.++.++|+
T Consensus 545 --------------------rqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqh-dF~SQIfSLg~cP~ 603 (705)
T KOG0639|consen 545 --------------------RQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQH-DFSSQIFSLGYCPT 603 (705)
T ss_pred --------------------ecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhh-hhhhhheecccCCC
Confidence 677899999999999999999999999999999999998776544 24567999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCC
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSD 325 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d 325 (621)
+.+|++|-..+.+.+......+. . ....+.+.|.++.|.+.|+++++.+ .|
T Consensus 604 ~dWlavGMens~vevlh~skp~k-y-----------------------qlhlheScVLSlKFa~cGkwfvStG-----kD 654 (705)
T KOG0639|consen 604 GDWLAVGMENSNVEVLHTSKPEK-Y-----------------------QLHLHESCVLSLKFAYCGKWFVSTG-----KD 654 (705)
T ss_pred ccceeeecccCcEEEEecCCccc-e-----------------------eecccccEEEEEEecccCceeeecC-----ch
Confidence 99999999999988887654332 1 2335567789999999999999998 89
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeC
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDT 398 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 398 (621)
..+..|........ +.......+.+.. .+.++++|++|+.|..-.+|.+
T Consensus 655 nlLnawrtPyGasi--------FqskE~SsVlsCD----------------IS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 655 NLLNAWRTPYGASI--------FQSKESSSVLSCD----------------ISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred hhhhhccCccccce--------eeccccCcceeee----------------eccCceEEEecCCCcceEEEEE
Confidence 99999976532111 1111112222222 2347789999999988777764
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-22 Score=195.59 Aligned_cols=394 Identities=17% Similarity=0.229 Sum_probs=259.0
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
+.+..+-.+.|.+++|++.+ +|.+.+.+|.|. -||+.+.+.... +....+.|.
T Consensus 62 ~vi~g~~drsIE~L~W~e~~------RLFS~g~sg~i~--------------EwDl~~lk~~~~-------~d~~gg~IW 114 (691)
T KOG2048|consen 62 PVIHGPEDRSIESLAWAEGG------RLFSSGLSGSIT--------------EWDLHTLKQKYN-------IDSNGGAIW 114 (691)
T ss_pred EEEecCCCCceeeEEEccCC------eEEeecCCceEE--------------EEecccCceeEE-------ecCCCccee
Confidence 44556667789999999666 899999999999 999987766444 777889999
Q ss_pred EEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 86 VVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 86 ~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
+++.+|.+..++.|+|++ .++++..+.. .+.....+...++.|.++.|+|++..|+.|+.||.|++||+..+..+.
T Consensus 115 siai~p~~~~l~IgcddG-vl~~~s~~p~---~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~ 190 (691)
T KOG2048|consen 115 SIAINPENTILAIGCDDG-VLYDFSIGPD---KITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLH 190 (691)
T ss_pred EEEeCCccceEEeecCCc-eEEEEecCCc---eEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEE
Confidence 999999999999998666 3333333211 234455666678899999999999999999999999999999887653
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~ 245 (621)
... ..+...-.+...-|+++.|-.++ .|++|...|.|.+||...+..++.+..|.+.|.+++..++
T Consensus 191 ~~~-------------~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~ 256 (691)
T KOG2048|consen 191 IIT-------------MQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADN 256 (691)
T ss_pred Eee-------------ecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCC
Confidence 110 00001111234457888888665 7999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCceee------eecccCCCC--------C----------------------------CCcc
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVI------SRACRSKLP--------V----------------------------DSSH 283 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~------~~~~~~~~~--------~----------------------------~~~~ 283 (621)
++++++++.|+.|..|...+.+.. +.+..+... + +...
T Consensus 257 ~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~ 336 (691)
T KOG2048|consen 257 EDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIENALISGGRDFTLAICSSREFKNMDHRQKNLFPASD 336 (691)
T ss_pred CCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecceEEecceeeEEEEccccccCchhhhccccccccc
Confidence 999999999999888876655220 011111100 0 0000
Q ss_pred cc------------cccccccccc------------------CCcccceeeeeecCCCCeEEeccccccCCCCCCcceee
Q psy15549 284 EL------------FDKVVPLFHD------------------DTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISV 333 (621)
Q Consensus 284 ~~------------~~~~~~~~~~------------------~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~ 333 (621)
.. .+....+|.. ..-...|.+.+.||+|++++.+. -...++|.+
T Consensus 337 ~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st------~~~~~iy~L 410 (691)
T KOG2048|consen 337 RVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAIST------VSRTKIYRL 410 (691)
T ss_pred eeecCccceEEEEeccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEee------ccceEEEEe
Confidence 00 0011111111 01123478999999999999876 234444444
Q ss_pred eeee--eecccCCCceec----------CCcccceeee-eccceeeec----------------CCCCCCCCccCCCcEE
Q psy15549 334 THVF--TRACLNKPAVCL----------PSLQYYSVAV-KCCPVLFEL----------------KPSDDKPLFKLPYRIV 384 (621)
Q Consensus 334 ~~~~--~~~~~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~----------------~~~~~~~~~~~~~~~l 384 (621)
.... ...........+ ......+.+. .+.-..+.. .+.-...+.+++|+++
T Consensus 411 ~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yi 490 (691)
T KOG2048|consen 411 QPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYI 490 (691)
T ss_pred ccCcceeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEE
Confidence 3211 000000000000 0000000000 000000000 0111245567899999
Q ss_pred EEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcC-CCCeEEEEeCCCcEEEEEecCCcCCcccC
Q psy15549 385 IAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSS-DGKVLIASSTDGYCSIISFGDNEIGIPYV 451 (621)
Q Consensus 385 ~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~s~dg~i~iw~~~~~~~~~~~~ 451 (621)
++.+..|.|.+|++.+.+....... -...|+.++|+| +-..|+.+..|+.+.-||++...+.+...
T Consensus 491 aa~~t~g~I~v~nl~~~~~~~l~~r-ln~~vTa~~~~~~~~~~lvvats~nQv~efdi~~~~l~~ws~ 557 (691)
T KOG2048|consen 491 AAISTRGQIFVYNLETLESHLLKVR-LNIDVTAAAFSPFVRNRLVVATSNNQVFEFDIEARNLTRWSK 557 (691)
T ss_pred EEEeccceEEEEEcccceeecchhc-cCcceeeeeccccccCcEEEEecCCeEEEEecchhhhhhhhh
Confidence 9999999999999999875554422 337899999995 55689999999999999996655444433
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=9e-24 Score=202.52 Aligned_cols=414 Identities=19% Similarity=0.203 Sum_probs=286.3
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
...++..|.+-|+.+.|+|-.. .+||||+.|..|+ ||.+..+..... -.....+.+..-.|
T Consensus 71 ~i~~l~~H~d~VtDl~FspF~D----~LLAT~S~D~~VK--------------iW~lp~g~~q~L-Sape~~~g~~~~~v 131 (1012)
T KOG1445|consen 71 DIGILAAHGDQVTDLGFSPFAD----ELLATCSRDEPVK--------------IWKLPRGHSQKL-SAPEIDVGGGNVIV 131 (1012)
T ss_pred ccceeecccceeeccCccccch----hhhhcccCCCeeE--------------EEecCCCccccc-CCcceeecCCceEE
Confidence 4567888999999999999554 3999999999999 998884432211 11222344455678
Q ss_pred EEEEEccC-CCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 85 NVVRFSPN-GELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 85 ~~l~~spd-g~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
-|+.|+|. ..+|+++..+.+.|||+.+. +.+..+.+|...|.+..|+.||.+|++++.|..|+|||.+....
T Consensus 132 E~l~fHpTaDgil~s~a~g~v~i~D~stq-------k~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~~~ 204 (1012)
T KOG1445|consen 132 ECLRFHPTADGILASGAHGSVYITDISTQ-------KTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRASME 204 (1012)
T ss_pred EEeecccCcCceEEeccCceEEEEEcccC-------ceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccCCC
Confidence 99999995 45788888999999999988 67788999999999999999999999999999999999876643
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCC-eEEEEECCCCCEEEEEeCC----CeEEEEECCCC-cEEEEecc-CCcc
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLED-VYDISWSPTSTHLISGSVD----NTAIMWDVHKG-KNLGILTE-HKKF 236 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~spd~~~l~s~~~d----g~i~vwd~~~~-~~~~~~~~-~~~~ 236 (621)
. .+...+|.+. =.-+.|.-+-.+|++.+.+ ..|++||.+.. ..++++.- ....
T Consensus 205 p--------------------iQ~te~H~~~rdsRv~w~Gn~~rlisTGF~~~R~reV~~~Dtr~f~~p~~tleld~stG 264 (1012)
T KOG1445|consen 205 P--------------------IQTTEGHGGMRDSRVLWAGNWERLISTGFTTKRIREVRAYDTRKFGAPVHTLELDSSTG 264 (1012)
T ss_pred c--------------------cccccccccchhheeeeccchhhhhhcccchhhheeeeeeeccccCCcceeEEeecccc
Confidence 2 2344566543 2346676555567766654 57999998763 34444432 2234
Q ss_pred eEEEEEcCCCCEEEEEe-CCCcEEEEEccCceeee----------e------------------------cc--------
Q psy15549 237 VQGVAWDPKNQYVATLS-SDRSLRTYSIQSKKVIS----------R------------------------AC-------- 273 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~----------~------------------------~~-------- 273 (621)
|.---|.||.+.|+.++ .+..+.++.+...+..- + +.
T Consensus 265 vLiPl~DpDt~llfLaGKG~~~l~~lE~~d~qPyLs~v~~~tle~~~~GA~lvpkral~VM~~EV~rvlQLt~~~ivPi~ 344 (1012)
T KOG1445|consen 265 VLIPLYDPDTRLLFLAGKGTNKLFMLEMQDRQPYLSHVFELTLEEQTLGATLVPKRALHVMDGEVDRVLQLTKSSIVPIP 344 (1012)
T ss_pred eEeeeecCCCceEEEecCCcceEEEEEecCCCcchhhhhhhcchhhhccceecchhhhhhcchhhhhheecccCceeecc
Confidence 55566889888766444 46677777664332100 0 00
Q ss_pred -------------------------------------------------cCCC----CCC-----------------Ccc
Q psy15549 274 -------------------------------------------------RSKL----PVD-----------------SSH 283 (621)
Q Consensus 274 -------------------------------------------------~~~~----~~~-----------------~~~ 283 (621)
.+.. +++ ...
T Consensus 345 y~VPRksyrdFH~DLfPeT~G~~p~~~ageWlnG~Nq~vqKvSl~Pa~r~h~~~pp~~~P~p~~a~t~sf~~v~~ppaaP 424 (1012)
T KOG1445|consen 345 YIVPRKSYRDFHSDLFPETRGAEPGCTAGEWLNGTNQVVQKVSLAPAQRSHSPPPPEPVPTPKVAQTPSFVPVPTPPAAP 424 (1012)
T ss_pred cccchhhhhhhhhhhCccccCCccCcCccceecCccccccccccCchhccCCCCCCCCCCCcccccCCCCccccCCCCCC
Confidence 0000 000 000
Q ss_pred -------cc----cc---------------------------------------------------------cccccccc
Q psy15549 284 -------EL----FD---------------------------------------------------------KVVPLFHD 295 (621)
Q Consensus 284 -------~~----~~---------------------------------------------------------~~~~~~~~ 295 (621)
.. .+ ...++-..
T Consensus 425 ~~~~n~~~~~~~~Pd~~~qpaV~~~~e~r~l~~~~~E~~~g~~~~~~dad~~~g~sS~~s~~~~~~~~~~kP~S~plt~~ 504 (1012)
T KOG1445|consen 425 RPMSNNNSSSNNVPDVQEQPAVPKKEEVRELDYRPYEKENGVHTPNADADSTQGNSSPISTISPEPVTIVKPASTPLTDS 504 (1012)
T ss_pred CccccccccccCCCccccCCCcCcchhhhhhcccccccccCccCCCcccccccCCCCCccccCCCcccccCCCCcccccc
Confidence 00 00 00000000
Q ss_pred ----C---C-----------------------------------------------------------------------
Q psy15549 296 ----D---T----------------------------------------------------------------------- 297 (621)
Q Consensus 296 ----~---~----------------------------------------------------------------------- 297 (621)
. +
T Consensus 505 ~s~~s~~~P~~~ksvPe~~~~~~g~~~sat~~v~~s~s~r~~s~v~G~iSKFRH~~Gt~ghks~hi~NLrnln~~~PgEs 584 (1012)
T KOG1445|consen 505 VSTPSVVGPAFGKSVPEQPPVNFGKPISATNRVPLSQSVRPKSCVVGQISKFRHVDGTQGHKSAHISNLRNLNTRLPGES 584 (1012)
T ss_pred cccccccCccccccCCCCCCcccCCCccccccccccccccccceeeccchheeeccCccccchhhhhhhhcccccCCCcc
Confidence 0 0
Q ss_pred -----------------------------------------cccceeeeeecC-CCCeEEeccccccCCCCCCcceeeee
Q psy15549 298 -----------------------------------------MKSFFRRLTFSP-DGQLLIAPSGCLENSDSTRKPISVTH 335 (621)
Q Consensus 298 -----------------------------------------~~~~i~~~~~sp-dg~~l~~~s~~~~~~d~~i~~~~~~~ 335 (621)
....|+.+.|.| |...|++++ .|+.|++|.+..
T Consensus 585 nGfcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~-----ddg~i~lWr~~a 659 (1012)
T KOG1445|consen 585 NGFCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVAT-----DDGQINLWRLTA 659 (1012)
T ss_pred CceeeccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecc-----cCceEEEEEecc
Confidence 000126778888 557788888 899999999987
Q ss_pred eeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccce
Q psy15549 336 VFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKL 415 (621)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v 415 (621)
.-.......+...+..|...+..++|+|... ..+++++.|-+|++||+.+++....+ .+|.+.|
T Consensus 660 ~gl~e~~~tPe~~lt~h~eKI~slRfHPLAa---------------dvLa~asyd~Ti~lWDl~~~~~~~~l-~gHtdqI 723 (1012)
T KOG1445|consen 660 NGLPENEMTPEKILTIHGEKITSLRFHPLAA---------------DVLAVASYDSTIELWDLANAKLYSRL-VGHTDQI 723 (1012)
T ss_pred CCCCcccCCcceeeecccceEEEEEecchhh---------------hHhhhhhccceeeeeehhhhhhhhee-ccCcCce
Confidence 6666677788889999999999999999643 67888899999999999999988888 5799999
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEEecCCc-CCcccCCCCC-cccccCCCCCCCCcccCCCc----ccHHHhcccC
Q psy15549 416 TDITWSSDGKVLIASSTDGYCSIISFGDNE-IGIPYVPPSG-EESKENDPTKGEPVRSEDKP----RSAEQAKGEG 485 (621)
Q Consensus 416 ~~~~~spdg~~l~s~s~dg~i~iw~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~----~~~~~w~~~~ 485 (621)
.+++|||||+.+|+.+.||+|++|+-.+++ .++.-.++.+ ....+.|.-+|..++..+.| .++.+++.+.
T Consensus 724 f~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 724 FGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQT 799 (1012)
T ss_pred eEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhh
Confidence 999999999999999999999999988764 3333333322 23345677788877666544 3556665443
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.4e-23 Score=196.46 Aligned_cols=315 Identities=14% Similarity=0.200 Sum_probs=204.3
Q ss_pred EeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEE
Q psy15549 19 VDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS 98 (621)
Q Consensus 19 l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las 98 (621)
..|++-- .+...||.+..||.|. ++|.....-.. +-........|...|..+.|.|....|++
T Consensus 55 ~sFs~~~--n~eHiLavadE~G~i~--------------l~dt~~~~fr~-ee~~lk~~~aH~nAifDl~wapge~~lVs 117 (720)
T KOG0321|consen 55 DSFSAAP--NKEHILAVADEDGGII--------------LFDTKSIVFRL-EERQLKKPLAHKNAIFDLKWAPGESLLVS 117 (720)
T ss_pred ccccCCC--CccceEEEecCCCcee--------------eecchhhhcch-hhhhhcccccccceeEeeccCCCceeEEE
Confidence 5666532 2346999999999999 55554332210 00112346789999999999995556666
Q ss_pred Ec-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEEccCCCCC--CCC----CCC
Q psy15549 99 GD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWKQKTDQDL--PEF----PSS 170 (621)
Q Consensus 99 ~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd~~~~~~~--~~~----~~~ 170 (621)
++ |.++++||+..... .-...+.+|...|.+++|.|. ...|++|+.||.|.|||++-...- ..+ ...
T Consensus 118 asGDsT~r~Wdvk~s~l-----~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~ 192 (720)
T KOG0321|consen 118 ASGDSTIRPWDVKTSRL-----VGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGR 192 (720)
T ss_pred ccCCceeeeeeecccee-----ecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhcc
Confidence 65 99999999998721 222247899999999999994 458899999999999998765411 000 000
Q ss_pred CcccccccccceeeeeeecCCCCCeEE---EEECCCCCEEEEEeC-CCeEEEEECCCCcEEEEe--------ccC---Cc
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYD---ISWSPTSTHLISGSV-DNTAIMWDVHKGKNLGIL--------TEH---KK 235 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~---i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~~~--------~~~---~~ 235 (621)
...........-.-......+...|.+ +.+..|...||+++. |+.|+|||+++....... ..| ..
T Consensus 193 ~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~ 272 (720)
T KOG0321|consen 193 HNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSV 272 (720)
T ss_pred ccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCccccee
Confidence 000000000000001122345555555 556678889999888 999999999876544322 122 33
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
.+.++.....|.+|++.+.|+.|++|++.+...-.... +...........-..+|
T Consensus 273 G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~-------------------~sg~~~~sf~vks~lSp------ 327 (720)
T KOG0321|consen 273 GQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAE-------------------FSGKLNSSFYVKSELSP------ 327 (720)
T ss_pred eeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhh-------------------ccCcccceeeeeeecCC------
Confidence 57788888888998888889999999997643211000 00000000011112233
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
++.++++++.|...++
T Consensus 328 ----------------------------------------------------------------d~~~l~SgSsd~~ayi 343 (720)
T KOG0321|consen 328 ----------------------------------------------------------------DDCSLLSGSSDEQAYI 343 (720)
T ss_pred ----------------------------------------------------------------CCceEeccCCCcceee
Confidence 4556666667888888
Q ss_pred EeCCCCceeEEEecccccceEEEEEcCCC-CeEEEEeCCCcEEEEEecCC
Q psy15549 396 YDTQHASPFAFIANIHYTKLTDITWSSDG-KVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~~v~~~~~spdg-~~l~s~s~dg~i~iw~~~~~ 444 (621)
|.+.+.+.-..+..+|...|++++|.|.. .-++||++|..++||++..+
T Consensus 344 w~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 344 WVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred eeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence 88888775555557899999999998853 35888899999999999655
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-22 Score=178.63 Aligned_cols=279 Identities=16% Similarity=0.288 Sum_probs=195.4
Q ss_pred cccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC--CCCEEEEEeCCCcE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--NGELLASGDDESTI 153 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp--~g~~l~s~s~dg~i 153 (621)
-.+|.+-|.++.|.+-|+.+|+|+ |..++||+...... .+......+.|.+.|..+.|.+ -|+.+|+|+.|+++
T Consensus 9 ~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~---~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv 85 (361)
T KOG2445|consen 9 DSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSG---TWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTV 85 (361)
T ss_pred ccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCC---ceEEeeeEEecCCcEEEEEecCccccceEEEEecCCce
Confidence 367899999999999999999998 99999999855433 4466677888999999999976 68999999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEECCCCc------
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP--TSTHLISGSVDNTAIMWDVHKGK------ 225 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp--d~~~l~s~~~dg~i~vwd~~~~~------ 225 (621)
.||.-..... ......|.....+....+.|+.+.|.| -|-.||+++.||.++||+.-.--
T Consensus 86 ~iWEE~~~~~------------~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~ 153 (361)
T KOG2445|consen 86 SIWEEQEKSE------------EAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWT 153 (361)
T ss_pred eeeeeccccc------------ccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccch
Confidence 9997542211 122356888888999999999999999 56789999999999999875432
Q ss_pred EEEEec-------cCCcceEEEEEcCC---CCEEEEEeCC-----CcEEEEEccCce-eeeecccCCCCCCCcccccccc
Q psy15549 226 NLGILT-------EHKKFVQGVAWDPK---NQYVATLSSD-----RSLRTYSIQSKK-VISRACRSKLPVDSSHELFDKV 289 (621)
Q Consensus 226 ~~~~~~-------~~~~~v~~l~~sp~---~~~l~s~~~d-----g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 289 (621)
....+. .+.....|+.|+|. ..+|+.|+.+ +.+.||...... ....
T Consensus 154 Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~k------------------ 215 (361)
T KOG2445|consen 154 LQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLK------------------ 215 (361)
T ss_pred hhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeee------------------
Confidence 222222 35566789999974 3567777765 478888875533 1111
Q ss_pred ccccccCCcccceeeeeecCCC----CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeecccee
Q psy15549 290 VPLFHDDTMKSFFRRLTFSPDG----QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVL 365 (621)
Q Consensus 290 ~~~~~~~~~~~~i~~~~~spdg----~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (621)
+-....+..+|+.++|.|+- ..||+++ .|| ++||++......-..
T Consensus 216 --va~L~d~~dpI~di~wAPn~Gr~y~~lAvA~-----kDg-v~I~~v~~~~s~i~~----------------------- 264 (361)
T KOG2445|consen 216 --VAELPDHTDPIRDISWAPNIGRSYHLLAVAT-----KDG-VRIFKVKVARSAIEE----------------------- 264 (361)
T ss_pred --ehhcCCCCCcceeeeeccccCCceeeEEEee-----cCc-EEEEEEeeccchhhh-----------------------
Confidence 11233566778999999863 3455555 555 666665521110000
Q ss_pred eecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 366 FELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
.-+.+...-+.+. -+.+..+ ..|.+.|..+.|+-.|..|++.|.||.||+|...
T Consensus 265 ----------------ee~~~~~~~~~l~------v~~vs~~-~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 265 ----------------EEVLAPDLMTDLP------VEKVSEL-DDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred ----------------hcccCCCCccccc------eEEeeec-cCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 0000000000000 0122223 4699999999999999999999999999999866
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.5e-25 Score=214.27 Aligned_cols=231 Identities=27% Similarity=0.478 Sum_probs=203.8
Q ss_pred cCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEc
Q psy15549 11 HNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 90 (621)
Q Consensus 11 ~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 90 (621)
.|...|.|+..-..++ .+++|+.|..+- +|......... .+.+|..+|.++.|+
T Consensus 26 ~hsaav~~lk~~~s~r-----~~~~Gg~~~k~~--------------L~~i~kp~~i~-------S~~~hespIeSl~f~ 79 (825)
T KOG0267|consen 26 AHSAAVGCLKIRKSSR-----SLVTGGEDEKVN--------------LWAIGKPNAIT-------SLTGHESPIESLTFD 79 (825)
T ss_pred hhhhhhceeeeeccce-----eeccCCCceeec--------------cccccCCchhh-------eeeccCCcceeeecC
Confidence 3566788888766666 999999999998 88766443322 389999999999999
Q ss_pred cCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 91 PNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 91 pdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
++..+|++|+ ++.|++||+... ..++.|.+|...+..+.|+|-+.|+|+|+.|+.+++||.+...+.
T Consensus 80 ~~E~LlaagsasgtiK~wDleeA-------k~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~----- 147 (825)
T KOG0267|consen 80 TSERLLAAGSASGTIKVWDLEEA-------KIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCS----- 147 (825)
T ss_pred cchhhhcccccCCceeeeehhhh-------hhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCce-----
Confidence 9999999998 889999999977 778899999999999999999999999999999999999987765
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEE
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYV 249 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 249 (621)
..+.+|...|.++.|+|+|++++.|+.|..++|||+..|+.+..|..|.+.+..+.|+|..-.+
T Consensus 148 ----------------~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Ll 211 (825)
T KOG0267|consen 148 ----------------HTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLL 211 (825)
T ss_pred ----------------eeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhh
Confidence 5667899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 250 ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 250 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
++|+.|+++++||+++.+.+...... ...|.+.+|+|++..++++.
T Consensus 212 a~Gs~d~tv~f~dletfe~I~s~~~~-----------------------~~~v~~~~fn~~~~~~~~G~ 257 (825)
T KOG0267|consen 212 APGSSDRTVRFWDLETFEVISSGKPE-----------------------TDGVRSLAFNPDGKIVLSGE 257 (825)
T ss_pred ccCCCCceeeeeccceeEEeeccCCc-----------------------cCCceeeeecCCceeeecCc
Confidence 99999999999999988877665422 34568999999999988865
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.6e-25 Score=213.69 Aligned_cols=235 Identities=20% Similarity=0.398 Sum_probs=199.8
Q ss_pred cccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIV 155 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~v 155 (621)
+..|...|.++..-..++.+++|+ +..+-+|.+... ..+..+.+|..+|.++.|+++..+|+.|+.+|+|++
T Consensus 24 ~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp-------~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~ 96 (825)
T KOG0267|consen 24 FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKP-------NAITSLTGHESPIESLTFDTSERLLAAGSASGTIKV 96 (825)
T ss_pred hhhhhhhhceeeeeccceeeccCCCceeeccccccCC-------chhheeeccCCcceeeecCcchhhhcccccCCceee
Confidence 567999999999877889999998 666779998765 445568999999999999999999999999999999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCc
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKK 235 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 235 (621)
||+...+.+ +.+.+|...+..+.|+|-+.+++.|+.|+.+.+||++...+.+.+.+|..
T Consensus 97 wDleeAk~v---------------------rtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~ 155 (825)
T KOG0267|consen 97 WDLEEAKIV---------------------RTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTR 155 (825)
T ss_pred eehhhhhhh---------------------hhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcc
Confidence 999988765 66789999999999999999999999999999999998889999999999
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
.+..+.|+|+|++++.++.|.+++|||+..|+.+..+..+ .+.+..+.|+|..-+++
T Consensus 156 vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~-----------------------e~~v~sle~hp~e~Lla 212 (825)
T KOG0267|consen 156 VVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSH-----------------------EGKVQSLEFHPLEVLLA 212 (825)
T ss_pred eeEEEeecCCCceeeccCCcceeeeecccccccccccccc-----------------------cccccccccCchhhhhc
Confidence 9999999999999999999999999999999988777533 34456677777665555
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
.++ .|+++++
T Consensus 213 ~Gs----------------------------------------------------------------------~d~tv~f 222 (825)
T KOG0267|consen 213 PGS----------------------------------------------------------------------SDRTVRF 222 (825)
T ss_pred cCC----------------------------------------------------------------------CCceeee
Confidence 544 6777888
Q ss_pred EeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCC
Q psy15549 396 YDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTD 433 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~d 433 (621)
||+++.+.+.... .....|.+.+|+|+|+.+++|...
T Consensus 223 ~dletfe~I~s~~-~~~~~v~~~~fn~~~~~~~~G~q~ 259 (825)
T KOG0267|consen 223 WDLETFEVISSGK-PETDGVRSLAFNPDGKIVLSGEQI 259 (825)
T ss_pred eccceeEEeeccC-CccCCceeeeecCCceeeecCchh
Confidence 8887777666653 346789999999999888877544
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-23 Score=182.61 Aligned_cols=291 Identities=16% Similarity=0.190 Sum_probs=208.3
Q ss_pred EEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 84 VNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 84 V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
-.|+.|++.|.+||+|. +|.|.|||+.+. ...+.+.+|..+|++++||++|++|++++.|..|.+||+..+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~-------~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs 98 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTF-------RIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGS 98 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEcccc-------chhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCC
Confidence 78999999999999998 889999999976 6677889999999999999999999999999999999999998
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEeccC----Ccce
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKGKNLGILTEH----KKFV 237 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----~~~v 237 (621)
++..+ ...++|+.+.|+|.. +..++.-.+..-.+.++..+.....-... ....
T Consensus 99 ~l~ri----------------------rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sa 156 (405)
T KOG1273|consen 99 PLKRI----------------------RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSA 156 (405)
T ss_pred ceeEE----------------------EccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCcccccccc
Confidence 76433 456789999999943 33333334444555555543221111111 1112
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
.+..|.+.|+++++|...|.+.+||..+.+++..+.... ...|..+.++..|++|+..
T Consensus 157 s~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits----------------------~~~IK~I~~s~~g~~liiN 214 (405)
T KOG1273|consen 157 SHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITS----------------------VQAIKQIIVSRKGRFLIIN 214 (405)
T ss_pred ccccccCCCCEEEEecCcceEEEEecchheeeeeeeech----------------------heeeeEEEEeccCcEEEEe
Confidence 344689999999999999999999999988877664211 1235666777777766665
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEe
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYD 397 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 397 (621)
+ .|..|+.|+
T Consensus 215 t----------------------------------------------------------------------sDRvIR~ye 224 (405)
T KOG1273|consen 215 T----------------------------------------------------------------------SDRVIRTYE 224 (405)
T ss_pred c----------------------------------------------------------------------CCceEEEEe
Confidence 5 455555555
Q ss_pred CCCC-------c--eeEEEec-ccccceEEEEEcCCCCeEEEEe-CCCcEEEEEecCCcCCcccCCCCCc-ccccCCCCC
Q psy15549 398 TQHA-------S--PFAFIAN-IHYTKLTDITWSSDGKVLIASS-TDGYCSIISFGDNEIGIPYVPPSGE-ESKENDPTK 465 (621)
Q Consensus 398 ~~~~-------~--~~~~~~~-~h~~~v~~~~~spdg~~l~s~s-~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~ 465 (621)
+..- + +.+.+.. .....-.+++||.||.|++.++ .-..++||.-..|.+++.+.+..++ ...+.++|-
T Consensus 225 ~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~ 304 (405)
T KOG1273|consen 225 ISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPV 304 (405)
T ss_pred hhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccc
Confidence 4320 1 1111100 1223456789999999998776 4567999999999999999998855 446788888
Q ss_pred CCCcccCCCcccHHHhcccCccccccccCCCCCCCc
Q psy15549 466 GEPVRSEDKPRSAEQAKGEGKVLGEKQTGNKVSPTD 501 (621)
Q Consensus 466 ~~~~~s~~~~~~~~~w~~~~~~~~~~~~~~~~s~~~ 501 (621)
...+++. ..|.+++|......- -..|.|+-
T Consensus 305 rp~i~si-~sg~v~iw~~~~~en-----wsafAPdF 334 (405)
T KOG1273|consen 305 RPIIASI-ASGVVYIWAVVQVEN-----WSAFAPDF 334 (405)
T ss_pred eeeeeec-cCCceEEEEeecccc-----hhhcCchH
Confidence 7777777 778899998554432 23455554
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-23 Score=192.47 Aligned_cols=285 Identities=12% Similarity=0.162 Sum_probs=227.9
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCC-EEEEEeCCCcEEEEEc
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE-LLASGDDESTIIVWKQ 158 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~-~l~s~s~dg~i~vwd~ 158 (621)
.+.|++|.|+|...+|++++ |+.++||.+..... ..++.+.--..+|.+.+|.|+|. .+++++....++.||+
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N-----~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDl 287 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVN-----PKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDL 287 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccC-----hhheeeeeccCccceeeecCCCceEEEecccceEEEEeec
Confidence 46899999999999999988 99999999987643 34555555677999999999999 8899999999999999
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCC-CCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcce
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHL-EDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFV 237 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v 237 (621)
.+.+..+. ..+.++. ..+.....+|++++|+..+..|.|.+....+++.+..++ -.+.|
T Consensus 288 e~ak~~k~-------------------~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v 347 (514)
T KOG2055|consen 288 ETAKVTKL-------------------KPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVV 347 (514)
T ss_pred cccccccc-------------------cCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEE
Confidence 88865321 2233333 457788999999999999999999999999999998886 56789
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
..++|+.+++.|++++.+|.|.+||++...++..+..... -.-++++.|++|.|||+|
T Consensus 348 ~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~----------------------v~gts~~~S~ng~ylA~G 405 (514)
T KOG2055|consen 348 SDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGS----------------------VHGTSLCISLNGSYLATG 405 (514)
T ss_pred eeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCc----------------------cceeeeeecCCCceEEec
Confidence 9999999999999999999999999999888776642110 012566777777777776
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEe
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYD 397 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 397 (621)
+ ..|.|.|||
T Consensus 406 S----------------------------------------------------------------------~~GiVNIYd 415 (514)
T KOG2055|consen 406 S----------------------------------------------------------------------DSGIVNIYD 415 (514)
T ss_pred c----------------------------------------------------------------------CcceEEEec
Confidence 6 456666666
Q ss_pred CCC------CceeEEEecccccceEEEEEcCCCCeEEEEe--CCCcEEEEEecCCcCCcccCC---CCCcccccCCCCCC
Q psy15549 398 TQH------ASPFAFIANIHYTKLTDITWSSDGKVLIASS--TDGYCSIISFGDNEIGIPYVP---PSGEESKENDPTKG 466 (621)
Q Consensus 398 ~~~------~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s--~dg~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 466 (621)
..+ .+++..+.. -...|++|.|+||++.||.+| .+..+++-++.+-.....++. +-+.++++.|+|.+
T Consensus 416 ~~s~~~s~~PkPik~~dN-Ltt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~s 494 (514)
T KOG2055|consen 416 GNSCFASTNPKPIKTVDN-LTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNS 494 (514)
T ss_pred cchhhccCCCCchhhhhh-hheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCC
Confidence 433 345555533 456899999999999999887 578899999998776666655 45568899999999
Q ss_pred CCcccCCCcccHHHhcc
Q psy15549 467 EPVRSEDKPRSAEQAKG 483 (621)
Q Consensus 467 ~~~~s~~~~~~~~~w~~ 483 (621)
..++-+...|.+.+|++
T Consensus 495 G~lAvGNe~grv~l~kL 511 (514)
T KOG2055|consen 495 GYLAVGNEAGRVHLFKL 511 (514)
T ss_pred ceEEeecCCCceeeEee
Confidence 99999999999999976
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.9e-23 Score=188.89 Aligned_cols=215 Identities=18% Similarity=0.253 Sum_probs=166.3
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
-+.+..-+.++|++++|+|... ..++|+|..-|.|- +||+.+.+.... -...+..|..+|
T Consensus 178 ~~~v~kv~~~Rit~l~fHPt~~---~~lva~GdK~G~VG--------------~Wn~~~~~~d~d---~v~~f~~hs~~V 237 (498)
T KOG4328|consen 178 ILNVAKVTDRRITSLAFHPTEN---RKLVAVGDKGGQVG--------------LWNFGTQEKDKD---GVYLFTPHSGPV 237 (498)
T ss_pred ecceeEecccceEEEEecccCc---ceEEEEccCCCcEE--------------EEecCCCCCccC---ceEEeccCCccc
Confidence 3455666888999999999864 35899999999999 888853332221 234578899999
Q ss_pred EEEEEccCC--CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 85 NVVRFSPNG--ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 85 ~~l~~spdg--~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
.++.|+|.. +++.+..||.+++-|+.... +..+..+..-...+..+.|+.+...++.+..=|...+||++++.
T Consensus 238 s~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i-----~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~ 312 (498)
T KOG4328|consen 238 SGLKFSPANTSQIYSSSYDGTIRLQDFEGNI-----SEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDG 312 (498)
T ss_pred cceEecCCChhheeeeccCceeeeeeecchh-----hHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCC
Confidence 999999943 45555559999999998762 23333343345567788898888888888877899999999887
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcE----EEEeccCCcce
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHKGKN----LGILTEHKKFV 237 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~~v 237 (621)
.-. ..+.-|...|+.++++|- ..+|||++.|++++|||++.-.. +.....|...|
T Consensus 313 s~~--------------------~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV 372 (498)
T KOG4328|consen 313 SEY--------------------ENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSV 372 (498)
T ss_pred ccc--------------------hhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceeccccccee
Confidence 521 234568889999999995 46799999999999999986322 23334799999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQ 264 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~ 264 (621)
.+..|||.+-.|++.+.|..|+|||..
T Consensus 373 ~sAyFSPs~gtl~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 373 NSAYFSPSGGTLLTTCQDNEIRVFDSS 399 (498)
T ss_pred eeeEEcCCCCceEeeccCCceEEeecc
Confidence 999999998889999999999999974
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.3e-23 Score=181.30 Aligned_cols=313 Identities=15% Similarity=0.242 Sum_probs=213.7
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccc-ccccCcEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDL-SRHQKAVN 85 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~ 85 (621)
.+.-.|..+|..++|++-...+....+|+.+.+ .+. |+.......... +.... ..|...-+
T Consensus 32 ~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~-rvt--------------iy~c~~d~~ir~---lq~y~D~d~~Esfy 93 (385)
T KOG1034|consen 32 HLKEDHNKPIFGVAFNSFLGCDEPQVFATVGGN-RVT--------------IYECPGDGGIRL---LQSYADEDHDESFY 93 (385)
T ss_pred ehhccCCCccceeeeehhcCCCCCceEEEeCCc-EEE--------------EEEECCccceee---eeeccCCCCCcceE
Confidence 345567789999999964433444577777765 455 555443321111 01111 23667788
Q ss_pred EEEEccC----CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcc
Q psy15549 86 VVRFSPN----GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWKQK 159 (621)
Q Consensus 86 ~l~~spd----g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd~~ 159 (621)
.++|+-| ..+||+|+ -|-|+|.|+..+ .....+.+|...|+.+.|.|+ .+++++++.|.+|++|+++
T Consensus 94 tcsw~yd~~~~~p~la~~G~~GvIrVid~~~~-------~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~ 166 (385)
T KOG1034|consen 94 TCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSG-------QCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ 166 (385)
T ss_pred EEEEEecCCCCCeeEEeecceeEEEEEecchh-------hhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence 8888764 34777777 777899999987 778889999999999999995 4799999999999999999
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE-----------
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLG----------- 228 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~----------- 228 (621)
+..++..| .-+.+|...|.++.|+++|.+|++++.|.+|++|++...+...
T Consensus 167 ~~~Cv~Vf------------------GG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~ 228 (385)
T KOG1034|consen 167 TDVCVAVF------------------GGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPN 228 (385)
T ss_pred CCeEEEEe------------------cccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCC
Confidence 99987544 4567899999999999999999999999999999997321100
Q ss_pred -----------------EeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccC-ceeeeecccCCCCCCCccccccccc
Q psy15549 229 -----------------ILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQS-KKVISRACRSKLPVDSSHELFDKVV 290 (621)
Q Consensus 229 -----------------~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (621)
+..-|...|-|+.|- |+++++-+-++.|..|.... ++.+.....
T Consensus 229 ~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp---------------- 290 (385)
T KOG1034|consen 229 KTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKP---------------- 290 (385)
T ss_pred CccCcCCccccccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCC----------------
Confidence 112366667777777 78999999999999998732 221111110
Q ss_pred cccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCC
Q psy15549 291 PLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKP 370 (621)
Q Consensus 291 ~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (621)
|++..-+.+. + .-....+|-+... |.
T Consensus 291 ------------------~es~~Ti~~~--~--~~~~c~iWfirf~------------------------~d-------- 316 (385)
T KOG1034|consen 291 ------------------PESATTILGE--F--DYPMCDIWFIRFA------------------------FD-------- 316 (385)
T ss_pred ------------------CccceeeeeE--e--ccCccceEEEEEe------------------------ec--------
Confidence 0110001100 0 1112223333211 11
Q ss_pred CCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEE--Ee-cccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 371 SDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAF--IA-NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 371 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~-~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
+-.++|+++...|.|++||++...+... +. ......|...+||.||..|+..++|++|.-||.-
T Consensus 317 --------~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 317 --------PWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred --------HHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 1235677777899999999988765321 11 1234579999999999999999999999999864
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-23 Score=190.28 Aligned_cols=213 Identities=17% Similarity=0.265 Sum_probs=182.1
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
.++|.|++-+|.|. +|+.|+..|.+. +|.+.++..... +.+|=..|+|+.|+-|
T Consensus 81 Pg~v~al~s~n~G~-----~l~ag~i~g~lY--------------lWelssG~LL~v-------~~aHYQ~ITcL~fs~d 134 (476)
T KOG0646|consen 81 PGPVHALASSNLGY-----FLLAGTISGNLY--------------LWELSSGILLNV-------LSAHYQSITCLKFSDD 134 (476)
T ss_pred ccceeeeecCCCce-----EEEeecccCcEE--------------EEEeccccHHHH-------HHhhccceeEEEEeCC
Confidence 56899999999996 888888999999 999999876544 8999999999999999
Q ss_pred CCEEEEEc-CCceEEEEeccCccc--cccceecccccccCCCeEEEEECCC--CCEEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 93 GELLASGD-DVGKEIWYLTERESG--IANVEFASDLSRHQKAVNVVRFSPN--GELLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 93 g~~las~~-d~~v~iw~~~~~~~~--~~~~~~~~~~~~h~~~V~~i~~sp~--g~~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
|.+|++|+ |+.|.+|.+..--.. .....+.+.+..|+-+|+.+...+. ..+|+++|.|.++++||+..+..+..+
T Consensus 135 gs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti 214 (476)
T KOG0646|consen 135 GSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTI 214 (476)
T ss_pred CcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEE
Confidence 99999999 889999998653221 1144678889999999999998764 358999999999999999999765333
Q ss_pred CCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC----------------cEEEEec
Q psy15549 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG----------------KNLGILT 231 (621)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~----------------~~~~~~~ 231 (621)
.....+.+++..|.+..+++|+.+|.|.+.++... ..+..+.
T Consensus 215 ----------------------~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~ 272 (476)
T KOG0646|consen 215 ----------------------TFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLV 272 (476)
T ss_pred ----------------------ecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeec
Confidence 45677999999999999999999999999887532 3455667
Q ss_pred cCCc--ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 232 EHKK--FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 232 ~~~~--~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
+|.+ .|+|++++-||..|++|+.||.|+|||+.+.++++++.
T Consensus 273 Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~ 316 (476)
T KOG0646|consen 273 GHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQ 316 (476)
T ss_pred cccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHh
Confidence 8888 99999999999999999999999999999999888774
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=183.43 Aligned_cols=224 Identities=20% Similarity=0.296 Sum_probs=171.5
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccc--cccccceeeccccccccCcEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTER--ESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~--~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
...|.+.|..+..++-++ ..+.|+-+..|.|.||++...- .-+.+. ........++.++.+|.+.=+.
T Consensus 147 ~i~h~g~~NRvr~~~~~~---~~~~aswse~G~V~Vw~l~~~l-------~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~ 216 (440)
T KOG0302|consen 147 SIPHYGGINRVRVSRLGN---EVLCASWSENGRVQVWDLAPHL-------NALSEPGLEVKDSEFRPLFTFNGHKGEGYG 216 (440)
T ss_pred ccccccccceeeecccCC---cceeeeecccCcEEEEEchhhh-------hhhcCccccccccccCceEEecccCcccee
Confidence 345677788887777653 2477788999999955543220 001111 1111234456778999999999
Q ss_pred EEEccCC-CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEEccCCCC
Q psy15549 87 VRFSPNG-ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 87 l~~spdg-~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
++|||-- ..|++|. ...|++|....+.... -...+.+|+..|-.++|||. ...|++|+.||+|+|||++.+..
T Consensus 217 LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~v----d~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~ 292 (440)
T KOG0302|consen 217 LDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKV----DQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPK 292 (440)
T ss_pred eecccccccccccCccccceEeeeeccCceee----cCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCc
Confidence 9999922 2456665 8889999998875532 23346679999999999994 45899999999999999999854
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC---CcEEEEeccCCcceEEE
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK---GKNLGILTEHKKFVQGV 240 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~---~~~~~~~~~~~~~v~~l 240 (621)
... .....|.+.|+.|.|+.+..+||+|+.||+++|||+++ ++++..++-|..+|+++
T Consensus 293 ~~~-------------------~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsi 353 (440)
T KOG0302|consen 293 KAA-------------------VSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSI 353 (440)
T ss_pred cce-------------------eEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEE
Confidence 432 23378999999999999888999999999999999986 56788999999999999
Q ss_pred EEcCCC-CEEEEEeCCCcEEEEEccC
Q psy15549 241 AWDPKN-QYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 241 ~~sp~~-~~l~s~~~dg~i~iwd~~~ 265 (621)
.|+|.. ..|++++.|..|.|||+..
T Consensus 354 eW~p~e~s~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 354 EWHPHEDSVIAASGEDNQITIWDLSV 379 (440)
T ss_pred EeccccCceEEeccCCCcEEEEEeec
Confidence 999954 6688889999999999864
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.3e-22 Score=195.19 Aligned_cols=287 Identities=12% Similarity=0.186 Sum_probs=214.5
Q ss_pred CcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccc---cCCCeEEEEECC-CCCEEEEEeCCCcEEEEE
Q psy15549 82 KAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSR---HQKAVNVVRFSP-NGELLASGDDESTIIVWK 157 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~---h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd 157 (621)
....+|...++-..|+.++.....||.+....... .....+.. -.-.+..+.|.. +.++||+++..|.|.+||
T Consensus 40 ~~~nAIs~nr~~~qiv~AGrs~lklyai~~~~~~~---~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWd 116 (839)
T KOG0269|consen 40 AKANAISVNRDINQIVVAGRSLLKLYAINPNDFSE---KCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWD 116 (839)
T ss_pred cccceEeecCCcceeEEecccceeeEeeCcccCCc---ceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEe
Confidence 45677778899999999998888999887653321 11111111 112355678876 567999999999999999
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcc
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF 236 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 236 (621)
+....... ....+..|...+++++|++ ...+|++|+.||.|++||++..+...++.+....
T Consensus 117 lnk~~rnk------------------~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSES 178 (839)
T KOG0269|consen 117 LNKSIRNK------------------LLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSES 178 (839)
T ss_pred cCccccch------------------hhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchh
Confidence 98721111 1246688999999999998 4578999999999999999999999999999999
Q ss_pred eEEEEEcC-CCCEEEEEeCCCcEEEEEccCce-eeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeE
Q psy15549 237 VQGVAWDP-KNQYVATLSSDRSLRTYSIQSKK-VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL 314 (621)
Q Consensus 237 v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l 314 (621)
|+.+.|+| .+.+|+++...|.+++||++.-. .... ...|.+++.++.|+|++.+|
T Consensus 179 iRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k-----------------------~~AH~GpV~c~nwhPnr~~l 235 (839)
T KOG0269|consen 179 IRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKK-----------------------LTAHNGPVLCLNWHPNREWL 235 (839)
T ss_pred hhceeeccCCCceEEEecCCceEEEeeccCchhHHHH-----------------------hhcccCceEEEeecCCCcee
Confidence 99999999 46789999999999999998643 2222 34567778999999998888
Q ss_pred EeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEE
Q psy15549 315 IAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNIL 394 (621)
Q Consensus 315 ~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 394 (621)
|+|+ .|+.|+
T Consensus 236 ATGG----------------------------------------------------------------------RDK~vk 245 (839)
T KOG0269|consen 236 ATGG----------------------------------------------------------------------RDKMVK 245 (839)
T ss_pred eecC----------------------------------------------------------------------CCccEE
Confidence 8876 456667
Q ss_pred EEeCCCCc--eeEEEecccccceEEEEEcCCCC-eEEEEe--CCCcEEEEEecCCc-CCcccCCCCCcccccCCCC-CCC
Q psy15549 395 LYDTQHAS--PFAFIANIHYTKLTDITWSSDGK-VLIASS--TDGYCSIISFGDNE-IGIPYVPPSGEESKENDPT-KGE 467 (621)
Q Consensus 395 iwd~~~~~--~~~~~~~~h~~~v~~~~~spdg~-~l~s~s--~dg~i~iw~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~ 467 (621)
|||..+++ ++.++. -..+|.++.|-|+.+ .||+++ .|-.|+|||+...- ....+..|...++.+.|.. +-.
T Consensus 246 iWd~t~~~~~~~~tIn--Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~ 323 (839)
T KOG0269|consen 246 IWDMTDSRAKPKHTIN--TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRI 323 (839)
T ss_pred EEeccCCCccceeEEe--ecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCce
Confidence 77766544 333442 346899999999876 566665 68899999998654 3445667887888777755 445
Q ss_pred CcccCCCcccHHHhccc
Q psy15549 468 PVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 468 ~~~s~~~~~~~~~w~~~ 484 (621)
.+-+.+.|+.+.+-...
T Consensus 324 ~l~s~sKD~tv~qh~~k 340 (839)
T KOG0269|consen 324 NLWSCSKDGTVLQHLFK 340 (839)
T ss_pred eeEeecCccHHHHhhhh
Confidence 67788899888775433
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-22 Score=190.73 Aligned_cols=316 Identities=18% Similarity=0.306 Sum_probs=232.2
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
+..+|++.|.||...|.|. .||+|+.||+|+ ||.+.++.+... + ...+.|.||
T Consensus 395 vyrGHtg~Vr~iSvdp~G~-----wlasGsdDGtvr--------------iWEi~TgRcvr~-------~-~~d~~I~~v 447 (733)
T KOG0650|consen 395 VYRGHTGLVRSISVDPSGE-----WLASGSDDGTVR--------------IWEIATGRCVRT-------V-QFDSEIRSV 447 (733)
T ss_pred eEeccCCeEEEEEecCCcc-----eeeecCCCCcEE--------------EEEeecceEEEE-------E-eecceeEEE
Confidence 5678999999999999998 999999999999 888877776543 1 124589999
Q ss_pred EEccCCC--EEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEE----eCCCcEEEEEccCC
Q psy15549 88 RFSPNGE--LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG----DDESTIIVWKQKTD 161 (621)
Q Consensus 88 ~~spdg~--~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~----s~dg~i~vwd~~~~ 161 (621)
+|+|.+. .||++-...+.|.+..-+.. +.. -+....|+++ ..++.+..|.-...
T Consensus 448 aw~P~~~~~vLAvA~~~~~~ivnp~~G~~-------~e~-------------~~t~ell~~~~~~~~p~~~~~~W~~~~~ 507 (733)
T KOG0650|consen 448 AWNPLSDLCVLAVAVGECVLIVNPIFGDR-------LEV-------------GPTKELLASAPNESEPDAAVVTWSRASL 507 (733)
T ss_pred EecCCCCceeEEEEecCceEEeCccccch-------hhh-------------cchhhhhhcCCCccCCcccceeechhhh
Confidence 9999765 56666555555555443310 000 0011122222 23557778865533
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEeccCCcceE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD---NTAIMWDVHKGKNLGILTEHKKFVQ 238 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~v~ 238 (621)
.....- +.....|...|..+.|+..|.+|++...+ ..|.|+++.......-|+...+.|.
T Consensus 508 ~e~~~~-----------------v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq 570 (733)
T KOG0650|consen 508 DELEKG-----------------VCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQ 570 (733)
T ss_pred hhhccc-----------------eEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCcee
Confidence 322100 13455788999999999999999997664 5789999987776666766778899
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
++.|+|...+|++++. ..|+|||+..+.+++.+.. ...+|.+++.+|.|..|++++
T Consensus 571 ~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~t-----------------------g~kwiS~msihp~GDnli~gs 626 (733)
T KOG0650|consen 571 RVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLT-----------------------GSKWISSMSIHPNGDNLILGS 626 (733)
T ss_pred EEEecCCCceEEEEec-cceEEEehhHHHHHHHHhc-----------------------CCeeeeeeeecCCCCeEEEec
Confidence 9999999999988764 5799999988777665532 234578999999999999999
Q ss_pred ccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeC
Q psy15549 319 GCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDT 398 (621)
Q Consensus 319 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 398 (621)
.|+.+..+++.. ...+...+..|...+..++|++ ....+++++.||++.||.-
T Consensus 627 -----~d~k~~WfDldl------sskPyk~lr~H~~avr~Va~H~----------------ryPLfas~sdDgtv~Vfhg 679 (733)
T KOG0650|consen 627 -----YDKKMCWFDLDL------SSKPYKTLRLHEKAVRSVAFHK----------------RYPLFASGSDDGTVIVFHG 679 (733)
T ss_pred -----CCCeeEEEEccc------CcchhHHhhhhhhhhhhhhhcc----------------ccceeeeecCCCcEEEEee
Confidence 899888887653 2456677888888999999987 4577888889999998852
Q ss_pred C------CC---ceeEEEecccccc----eEEEEEcCCCCeEEEEeCCCcEEEE
Q psy15549 399 Q------HA---SPFAFIANIHYTK----LTDITWSSDGKVLIASSTDGYCSII 439 (621)
Q Consensus 399 ~------~~---~~~~~~~~~h~~~----v~~~~~spdg~~l~s~s~dg~i~iw 439 (621)
. .. -++..+ .+|... |.++.|+|...+|++++.||+|++|
T Consensus 680 ~VY~Dl~qnpliVPlK~L-~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 680 MVYNDLLQNPLIVPLKRL-RGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred eeehhhhcCCceEeeeec-cCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 2 11 133344 467655 8999999999999999999999998
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.2e-22 Score=172.67 Aligned_cols=223 Identities=22% Similarity=0.393 Sum_probs=167.6
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCcccc-ccceeEEeccccccccceeeccccccccCcE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRL-KTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
..+...|.+.|.++.+.+..- .++++|+.||.|.+||++..... .+.-|-+-. + .--...-.+|.-.|
T Consensus 36 ~d~~r~HgGsvNsL~id~teg----rymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~---c----~v~~~h~~~Hky~i 104 (397)
T KOG4283|consen 36 KDFVRPHGGSVNSLQIDLTEG----RYMLSGGADGSIAVFDLQNATDYEASGLIAKHK---C----IVAKQHENGHKYAI 104 (397)
T ss_pred cceeccCCCccceeeeccccc----eEEeecCCCccEEEEEeccccchhhccceehee---e----eccccCCccceeee
Confidence 346778999999999998653 49999999999995555433211 000010000 0 00012246889999
Q ss_pred EEEEEcc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC---CCEEEEEeCCCcEEEEEcc
Q psy15549 85 NVVRFSP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN---GELLASGDDESTIIVWKQK 159 (621)
Q Consensus 85 ~~l~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~---g~~l~s~s~dg~i~vwd~~ 159 (621)
..+.|-| |.-++.+++ |..++|||..+. +....+ .-.+.|..-+++|- ..++|+|..|-.|++-|+.
T Consensus 105 ss~~WyP~DtGmFtssSFDhtlKVWDtnTl-------Q~a~~F-~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~ 176 (397)
T KOG4283|consen 105 SSAIWYPIDTGMFTSSSFDHTLKVWDTNTL-------QEAVDF-KMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIA 176 (397)
T ss_pred eeeEEeeecCceeecccccceEEEeecccc-------eeeEEe-ecCceeehhhcChhhhcceEEEEecCCCcEEEEecc
Confidence 9999999 555667777 999999999875 323223 24567888888883 4488889999999999999
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCC-cEEEE--------
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST-HLISGSVDNTAIMWDVHKG-KNLGI-------- 229 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~-~l~s~~~dg~i~vwd~~~~-~~~~~-------- 229 (621)
++... ..+.+|...|.++.|+|... .|++|+.||.|++||++.. .+...
T Consensus 177 SGs~s---------------------H~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~ 235 (397)
T KOG4283|consen 177 SGSFS---------------------HTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKR 235 (397)
T ss_pred CCcce---------------------eeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCcc
Confidence 99864 77899999999999999776 4778999999999999754 22222
Q ss_pred ------eccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCcee
Q psy15549 230 ------LTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV 268 (621)
Q Consensus 230 ------~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 268 (621)
-..|.+.|..++|..++.++++++.|..+++|+..+|+.
T Consensus 236 ~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~n 280 (397)
T KOG4283|consen 236 PPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRN 280 (397)
T ss_pred CccccccccccceeeeeeecccchhhhhccCccceEEeecccCcc
Confidence 235778899999999999999999999999999988764
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.3e-22 Score=182.89 Aligned_cols=299 Identities=16% Similarity=0.211 Sum_probs=212.7
Q ss_pred cccccccCcEEEEEEccCC--CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCC
Q psy15549 75 SDLSRHQKAVNVVRFSPNG--ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDE 150 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg--~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~d 150 (621)
....-+.+.|++++|+|.. +++|+|+ .|.|-+|++...+.. ..-+..+..|.++|.++.|+| +-..+++.+.|
T Consensus 180 ~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d---~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyD 256 (498)
T KOG4328|consen 180 NVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKD---KDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYD 256 (498)
T ss_pred ceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCc---cCceEEeccCCccccceEecCCChhheeeeccC
Confidence 3466788999999999954 5777777 778999999633221 133556778999999999999 55689999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-EEE
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN-LGI 229 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~-~~~ 229 (621)
|+|++-|++....-.. ..+......+..+.|+.+...++.+..=|...+||++++.. ...
T Consensus 257 GtiR~~D~~~~i~e~v-------------------~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~ 317 (498)
T KOG4328|consen 257 GTIRLQDFEGNISEEV-------------------LSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYEN 317 (498)
T ss_pred ceeeeeeecchhhHHH-------------------hhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchh
Confidence 9999999987753211 12223445677888988888888888888999999998665 566
Q ss_pred eccCCcceEEEEEcCCC-CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeec
Q psy15549 230 LTEHKKFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 308 (621)
+..|...|.+++++|.. .+||+++.|++++|||++....... ++.....|...|.++.||
T Consensus 318 ~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s-------------------p~lst~~HrrsV~sAyFS 378 (498)
T KOG4328|consen 318 LRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS-------------------PFLSTLPHRRSVNSAYFS 378 (498)
T ss_pred hhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCC-------------------cceecccccceeeeeEEc
Confidence 67788899999999965 5688999999999999987543221 123344566677788888
Q ss_pred CCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE
Q psy15549 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA 388 (621)
Q Consensus 309 pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (621)
|.+-.|++.+ .
T Consensus 379 Ps~gtl~TT~-----~---------------------------------------------------------------- 389 (498)
T KOG4328|consen 379 PSGGTLLTTC-----Q---------------------------------------------------------------- 389 (498)
T ss_pred CCCCceEeec-----c----------------------------------------------------------------
Confidence 8766666655 4
Q ss_pred cCCcEEEEeC----CCCceeEEEecccc----cceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCC-ccc-
Q psy15549 389 TENNILLYDT----QHASPFAFIANIHY----TKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSG-EES- 458 (621)
Q Consensus 389 ~dg~i~iwd~----~~~~~~~~~~~~h~----~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~-~~~- 458 (621)
|..|+|||. ....+...+...+. -.....+|.|+..++++|-.-..|-|+|-..++++..+..+.. .+.
T Consensus 390 -D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~ 468 (498)
T KOG4328|consen 390 -DNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPS 468 (498)
T ss_pred -CCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCcccccccc
Confidence 445555554 22233333321111 1244568999999999999888999999998887777655443 333
Q ss_pred ccCCCCCCC-CcccCCCcccHHHhccc
Q psy15549 459 KENDPTKGE-PVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 459 ~~~~~~~~~-~~~s~~~~~~~~~w~~~ 484 (621)
...++|.+. .++.....|.+++|...
T Consensus 469 vn~~HP~~~~~~aG~~s~Gki~vft~k 495 (498)
T KOG4328|consen 469 VNEFHPMRDTLAAGGNSSGKIYVFTNK 495 (498)
T ss_pred ceeecccccceeccCCccceEEEEecC
Confidence 447888887 44444566777776543
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=181.58 Aligned_cols=281 Identities=14% Similarity=0.181 Sum_probs=207.2
Q ss_pred eEEeccccccccceeeccccccc--cCcEEEEEEccCCCEEEEEc---CCceEEEEeccCccccccceecccccccCCCe
Q psy15549 58 IWYLTERESGIANVEFASDLSRH--QKAVNVVRFSPNGELLASGD---DVGKEIWYLTERESGIANVEFASDLSRHQKAV 132 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h--~~~V~~l~~spdg~~las~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V 132 (621)
|||+........ +..| ...+.+++|+.... |++++ |..+++|.-..... .+..+..+.+. .-
T Consensus 16 l~D~s~~~~~~~-------~~~~t~~pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~~---~Vp~~~k~~gd--~~ 82 (673)
T KOG4378|consen 16 LSDFSDLETKSE-------YVHQTAEPGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKTP---EVPRVRKLTGD--NA 82 (673)
T ss_pred EeecccccCccc-------cccCCCCCcceeeeccccce-EEEeecCCceeEEEecccCCCC---ccceeeccccc--hH
Confidence 888876654332 2222 23499999998765 44433 56677887654422 22333333332 33
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC
Q psy15549 133 NVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV 212 (621)
Q Consensus 133 ~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~ 212 (621)
.|++......|+++|+..+.|+|||++..... +.+.+|...|+++.++-...+||+++.
T Consensus 83 ~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~h---------------------r~lkdh~stvt~v~YN~~DeyiAsvs~ 141 (673)
T KOG4378|consen 83 FCVACASQSLYEISGGQSGCVKIWDLRAKLIH---------------------RFLKDHQSTVTYVDYNNTDEYIASVSD 141 (673)
T ss_pred HHHhhhhcceeeeccCcCceeeehhhHHHHHh---------------------hhccCCcceeEEEEecCCcceeEEecc
Confidence 34444445589999999999999999955433 567899999999999999999999999
Q ss_pred CCeEEEEECCCCcEEEEeccC-CcceEEEEEcCCCCE-EEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccc
Q psy15549 213 DNTAIMWDVHKGKNLGILTEH-KKFVQGVAWDPKNQY-VATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVV 290 (621)
Q Consensus 213 dg~i~vwd~~~~~~~~~~~~~-~~~v~~l~~sp~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (621)
.|.|.|..+.++.....|... ...|+-+.|+|..++ |.+++.+|.|.+||+........+.
T Consensus 142 gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~----------------- 204 (673)
T KOG4378|consen 142 GGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHAS----------------- 204 (673)
T ss_pred CCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchh-----------------
Confidence 999999999999888777644 345668999998766 5578889999999998766544332
Q ss_pred cccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCC
Q psy15549 291 PLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKP 370 (621)
Q Consensus 291 ~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (621)
..|..+...++|+|....|
T Consensus 205 -----~~HsAP~~gicfspsne~l-------------------------------------------------------- 223 (673)
T KOG4378|consen 205 -----EAHSAPCRGICFSPSNEAL-------------------------------------------------------- 223 (673)
T ss_pred -----hhccCCcCcceecCCccce--------------------------------------------------------
Confidence 2345555778888876554
Q ss_pred CCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC-CcCCcc
Q psy15549 371 SDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD-NEIGIP 449 (621)
Q Consensus 371 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~-~~~~~~ 449 (621)
|++.+.|..|++||....+....+. ...+.+.++|+++|.+|+.|...|.|..||+.. ...+..
T Consensus 224 -------------~vsVG~Dkki~~yD~~s~~s~~~l~--y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v 288 (673)
T KOG4378|consen 224 -------------LVSVGYDKKINIYDIRSQASTDRLT--YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAV 288 (673)
T ss_pred -------------EEEecccceEEEeecccccccceee--ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceE
Confidence 3445678899999998877766663 455899999999999999999999999999985 457777
Q ss_pred cCCCCCcccccCCCCC
Q psy15549 450 YVPPSGEESKENDPTK 465 (621)
Q Consensus 450 ~~~~~~~~~~~~~~~~ 465 (621)
+..|...++.+.|-+.
T Consensus 289 ~sah~~sVt~vafq~s 304 (673)
T KOG4378|consen 289 RSAHDASVTRVAFQPS 304 (673)
T ss_pred eeecccceeEEEeeec
Confidence 7888888888877554
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=7e-20 Score=179.15 Aligned_cols=257 Identities=12% Similarity=0.117 Sum_probs=182.1
Q ss_pred CCeEEEeccccccCCcceEE-EEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRI-VTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l-~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
..+.+++|+|+++ .+ ++++.++.|+ +||..+++... .+..+. .+..++|+|+
T Consensus 31 ~~~~~l~~~~dg~-----~l~~~~~~~~~v~--------------~~d~~~~~~~~-------~~~~~~-~~~~~~~~~~ 83 (300)
T TIGR03866 31 QRPRGITLSKDGK-----LLYVCASDSDTIQ--------------VIDLATGEVIG-------TLPSGP-DPELFALHPN 83 (300)
T ss_pred CCCCceEECCCCC-----EEEEEECCCCeEE--------------EEECCCCcEEE-------eccCCC-CccEEEECCC
Confidence 3578899999997 65 6778899999 88877654322 133333 3567899999
Q ss_pred CCEEEEE-c-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC-cEEEEEccCCCCCCCCCC
Q psy15549 93 GELLASG-D-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES-TIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 93 g~~las~-~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg-~i~vwd~~~~~~~~~~~~ 169 (621)
++.++++ . ++.+.+|++... ..+..+. +...+.+++|+|+|+++++++.++ .+.+||..+....
T Consensus 84 g~~l~~~~~~~~~l~~~d~~~~-------~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~----- 150 (300)
T TIGR03866 84 GKILYIANEDDNLVTVIDIETR-------KVLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIV----- 150 (300)
T ss_pred CCEEEEEcCCCCeEEEEECCCC-------eEEeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEE-----
Confidence 9977654 3 678999999765 3333332 223467899999999999988765 4667788766532
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCcEEEEeccCC-------cceEEEE
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVHKGKNLGILTEHK-------KFVQGVA 241 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~-------~~v~~l~ 241 (621)
... .....+.+++|+|++++|+++ ..++.|.+||+.+++.+..+..+. .....++
T Consensus 151 ----------------~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 213 (300)
T TIGR03866 151 ----------------DNV-LVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIK 213 (300)
T ss_pred ----------------EEE-EcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceE
Confidence 111 122345789999999988655 458999999999988776654221 1234688
Q ss_pred EcCCCCEEEEE-eCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 242 WDPKNQYVATL-SSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 242 ~sp~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
|+|++++++++ +.++.+.+||+.+++.+..+.. ...+.+++|+|+|++|++++
T Consensus 214 ~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~------------------------~~~~~~~~~~~~g~~l~~~~-- 267 (300)
T TIGR03866 214 LTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLV------------------------GQRVWQLAFTPDEKYLLTTN-- 267 (300)
T ss_pred ECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEe------------------------CCCcceEEECCCCCEEEEEc--
Confidence 99999986554 4567899999988776654321 12356889999998887654
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
+.++.|.+||+.+
T Consensus 268 -------------------------------------------------------------------~~~~~i~v~d~~~ 280 (300)
T TIGR03866 268 -------------------------------------------------------------------GVSNDVSVIDVAA 280 (300)
T ss_pred -------------------------------------------------------------------CCCCeEEEEECCC
Confidence 2468899999999
Q ss_pred CceeEEEecccccceEEEEEcC
Q psy15549 401 ASPFAFIANIHYTKLTDITWSS 422 (621)
Q Consensus 401 ~~~~~~~~~~h~~~v~~~~~sp 422 (621)
++.+..+.. ....+.++++|
T Consensus 281 ~~~~~~~~~--~~~~~~~~~~~ 300 (300)
T TIGR03866 281 LKVIKSIKV--GRLPWGVVVRP 300 (300)
T ss_pred CcEEEEEEc--ccccceeEeCC
Confidence 998888853 35668888875
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-20 Score=175.51 Aligned_cols=228 Identities=22% Similarity=0.283 Sum_probs=169.4
Q ss_pred CeEEEeccccccCCcceEEEEe--cCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTG--GADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg--~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
.+.++.|+... .|+++ +.|..|+ +|.-..... .+.......+. .-.|++....
T Consensus 36 g~~s~~w~~~n------~lvvas~~gdk~~~--------------~~~K~g~~~---~Vp~~~k~~gd--~~~Cv~~~s~ 90 (673)
T KOG4378|consen 36 GDFSFNWQRRN------FLVVASMAGDKVMR--------------IKEKDGKTP---EVPRVRKLTGD--NAFCVACASQ 90 (673)
T ss_pred cceeeeccccc------eEEEeecCCceeEE--------------EecccCCCC---ccceeeccccc--hHHHHhhhhc
Confidence 58999998776 45554 5566777 776544311 12222233332 3344544455
Q ss_pred CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 93 GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 93 g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
..++++|+ .+.|+|||+... ...+.+.+|...|+++.++....|||+++..|.|.|..+.++.....|
T Consensus 91 S~y~~sgG~~~~Vkiwdl~~k-------l~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f---- 159 (673)
T KOG4378|consen 91 SLYEISGGQSGCVKIWDLRAK-------LIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTF---- 159 (673)
T ss_pred ceeeeccCcCceeeehhhHHH-------HHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccce----
Confidence 58888888 888999999965 567778999999999999999999999999999999999998765433
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEEEe-ccCCcceEEEEEcCCC-CE
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTH-LISGSVDNTAIMWDVHKGKNLGIL-TEHKKFVQGVAWDPKN-QY 248 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~-l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~v~~l~~sp~~-~~ 248 (621)
-.+....|+-+.|+|..++ |.+++.+|.|.+||+....++..+ ..|..+...++|+|.. .+
T Consensus 160 ----------------~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l 223 (673)
T KOG4378|consen 160 ----------------TIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEAL 223 (673)
T ss_pred ----------------ecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccce
Confidence 1122445679999997664 567888999999999877766554 6799999999999955 66
Q ss_pred EEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 249 VATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 249 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
|++.+.|..|.+||.+.......+. ...+...++|+++|.+|++++
T Consensus 224 ~vsVG~Dkki~~yD~~s~~s~~~l~------------------------y~~Plstvaf~~~G~~L~aG~ 269 (673)
T KOG4378|consen 224 LVSVGYDKKINIYDIRSQASTDRLT------------------------YSHPLSTVAFSECGTYLCAGN 269 (673)
T ss_pred EEEecccceEEEeecccccccceee------------------------ecCCcceeeecCCceEEEeec
Confidence 8899999999999998776555442 123457889999998888766
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.5e-21 Score=183.33 Aligned_cols=277 Identities=13% Similarity=0.228 Sum_probs=206.8
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
.|..++|-|||..|+.+.++.+.+||...+ ..+..+.+|.+.|.+++|+.||+.+|+|+.|..|.+|.-.-..
T Consensus 14 ci~d~afkPDGsqL~lAAg~rlliyD~ndG-------~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG 86 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAGSRLLVYDTSDG-------TLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG 86 (1081)
T ss_pred chheeEECCCCceEEEecCCEEEEEeCCCc-------ccccccccccceEEEEEEccCCceeccCCCceeEEEecccccc
Confidence 799999999999999999999999999988 7789999999999999999999999999999999999865443
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~ 242 (621)
. .-..|...|.|+.|+|-..+|++++.. ..-+|........+ . .....+.+++|
T Consensus 87 ~-----------------------LkYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~K-~-kss~R~~~CsW 140 (1081)
T KOG1538|consen 87 I-----------------------LKYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVSK-H-KSSSRIICCSW 140 (1081)
T ss_pred e-----------------------eeeccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHHh-h-hhheeEEEeee
Confidence 2 234799999999999998899998854 46688765443221 1 12456788999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC-----CeEEec
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG-----QLLIAP 317 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg-----~~l~~~ 317 (621)
..||++|+.|-.+|+|.|-+-..... -.+. .....+.+|.+++|+|.. ..+++.
T Consensus 141 tnDGqylalG~~nGTIsiRNk~gEek-~~I~--------------------Rpgg~Nspiwsi~~~p~sg~G~~di~aV~ 199 (1081)
T KOG1538|consen 141 TNDGQYLALGMFNGTISIRNKNGEEK-VKIE--------------------RPGGSNSPIWSICWNPSSGEGRNDILAVA 199 (1081)
T ss_pred cCCCcEEEEeccCceEEeecCCCCcc-eEEe--------------------CCCCCCCCceEEEecCCCCCCccceEEEE
Confidence 99999999999999999986533222 2221 122345678999999964 345554
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEe
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYD 397 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 397 (621)
. +..++..+.+...+... ...+.|.|... .+.++|.+++.|+.|+.+.+|-
T Consensus 200 D-----W~qTLSFy~LsG~~Igk---------------~r~L~FdP~Ci---------sYf~NGEy~LiGGsdk~L~~fT 250 (1081)
T KOG1538|consen 200 D-----WGQTLSFYQLSGKQIGK---------------DRALNFDPCCI---------SYFTNGEYILLGGSDKQLSLFT 250 (1081)
T ss_pred e-----ccceeEEEEecceeecc---------------cccCCCCchhh---------eeccCCcEEEEccCCCceEEEe
Confidence 4 55555555443222111 11223333222 1334789999999999999996
Q ss_pred CCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 398 TQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 398 ~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
.. |-.+.++.. ....|+.++..|++++++.|+.||+|..|++...
T Consensus 251 R~-GvrLGTvg~-~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~fS 295 (1081)
T KOG1538|consen 251 RD-GVRLGTVGE-QDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIFS 295 (1081)
T ss_pred ec-CeEEeeccc-cceeEEEEEEccCCceEEEEEccCeeehhhhHHh
Confidence 43 444555533 5679999999999999999999999999998644
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=7e-21 Score=183.37 Aligned_cols=296 Identities=18% Similarity=0.213 Sum_probs=201.7
Q ss_pred EEEEcc---CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 86 VVRFSP---NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 86 ~l~~sp---dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
+..|++ ...+||.+. +++|.+++.......... ..+.....|...|..+.|.|....|++++.|.++++||+.+.
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee-~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s 132 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEE-RQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTS 132 (720)
T ss_pred cccccCCCCccceEEEecCCCceeeecchhhhcchhh-hhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccc
Confidence 366765 345777777 889999998765321100 123456679999999999996678999999999999999998
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCc---------------
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKGK--------------- 225 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~~--------------- 225 (621)
+.... ..+.+|...|.+++|.|+. ..|++|+.||.|.|||++-..
T Consensus 133 ~l~G~-------------------~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~ 193 (720)
T KOG0321|consen 133 RLVGG-------------------RLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRH 193 (720)
T ss_pred eeecc-------------------eeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccc
Confidence 86531 3467999999999999954 688999999999999986321
Q ss_pred ------------EEEEeccCCcceEE---EEEcCCCCEEEEEeC-CCcEEEEEccCceeeeecccCCCCCCCcccccccc
Q psy15549 226 ------------NLGILTEHKKFVQG---VAWDPKNQYVATLSS-DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKV 289 (621)
Q Consensus 226 ------------~~~~~~~~~~~v~~---l~~sp~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (621)
.+.....+...|.+ +.+..|...||+++. |+.|++||++............ ...
T Consensus 194 n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~--~~~-------- 263 (720)
T KOG0321|consen 194 NTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRG--SDK-------- 263 (720)
T ss_pred cCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCc--ccC--------
Confidence 01111234445555 556678899999888 9999999999876543321100 000
Q ss_pred ccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecC
Q psy15549 290 VPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELK 369 (621)
Q Consensus 290 ~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (621)
.+ ....-...+.++...
T Consensus 264 ~~--t~skrs~G~~nL~lD------------------------------------------------------------- 280 (720)
T KOG0321|consen 264 YP--THSKRSVGQVNLILD------------------------------------------------------------- 280 (720)
T ss_pred cc--CcccceeeeEEEEec-------------------------------------------------------------
Confidence 00 000000011112221
Q ss_pred CCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc--eeEEEecccccc--eEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 370 PSDDKPLFKLPYRIVIAVATENNILLYDTQHAS--PFAFIANIHYTK--LTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 370 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~h~~~--v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
..|.++++.+.|+.|++|++.+-. ++..+ .++... -..-..+||+.+|++|+.|...++|.+.+-+
T Consensus 281 ---------ssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~-sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e 350 (720)
T KOG0321|consen 281 ---------SSGTYLFASCTDNSIYFYNMRSLSISPVAEF-SGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPE 350 (720)
T ss_pred ---------CCCCeEEEEecCCcEEEEeccccCcCchhhc-cCcccceeeeeeecCCCCceEeccCCCcceeeeeecCcc
Confidence 134667777789999999987643 23222 122111 1122468999999999999999999999765
Q ss_pred -CCcccCCCCCcccccCCCCCCC-CcccCCCcccHHHhccc
Q psy15549 446 -IGIPYVPPSGEESKENDPTKGE-PVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 446 -~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~w~~~ 484 (621)
....+.+|..+++.+.+.+... .+++.++|-.+++|++.
T Consensus 351 ~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~ 391 (720)
T KOG0321|consen 351 APPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLS 391 (720)
T ss_pred CChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEecc
Confidence 4456677888998888776543 67777999999999864
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.1e-20 Score=182.82 Aligned_cols=357 Identities=17% Similarity=0.170 Sum_probs=237.7
Q ss_pred EEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEE
Q psy15549 17 LSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL 96 (621)
Q Consensus 17 ~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~l 96 (621)
.++.+++.|+ +.+..- +..+. +|.+...... ......-..|...++|.++||+++++
T Consensus 164 ~~I~~~~~ge-----~~~i~~-~~~~~--------------~~~v~~~~~~---~~~~~~~~~Htf~~t~~~~spn~~~~ 220 (792)
T KOG1963|consen 164 KSIVDNNSGE-----FKGIVH-MCKIH--------------IYFVPKHTKH---TSSRDITVHHTFNITCVALSPNERYL 220 (792)
T ss_pred ccEEEcCCce-----EEEEEE-eeeEE--------------EEEeccccee---eccchhhhhhcccceeEEeccccceE
Confidence 4667777775 444443 33444 7777664311 11112234577779999999999999
Q ss_pred EEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccc
Q psy15549 97 ASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEE 175 (621)
Q Consensus 97 as~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~ 175 (621)
|+|. ||.|.+|.--..+.. -...+.+..|...|.+++|+++|.+|++|+..|.+.+|.+.+++.
T Consensus 221 Aa~d~dGrI~vw~d~~~~~~---~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~k------------ 285 (792)
T KOG1963|consen 221 AAGDSDGRILVWRDFGSSDD---SETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKK------------ 285 (792)
T ss_pred EEeccCCcEEEEeccccccc---cccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCCc------------
Confidence 9998 899999986552111 133556778999999999999999999999999999999999983
Q ss_pred cccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc-----------CCcceEEEEEcC
Q psy15549 176 NVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE-----------HKKFVQGVAWDP 244 (621)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-----------~~~~v~~l~~sp 244 (621)
+.+..-.+.|..+.++||+.+.+....|+.|.+....+.....++.+ ..+-.+.++++|
T Consensus 286 ----------qfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idp 355 (792)
T KOG1963|consen 286 ----------QFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDP 355 (792)
T ss_pred ----------ccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcC
Confidence 45667889999999999999999999999999998766544333322 234467889999
Q ss_pred CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccC-
Q psy15549 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLEN- 323 (621)
Q Consensus 245 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~- 323 (621)
..+.++..+..|.|.+||+-+...+..+.........+. ..+.-.++.++.+..|.++++.-...+.
T Consensus 356 r~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~------------~n~~v~itav~~~~~gs~maT~E~~~d~~ 423 (792)
T KOG1963|consen 356 RTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGD------------VNIQVGITAVARSRFGSWMATLEARIDKF 423 (792)
T ss_pred CCCceeecCCCceEEEEeccccceeeeEEEEeecccCCc------------ceeEEeeeeehhhccceEEEEeeeeehhh
Confidence 777788889999999999998877766543222111111 1344567888888899999887632111
Q ss_pred --CC--CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCC
Q psy15549 324 --SD--STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQ 399 (621)
Q Consensus 324 --~d--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 399 (621)
.| ..++.|........-. -.......|........+.+.. .....++++.||.++||-+.
T Consensus 424 ~~~~~e~~LKFW~~n~~~kt~~--L~T~I~~PH~~~~vat~~~~~~--------------rs~~~vta~~dg~~KiW~~~ 487 (792)
T KOG1963|consen 424 NFFDGEVSLKFWQYNPNSKTFI--LNTKINNPHGNAFVATIFLNPT--------------RSVRCVTASVDGDFKIWVFT 487 (792)
T ss_pred hccCceEEEEEEEEcCCcceeE--EEEEEecCCCceeEEEEEecCc--------------ccceeEEeccCCeEEEEEEe
Confidence 11 2234454321111000 0011122233333333322200 11278899999999999884
Q ss_pred CCc---------eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC-CcCCccc
Q psy15549 400 HAS---------PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD-NEIGIPY 450 (621)
Q Consensus 400 ~~~---------~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~-~~~~~~~ 450 (621)
+.+ ....+...|..++++++|+.||. +++++.|++|.+||..+ .++....
T Consensus 488 ~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGs-lla~s~~~~Itiwd~~~~~~l~~~~ 547 (792)
T KOG1963|consen 488 DDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGS-LLAVSFDDTITIWDYDTKNELLCTE 547 (792)
T ss_pred cccccCcCccceEEeeeeccccCcccchhhcCCCc-EEEEecCCEEEEecCCChhhhhccc
Confidence 332 22222234788999999999996 55566889999999998 4544443
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.2e-21 Score=168.74 Aligned_cols=312 Identities=16% Similarity=0.213 Sum_probs=223.9
Q ss_pred cccccCcEEEEEEcc-----CCCEEEEEcCCceEEEEeccCccccccceecccc--cccCCCeEEEEECCC----CCEEE
Q psy15549 77 LSRHQKAVNVVRFSP-----NGELLASGDDVGKEIWYLTERESGIANVEFASDL--SRHQKAVNVVRFSPN----GELLA 145 (621)
Q Consensus 77 ~~~h~~~V~~l~~sp-----dg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~i~~sp~----g~~l~ 145 (621)
...|..+|..++|++ .-..+|+++.+.+.+|........ ..++.. ..|......++|+-+ ..++|
T Consensus 34 ~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~~i----r~lq~y~D~d~~Esfytcsw~yd~~~~~p~la 109 (385)
T KOG1034|consen 34 KEDHNKPIFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGDGGI----RLLQSYADEDHDESFYTCSWSYDSNTGNPFLA 109 (385)
T ss_pred hccCCCccceeeeehhcCCCCCceEEEeCCcEEEEEEECCccce----eeeeeccCCCCCcceEEEEEEecCCCCCeeEE
Confidence 356889999999985 346778888889999998876421 112221 247778888899753 34899
Q ss_pred EEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCC
Q psy15549 146 SGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKG 224 (621)
Q Consensus 146 s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~ 224 (621)
.++.-|.|+|.|+.+++.. ..+.+|...|..+.++|+. +++++++.|..|++|++++.
T Consensus 110 ~~G~~GvIrVid~~~~~~~---------------------~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~ 168 (385)
T KOG1034|consen 110 AGGYLGVIRVIDVVSGQCS---------------------KNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTD 168 (385)
T ss_pred eecceeEEEEEecchhhhc---------------------cceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCC
Confidence 9999999999999999865 5668999999999999965 78999999999999999999
Q ss_pred cEEEEe---ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccc
Q psy15549 225 KNLGIL---TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSF 301 (621)
Q Consensus 225 ~~~~~~---~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (621)
.++..+ .+|.+.|.++.|+++|.+|++++.|.+|++|++...+....+.
T Consensus 169 ~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE---------------------------- 220 (385)
T KOG1034|consen 169 VCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLE---------------------------- 220 (385)
T ss_pred eEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhh----------------------------
Confidence 999887 5699999999999999999999999999999998655433332
Q ss_pred eeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCc-eecCCcccceeeeeccceeeecCCCCCCCCccCC
Q psy15549 302 FRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPA-VCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLP 380 (621)
Q Consensus 302 i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (621)
.+..|+|++...-... ... .-|. .....|..++-+++|-
T Consensus 221 -~s~~~~~~~t~~pfpt-------~~~--------------~fp~fst~diHrnyVDCvrw~------------------ 260 (385)
T KOG1034|consen 221 -LSITYSPNKTTRPFPT-------PKT--------------HFPDFSTTDIHRNYVDCVRWF------------------ 260 (385)
T ss_pred -hhcccCCCCccCcCCc-------ccc--------------ccccccccccccchHHHHHHH------------------
Confidence 2345666554321111 000 0000 0233466666666664
Q ss_pred CcEEEEEEcCCcEEEEeC-CCCce-------------eEEEecccccceEEEE--EcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 381 YRIVIAVATENNILLYDT-QHASP-------------FAFIANIHYTKLTDIT--WSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 381 ~~~l~~~~~dg~i~iwd~-~~~~~-------------~~~~~~~h~~~v~~~~--~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
+.++++-+-++.|..|-. .-.+. +..+ ......|+-+. |.|-++.||.|...|.|++||++..
T Consensus 261 gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~-~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ 339 (385)
T KOG1034|consen 261 GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEF-DYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNN 339 (385)
T ss_pred hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEe-ccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCC
Confidence 367777788889999976 22211 1111 11223455554 5566889999999999999999977
Q ss_pred cCC--cccCCC--CCcccccCCCCCCCCcccCCCcccHHHhc
Q psy15549 445 EIG--IPYVPP--SGEESKENDPTKGEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 445 ~~~--~~~~~~--~~~~~~~~~~~~~~~~~s~~~~~~~~~w~ 482 (621)
+.. .++..+ ...+....|+.|+..++...+++.|..|+
T Consensus 340 ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwd 381 (385)
T KOG1034|consen 340 EPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWD 381 (385)
T ss_pred CCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEE
Confidence 652 222222 23466678999999999888999888876
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-20 Score=169.79 Aligned_cols=216 Identities=22% Similarity=0.332 Sum_probs=160.8
Q ss_pred ccccccCcEEEEEEccCCCEEEEEc---CCceEEEEeccCcc---------ccccceecccccccCCCeEEEEECCC-CC
Q psy15549 76 DLSRHQKAVNVVRFSPNGELLASGD---DVGKEIWYLTERES---------GIANVEFASDLSRHQKAVNVVRFSPN-GE 142 (621)
Q Consensus 76 ~~~~h~~~V~~l~~spdg~~las~~---d~~v~iw~~~~~~~---------~~~~~~~~~~~~~h~~~V~~i~~sp~-g~ 142 (621)
....|.+.|+.+.-++-|+-.++++ .+.|+||++..... ......++.++.+|.+.=.+++|||- ..
T Consensus 146 ~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g 225 (440)
T KOG0302|consen 146 KSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTG 225 (440)
T ss_pred cccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccc
Confidence 3457888899998888765444443 77899999875321 11234667788899999999999992 23
Q ss_pred EEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEEC
Q psy15549 143 LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDV 221 (621)
Q Consensus 143 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~ 221 (621)
.|++|..-+.|++|...++.-... ...+.+|...|..++|||.. ..|++|+.||+|+|||+
T Consensus 226 ~LlsGDc~~~I~lw~~~~g~W~vd------------------~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDi 287 (440)
T KOG0302|consen 226 RLLSGDCVKGIHLWEPSTGSWKVD------------------QRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDI 287 (440)
T ss_pred ccccCccccceEeeeeccCceeec------------------CccccccccchhhhccCCccCceEEeeecCceEEEEEe
Confidence 588888888999999888653211 13456899999999999954 68999999999999999
Q ss_pred CCC---cEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCc
Q psy15549 222 HKG---KNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298 (621)
Q Consensus 222 ~~~---~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (621)
+.+ .++. .+.|.+.|..+.|+.+-.+||+|+.||+++|||++..+.- .++.....|
T Consensus 288 Rs~~~~~~~~-~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~--------------------~pVA~fk~H 346 (440)
T KOG0302|consen 288 RSGPKKAAVS-TKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSG--------------------QPVATFKYH 346 (440)
T ss_pred cCCCccceeE-eeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCC--------------------CcceeEEec
Confidence 988 3333 3789999999999998889999999999999999874421 112223356
Q ss_pred ccceeeeeecCCCCeEEeccccccCCCCCCcceeee
Q psy15549 299 KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 299 ~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
+.+|+++.|+|.....+.++| .|..+.+|++.
T Consensus 347 k~pItsieW~p~e~s~iaasg----~D~QitiWDls 378 (440)
T KOG0302|consen 347 KAPITSIEWHPHEDSVIAASG----EDNQITIWDLS 378 (440)
T ss_pred cCCeeEEEeccccCceEEecc----CCCcEEEEEee
Confidence 677899999987554433333 67777777765
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.7e-21 Score=190.41 Aligned_cols=294 Identities=18% Similarity=0.242 Sum_probs=217.0
Q ss_pred cccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccC
Q psy15549 3 CTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK 82 (621)
Q Consensus 3 ~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~ 82 (621)
+++..-+.+|...|+|+.|...|. ++++|+.|..|+ ||.+.+..+. +.+.||.+
T Consensus 180 mk~ikrLlgH~naVyca~fDrtg~-----~Iitgsdd~lvK--------------iwS~et~~~l-------As~rGhs~ 233 (1113)
T KOG0644|consen 180 MKNIKRLLGHRNAVYCAIFDRTGR-----YIITGSDDRLVK--------------IWSMETARCL-------ASCRGHSG 233 (1113)
T ss_pred HHHHHHHHhhhhheeeeeeccccc-----eEeecCccceee--------------eeeccchhhh-------ccCCCCcc
Confidence 455566788999999999999998 999999999999 9998877764 45999999
Q ss_pred cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 83 AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
.|+.++.+.+..++|+++ |.-|++|.+..+ .++..+.+|++.|++++|+|-. +.+.||++++||.+-.
T Consensus 234 ditdlavs~~n~~iaaaS~D~vIrvWrl~~~-------~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~ 302 (1113)
T KOG0644|consen 234 DITDLAVSSNNTMIAAASNDKVIRVWRLPDG-------APVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLE 302 (1113)
T ss_pred ccchhccchhhhhhhhcccCceEEEEecCCC-------chHHHHhccccceeeeccCccc----cCCCCCceEecccccc
Confidence 999999999999999999 667899999988 7788899999999999999953 7789999999998822
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 241 (621)
-.+..-.+. -.....-+.++.|..++..++|++.|+.-..|.+..-. .+...+.-+.
T Consensus 303 ~~~y~prp~-----------------~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~------~~~~~lif~t 359 (1113)
T KOG0644|consen 303 PRIYVPRPL-----------------KFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLA------WRSNLLIFVT 359 (1113)
T ss_pred ccccCCCCC-----------------CcccccceeeeeccccccccccccCCcccccchhhHhh------hhccceEEEe
Confidence 111110000 01122456778888888899999999998888764211 1211111122
Q ss_pred EcCC-CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 242 WDPK-NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 242 ~sp~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
++.+ ..+.+++-.+-.+.+|++.+|.++..+..+. ..+.-+.++|-+..+
T Consensus 360 ~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghs-----------------------d~~yvLd~Hpfn~ri------ 410 (1113)
T KOG0644|consen 360 RSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHS-----------------------DEVYVLDVHPFNPRI------ 410 (1113)
T ss_pred ccccccccceeeeeeeEeeeeecccchhhhhhcccc-----------------------cceeeeeecCCCcHh------
Confidence 2222 2456667777888899988887665443221 122334444444333
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
...++.||...|||+-.
T Consensus 411 ---------------------------------------------------------------~msag~dgst~iwdi~e 427 (1113)
T KOG0644|consen 411 ---------------------------------------------------------------AMSAGYDGSTIIWDIWE 427 (1113)
T ss_pred ---------------------------------------------------------------hhhccCCCceEeeeccc
Confidence 33456789999999999
Q ss_pred CceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcc
Q psy15549 401 ASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIP 449 (621)
Q Consensus 401 ~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~ 449 (621)
|.+++....+| ..+.+.+||+||+.++....-|.++|.....++....
T Consensus 428 g~pik~y~~gh-~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~s~k~ 475 (1113)
T KOG0644|consen 428 GIPIKHYFIGH-GKLVDGKFSQDGTSIALSDDHGQLYILGTGQSKSQKK 475 (1113)
T ss_pred CCcceeeeccc-ceeeccccCCCCceEecCCCCCceEEeccCCCccccc
Confidence 99888887765 5577889999999999998999999998876655443
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-18 Score=179.46 Aligned_cols=372 Identities=23% Similarity=0.386 Sum_probs=271.4
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccccc-CcEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ-KAVNV 86 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~ 86 (621)
....|...|.++.|.+.+. .++.++.|+.+. +|+....... ...+.++. ..+..
T Consensus 60 ~~~~~~~~i~~~~~~~~~~-----~~~~~~~d~~~~--------------~~~~~~~~~~------~~~~~~~~~~~~~~ 114 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGE-----LLLSGSSDGTIK--------------LWDLDNGEKL------IKSLEGLHDSSVSK 114 (466)
T ss_pred eeeeccceEEEEEECCCCc-----EEEEecCCCcEE--------------EEEcCCCcee------EEEEeccCCCceee
Confidence 4567889999999999998 999999999999 8887766411 11234433 36777
Q ss_pred EEE-ccCCC-EEEE-Ec-CCceEEEEecc-CccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CCcEEEEEccC
Q psy15549 87 VRF-SPNGE-LLAS-GD-DVGKEIWYLTE-RESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-ESTIIVWKQKT 160 (621)
Q Consensus 87 l~~-spdg~-~las-~~-d~~v~iw~~~~-~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg~i~vwd~~~ 160 (621)
+.+ ++++. +++. +. ++.+.+|+... . .....+..|...|..++|+|++.++++++. |+.+++|++..
T Consensus 115 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (466)
T COG2319 115 LALSSPDGNSILLASSSLDGTVKLWDLSTPG-------KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT 187 (466)
T ss_pred EEEECCCcceEEeccCCCCccEEEEEecCCC-------eEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCC
Confidence 777 88887 4444 33 77899999986 3 556778889999999999999998988886 99999999988
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEE-EeccCCcceE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST-HLISGSVDNTAIMWDVHKGKNLG-ILTEHKKFVQ 238 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~-~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~v~ 238 (621)
...+ ..+.+|...|.+++|+|++. .+++++.|+.|++||...+..+. .+..|....
T Consensus 188 ~~~~---------------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~- 245 (466)
T COG2319 188 GKPL---------------------STLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV- 245 (466)
T ss_pred CceE---------------------EeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-
Confidence 5543 55667999999999999998 55555899999999998888887 688887775
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCcee-eeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKV-ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
...|+|++.++++++.|+.+++|++..... +..+ ..+...+.++.|+|++..++++
T Consensus 246 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-----------------------~~~~~~v~~~~~~~~~~~~~~~ 302 (466)
T COG2319 246 VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTL-----------------------SGHSSSVLSVAFSPDGKLLASG 302 (466)
T ss_pred eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEE-----------------------ecCCccEEEEEECCCCCEEEEe
Confidence 448999998999999999999999987654 2222 1224567889999999888886
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE-EcCCcEEEE
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV-ATENNILLY 396 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~iw 396 (621)
+ .|+.+.+|+........... ...+...+..+.+.+ ++..++.+ ..|+.+.+|
T Consensus 303 ~-----~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~----------------~~~~~~~~~~~d~~~~~~ 356 (466)
T COG2319 303 S-----SDGTVRLWDLETGKLLSSLT-----LKGHEGPVSSLSFSP----------------DGSLLVSGGSDDGTIRLW 356 (466)
T ss_pred e-----CCCcEEEEEcCCCceEEEee-----ecccCCceEEEEECC----------------CCCEEEEeecCCCcEEee
Confidence 6 66778888654322111111 123333344444411 11344444 578899999
Q ss_pred eCCCCceeEEEecccccceEEEEEcCCCCeEEE-EeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCc
Q psy15549 397 DTQHASPFAFIANIHYTKLTDITWSSDGKVLIA-SSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKP 475 (621)
Q Consensus 397 d~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s-~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 475 (621)
+........... ....+..+.+++ ...++. +..++.+.+|+................+....+.+++..+++...+
T Consensus 357 ~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (466)
T COG2319 357 DLRTGKPLKTLE--GHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSD 433 (466)
T ss_pred ecCCCceeEEec--CCceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCC
Confidence 999887333332 222388999999 544444 6899999999999888776666554455566777777777777778
Q ss_pred ccHHHhcccC
Q psy15549 476 RSAEQAKGEG 485 (621)
Q Consensus 476 ~~~~~w~~~~ 485 (621)
..++.|....
T Consensus 434 ~~~~~~~~~~ 443 (466)
T COG2319 434 NTIRLWDLKT 443 (466)
T ss_pred CcEEEEeccC
Confidence 8888887655
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-19 Score=160.91 Aligned_cols=212 Identities=20% Similarity=0.325 Sum_probs=173.7
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
-..+|+|.||++|+. .+|++-....|. |+...... .++...++..|...|++++|+|
T Consensus 9 ~~~pitchAwn~drt-----~iAv~~~~~evh--------------iy~~~~~~----~w~~~htls~Hd~~vtgvdWap 65 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRT-----QIAVSPNNHEVH--------------IYSMLGAD----LWEPAHTLSEHDKIVTGVDWAP 65 (361)
T ss_pred ccCceeeeeecCCCc-----eEEeccCCceEE--------------EEEecCCC----CceeceehhhhCcceeEEeecC
Confidence 457999999999998 999999999999 77766554 2455778999999999999999
Q ss_pred CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 92 NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 92 dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
..+.|++++ |++-.+|....+. .+++...+..+...++++.|+|.++.||+|+....|.||-++....
T Consensus 66 ~snrIvtcs~drnayVw~~~~~~----~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENd------- 134 (361)
T KOG1523|consen 66 KSNRIVTCSHDRNAYVWTQPSGG----TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQEND------- 134 (361)
T ss_pred CCCceeEccCCCCccccccCCCC----eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccc-------
Confidence 999999988 9999999995443 3355666778899999999999999999999999999998876643
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC-----C-------------CcEEEEecc
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH-----K-------------GKNLGILTE 232 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~-----~-------------~~~~~~~~~ 232 (621)
-|.....-..+.+.|++++|+|++-+|++|+.|+.++|+..- . |+.+..+..
T Consensus 135 ----------WWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~ 204 (361)
T KOG1523|consen 135 ----------WWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASS 204 (361)
T ss_pred ----------eehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhcc
Confidence 122334445788999999999999999999999999999642 1 122233334
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCce
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKK 267 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~ 267 (621)
..+.+..+.|+|.|..|+-.+.|+.+.+-|.....
T Consensus 205 ~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 205 SGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred CCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 56789999999999999999999999999986654
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-19 Score=160.46 Aligned_cols=291 Identities=17% Similarity=0.218 Sum_probs=195.7
Q ss_pred eEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccc-ccCcEEEEEEc----
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSR-HQKAVNVVRFS---- 90 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~s---- 90 (621)
...+.|+|||. .|.+-+.|..+++|.+... +++-..... ...+....++- ....|...+|-
T Consensus 52 ~kgckWSPDGS-----ciL~~sedn~l~~~nlP~d-------lys~~~~~~--~~~~~~~~~r~~eg~tvydy~wYs~M~ 117 (406)
T KOG2919|consen 52 LKGCKWSPDGS-----CILSLSEDNCLNCWNLPFD-------LYSKKADGP--LNFSKHLSYRYQEGETVYDYCWYSRMK 117 (406)
T ss_pred hccceeCCCCc-----eEEeecccCeeeEEecChh-------hcccCCCCc--cccccceeEEeccCCEEEEEEeeeccc
Confidence 34678999998 9999999999994443322 111111110 01111111111 13467777774
Q ss_pred ---cCCCEEEEEc-CCceEEEEeccCccccccceecccccccCC---CeEEEEECCCCCEEEEEeCCCcEEEEEc-cCCC
Q psy15549 91 ---PNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQK---AVNVVRFSPNGELLASGDDESTIIVWKQ-KTDQ 162 (621)
Q Consensus 91 ---pdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~---~V~~i~~sp~g~~l~s~s~dg~i~vwd~-~~~~ 162 (621)
|+..++|+.+ +.-|++||.-+++. ........|.. ...+++|+|||.+|++|. ...|+++|+ +.+.
T Consensus 118 s~qP~t~l~a~ssr~~PIh~wdaftG~l-----raSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr 191 (406)
T KOG2919|consen 118 SDQPSTNLFAVSSRDQPIHLWDAFTGKL-----RASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGR 191 (406)
T ss_pred cCCCccceeeeccccCceeeeecccccc-----ccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCC
Confidence 5667777777 88899999998832 22222223433 345899999999998775 568999998 4443
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 241 (621)
.-..++. +.+-..+..+-|.|++|+| +.+.++.|+....+-||.-..+.++..+-+|.+.|+.++
T Consensus 192 ~c~vy~t--------------~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~ 257 (406)
T KOG2919|consen 192 DCPVYTT--------------VTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQ 257 (406)
T ss_pred CCcchhh--------------hhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEE
Confidence 3221100 0011234567899999999 566999999999999999999999999999999999999
Q ss_pred EcCCCCEEEEEeC-CCcEEEEEccCce-eeeecccCCCCCCCccccccccccccccCCcccceeee--eecCCCCeEEec
Q psy15549 242 WDPKNQYVATLSS-DRSLRTYSIQSKK-VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL--TFSPDGQLLIAP 317 (621)
Q Consensus 242 ~sp~~~~l~s~~~-dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~spdg~~l~~~ 317 (621)
|.++|+.|++|+. |-.|..||++.-. .+..+..+.... -..+ ...|
T Consensus 258 ~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~T----------------------NQRI~FDld~-------- 307 (406)
T KOG2919|consen 258 WCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDT----------------------NQRILFDLDP-------- 307 (406)
T ss_pred eccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCc----------------------cceEEEecCC--------
Confidence 9999999999886 6789999998643 332222111000 0111 1122
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEe
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYD 397 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 397 (621)
.+++|++|+.+|.|++||
T Consensus 308 --------------------------------------------------------------~~~~LasG~tdG~V~vwd 325 (406)
T KOG2919|consen 308 --------------------------------------------------------------KGEILASGDTDGSVRVWD 325 (406)
T ss_pred --------------------------------------------------------------CCceeeccCCCccEEEEe
Confidence 345566666899999999
Q ss_pred CCC-CceeEEEecccccceEEEEEcCCCCeEEEEeCC
Q psy15549 398 TQH-ASPFAFIANIHYTKLTDITWSSDGKVLIASSTD 433 (621)
Q Consensus 398 ~~~-~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~d 433 (621)
+.+ +..+..+ ..|...|+.++++|--..+||++..
T Consensus 326 lk~~gn~~sv~-~~~sd~vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 326 LKDLGNEVSVT-GNYSDTVNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred cCCCCCccccc-ccccccccceecCcccceeeeccCc
Confidence 988 6655555 4588999999999998888888653
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-20 Score=161.73 Aligned_cols=291 Identities=21% Similarity=0.283 Sum_probs=202.8
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccc--ccceeeccccc-cccC
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESG--IANVEFASDLS-RHQK 82 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~--~~~~~~~~~~~-~h~~ 82 (621)
.....||.+.|+.++-+|..+ ..|+|+..+- ...+.+...-||.+...... ...++.+..+. .+-+
T Consensus 56 skvf~h~agEvw~las~P~d~----~ilaT~yn~~-------s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg 124 (370)
T KOG1007|consen 56 SKVFFHHAGEVWDLASSPFDQ----RILATVYNDT-------SDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVG 124 (370)
T ss_pred hhhhhcCCcceehhhcCCCCC----ceEEEEEecc-------CCCcceeeEEEEecccccCccccchhhHhhcCCHHHhC
Confidence 456789999999999999876 4777765421 00111122338988754332 23345555565 5667
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECC--CCCEEEEEeCCCcEEEEEccC
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--NGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp--~g~~l~s~s~dg~i~vwd~~~ 160 (621)
.|.|+.|.|++..|++-.+..|.+|++.........+.... -..|....++-+|+| +|+.+++.+ |+++..||+++
T Consensus 125 ~i~cvew~Pns~klasm~dn~i~l~~l~ess~~vaev~ss~-s~e~~~~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT 202 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMDDNNIVLWSLDESSKIVAEVLSSE-SAEMRHSFTSGAWSPHHDGNQVATTS-DSTLQFWDLRT 202 (370)
T ss_pred ceeeEEEcCCCCeeEEeccCceEEEEcccCcchheeecccc-cccccceecccccCCCCccceEEEeC-CCcEEEEEccc
Confidence 99999999999999999999999999988754222222111 223667788899999 788887765 78999999999
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCC-CcEEEEeccCCcceE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST-HLISGSVDNTAIMWDVHK-GKNLGILTEHKKFVQ 238 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~-~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~ 238 (621)
..+.. .....|...|..+.|+|+.+ +|++|+.||.|++||.+. ..++..+.+|...|.
T Consensus 203 ~~~~~--------------------sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW 262 (370)
T KOG1007|consen 203 MKKNN--------------------SIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVW 262 (370)
T ss_pred hhhhc--------------------chhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEE
Confidence 88753 33468999999999999765 678899999999999985 457889999999999
Q ss_pred EEEEcCC-CCEEEEEeCCCcEEEEEccCceeeeecc-cCCCCCCCccccccccccc-----cccCCcccceeeeeecCCC
Q psy15549 239 GVAWDPK-NQYVATLSSDRSLRTYSIQSKKVISRAC-RSKLPVDSSHELFDKVVPL-----FHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 239 ~l~~sp~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~~~spdg 311 (621)
++.|+|. .+++++++.|..|.+|...+-....++. ..+......+....+..++ ...+.+...|.+++||.-.
T Consensus 263 ~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsad 342 (370)
T KOG1007|consen 263 AVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSAD 342 (370)
T ss_pred EEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCC
Confidence 9999994 5678899999999999875433222221 1111111111111111122 2345678889999999877
Q ss_pred CeEE-eccccccCCCCCCcceeee
Q psy15549 312 QLLI-APSGCLENSDSTRKPISVT 334 (621)
Q Consensus 312 ~~l~-~~s~~~~~~d~~i~~~~~~ 334 (621)
.+++ +-+ +||.+.+-++.
T Consensus 343 PWiFASLS-----YDGRviIs~V~ 361 (370)
T KOG1007|consen 343 PWIFASLS-----YDGRVIISSVP 361 (370)
T ss_pred CeeEEEec-----cCceEEeecCC
Confidence 7654 444 78877665543
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.5e-20 Score=171.35 Aligned_cols=275 Identities=17% Similarity=0.237 Sum_probs=190.6
Q ss_pred ceeeecCCCC----eEEEeccccc--cCCcceEEEEecCCceEEeeeccCccccccceeEEecccc--ccccceeecccc
Q psy15549 6 PEISWHNRDP----VLSVDIQLKQ--EKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERE--SGIANVEFASDL 77 (621)
Q Consensus 6 ~~~~~~h~~~----v~~l~~spd~--~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~--~~~~~~~~~~~~ 77 (621)
+.+..||.-- -.|++|...+ ....++++|.|..|..|.|||+.......- ..-+.... .....-+.....
T Consensus 162 ~nlYvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P--~~~LGs~~sk~~~k~~k~~~~~ 239 (463)
T KOG0270|consen 162 ENLYVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLP--CVTLGSKASKKKKKKGKRSNSA 239 (463)
T ss_pred cceeEecceeccCcchhhhhhhcCCCCCCCcceEEEeccCceeEEecccccccccc--ceeechhhhhhhhhhccccccc
Confidence 4566677432 2566665432 223467999999999999555542222100 00000000 000000001124
Q ss_pred ccccCcEEEEEEccC-CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEE
Q psy15549 78 SRHQKAVNVVRFSPN-GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTII 154 (621)
Q Consensus 78 ~~h~~~V~~l~~spd-g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~ 154 (621)
.+|++.|.+++|+.. .+.||+|+ |.+|++||+..+ ++...+..|.+.|.+++|+| ...+|++|+.|++|.
T Consensus 240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g-------~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~ 312 (463)
T KOG0270|consen 240 SGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTG-------KPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVA 312 (463)
T ss_pred ccchHHHHHHHhccccceeEEecCCCceEEEEEcCCC-------CcceehhhcCCceeEEEecCCCceEEEeccccceEE
Confidence 579999999999985 46788888 999999999998 77788888999999999999 567999999999999
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCC-cEEEEecc
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKG-KNLGILTE 232 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~-~~~~~~~~ 232 (621)
+.|.+...... ..-...+.|-.++|.|.. ..++++..||+|+-+|++.. +++.+++.
T Consensus 313 l~D~R~~~~s~---------------------~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~A 371 (463)
T KOG0270|consen 313 LKDCRDPSNSG---------------------KEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKA 371 (463)
T ss_pred eeeccCccccC---------------------ceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEe
Confidence 99998633221 111345678999999955 56778888999999999975 89999999
Q ss_pred CCcceEEEEEcCCC-CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC
Q psy15549 233 HKKFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 233 ~~~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 311 (621)
|.++|.++++++.- .++++++.|+.|++|++......... .+.. .-+...|+++.|+-
T Consensus 372 Hd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~-~~~~--------------------~~~rl~c~~~~~~~ 430 (463)
T KOG0270|consen 372 HDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVK-EHSF--------------------KLGRLHCFALDPDV 430 (463)
T ss_pred ccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccc-cccc--------------------cccceeecccCCCc
Confidence 99999999999854 56888999999999998653321110 0000 01124788888887
Q ss_pred CeEEeccccccCCCCCCcceeeee
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTH 335 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~ 335 (621)
.++++.+| ..+.+++|++..
T Consensus 431 a~~la~GG----~k~~~~vwd~~~ 450 (463)
T KOG0270|consen 431 AFTLAFGG----EKAVLRVWDIFT 450 (463)
T ss_pred ceEEEecC----ccceEEEeeccc
Confidence 76665554 566789998763
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.8e-19 Score=171.14 Aligned_cols=154 Identities=27% Similarity=0.434 Sum_probs=122.9
Q ss_pred CCeEEEEECC-CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEE
Q psy15549 130 KAVNVVRFSP-NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHL 207 (621)
Q Consensus 130 ~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l 207 (621)
..|+.+.|.| |...||+++.||.|++|.+..+...... ......+..|...|+++.|+| ....|
T Consensus 628 t~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~--------------~tPe~~lt~h~eKI~slRfHPLAadvL 693 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENE--------------MTPEKILTIHGEKITSLRFHPLAADVL 693 (1012)
T ss_pred ceeeecccCCCChHHeeecccCceEEEEEeccCCCCccc--------------CCcceeeecccceEEEEEecchhhhHh
Confidence 4577888999 7779999999999999999877543211 112367889999999999999 45789
Q ss_pred EEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccc
Q psy15549 208 ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFD 287 (621)
Q Consensus 208 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (621)
++++.|.+|++||+.+++....+.+|.+.|..++|||+|+.+++.+.||+|++|+.+++..-- .....++
T Consensus 694 a~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv--~Eg~gpv-------- 763 (1012)
T KOG1445|consen 694 AVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPV--YEGKGPV-------- 763 (1012)
T ss_pred hhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCcc--ccCCCCc--------
Confidence 999999999999999999999999999999999999999999999999999999998765321 1111111
Q ss_pred ccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 288 KVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 288 ~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
...--.+.|.-||+++++.+
T Consensus 764 -----------gtRgARi~wacdgr~viv~G 783 (1012)
T KOG1445|consen 764 -----------GTRGARILWACDGRIVIVVG 783 (1012)
T ss_pred -----------cCcceeEEEEecCcEEEEec
Confidence 11224677888888877765
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-20 Score=193.06 Aligned_cols=306 Identities=19% Similarity=0.299 Sum_probs=214.0
Q ss_pred EEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCE-
Q psy15549 17 LSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGEL- 95 (621)
Q Consensus 17 ~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~- 95 (621)
-.+||+|++. .+||+|..-+.+ |..- ....+..||.+....... .+++...+. -...-+.++|.+.|..
T Consensus 10 a~~awSp~~~----~~laagt~aq~~---D~sf-st~~slEifeld~~~~~~-dlk~~~s~~-s~~rF~kL~W~~~g~~~ 79 (1049)
T KOG0307|consen 10 ATFAWSPASP----PLLAAGTAAQQF---DASF-STSASLEIFELDFSDESS-DLKPVGSLQ-SSNRFNKLAWGSYGSHS 79 (1049)
T ss_pred ceEEecCCCc----hhhHHHhhhhcc---cccc-ccccccceeeecccCccc-ccccccccc-ccccceeeeecccCCCc
Confidence 4578999886 577777654433 2111 111222266655332211 111122222 2456789999997765
Q ss_pred ---EEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 96 ---LASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 96 ---las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
||.|. ||+|.+|+...- ........+.+...|.+.|..+.|++. +++||+|+.||.|.|||+...+......
T Consensus 80 ~GlIaGG~edG~I~ly~p~~~-~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~-- 156 (1049)
T KOG0307|consen 80 HGLIAGGLEDGNIVLYDPASI-IANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG-- 156 (1049)
T ss_pred cceeeccccCCceEEecchhh-ccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC--
Confidence 66665 888999998763 111123567778899999999999995 5599999999999999998865432220
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEeccCCc--ceEEEEEcCCC-
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHKGKNLGILTEHKK--FVQGVAWDPKN- 246 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--~v~~l~~sp~~- 246 (621)
-......|.+++|+.. ...|++++.+|.+.|||++..+.+..+..+.. .+..++|+|+.
T Consensus 157 -----------------~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~a 219 (1049)
T KOG0307|consen 157 -----------------SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHA 219 (1049)
T ss_pred -----------------CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCc
Confidence 1235678999999984 45688888899999999999888877766544 46789999987
Q ss_pred CEEEEEeCCC---cEEEEEccCce-eeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 247 QYVATLSSDR---SLRTYSIQSKK-VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 247 ~~l~s~~~dg---~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
..|++++.|. .|.+||+|.-. .++.+ ..|...|.++.|++.+..+
T Consensus 220 Tql~~As~dd~~PviqlWDlR~assP~k~~-----------------------~~H~~GilslsWc~~D~~l-------- 268 (1049)
T KOG0307|consen 220 TQLLVASGDDSAPVIQLWDLRFASSPLKIL-----------------------EGHQRGILSLSWCPQDPRL-------- 268 (1049)
T ss_pred eeeeeecCCCCCceeEeecccccCCchhhh-----------------------cccccceeeeccCCCCchh--------
Confidence 4466666653 69999987532 22222 2344556777777665333
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
+++++.|+.|.+|+..+++
T Consensus 269 -------------------------------------------------------------llSsgkD~~ii~wN~~tgE 287 (1049)
T KOG0307|consen 269 -------------------------------------------------------------LLSSGKDNRIICWNPNTGE 287 (1049)
T ss_pred -------------------------------------------------------------hhcccCCCCeeEecCCCce
Confidence 3444578999999999999
Q ss_pred eeEEEecccccceEEEEEcCCCC-eEEEEeCCCcEEEEEecCCc
Q psy15549 403 PFAFIANIHYTKLTDITWSSDGK-VLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 403 ~~~~~~~~h~~~v~~~~~spdg~-~l~s~s~dg~i~iw~~~~~~ 445 (621)
.+..+.. ..+.+..+.|.|..- .|+.++-||.|.|+.+.++.
T Consensus 288 vl~~~p~-~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 288 VLGELPA-QGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred EeeecCC-CCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 9999865 678999999999766 78888999999999998654
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=179.07 Aligned_cols=283 Identities=20% Similarity=0.273 Sum_probs=196.4
Q ss_pred eeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccC-ccccccceecccccccCCCeEEEEECCCCCEEEEEe
Q psy15549 71 VEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTER-ESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD 148 (621)
Q Consensus 71 ~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~-~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s 148 (621)
+.+..++..|.+.|+.++|.|....|++++ ++.+.+|++... ......+.++.++.+|.++|.|+++.+++..+++|+
T Consensus 284 w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg 363 (577)
T KOG0642|consen 284 WNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGG 363 (577)
T ss_pred cceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeec
Confidence 344447889999999999999999999999 888999999431 122335688889999999999999999999999999
Q ss_pred CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Q psy15549 149 DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLG 228 (621)
Q Consensus 149 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~ 228 (621)
.||+|+.|++......... .........+.||...|+.+++|+....|++++.||++++|+.....+ .
T Consensus 364 ~Dg~I~~w~~p~n~dp~ds-----------~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~ 431 (577)
T KOG0642|consen 364 IDGTIRCWNLPPNQDPDDS-----------YDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-C 431 (577)
T ss_pred cCceeeeeccCCCCCcccc-----------cCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-c
Confidence 9999999987633211100 001112356789999999999999999999999999999999866655 3
Q ss_pred EeccC--CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeee---ecccCCCCCCCccccccccccccccCCccccee
Q psy15549 229 ILTEH--KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVIS---RACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303 (621)
Q Consensus 229 ~~~~~--~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 303 (621)
++... .+...++.+-.. .++-...+..+..+++.+.+... .+.....+... ....+.
T Consensus 432 ~f~~~~e~g~Plsvd~~ss--~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~----------------~~~~in 493 (577)
T KOG0642|consen 432 TFGEPKEHGYPLSVDRTSS--RPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPR----------------RYPQIN 493 (577)
T ss_pred ccCCccccCCcceEeeccc--hhHhhhhhcccccccchhhhhhhheeeccccCCCccc----------------ccCccc
Confidence 33322 223344555322 22222233344444444333322 22111000000 000011
Q ss_pred eeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcE
Q psy15549 304 RLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRI 383 (621)
Q Consensus 304 ~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (621)
.+.+.| ...+
T Consensus 494 ~vVs~~----------------------------------------------------------------------~~~~ 503 (577)
T KOG0642|consen 494 KVVSHP----------------------------------------------------------------------TADI 503 (577)
T ss_pred eEEecC----------------------------------------------------------------------CCCe
Confidence 111111 3356
Q ss_pred EEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCC
Q psy15549 384 VIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 384 l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
.+++..|+.|+++|..+++++.... .|...++++++.|+|-+|++++.||.+++|.++...+......|.
T Consensus 504 ~~~~hed~~Ir~~dn~~~~~l~s~~-a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 504 TFTAHEDRSIRFFDNKTGKILHSMV-AHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred eEecccCCceecccccccccchhee-eccceecceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence 6777789999999999999998884 699999999999999999999999999999998777766655543
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.8e-19 Score=153.80 Aligned_cols=300 Identities=22% Similarity=0.322 Sum_probs=198.0
Q ss_pred eEEeccccccccceeeccccccccCcEEEEEEcc-CCCEEEEEc----C----CceEEEEeccCccc--cccceeccccc
Q psy15549 58 IWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGD----D----VGKEIWYLTERESG--IANVEFASDLS 126 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~las~~----d----~~v~iw~~~~~~~~--~~~~~~~~~~~ 126 (621)
+-++........ ...|..|.+.|..++-+| +.++|+++. + .+..||.+...... ...++.+..+.
T Consensus 44 ll~~d~e~s~l~----skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ld 119 (370)
T KOG1007|consen 44 LLRLDSEGSELL----SKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLD 119 (370)
T ss_pred EEEecCccchhh----hhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCC
Confidence 555554433222 345778899999999999 556677653 2 23589999865432 22234444444
Q ss_pred -ccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC-CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC--
Q psy15549 127 -RHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL-PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-- 202 (621)
Q Consensus 127 -~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-- 202 (621)
.+-+.|.|+.|.|++..+++-. |..|.+|++.....+ ..+.. ..-..|....++-+|+|
T Consensus 120 teavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~s----------------s~s~e~~~~ftsg~WspHH 182 (370)
T KOG1007|consen 120 TEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLS----------------SESAEMRHSFTSGAWSPHH 182 (370)
T ss_pred HHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecc----------------cccccccceecccccCCCC
Confidence 4556899999999999988876 788999999988763 22211 11123566788899999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCcceEEEEEcCCCC-EEEEEeCCCcEEEEEccCceeeeecccCCCCCC
Q psy15549 203 TSTHLISGSVDNTAIMWDVHKGKNLGIL-TEHKKFVQGVAWDPKNQ-YVATLSSDRSLRTYSIQSKKVISRACRSKLPVD 280 (621)
Q Consensus 203 d~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~v~~l~~sp~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 280 (621)
|++.+++.+ |++++.||+++..+...+ .+|...|..+.|+|+-+ +|++|+.||.|+|||.+.-+
T Consensus 183 dgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk------------- 248 (370)
T KOG1007|consen 183 DGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK------------- 248 (370)
T ss_pred ccceEEEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCC-------------
Confidence 888888766 899999999998887766 46888899999999875 48899999999999998643
Q ss_pred CccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeee
Q psy15549 281 SSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVK 360 (621)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (621)
.+++...+|..++.++.|+|.-..|+..++ .|..+.+|............. .+........
T Consensus 249 ---------~pv~el~~HsHWvW~VRfn~~hdqLiLs~~----SDs~V~Lsca~svSSE~qi~~------~~dese~e~~ 309 (370)
T KOG1007|consen 249 ---------FPVQELPGHSHWVWAVRFNPEHDQLILSGG----SDSAVNLSCASSVSSEQQIEF------EDDESESEDE 309 (370)
T ss_pred ---------ccccccCCCceEEEEEEecCccceEEEecC----CCceeEEEecccccccccccc------ccccccCcch
Confidence 234456677889999999997655544443 788888876553322111000 0000000000
Q ss_pred ccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCe-EEEEeCCCcEEEE
Q psy15549 361 CCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKV-LIASSTDGYCSII 439 (621)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~-l~s~s~dg~i~iw 439 (621)
.....++ -+.+ ..+.++ ..|...|.+++||.-..+ +|+-+.||.+.|=
T Consensus 310 ---------------------------dseer~k--pL~d-g~l~ty-dehEDSVY~~aWSsadPWiFASLSYDGRviIs 358 (370)
T KOG1007|consen 310 ---------------------------DSEERVK--PLQD-GQLETY-DEHEDSVYALAWSSADPWIFASLSYDGRVIIS 358 (370)
T ss_pred ---------------------------hhHHhcc--cccc-cccccc-cccccceEEEeeccCCCeeEEEeccCceEEee
Confidence 0000000 0111 123334 359999999999986664 6677999999886
Q ss_pred Eec
Q psy15549 440 SFG 442 (621)
Q Consensus 440 ~~~ 442 (621)
.+.
T Consensus 359 ~V~ 361 (370)
T KOG1007|consen 359 SVP 361 (370)
T ss_pred cCC
Confidence 654
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.4e-20 Score=177.27 Aligned_cols=284 Identities=17% Similarity=0.240 Sum_probs=208.0
Q ss_pred cccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEEC
Q psy15549 122 ASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS 201 (621)
Q Consensus 122 ~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s 201 (621)
...+.+|++.|.+|...|.|.+|++|+.||+|+||.+.++.++..+ ...+.|.|++|+
T Consensus 393 ~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~----------------------~~d~~I~~vaw~ 450 (733)
T KOG0650|consen 393 ALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTV----------------------QFDSEIRSVAWN 450 (733)
T ss_pred eeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEE----------------------eecceeEEEEec
Confidence 3446899999999999999999999999999999999999986433 234579999999
Q ss_pred CCCC--EEEEEeCCCeEEEEECCCC------------------------------------c-EEEEeccCCcceEEEEE
Q psy15549 202 PTST--HLISGSVDNTAIMWDVHKG------------------------------------K-NLGILTEHKKFVQGVAW 242 (621)
Q Consensus 202 pd~~--~l~s~~~dg~i~vwd~~~~------------------------------------~-~~~~~~~~~~~v~~l~~ 242 (621)
|.+. .||++-... +.|.+..-| + -+...-.|...|..+.|
T Consensus 451 P~~~~~vLAvA~~~~-~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtW 529 (733)
T KOG0650|consen 451 PLSDLCVLAVAVGEC-VLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTW 529 (733)
T ss_pred CCCCceeEEEEecCc-eEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeee
Confidence 9664 444443332 444432211 0 01222347788999999
Q ss_pred cCCCCEEEEEeCC---CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccc
Q psy15549 243 DPKNQYVATLSSD---RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSG 319 (621)
Q Consensus 243 sp~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~ 319 (621)
+..|.||++...+ ..|.|+++.......-+. ..++.+.++.|+|...+|++++
T Consensus 530 HrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~-----------------------kskG~vq~v~FHPs~p~lfVaT- 585 (733)
T KOG0650|consen 530 HRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFR-----------------------KSKGLVQRVKFHPSKPYLFVAT- 585 (733)
T ss_pred ecCCceEEEeccCCCcceEEEEecccccccCchh-----------------------hcCCceeEEEecCCCceEEEEe-
Confidence 9999999987764 468888887655433332 2345678999999999998887
Q ss_pred cccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCC
Q psy15549 320 CLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQ 399 (621)
Q Consensus 320 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 399 (621)
...+++|++.... .+..+......+..+..+| .|..|++++.|+.+..||+.
T Consensus 586 -----q~~vRiYdL~kqe-------lvKkL~tg~kwiS~msihp----------------~GDnli~gs~d~k~~WfDld 637 (733)
T KOG0650|consen 586 -----QRSVRIYDLSKQE-------LVKKLLTGSKWISSMSIHP----------------NGDNLILGSYDKKMCWFDLD 637 (733)
T ss_pred -----ccceEEEehhHHH-------HHHHHhcCCeeeeeeeecC----------------CCCeEEEecCCCeeEEEEcc
Confidence 5788888876421 1222333344455555555 67889999999999999998
Q ss_pred CCc-eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec--C----Cc---CCcccCCCCCc----ccccCCCCC
Q psy15549 400 HAS-PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG--D----NE---IGIPYVPPSGE----ESKENDPTK 465 (621)
Q Consensus 400 ~~~-~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~--~----~~---~~~~~~~~~~~----~~~~~~~~~ 465 (621)
-.. +.+.+ ..|...|++++|++.-.+|++|+.||++.||.-. + .- .+..+.+|... +....|+|.
T Consensus 638 lsskPyk~l-r~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~ 716 (733)
T KOG0650|consen 638 LSSKPYKTL-RLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPR 716 (733)
T ss_pred cCcchhHHh-hhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCC
Confidence 764 44444 5699999999999999999999999999999633 1 11 22344555443 666679999
Q ss_pred CCCcccCCCcccHHHh
Q psy15549 466 GEPVRSEDKPRSAEQA 481 (621)
Q Consensus 466 ~~~~~s~~~~~~~~~w 481 (621)
...+++++.++.+++|
T Consensus 717 qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 717 QPWLFSAGADGTIRLF 732 (733)
T ss_pred CceEEecCCCceEEee
Confidence 9999999999999987
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=175.63 Aligned_cols=271 Identities=15% Similarity=0.244 Sum_probs=204.0
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
.|..++|-|||. .|+.+..+. +. +||.+++..... +++|.+.|+|++|+.||+
T Consensus 14 ci~d~afkPDGs-----qL~lAAg~r-ll--------------iyD~ndG~llqt-------LKgHKDtVycVAys~dGk 66 (1081)
T KOG1538|consen 14 CINDIAFKPDGT-----QLILAAGSR-LL--------------VYDTSDGTLLQP-------LKGHKDTVYCVAYAKDGK 66 (1081)
T ss_pred chheeEECCCCc-----eEEEecCCE-EE--------------EEeCCCcccccc-------cccccceEEEEEEccCCc
Confidence 799999999998 777776664 44 899998876554 999999999999999999
Q ss_pred EEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcc
Q psy15549 95 LLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLD 173 (621)
Q Consensus 95 ~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~ 173 (621)
.+|+|+ |..|.+|.-.-.+ .+ -..|.+.|.|+.|+|-...|++|+.. ..-+|........
T Consensus 67 rFASG~aDK~VI~W~~klEG-------~L--kYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~--------- 127 (1081)
T KOG1538|consen 67 RFASGSADKSVIIWTSKLEG-------IL--KYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVS--------- 127 (1081)
T ss_pred eeccCCCceeEEEecccccc-------ee--eeccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHH---------
Confidence 999998 8889999876542 11 13599999999999999999999864 4678876655421
Q ss_pred cccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe---ccCCcceEEEEEcCCC----
Q psy15549 174 EENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL---TEHKKFVQGVAWDPKN---- 246 (621)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~---~~~~~~v~~l~~sp~~---- 246 (621)
-......|.+++|..||++|+.|-.+|+|.+-+- +++....+ -+...+|.+++|+|..
T Consensus 128 --------------K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~ 192 (1081)
T KOG1538|consen 128 --------------KHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSICWNPSSGEGR 192 (1081)
T ss_pred --------------hhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeCCCCCCCCceEEEecCCCCCCc
Confidence 1223467889999999999999999999999975 44443333 2467799999999964
Q ss_pred -CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCC
Q psy15549 247 -QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSD 325 (621)
Q Consensus 247 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d 325 (621)
..+++.....++.+|.+.. +.+..- ..+.-...++.+.++|.|++.++ .|
T Consensus 193 ~di~aV~DW~qTLSFy~LsG-~~Igk~-----------------------r~L~FdP~CisYf~NGEy~LiGG-----sd 243 (1081)
T KOG1538|consen 193 NDILAVADWGQTLSFYQLSG-KQIGKD-----------------------RALNFDPCCISYFTNGEYILLGG-----SD 243 (1081)
T ss_pred cceEEEEeccceeEEEEecc-eeeccc-----------------------ccCCCCchhheeccCCcEEEEcc-----CC
Confidence 5678888888888888754 322211 01111236899999999999998 78
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCC
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQ 399 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 399 (621)
+.+.++...... ...+.....++..+...| ++..++.|+.||+|.-|++.
T Consensus 244 k~L~~fTR~Gvr--------LGTvg~~D~WIWtV~~~P----------------NsQ~v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 244 KQLSLFTRDGVR--------LGTVGEQDSWIWTVQAKP----------------NSQYVVVGCQDGTIACYNLI 293 (1081)
T ss_pred CceEEEeecCeE--------EeeccccceeEEEEEEcc----------------CCceEEEEEccCeeehhhhH
Confidence 888777644222 223334556777777776 67899999999999998853
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.1e-20 Score=174.81 Aligned_cols=244 Identities=21% Similarity=0.305 Sum_probs=188.1
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccc-ccccceeeccccccccCcEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERE-SGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~-~~~~~~~~~~~~~~h~~~V~~l 87 (621)
+..|.+.|++++|+|-.. .|++|+.||.+. +|++.... .....++++.++.+|.++|.|+
T Consensus 290 l~s~~d~ir~l~~~~sep-----~lit~sed~~lk--------------~WnLqk~~~s~~~~~epi~tfraH~gPVl~v 350 (577)
T KOG0642|consen 290 LRSHDDCIRALAFHPSEP-----VLITASEDGTLK--------------LWNLQKAKKSAEKDVEPILTFRAHEGPVLCV 350 (577)
T ss_pred eecchhhhhhhhcCCCCC-----eEEEeccccchh--------------hhhhcccCCccccceeeeEEEecccCceEEE
Confidence 455888999999999998 999999999999 88883311 1223567788999999999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccc---eecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANV---EFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~---~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
++++++..+.+|+ |+.|+.|++.........+ .....+.||++.|+.+++|+....|++|+.||++++|+......
T Consensus 351 ~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~ 430 (577)
T KOG0642|consen 351 VVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP 430 (577)
T ss_pred EecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc
Confidence 9999999999999 9999999887432222112 44566889999999999999888999999999999999776655
Q ss_pred CCCCCCCCccccc--cccc-------------------ceee---eeeec-------CCCCCeEEEEECCCCCEEEEEeC
Q psy15549 164 LPEFPSSNLDEEN--VNKE-------------------HWIV---TKILR-------GHLEDVYDISWSPTSTHLISGSV 212 (621)
Q Consensus 164 ~~~~~~~~~~~~~--~~~~-------------------~~~~---~~~~~-------~~~~~v~~i~~spd~~~l~s~~~ 212 (621)
..|........+ +... ..++ ...+. .....+.-+.++|.+.+.+++..
T Consensus 431 -~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~he 509 (577)
T KOG0642|consen 431 -CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHE 509 (577)
T ss_pred -cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEeccc
Confidence 222111100000 0000 0000 00111 11245677889999999999999
Q ss_pred CCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeec
Q psy15549 213 DNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 213 dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
|+.|+++|..++..+.....|...++++++.|+|.+|++++.|+.+++|.+....++...
T Consensus 510 d~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es 569 (577)
T KOG0642|consen 510 DRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLES 569 (577)
T ss_pred CCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchheeecc
Confidence 999999999999999999999999999999999999999999999999999877665544
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-19 Score=165.73 Aligned_cols=306 Identities=17% Similarity=0.220 Sum_probs=206.3
Q ss_pred EEEEccCCCEEEEEc-CCc---eEEEEeccCccccccceecccccccC----CCeEEEEECC-------CCCEEEEEeCC
Q psy15549 86 VVRFSPNGELLASGD-DVG---KEIWYLTERESGIANVEFASDLSRHQ----KAVNVVRFSP-------NGELLASGDDE 150 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~---v~iw~~~~~~~~~~~~~~~~~~~~h~----~~V~~i~~sp-------~g~~l~s~s~d 150 (621)
.+..-|+..+|+++- +.. +.+|-.+.... ..+..|. ....|++|.. .|+|+|.|+.|
T Consensus 130 e~~V~psDnlIl~ar~eddvs~LEvYVyn~~e~--------nlYvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmd 201 (463)
T KOG0270|consen 130 EEQVKPSDNLILCARNEDDVSYLEVYVYNEEEE--------NLYVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMD 201 (463)
T ss_pred cceeccCCcEEEEeeccCCceEEEEEEEcCCCc--------ceeEecceeccCcchhhhhhhcCCCCCCCcceEEEeccC
Confidence 455667777777775 332 44554444321 1111222 2334666643 36799999999
Q ss_pred CcEEEEEccCCCCCCCC-CCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEE
Q psy15549 151 STIIVWKQKTDQDLPEF-PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHKGKNLG 228 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~~~ 228 (621)
..|.|||+.-...+... .-+.... ......-.-...-.+|...|.+++|+.. .+.||+|+.|.+|++||+.++++..
T Consensus 202 p~IeIWDLDI~d~v~P~~~LGs~~s-k~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~ 280 (463)
T KOG0270|consen 202 PEIEIWDLDIVDAVLPCVTLGSKAS-KKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKS 280 (463)
T ss_pred ceeEEeccccccccccceeechhhh-hhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcce
Confidence 99999998754433211 0000000 0000000001123478889999999874 4689999999999999999999999
Q ss_pred EeccCCcceEEEEEcCC-CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 229 ILTEHKKFVQGVAWDPK-NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 229 ~~~~~~~~v~~l~~sp~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
++..|.+.|.++.|+|. ..+|++|+.|++|.+.|.+.-...... -...+.|-.++|
T Consensus 281 s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~-----------------------wk~~g~VEkv~w 337 (463)
T KOG0270|consen 281 SITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKE-----------------------WKFDGEVEKVAW 337 (463)
T ss_pred ehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCce-----------------------EEeccceEEEEe
Confidence 99999999999999995 578999999999999999852211100 022445788999
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
.|.....+.++. .||+++-++++. ...++..+..|...+.++.+++.. -++++++
T Consensus 338 ~~~se~~f~~~t----ddG~v~~~D~R~------~~~~vwt~~AHd~~ISgl~~n~~~---------------p~~l~t~ 392 (463)
T KOG0270|consen 338 DPHSENSFFVST----DDGTVYYFDIRN------PGKPVWTLKAHDDEISGLSVNIQT---------------PGLLSTA 392 (463)
T ss_pred cCCCceeEEEec----CCceEEeeecCC------CCCceeEEEeccCCcceEEecCCC---------------Ccceeec
Confidence 998765444432 789988888763 347788888999999998877632 2778899
Q ss_pred EcCCcEEEEeCCCCceeEEEec-ccccceEEEEEcCCCC-eEEEEeCCCcEEEEEecCCcCCc
Q psy15549 388 ATENNILLYDTQHASPFAFIAN-IHYTKLTDITWSSDGK-VLIASSTDGYCSIISFGDNEIGI 448 (621)
Q Consensus 388 ~~dg~i~iwd~~~~~~~~~~~~-~h~~~v~~~~~spdg~-~l~s~s~dg~i~iw~~~~~~~~~ 448 (621)
+.++.+.+|++....+...... ..-+...|+++.|+-. +||.|+..+.++|||+.+....+
T Consensus 393 s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 393 STDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred cccceEEEEeecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence 9999999999887655333211 1123466777777754 67788888899999998776443
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.4e-19 Score=161.83 Aligned_cols=308 Identities=15% Similarity=0.170 Sum_probs=205.3
Q ss_pred cccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccc-cccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 75 SDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDL-SRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
..+.+|.+.|+++.||.++++|++|+ |..+++|.+...-... ..+++... ..|...|.|++|.....++++|+.+++
T Consensus 50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k-~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~ 128 (609)
T KOG4227|consen 50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRK-TPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGT 128 (609)
T ss_pred hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhc-CCCCceeccCccccceEEEEEccCCeeEecCCCcce
Confidence 45789999999999999999999998 6779999987532110 01222222 236689999999998899999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EE--EE
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK-NL--GI 229 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~-~~--~~ 229 (621)
|.+.|+.+.+.+..+ ......+.|+.+..+|..+.|++.+.++.|.+||++... .+ ..
T Consensus 129 VI~HDiEt~qsi~V~-------------------~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~ 189 (609)
T KOG4227|consen 129 VIKHDIETKQSIYVA-------------------NENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVL 189 (609)
T ss_pred eEeeecccceeeeee-------------------cccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceee
Confidence 999999998865332 122344589999999998999999999999999998754 22 22
Q ss_pred eccCCcceEEEEEcCCC-CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeec
Q psy15549 230 LTEHKKFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 308 (621)
+.........+.|+|.. .+|++.+..+-+.+||.+............... ..-.....++.|+
T Consensus 190 ~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L----------------~~~~~~~M~~~~~ 253 (609)
T KOG4227|consen 190 PANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGL----------------PQENTEWMGSLWS 253 (609)
T ss_pred ecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccC----------------cccchhhhheeeC
Confidence 23345567889999965 567788888899999998644211111000000 0001123578999
Q ss_pred CCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE
Q psy15549 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA 388 (621)
Q Consensus 309 pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (621)
|.|+.+++.- ....-..+++.. ....+.....+|..|--. -....+.+.++..+++|+
T Consensus 254 ~~G~Q~msiR-----R~~~P~~~D~~S----------------~R~~V~k~D~N~~GY~N~-~T~KS~~F~~D~~v~tGS 311 (609)
T KOG4227|consen 254 PSGNQFMSIR-----RGKCPLYFDFIS----------------QRCFVLKSDHNPNGYCNI-KTIKSMTFIDDYTVATGS 311 (609)
T ss_pred CCCCeehhhh-----ccCCCEEeeeec----------------ccceeEeccCCCCcceee-eeeeeeeeecceeeeccC
Confidence 9999888754 222222333321 011111111111000000 001223334556688888
Q ss_pred cCCcEEEEeCCCC-----------------------ceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 389 TENNILLYDTQHA-----------------------SPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 389 ~dg~i~iwd~~~~-----------------------~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
.+-.|++|.+... +.+ .+..+|..-+..+.|+|-..+|++.+-...++||.-
T Consensus 312 D~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~-~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 312 DHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKEL-TVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred cccceEEEecCCCccccCccccCcchhhCchhheeccee-EEEecccccccceeecCCcceEeccchhhheecccc
Confidence 8999999986431 112 223589999999999999999999999999999974
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.3e-18 Score=153.14 Aligned_cols=241 Identities=17% Similarity=0.212 Sum_probs=180.1
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
...+..+.|+.|.. .|..|+.||.- ++......... ........|.-+-||.
T Consensus 5 ~~ti~~~~~Nqd~~-----~lsvGs~~Gyk---------------~~~~~~~~k~~-------~~~~~~~~IvEmLFSS- 56 (391)
T KOG2110|consen 5 KPTINFIGFNQDST-----LLSVGSKDGYK---------------IFSCSPFEKCF-------SKDTEGVSIVEMLFSS- 56 (391)
T ss_pred Ccceeeeeecccee-----EEEccCCCcee---------------EEecCchHHhh-------cccCCCeEEEEeeccc-
Confidence 34577777999997 99999999976 66655433211 1111223455555664
Q ss_pred CCEEEEEc-CC--ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 93 GELLASGD-DV--GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 93 g~~las~~-d~--~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
.++|..+ +. .++++++... ..+..+ .....|.++.++. +.|+++-.+. |.|||+.+.+.+.++
T Consensus 57 -SLvaiV~~~qpr~Lkv~~~Kk~-------~~ICe~-~fpt~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklLhTI-- 122 (391)
T KOG2110|consen 57 -SLVAIVSIKQPRKLKVVHFKKK-------TTICEI-FFPTSILAVRMNR--KRLVVCLEES-IYIYDIKDMKLLHTI-- 122 (391)
T ss_pred -ceeEEEecCCCceEEEEEcccC-------ceEEEE-ecCCceEEEEEcc--ceEEEEEccc-EEEEecccceeehhh--
Confidence 4555544 33 3678877765 222222 1345788888864 4677776654 999999999987665
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe--CCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS--VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~ 247 (621)
.....+...+.++.+++.+.+|+.-+ ..|.|.+||+.+-+.+..+..|.+.+.+++|+++|.
T Consensus 123 ----------------~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~ 186 (391)
T KOG2110|consen 123 ----------------ETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGT 186 (391)
T ss_pred ----------------hccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCC
Confidence 33445777788888888888888633 368999999999999999999999999999999999
Q ss_pred EEEEEeCCCc-EEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCC
Q psy15549 248 YVATLSSDRS-LRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDS 326 (621)
Q Consensus 248 ~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~ 326 (621)
+||+++..|+ ||+|.+.+|+.+.++..... ...|.+++|+||+.+|++.+ ..+
T Consensus 187 llATASeKGTVIRVf~v~~G~kl~eFRRG~~---------------------~~~IySL~Fs~ds~~L~~sS-----~Te 240 (391)
T KOG2110|consen 187 LLATASEKGTVIRVFSVPEGQKLYEFRRGTY---------------------PVSIYSLSFSPDSQFLAASS-----NTE 240 (391)
T ss_pred EEEEeccCceEEEEEEcCCccEeeeeeCCce---------------------eeEEEEEEECCCCCeEEEec-----CCC
Confidence 9999999997 89999999999998875443 33579999999999999999 889
Q ss_pred CCcceeeeeee
Q psy15549 327 TRKPISVTHVF 337 (621)
Q Consensus 327 ~i~~~~~~~~~ 337 (621)
++.++.+....
T Consensus 241 TVHiFKL~~~~ 251 (391)
T KOG2110|consen 241 TVHIFKLEKVS 251 (391)
T ss_pred eEEEEEecccc
Confidence 99999887554
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-19 Score=159.99 Aligned_cols=197 Identities=16% Similarity=0.307 Sum_probs=151.3
Q ss_pred eEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc--CCCEEEEEc-CCceEEE
Q psy15549 31 YRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--NGELLASGD-DVGKEIW 107 (621)
Q Consensus 31 ~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp--dg~~las~~-d~~v~iw 107 (621)
+.+|++.+.|.|+ +||..++.... .++++...++.+.|.. ....+.+|+ ||.|++|
T Consensus 41 ~~vav~lSngsv~--------------lyd~~tg~~l~-------~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~w 99 (376)
T KOG1188|consen 41 TAVAVSLSNGSVR--------------LYDKGTGQLLE-------EFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLW 99 (376)
T ss_pred eeEEEEecCCeEE--------------EEeccchhhhh-------eecCCCCcccceEEecCCCCCeeEEeccCCeEEEE
Confidence 4799999999999 88888766544 4899999999999987 456677766 9999999
Q ss_pred EeccCccccccceecccccccC-CCeEEEEECCCCCEEEEEe----CCCcEEEEEccCCCCCCCCCCCCcccccccccce
Q psy15549 108 YLTERESGIANVEFASDLSRHQ-KAVNVVRFSPNGELLASGD----DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHW 182 (621)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~h~-~~V~~i~~sp~g~~l~s~s----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (621)
|++.... ........+. .+..+++....++.+++|. .+-.|.+||++..+..
T Consensus 100 D~Rs~~e-----~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~------------------ 156 (376)
T KOG1188|consen 100 DIRSQAE-----SARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQL------------------ 156 (376)
T ss_pred Eeecchh-----hhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccch------------------
Confidence 9998643 2233344454 4666777777788888875 4668999999988762
Q ss_pred eeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcE---EEEeccCCcceEEEEEcCCC-CEEEEEeCCCc
Q psy15549 183 IVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKN---LGILTEHKKFVQGVAWDPKN-QYVATLSSDRS 257 (621)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~~v~~l~~sp~~-~~l~s~~~dg~ 257 (621)
+......|...|+++.|+| +.++|++|+.||.|.|||+..... +...-.|...|.++.|..++ +.|.+.+...+
T Consensus 157 -l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Et 235 (376)
T KOG1188|consen 157 -LRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMET 235 (376)
T ss_pred -hhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCc
Confidence 1133568999999999999 568999999999999999965422 22223477789999999877 45888899999
Q ss_pred EEEEEccCceeeeec
Q psy15549 258 LRTYSIQSKKVISRA 272 (621)
Q Consensus 258 i~iwd~~~~~~~~~~ 272 (621)
..+|++..+.....+
T Consensus 236 f~~~ele~~~~~~~~ 250 (376)
T KOG1188|consen 236 FAIYELEDGSEETWL 250 (376)
T ss_pred eeEEEccCCChhhcc
Confidence 999999887744333
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-18 Score=158.44 Aligned_cols=218 Identities=19% Similarity=0.322 Sum_probs=167.6
Q ss_pred cccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEE
Q psy15549 122 ASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISW 200 (621)
Q Consensus 122 ~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 200 (621)
.-.+.+|+++|..++|+| +...||+||+|.+|.||.+..+.....+. +....+.+|...|--++|
T Consensus 74 ~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~lt--------------epvv~L~gH~rrVg~V~w 139 (472)
T KOG0303|consen 74 YPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLT--------------EPVVELYGHQRRVGLVQW 139 (472)
T ss_pred CCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcc--------------cceEEEeecceeEEEEee
Confidence 345679999999999999 66799999999999999998876654432 245788999999999999
Q ss_pred CCCC-CEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCC
Q psy15549 201 SPTS-THLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPV 279 (621)
Q Consensus 201 spd~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 279 (621)
+|.. +.|++++.|.+|.+||+.+|+.+.++. |...|.++.|+-||.+|++.+.|..|||||.++++.+..-..|...
T Consensus 140 HPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~- 217 (472)
T KOG0303|consen 140 HPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGA- 217 (472)
T ss_pred cccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCC-
Confidence 9954 789999999999999999999998887 9999999999999999999999999999999999988765433211
Q ss_pred CCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeee
Q psy15549 280 DSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAV 359 (621)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (621)
.-..+.|-.+|..+.++. .+
T Consensus 218 ---------------------k~~Raifl~~g~i~tTGf--sr------------------------------------- 237 (472)
T KOG0303|consen 218 ---------------------KPARAIFLASGKIFTTGF--SR------------------------------------- 237 (472)
T ss_pred ---------------------CcceeEEeccCceeeecc--cc-------------------------------------
Confidence 124566777777333322 11
Q ss_pred eccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc---eeEEEecccccceEEEEEcCCCCeEEEEe-CCCc
Q psy15549 360 KCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS---PFAFIANIHYTKLTDITWSSDGKVLIASS-TDGY 435 (621)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~h~~~v~~~~~spdg~~l~s~s-~dg~ 435 (621)
-++..+-+||...-+ .+..+. .++.|.---|.+|.+.+..++ .|+.
T Consensus 238 ----------------------------~seRq~aLwdp~nl~eP~~~~elD--tSnGvl~PFyD~dt~ivYl~GKGD~~ 287 (472)
T KOG0303|consen 238 ----------------------------MSERQIALWDPNNLEEPIALQELD--TSNGVLLPFYDPDTSIVYLCGKGDSS 287 (472)
T ss_pred ----------------------------ccccceeccCcccccCcceeEEec--cCCceEEeeecCCCCEEEEEecCCcc
Confidence 134566667654432 222222 344566666888888777655 7999
Q ss_pred EEEEEecCCc
Q psy15549 436 CSIISFGDNE 445 (621)
Q Consensus 436 i~iw~~~~~~ 445 (621)
||.|.+.+..
T Consensus 288 IRYyEit~d~ 297 (472)
T KOG0303|consen 288 IRYFEITNEP 297 (472)
T ss_pred eEEEEecCCC
Confidence 9999998765
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-17 Score=163.21 Aligned_cols=280 Identities=14% Similarity=0.208 Sum_probs=176.0
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc--CCceEEEEe
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD--DVGKEIWYL 109 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~--d~~v~iw~~ 109 (621)
.+++...++.|. +|++.+... +.....+. +.+....++++|++++|++++ ++.|.+|++
T Consensus 4 ~y~~~~~~~~I~--------------~~~~~~~g~----l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~ 64 (330)
T PRK11028 4 VYIASPESQQIH--------------VWNLNHEGA----LTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRI 64 (330)
T ss_pred EEEEcCCCCCEE--------------EEEECCCCc----eeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEE
Confidence 444556789999 888853221 11222332 335677899999999987765 778999999
Q ss_pred ccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeee
Q psy15549 110 TERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL 188 (621)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (621)
...+ .+....... ..+....++|+|++++|++++ .++.|.+|++.+...+... ....
T Consensus 65 ~~~g----~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~-----------------~~~~ 122 (330)
T PRK11028 65 ADDG----ALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAP-----------------IQII 122 (330)
T ss_pred CCCC----ceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCc-----------------eeec
Confidence 7321 112222211 223567899999999888876 4789999999754322110 0111
Q ss_pred cCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCcEEE-------EeccCCcceEEEEEcCCCCEEEEEeC-CCcEE
Q psy15549 189 RGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGKNLG-------ILTEHKKFVQGVAWDPKNQYVATLSS-DRSLR 259 (621)
Q Consensus 189 ~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~~~~~~-------~~~~~~~~v~~l~~sp~~~~l~s~~~-dg~i~ 259 (621)
.+.....+++++|+++++++++ .++.|.+||+.+...+. ... .......++|+|+|++|+++.. ++.|.
T Consensus 123 -~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~ 200 (330)
T PRK11028 123 -EGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVD 200 (330)
T ss_pred -cCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEE
Confidence 2234467889999999886655 46999999997643221 111 2334678999999999988876 89999
Q ss_pred EEEccC--cee--eeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeee
Q psy15549 260 TYSIQS--KKV--ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTH 335 (621)
Q Consensus 260 iwd~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~ 335 (621)
+|++.. ++. +..+... +. ..........+.++|+|++++++..
T Consensus 201 v~~~~~~~~~~~~~~~~~~~--p~---------------~~~~~~~~~~i~~~pdg~~lyv~~~---------------- 247 (330)
T PRK11028 201 VWQLKDPHGEIECVQTLDMM--PA---------------DFSDTRWAADIHITPDGRHLYACDR---------------- 247 (330)
T ss_pred EEEEeCCCCCEEEEEEEecC--CC---------------cCCCCccceeEEECCCCCEEEEecC----------------
Confidence 999973 222 2222110 00 0000112245788888888877541
Q ss_pred eeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc----eeEEEeccc
Q psy15549 336 VFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS----PFAFIANIH 411 (621)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~h 411 (621)
.++.|.+|++.... .+..+..+
T Consensus 248 -----------------------------------------------------~~~~I~v~~i~~~~~~~~~~~~~~~~- 273 (330)
T PRK11028 248 -----------------------------------------------------TASLISVFSVSEDGSVLSFEGHQPTE- 273 (330)
T ss_pred -----------------------------------------------------CCCeEEEEEEeCCCCeEEEeEEEecc-
Confidence 24566677664332 12222111
Q ss_pred ccceEEEEEcCCCCeEEEEeC-CCcEEEEEec
Q psy15549 412 YTKLTDITWSSDGKVLIASST-DGYCSIISFG 442 (621)
Q Consensus 412 ~~~v~~~~~spdg~~l~s~s~-dg~i~iw~~~ 442 (621)
.....++|+|||++|++++. +++|.+|+++
T Consensus 274 -~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 274 -TQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred -ccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 24567899999999998775 8999999986
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-17 Score=167.33 Aligned_cols=419 Identities=16% Similarity=0.145 Sum_probs=268.9
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCcccccc----ceeEEecc--------------------
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKT----GKIWYLTE-------------------- 63 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~----~~iw~~~~-------------------- 63 (621)
.+..|..+++.+.+.|... +..++++++.+|.|++||...+..+++ ..+..+..
T Consensus 52 ~l~~~~a~l~s~~~~~~~~--~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~ 129 (792)
T KOG1963|consen 52 SLEDHTAPLTSVIVLPSSE--NANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSI 129 (792)
T ss_pred hcccccCccceeeecCCCc--cceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeeccccee
Confidence 5667889999999998875 245788999999999999876544421 00111100
Q ss_pred -----cccccc-ceeeccc--------cccccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccC
Q psy15549 64 -----RESGIA-NVEFASD--------LSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQ 129 (621)
Q Consensus 64 -----~~~~~~-~~~~~~~--------~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~ 129 (621)
.+...+ ..-.+.+ +.+|.. -.++.+++.|.+.+..-+..+.+|....+.. .......-..|.
T Consensus 130 ~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~-~~~I~~~~~ge~~~i~~~~~~~~~~v~~~~~---~~~~~~~~~~Ht 205 (792)
T KOG1963|consen 130 LTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQE-PKSIVDNNSGEFKGIVHMCKIHIYFVPKHTK---HTSSRDITVHHT 205 (792)
T ss_pred eeecccccccceeeeEeeeccccchhhhhhhcC-CccEEEcCCceEEEEEEeeeEEEEEecccce---eeccchhhhhhc
Confidence 000000 0000001 111211 3567788888888888888999999987541 112222334577
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEccCC-CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE
Q psy15549 130 KAVNVVRFSPNGELLASGDDESTIIVWKQKTD-QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 130 ~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~ 208 (621)
..+++.+++|+++++|++..||.|.+|.--.. .... ....+.-|...|.+++|+++|.+|+
T Consensus 206 f~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~------------------t~t~lHWH~~~V~~L~fS~~G~~Ll 267 (792)
T KOG1963|consen 206 FNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSE------------------TCTLLHWHHDEVNSLSFSSDGAYLL 267 (792)
T ss_pred ccceeEEeccccceEEEeccCCcEEEEeccccccccc------------------cceEEEecccccceeEEecCCceEe
Confidence 78999999999999999999999999964331 1111 1266778999999999999999999
Q ss_pred EEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccc
Q psy15549 209 SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDK 288 (621)
Q Consensus 209 s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (621)
+|+..|.+.+|.+.+++ .+-+..-.++|..+.++||+.+.+....|+.|.+....+......+.+...+....
T Consensus 268 SGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~------ 340 (792)
T KOG1963|consen 268 SGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPST------ 340 (792)
T ss_pred ecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccc------
Confidence 99999999999999988 34445567899999999999999999999999999887776655554333221110
Q ss_pred cccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecC----Ccccceeeeeccce
Q psy15549 289 VVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLP----SLQYYSVAVKCCPV 364 (621)
Q Consensus 289 ~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 364 (621)
.....+..+.++++|.-+.++..+ ..+.+++|++................. .+...+..+.
T Consensus 341 ------k~~~~~l~t~~~idpr~~~~vln~-----~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~---- 405 (792)
T KOG1963|consen 341 ------KTRPQSLTTGVSIDPRTNSLVLNG-----HPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVA---- 405 (792)
T ss_pred ------cccccccceeEEEcCCCCceeecC-----CCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeeh----
Confidence 111234457788999666666665 678888888654322211100000000 0111111111
Q ss_pred eeecCCCCCCCCccCCCcEEEEEE--------cCC--cEEEEeCCCCc----eeEEEecccccceEEEEEcCC-CC-eEE
Q psy15549 365 LFELKPSDDKPLFKLPYRIVIAVA--------TEN--NILLYDTQHAS----PFAFIANIHYTKLTDITWSSD-GK-VLI 428 (621)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~l~~~~--------~dg--~i~iwd~~~~~----~~~~~~~~h~~~v~~~~~spd-g~-~l~ 428 (621)
.+..+.++++.- .|| .+++|...... ....+...|...+...++.+. .. .++
T Consensus 406 ------------~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~v 473 (792)
T KOG1963|consen 406 ------------RSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCV 473 (792)
T ss_pred ------------hhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeE
Confidence 112344555443 222 67889765543 334444578877766666543 22 799
Q ss_pred EEeCCCcEEEEEecCCcCCcc----------cCCCCCcccccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 429 ASSTDGYCSIISFGDNEIGIP----------YVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 429 s~s~dg~i~iw~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
+++.||.++||-+.+.+-... -.-+..++....|+.||.. ...+.++.+.+|+...
T Consensus 474 ta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGsl-la~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 474 TASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSL-LAVSFDDTITIWDYDT 539 (792)
T ss_pred EeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcE-EEEecCCEEEEecCCC
Confidence 999999999999953322111 1114567788899999954 4566777888888554
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.4e-19 Score=156.02 Aligned_cols=249 Identities=19% Similarity=0.327 Sum_probs=180.8
Q ss_pred eeecCCCCeEEEeccccccCC--cceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccC---
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKD--NCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK--- 82 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~--~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~--- 82 (621)
+.....+.|+..+|-+--+.+ ..+++|+.+.+.-|. +||..+++.... ...-.|.+
T Consensus 99 ~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh--------------~wdaftG~lraS-----y~~ydh~de~t 159 (406)
T KOG2919|consen 99 YRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIH--------------LWDAFTGKLRAS-----YRAYDHQDEYT 159 (406)
T ss_pred EEeccCCEEEEEEeeeccccCCCccceeeeccccCcee--------------eeeccccccccc-----hhhhhhHHhhh
Confidence 344445567777776321111 123889999999999 999888865432 11122333
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceeccc-ccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccC
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASD-LSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~ 160 (621)
.-.+++|+|||..|.+|....|+++++...+.....+..... -.+..+.|.+++|+| +.+.++.|+....+-||.-..
T Consensus 160 aAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~ 239 (406)
T KOG2919|consen 160 AAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDG 239 (406)
T ss_pred hheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCC
Confidence 346899999999999999999999999665543322222211 223467899999999 566999999988999998777
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCC-CcEEEEeccCCc-ce
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHK-GKNLGILTEHKK-FV 237 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~-~~~~~~~~~~~~-~v 237 (621)
+.++ ..+.+|.+.|+.+.|.++|+.|++|.. |-.|..||++. +.++..+..|.. .-
T Consensus 240 ~~pl---------------------~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TN 298 (406)
T KOG2919|consen 240 RRPL---------------------QLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTN 298 (406)
T ss_pred CCce---------------------eeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCcc
Confidence 7764 667799999999999999999999987 67899999986 456666666655 33
Q ss_pred EEEEE--cCCCCEEEEEeCCCcEEEEEccC-ceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeE
Q psy15549 238 QGVAW--DPKNQYVATLSSDRSLRTYSIQS-KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL 314 (621)
Q Consensus 238 ~~l~~--sp~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l 314 (621)
..|.| .|++++|++|+.||.|++||+.+ +..+..+ ..+...++.++++|--..+
T Consensus 299 QRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~-----------------------~~~sd~vNgvslnP~mpil 355 (406)
T KOG2919|consen 299 QRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVT-----------------------GNYSDTVNGVSLNPIMPIL 355 (406)
T ss_pred ceEEEecCCCCceeeccCCCccEEEEecCCCCCccccc-----------------------ccccccccceecCccccee
Confidence 34444 68999999999999999999987 4423222 2334456889999998888
Q ss_pred Eeccc
Q psy15549 315 IAPSG 319 (621)
Q Consensus 315 ~~~s~ 319 (621)
++++|
T Consensus 356 atssG 360 (406)
T KOG2919|consen 356 ATSSG 360 (406)
T ss_pred eeccC
Confidence 88874
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-20 Score=184.05 Aligned_cols=289 Identities=17% Similarity=0.240 Sum_probs=224.1
Q ss_pred cccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCe
Q psy15549 116 IANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDV 195 (621)
Q Consensus 116 ~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 195 (621)
....+.+..+.+|...|.|+.|...|.++++|+.|..++||.+++..++ ....||.+.|
T Consensus 177 vqkmk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~l---------------------As~rGhs~di 235 (1113)
T KOG0644|consen 177 VQKMKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCL---------------------ASCRGHSGDI 235 (1113)
T ss_pred HHHHHHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhh---------------------ccCCCCcccc
Confidence 3344667788999999999999999999999999999999999999876 5568999999
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccC
Q psy15549 196 YDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRS 275 (621)
Q Consensus 196 ~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 275 (621)
+.++.+.++.++++++.|..|++|-+.++.++..+.+|.+.|++++|+|-. +.+.||++++||.+-. .. ....
T Consensus 236 tdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~-~~--~y~p 308 (1113)
T KOG0644|consen 236 TDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLE-PR--IYVP 308 (1113)
T ss_pred chhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEecccccc-cc--ccCC
Confidence 999999999999999999999999999999999999999999999999954 6788999999999811 11 1000
Q ss_pred CCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccc
Q psy15549 276 KLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYY 355 (621)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (621)
.|. ....+..+.++.|...+..+++++ .|+....|.+.... .+...
T Consensus 309 -rp~---------------~~~~~~~~~s~~~~~~~~~f~Tgs-----~d~ea~n~e~~~l~-------------~~~~~ 354 (1113)
T KOG0644|consen 309 -RPL---------------KFTEKDLVDSILFENNGDRFLTGS-----RDGEARNHEFEQLA-------------WRSNL 354 (1113)
T ss_pred -CCC---------------Ccccccceeeeecccccccccccc-----CCcccccchhhHhh-------------hhccc
Confidence 000 011123456778888888888888 77777777654211 11110
Q ss_pred eeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEEeCCC
Q psy15549 356 SVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIASSTDG 434 (621)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~s~dg 434 (621)
..-+.++. -.+...+++-.+..+.+|++.+|...+.+ .+|...+..+.++|-.. ...+++.||
T Consensus 355 lif~t~ss---------------d~~~~~~~ar~~~~~~vwnl~~g~l~H~l-~ghsd~~yvLd~Hpfn~ri~msag~dg 418 (1113)
T KOG0644|consen 355 LIFVTRSS---------------DLSSIVVTARNDHRLCVWNLYTGQLLHNL-MGHSDEVYVLDVHPFNPRIAMSAGYDG 418 (1113)
T ss_pred eEEEeccc---------------cccccceeeeeeeEeeeeecccchhhhhh-cccccceeeeeecCCCcHhhhhccCCC
Confidence 00000000 01134566667788999999999888877 57999999999999655 455889999
Q ss_pred cEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhc
Q psy15549 435 YCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 435 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~ 482 (621)
...|||+-.|..++......+....-.|+++|..++..+..|++++..
T Consensus 419 st~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g 466 (1113)
T KOG0644|consen 419 STIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILG 466 (1113)
T ss_pred ceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEec
Confidence 999999999988887776666777779999999999999999988876
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.5e-20 Score=188.02 Aligned_cols=256 Identities=18% Similarity=0.299 Sum_probs=196.3
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
.....+.++|.+.+.+.. -+||.|..||.|. +||...-. .....+.+.+...|.+.|..+.|++
T Consensus 63 s~~rF~kL~W~~~g~~~~-GlIaGG~edG~I~--------------ly~p~~~~-~~~~~~~la~~~~h~G~V~gLDfN~ 126 (1049)
T KOG0307|consen 63 SSNRFNKLAWGSYGSHSH-GLIAGGLEDGNIV--------------LYDPASII-ANASEEVLATKSKHTGPVLGLDFNP 126 (1049)
T ss_pred ccccceeeeecccCCCcc-ceeeccccCCceE--------------Eecchhhc-cCcchHHHhhhcccCCceeeeeccc
Confidence 345688999999887111 2589999999999 88876531 1123455778899999999999999
Q ss_pred CC-CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 92 NG-ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 92 dg-~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
.. ++||+|+ ++.|.|||+...+..... .-......|.+++|+.. ...|++++.+|.+.|||++..+.+-.+.
T Consensus 127 ~q~nlLASGa~~geI~iWDlnn~~tP~~~-----~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls 201 (1049)
T KOG0307|consen 127 FQGNLLASGADDGEILIWDLNKPETPFTP-----GSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLS 201 (1049)
T ss_pred cCCceeeccCCCCcEEEeccCCcCCCCCC-----CCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccc
Confidence 65 4999988 888999999975421110 01224578999999874 4588899999999999999997764331
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCC---CeEEEEECCCC-cEEEEeccCCcceEEEEEc
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVD---NTAIMWDVHKG-KNLGILTEHKKFVQGVAWD 243 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~d---g~i~vwd~~~~-~~~~~~~~~~~~v~~l~~s 243 (621)
..+....+..++|+|+. ..|++++.| -.|.+||++.- .+++.+++|...|.++.|+
T Consensus 202 -------------------~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc 262 (1049)
T KOG0307|consen 202 -------------------DTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWC 262 (1049)
T ss_pred -------------------cCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccC
Confidence 12223458899999976 567777665 47999999863 4677788999999999999
Q ss_pred CCC-CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC-eEEeccccc
Q psy15549 244 PKN-QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ-LLIAPSGCL 321 (621)
Q Consensus 244 p~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~-~l~~~s~~~ 321 (621)
+.+ .+|++++.|+.|.+|+..+++.+..+.. ...++..+.|+|... .+++++
T Consensus 263 ~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~-----------------------~~nW~fdv~w~pr~P~~~A~as--- 316 (1049)
T KOG0307|consen 263 PQDPRLLLSSGKDNRIICWNPNTGEVLGELPA-----------------------QGNWCFDVQWCPRNPSVMAAAS--- 316 (1049)
T ss_pred CCCchhhhcccCCCCeeEecCCCceEeeecCC-----------------------CCcceeeeeecCCCcchhhhhe---
Confidence 966 8899999999999999999999887753 234678899999887 666666
Q ss_pred cCCCCCCcceeeee
Q psy15549 322 ENSDSTRKPISVTH 335 (621)
Q Consensus 322 ~~~d~~i~~~~~~~ 335 (621)
.+|.|.|+.+..
T Consensus 317 --fdgkI~I~sl~~ 328 (1049)
T KOG0307|consen 317 --FDGKISIYSLQG 328 (1049)
T ss_pred --eccceeeeeeec
Confidence 899999998764
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=163.95 Aligned_cols=231 Identities=16% Similarity=0.237 Sum_probs=159.8
Q ss_pred cCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEc
Q psy15549 11 HNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 90 (621)
Q Consensus 11 ~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 90 (621)
.|...|.|+.|+.+.. .+.+++.+..+. -|++.+...... ++...+..-...+....--
T Consensus 12 r~~e~vc~v~w~~~ee-----i~~~~dDh~~~~--------------~~~~~~~s~~~~--~~p~df~pt~~h~~~rs~~ 70 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEE-----IYFVSDDHQIFK--------------WSDVSRDSVEVA--KLPDDFVPTDMHLGGRSSG 70 (737)
T ss_pred ccceeEEeecccccce-----EEEeccCceEEE--------------eecccchhhhhh--hCCcccCCccccccccccC
Confidence 4667889999999886 666666555554 445443322111 0000010000000000000
Q ss_pred ---cCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 91 ---PNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 91 ---pdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
....++++.+|+.+.|.+-.. .....+..|.+.|.+-.|+|+|.-|+++++||.|++|.-...-
T Consensus 71 ~g~~~d~~~i~s~DGkf~il~k~~--------rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGML----- 137 (737)
T KOG1524|consen 71 GGKGSDTLLICSNDGRFVILNKSA--------RVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGML----- 137 (737)
T ss_pred CCCCcceEEEEcCCceEEEecccc--------hhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchH-----
Confidence 012355566688887776543 4456778899999999999999999999999999999844332
Q ss_pred CCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC
Q psy15549 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247 (621)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~ 247 (621)
...+.....+|+|++|.|+.+.++.+. .+.+.|=.+.-...+-..++|.+-|.++.|++..+
T Consensus 138 -----------------RStl~Q~~~~v~c~~W~p~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~ 199 (737)
T KOG1524|consen 138 -----------------RSTVVQNEESIRCARWAPNSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSN 199 (737)
T ss_pred -----------------HHHHhhcCceeEEEEECCCCCceEEec-CCeEEEeecccccceeEEeccCcEEEEeecCcccc
Confidence 133455678899999999887666554 46677877777777778899999999999999999
Q ss_pred EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
.+++|++|-..++||... .. +|....+..+|++++|.|+ +.+++++
T Consensus 200 lI~sgGED~kfKvWD~~G-~~-----------------------Lf~S~~~ey~ITSva~npd-~~~~v~S 245 (737)
T KOG1524|consen 200 IIASGGEDFRFKIWDAQG-AN-----------------------LFTSAAEEYAITSVAFNPE-KDYLLWS 245 (737)
T ss_pred ceeecCCceeEEeecccC-cc-----------------------cccCChhccceeeeeeccc-cceeeee
Confidence 999999999999999743 22 3344456778899999999 5555554
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.1e-19 Score=151.16 Aligned_cols=289 Identities=19% Similarity=0.242 Sum_probs=192.2
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccc-cccCcEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLS-RHQKAVNVV 87 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~l 87 (621)
+..|.+.|+|+.|..++ +|.+|..-|.|. +|++.+...... ++ .|...|+.+
T Consensus 10 LRp~~~~v~s~~fqa~~------rL~sg~~~G~V~--------------~w~lqt~r~~~~-------~r~~g~~~it~l 62 (323)
T KOG0322|consen 10 LRPHSSSVTSVLFQANE------RLMSGLSVGIVK--------------MWVLQTERDLPL-------IRLFGRLFITNL 62 (323)
T ss_pred eccccchheehhhccch------hhhcccccceEE--------------EEEeecCccchh-------hhhhccceeece
Confidence 44688899999999988 799999999999 999987765443 55 567889999
Q ss_pred EEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECC-----CCC----EEEEEeCCC-cEEEEE
Q psy15549 88 RFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-----NGE----LLASGDDES-TIIVWK 157 (621)
Q Consensus 88 ~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-----~g~----~l~s~s~dg-~i~vwd 157 (621)
.--|++.++.-|-|..+.+|++.... . ..-|.-.++++-|.+ +++ .++.-++.. .+++-|
T Consensus 63 q~~p~d~l~tqgRd~~L~lw~ia~s~-------~---i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D 132 (323)
T KOG0322|consen 63 QSIPNDSLDTQGRDPLLILWTIAYSA-------F---ISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQD 132 (323)
T ss_pred eecCCcchhhcCCCceEEEEEccCcc-------e---EEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhc
Confidence 99998777766779999999998641 1 122334444555533 211 122111100 012222
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CC--CEEEEEeCCCeEEEEECCCCcEEE------
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TS--THLISGSVDNTAIMWDVHKGKNLG------ 228 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~--~~l~s~~~dg~i~vwd~~~~~~~~------ 228 (621)
......+... .....+..+.+.|..+.. ++ -+|++|.++|.+.+||+.++..+.
T Consensus 133 ~g~~tqv~i~-----------------dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~ 195 (323)
T KOG0322|consen 133 GGDTTQVQIA-----------------DDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSS 195 (323)
T ss_pred cCccceeEcc-----------------CchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeecccccc
Confidence 2111111000 011124456677777543 33 256678889999999999884443
Q ss_pred ----EeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceee
Q psy15549 229 ----ILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304 (621)
Q Consensus 229 ----~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 304 (621)
....|..+|.++.|.+.-..=++|+.+..+..|.+......-++.. .....+..+..
T Consensus 196 kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~-------------------e~~lknpGv~g 256 (323)
T KOG0322|consen 196 KVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRK-------------------EITLKNPGVSG 256 (323)
T ss_pred ccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccc-------------------eEEecCCCccc
Confidence 3346889999999987666666788888888998754311100000 00001223455
Q ss_pred eeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEE
Q psy15549 305 LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIV 384 (621)
Q Consensus 305 ~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 384 (621)
+.+-||++.+|++
T Consensus 257 vrIRpD~KIlATA------------------------------------------------------------------- 269 (323)
T KOG0322|consen 257 VRIRPDGKILATA------------------------------------------------------------------- 269 (323)
T ss_pred eEEccCCcEEeec-------------------------------------------------------------------
Confidence 5666666655554
Q ss_pred EEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 385 IAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 385 ~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
+.|++|++|+.++..++..+ ..|...|++++|+||...+|++|.|+.|.+|++
T Consensus 270 ---GWD~RiRVyswrtl~pLAVL-kyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 270 ---GWDHRIRVYSWRTLNPLAVL-KYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred ---ccCCcEEEEEeccCCchhhh-hhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 47889999999999999988 469999999999999999999999999999986
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-18 Score=154.19 Aligned_cols=358 Identities=14% Similarity=0.144 Sum_probs=230.8
Q ss_pred EEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEE
Q psy15549 18 SVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLA 97 (621)
Q Consensus 18 ~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~la 97 (621)
-++|||+|+ ++|+++.- .+. |-|..+-+.... + ..-+.|.-+.|..|.-+++
T Consensus 13 ~c~fSp~g~-----yiAs~~~y-rlv--------------iRd~~tlq~~ql-------f-~cldki~yieW~ads~~il 64 (447)
T KOG4497|consen 13 FCSFSPCGN-----YIASLSRY-RLV--------------IRDSETLQLHQL-------F-LCLDKIVYIEWKADSCHIL 64 (447)
T ss_pred ceeECCCCC-----eeeeeeee-EEE--------------EeccchhhHHHH-------H-HHHHHhhheeeeccceeee
Confidence 357999998 99999877 444 777665443221 2 1245788899999998888
Q ss_pred EEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCE-EEEEeCCCcEEEEEccCCCCCCCCCCCCccc
Q psy15549 98 SGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGEL-LASGDDESTIIVWKQKTDQDLPEFPSSNLDE 174 (621)
Q Consensus 98 s~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~-l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 174 (621)
++. +..|.+|++... .....+.....++.+++|||+|+. |.+...+-.|.||.+.+.+..
T Consensus 65 C~~yk~~~vqvwsl~Qp-------ew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~---------- 127 (447)
T KOG4497|consen 65 CVAYKDPKVQVWSLVQP-------EWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY---------- 127 (447)
T ss_pred eeeeccceEEEEEeecc-------eeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE----------
Confidence 876 778999999977 445556667788999999999965 455667889999999988742
Q ss_pred ccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEEC---CCCcEEEEeccCCcceEEEEEcCCCCEEEE
Q psy15549 175 ENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDV---HKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251 (621)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~---~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s 251 (621)
.+.-....+..++|+|||++.+.+++......+++ .....++.+....-..+.+.|+|||+.|++
T Consensus 128 ------------~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laV 195 (447)
T KOG4497|consen 128 ------------LLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAV 195 (447)
T ss_pred ------------EecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEE
Confidence 22333455789999999999998886432222222 122334455555666788999999999986
Q ss_pred EeC--CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCc
Q psy15549 252 LSS--DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRK 329 (621)
Q Consensus 252 ~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~ 329 (621)
-.. +-.|..|....| +..+.|+|.+++|++|+ .|+.++
T Consensus 196 wd~~Leykv~aYe~~lG-----------------------------------~k~v~wsP~~qflavGs-----yD~~lr 235 (447)
T KOG4497|consen 196 WDNVLEYKVYAYERGLG-----------------------------------LKFVEWSPCNQFLAVGS-----YDQMLR 235 (447)
T ss_pred ecchhhheeeeeeeccc-----------------------------------eeEEEeccccceEEeec-----cchhhh
Confidence 543 344445543332 36789999999999999 999998
Q ss_pred ceeeeeeeeecccC------CCce------ecCCcccceeeeeccc---------------------eeeec-C--CC--
Q psy15549 330 PISVTHVFTRACLN------KPAV------CLPSLQYYSVAVKCCP---------------------VLFEL-K--PS-- 371 (621)
Q Consensus 330 ~~~~~~~~~~~~~~------~~~~------~~~~~~~~~~~~~~~~---------------------~~~~~-~--~~-- 371 (621)
+.+.-.-....... .+.. ..........++.|.| ..+.. . .+
T Consensus 236 vlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~p 315 (447)
T KOG4497|consen 236 VLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFP 315 (447)
T ss_pred hhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCC
Confidence 86643322111111 0100 0000000011111211 11110 0 00
Q ss_pred ----CCCCCccCCCcEEEEEEcC---CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 372 ----DDKPLFKLPYRIVIAVATE---NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 372 ----~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
+...+..+.+...++.-+| +.+.+||+..-+....+. ...+|....|+|....|+.+.....+++|....
T Consensus 316 nPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi--Qk~piraf~WdP~~prL~vctg~srLY~W~psg- 392 (447)
T KOG4497|consen 316 NPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI--QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSG- 392 (447)
T ss_pred CcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh--hccceeEEEeCCCCceEEEEcCCceEEEEcCCC-
Confidence 1122223344555555554 479999999887666653 456899999999999999887777899998664
Q ss_pred cCCcccCCCCCcccccCCCCCCCCcccCCCc
Q psy15549 445 EIGIPYVPPSGEESKENDPTKGEPVRSEDKP 475 (621)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 475 (621)
-..-..+.+...+..+.+..+|+.++-.+.|
T Consensus 393 ~~~V~vP~~GF~i~~l~W~~~g~~i~l~~kD 423 (447)
T KOG4497|consen 393 PRVVGVPKKGFNIQKLQWLQPGEFIVLCGKD 423 (447)
T ss_pred ceEEecCCCCceeeeEEecCCCcEEEEEcCC
Confidence 3334445556777788888887765544433
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-16 Score=162.34 Aligned_cols=325 Identities=28% Similarity=0.457 Sum_probs=234.8
Q ss_pred CCeEEEec-cccccCCcceEEEEecC-CceEEeeeccCccccccceeEEecc-ccccccceeeccccccccCcEEEEEEc
Q psy15549 14 DPVLSVDI-QLKQEKDNCYRIVTGGA-DSHVFDYLLKIPHRLKTGKIWYLTE-RESGIANVEFASDLSRHQKAVNVVRFS 90 (621)
Q Consensus 14 ~~v~~l~~-spd~~~~~~~~l~tg~~-dg~v~~~d~~~~~~~~~~~iw~~~~-~~~~~~~~~~~~~~~~h~~~V~~l~~s 90 (621)
..+..+.+ ++++. .+++..+. |+.+. +|+... ... ...+..|...|.+++|+
T Consensus 110 ~~~~~~~~~~~~~~----~~~~~~~~~d~~~~--------------~~~~~~~~~~-------~~~~~~~~~~v~~~~~~ 164 (466)
T COG2319 110 SSVSKLALSSPDGN----SILLASSSLDGTVK--------------LWDLSTPGKL-------IRTLEGHSESVTSLAFS 164 (466)
T ss_pred CceeeEEEECCCcc----eEEeccCCCCccEE--------------EEEecCCCeE-------EEEEecCcccEEEEEEC
Confidence 36777777 66664 24444344 88898 888876 222 33478899999999999
Q ss_pred cCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCC-EEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 91 PNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE-LLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 91 pdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~-~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
|++.++++++ ++.+++|+.... .....+.+|...|.+++|+|++. ++++++.|+.|++||...+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~--- 234 (466)
T COG2319 165 PDGKLLASGSSLDGTIKLWDLRTG-------KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLL--- 234 (466)
T ss_pred CCCCEEEecCCCCCceEEEEcCCC-------ceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEE---
Confidence 9999888876 888999999874 55667777999999999999998 5556699999999987744432
Q ss_pred CCCCcccccccccceeeee-eecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-EEEeccCCcceEEEEEcCC
Q psy15549 168 PSSNLDEENVNKEHWIVTK-ILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN-LGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~l~~sp~ 245 (621)
. .+.+|.... ...|+|++.++++++.|+.+++|++..... +..+..|...+.++.|+|+
T Consensus 235 ------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 295 (466)
T COG2319 235 ------------------RSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPD 295 (466)
T ss_pred ------------------eeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCC
Confidence 3 466777775 448999998999999999999999987664 4444678899999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCC
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSD 325 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d 325 (621)
+..+++++.|+.+.+|+..+........ ...+...+..+.|.+++..++.+.. .|
T Consensus 296 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~d 350 (466)
T COG2319 296 GKLLASGSSDGTVRLWDLETGKLLSSLT---------------------LKGHEGPVSSLSFSPDGSLLVSGGS----DD 350 (466)
T ss_pred CCEEEEeeCCCcEEEEEcCCCceEEEee---------------------ecccCCceEEEEECCCCCEEEEeec----CC
Confidence 8888889999999999988776555442 0112224677888433345555521 55
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEE-EEEcCCcEEEEeCCCCcee
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVI-AVATENNILLYDTQHASPF 404 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~ 404 (621)
+.+.+|+...... ........ .+..+.+.+ . ..++ .+..++.+.+|+.......
T Consensus 351 ~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~----------------~-~~~~~~~~~~~~~~~~~~~~~~~~ 405 (466)
T COG2319 351 GTIRLWDLRTGKP-------LKTLEGHS-NVLSVSFSP----------------D-GRVVSSGSTDGTVRLWDLSTGSLL 405 (466)
T ss_pred CcEEeeecCCCce-------eEEecCCc-eEEEEEECC----------------C-CCEEEEecCCCceEEEecccCeee
Confidence 6677776653320 00000010 022333222 1 1223 3678899999999998877
Q ss_pred EEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 405 AFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 405 ~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
......+ ..+....+++++..+++++.++.+++|+..+
T Consensus 406 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 406 RNLDGHT-SRVTSLDFSPDGKSLASGSSDNTIRLWDLKT 443 (466)
T ss_pred eeccCCC-CcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence 7664322 7899999999999999999999999999987
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.9e-17 Score=139.43 Aligned_cols=245 Identities=15% Similarity=0.231 Sum_probs=173.7
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccc---ccceeeccccccccCcEEEEEEcc
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESG---IANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~---~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
.|.+-+++|-++ +|++|..+|.|. +..+...... ...-......++|.++|+.++|.
T Consensus 12 tvf~qa~sp~~~-----~l~agn~~G~ia--------------v~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~- 71 (325)
T KOG0649|consen 12 TVFAQAISPSKQ-----YLFAGNLFGDIA--------------VLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH- 71 (325)
T ss_pred HHHHHhhCCcce-----EEEEecCCCeEE--------------EEEehhhhccccCCCCCcceeeccccCCCeeeeeee-
Confidence 477788999998 999999999999 5555432111 11111223458999999999998
Q ss_pred CCCEEEEEcCCceEEEEeccCccccccceecc--ccccc-----CCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 92 NGELLASGDDVGKEIWYLTERESGIANVEFAS--DLSRH-----QKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 92 dg~~las~~d~~v~iw~~~~~~~~~~~~~~~~--~~~~h-----~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
..+|++|+|+.|+=|........... +... ...-| --.|+++...|..+.+++++.|+.++-||+++++.
T Consensus 72 -d~~Lls~gdG~V~gw~W~E~~es~~~-K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i- 148 (325)
T KOG0649|consen 72 -DDFLLSGGDGLVYGWEWNEEEESLAT-KRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRI- 148 (325)
T ss_pred -hhheeeccCceEEEeeehhhhhhccc-hhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEE-
Confidence 67899999999998887654321100 0000 01112 23588999999888788888999999999999984
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC----------C
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH----------K 234 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----------~ 234 (621)
.+.+++|...|.++.--.....+++|++||++++||.++++++..+... .
T Consensus 149 --------------------~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g 208 (325)
T KOG0649|consen 149 --------------------QREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWG 208 (325)
T ss_pred --------------------EEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccC
Confidence 5888999999999998555668999999999999999999998877432 2
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeE
Q psy15549 235 KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL 314 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l 314 (621)
..|.+++. +..+|++| ....+.+|.++..+....+. ....+..+.|..| .+
T Consensus 209 ~wigala~--~edWlvCG-gGp~lslwhLrsse~t~vfp------------------------ipa~v~~v~F~~d--~v 259 (325)
T KOG0649|consen 209 KWIGALAV--NEDWLVCG-GGPKLSLWHLRSSESTCVFP------------------------IPARVHLVDFVDD--CV 259 (325)
T ss_pred ceeEEEec--cCceEEec-CCCceeEEeccCCCceEEEe------------------------cccceeEeeeecc--eE
Confidence 23555554 46788755 45679999999988776663 2345567777655 34
Q ss_pred EeccccccCCCCCCcceeeeee
Q psy15549 315 IAPSGCLENSDSTRKPISVTHV 336 (621)
Q Consensus 315 ~~~s~~~~~~d~~i~~~~~~~~ 336 (621)
++++ ....+.-|.+...
T Consensus 260 l~~G-----~g~~v~~~~l~Gv 276 (325)
T KOG0649|consen 260 LIGG-----EGNHVQSYTLNGV 276 (325)
T ss_pred EEec-----cccceeeeeeccE
Confidence 4444 4456666665543
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-18 Score=157.67 Aligned_cols=212 Identities=19% Similarity=0.268 Sum_probs=167.5
Q ss_pred ccccccCcEEEEEEcc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCc
Q psy15549 76 DLSRHQKAVNVVRFSP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDEST 152 (621)
Q Consensus 76 ~~~~h~~~V~~l~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~ 152 (621)
.+.||+++|..++|+| +...||+|+ |.+|.||.+..+........++..|.+|...|-.++|+|. .+.|++++.|.+
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 4789999999999999 667889998 7789999999886655556778889999999999999994 468999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 232 (621)
|.+|++.++..+- .+ .|...|+++.|+.||.+|++.+.|..|+|||.++++.+..-.+
T Consensus 156 v~iWnv~tgeali---------------------~l-~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~ 213 (472)
T KOG0303|consen 156 VSIWNVGTGEALI---------------------TL-DHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVA 213 (472)
T ss_pred EEEEeccCCceee---------------------ec-CCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeeccc
Confidence 9999999998652 23 3999999999999999999999999999999999999988877
Q ss_pred CCc-ceEEEEEcCCCCEEEEEe---CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeec
Q psy15549 233 HKK-FVQGVAWDPKNQYVATLS---SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 233 ~~~-~v~~l~~sp~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 308 (621)
|.+ .-..+.|-.+|..+-+|- ++..+-+||....+.--.+ ..-.....|.---|.
T Consensus 214 heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~---------------------~elDtSnGvl~PFyD 272 (472)
T KOG0303|consen 214 HEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIAL---------------------QELDTSNGVLLPFYD 272 (472)
T ss_pred ccCCCcceeEEeccCceeeeccccccccceeccCcccccCccee---------------------EEeccCCceEEeeec
Confidence 865 344566888888554443 3678999987654321111 001112334555678
Q ss_pred CCCCeEEeccccccCCCCCCcceeee
Q psy15549 309 PDGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 309 pdg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
+|.+.++.++. .|+.|+-|.+.
T Consensus 273 ~dt~ivYl~GK----GD~~IRYyEit 294 (472)
T KOG0303|consen 273 PDTSIVYLCGK----GDSSIRYFEIT 294 (472)
T ss_pred CCCCEEEEEec----CCcceEEEEec
Confidence 88888887775 68888888765
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-17 Score=152.05 Aligned_cols=316 Identities=16% Similarity=0.156 Sum_probs=211.2
Q ss_pred CCCeEEEEECCCCC-EEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEE
Q psy15549 129 QKAVNVVRFSPNGE-LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL 207 (621)
Q Consensus 129 ~~~V~~i~~sp~g~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l 207 (621)
..+|..+.|.++.. .|++|+.|..|++|.+.....-.. .........+..|...|+++.|+|+|.+|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~------------~~~V~y~s~Ls~H~~aVN~vRf~p~gelL 80 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGG------------DMKVEYLSSLSRHTRAVNVVRFSPDGELL 80 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCC------------ceeEEEeecccCCcceeEEEEEcCCcCee
Confidence 35789999998765 999999999999999887654321 02334567888999999999999999999
Q ss_pred EEEeCCCeEEEEECC--------C--------CcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeee
Q psy15549 208 ISGSVDNTAIMWDVH--------K--------GKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISR 271 (621)
Q Consensus 208 ~s~~~dg~i~vwd~~--------~--------~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~ 271 (621)
++|+.+|.|.+|-.. + ......+.+|...|..++|+|+++++++++-|..+++||+..|+.+..
T Consensus 81 ASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~ 160 (434)
T KOG1009|consen 81 ASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAI 160 (434)
T ss_pred eecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEee
Confidence 999999999999765 2 123456678999999999999999999999999999999999999887
Q ss_pred cccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccC---CCcee
Q psy15549 272 ACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLN---KPAVC 348 (621)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~---~~~~~ 348 (621)
+. .+...+..++|.|-++++++-+ .|...+.+.+.......... .+...
T Consensus 161 ~~-----------------------dh~~yvqgvawDpl~qyv~s~s-----~dr~~~~~~~~~~~~~~~~~~~~m~~~~ 212 (434)
T KOG1009|consen 161 LD-----------------------DHEHYVQGVAWDPLNQYVASKS-----SDRHPEGFSAKLKQVIKRHGLDIMPAKA 212 (434)
T ss_pred cc-----------------------ccccccceeecchhhhhhhhhc-----cCcccceeeeeeeeeeeeeeeeEeeecc
Confidence 75 4456678999999999999888 66655555443222111111 00000
Q ss_pred cCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc----C-----CcEEEEeCCCC-ceeEEEecccccceEEE
Q psy15549 349 LPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT----E-----NNILLYDTQHA-SPFAFIANIHYTKLTDI 418 (621)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----d-----g~i~iwd~~~~-~~~~~~~~~h~~~v~~~ 418 (621)
.....+....+-..-. +..--.+..|.++|..+++.+. . +..++|+...- ++...+. .-..++..+
T Consensus 213 ~~~~e~~s~rLfhDeT---lksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp-~~~k~~lav 288 (434)
T KOG1009|consen 213 FNEREGKSTRLFHDET---LKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLP-SPKKPALAV 288 (434)
T ss_pred cCCCCcceeeeeecCc---hhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecC-CCCcceEEE
Confidence 0111111111100000 0000014445556666665442 2 24466665443 2344442 234455555
Q ss_pred EEcC------------------CCCeEEEEeCCCcEEEEEecCCcCCcccCC-CCCcccccCCCCCCCCcccCCCcccHH
Q psy15549 419 TWSS------------------DGKVLIASSTDGYCSIISFGDNEIGIPYVP-PSGEESKENDPTKGEPVRSEDKPRSAE 479 (621)
Q Consensus 419 ~~sp------------------dg~~l~s~s~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 479 (621)
.|+| -+-.+|.++. ..|++||.++-+....+.. |-..++.+.|+++|..++-.+.||-.-
T Consensus 289 r~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~-~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS 367 (434)
T KOG1009|consen 289 RFSPVYYELRPLSSEKFLFVLPYRLVFAIATK-NSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCS 367 (434)
T ss_pred EeeeeEEEeccccccccccccccceEEEEeec-ceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceE
Confidence 5554 1234555544 5799999998776666655 777899999999999999888888665
Q ss_pred HhcccCcccc
Q psy15549 480 QAKGEGKVLG 489 (621)
Q Consensus 480 ~w~~~~~~~~ 489 (621)
.-..+...++
T Consensus 368 ~vtfe~~elg 377 (434)
T KOG1009|consen 368 LVTFEPWELG 377 (434)
T ss_pred EEEEcchhcc
Confidence 5555544444
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.9e-18 Score=153.06 Aligned_cols=310 Identities=11% Similarity=0.148 Sum_probs=215.2
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccc-ccccCcEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDL-SRHQKAVNVV 87 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~l 87 (621)
+..|.+-|.++.||.+++ +||+|+.|..++ +|++...-..+. .+++... ..|...|.|+
T Consensus 52 ~~~H~GCiNAlqFS~N~~-----~L~SGGDD~~~~--------------~W~~de~~~~k~-~KPI~~~~~~H~SNIF~L 111 (609)
T KOG4227|consen 52 VREHTGCINALQFSHNDR-----FLASGGDDMHGR--------------VWNVDELMVRKT-PKPIGVMEHPHRSNIFSL 111 (609)
T ss_pred hhhhccccceeeeccCCe-----EEeecCCcceee--------------eechHHHHhhcC-CCCceeccCccccceEEE
Confidence 457889999999999998 999999999999 888764322111 1122222 3466899999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
+|....++|.+|. ++.|.+-|+.+... ..+.......+.|..+..+|-.+.|++.+.++.|.+||.+.......
T Consensus 112 ~F~~~N~~~~SG~~~~~VI~HDiEt~qs-----i~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~ 186 (609)
T KOG4227|consen 112 EFDLENRFLYSGERWGTVIKHDIETKQS-----IYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPIS 186 (609)
T ss_pred EEccCCeeEecCCCcceeEeeeccccee-----eeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCc
Confidence 9999999999998 88899999987631 11222223446899999999989999999999999999987663221
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcE-EEE------eccCCcceE
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHKGKN-LGI------LTEHKKFVQ 238 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~-~~~------~~~~~~~v~ 238 (621)
. ..+.......+.+.|+|- ..+|++.+..+-+.+||++..+. +.. +......-+
T Consensus 187 ~------------------~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M 248 (609)
T KOG4227|consen 187 L------------------VLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWM 248 (609)
T ss_pred e------------------eeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhh
Confidence 1 233455667889999995 46788888889999999875432 111 111122346
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
++.|+|+|+.|++.-....-.+||+-+..+......+... ..-....|.+++|..|-. +++++
T Consensus 249 ~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~----------------GY~N~~T~KS~~F~~D~~-v~tGS 311 (609)
T KOG4227|consen 249 GSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPN----------------GYCNIKTIKSMTFIDDYT-VATGS 311 (609)
T ss_pred heeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCC----------------cceeeeeeeeeeeeccee-eeccC
Confidence 7889999999988777767778888775432211111000 001123456788877765 77877
Q ss_pred ccccCCCCCCcceeeeeeeeec----------------ccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCc
Q psy15549 319 GCLENSDSTRKPISVTHVFTRA----------------CLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYR 382 (621)
Q Consensus 319 ~~~~~~d~~i~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (621)
.+-.+.+|.+....... ........+.+|...+..++|+| ...
T Consensus 312 -----D~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~----------------H~~ 370 (609)
T KOG4227|consen 312 -----DHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQ----------------HNN 370 (609)
T ss_pred -----cccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecC----------------Ccc
Confidence 67888999875322111 12344567788888888888887 446
Q ss_pred EEEEEEcCCcEEEEeCC
Q psy15549 383 IVIAVATENNILLYDTQ 399 (621)
Q Consensus 383 ~l~~~~~dg~i~iwd~~ 399 (621)
+|++.+-...++||.-.
T Consensus 371 ~l~SSGVE~~~KlWS~~ 387 (609)
T KOG4227|consen 371 LLVSSGVENSFKLWSDH 387 (609)
T ss_pred eEeccchhhheeccccc
Confidence 67777778999999743
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=162.76 Aligned_cols=323 Identities=18% Similarity=0.163 Sum_probs=226.2
Q ss_pred ceeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC--CCCEEEE
Q psy15549 70 NVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--NGELLAS 146 (621)
Q Consensus 70 ~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp--~g~~l~s 146 (621)
.+.+...|..|.+.|+.|.|+..|..|++|+ |..|.+|+..... ..+.-..+|...|....|-| +.+-|++
T Consensus 131 r~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~------~~l~f~SGH~~NvfQaKFiP~s~d~ti~~ 204 (559)
T KOG1334|consen 131 RLRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGS------PKLSFESGHCNNVFQAKFIPFSGDRTIVT 204 (559)
T ss_pred HhhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccC------cccccccccccchhhhhccCCCCCcCcee
Confidence 3455667899999999999999999999999 6779999998774 33444568999999999988 3458999
Q ss_pred EeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCc
Q psy15549 147 GDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKGK 225 (621)
Q Consensus 147 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~~ 225 (621)
++.||.+++=.+........ ...+..|.+.|.-++.-|+. .-|.+++.|+.+.-+|++++.
T Consensus 205 ~s~dgqvr~s~i~~t~~~e~------------------t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~ 266 (559)
T KOG1334|consen 205 SSRDGQVRVSEILETGYVEN------------------TKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDV 266 (559)
T ss_pred ccccCceeeeeeccccceec------------------ceecccccCccceeeecCCCCCcccccccccceeeeeeccCC
Confidence 99999999887665543321 25667899999999999965 568899999999999998876
Q ss_pred EEEEe---ccCCc---ceEEEEEcCCCC-EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCc
Q psy15549 226 NLGIL---TEHKK---FVQGVAWDPKNQ-YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298 (621)
Q Consensus 226 ~~~~~---~~~~~---~v~~l~~sp~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (621)
+...+ ..+.. ....++..|... .+++++.|..+++||.+.-.....-. ..++..+--.....
T Consensus 267 pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~-----------~~~~f~p~hl~~d~ 335 (559)
T KOG1334|consen 267 PAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNG-----------VLDKFCPHHLVEDD 335 (559)
T ss_pred ccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccc-----------hhhhcCCccccccC
Confidence 54433 22333 467888888654 79999999999999987533210000 00011111111133
Q ss_pred ccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCcc
Q psy15549 299 KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFK 378 (621)
Q Consensus 299 ~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (621)
...|++++|+.++.-|.++. .|-.+++++..... .. .+. ..
T Consensus 336 ~v~ITgl~Ysh~~sElLaSY-----nDe~IYLF~~~~~~-G~---~p~-------------~~----------------- 376 (559)
T KOG1334|consen 336 PVNITGLVYSHDGSELLASY-----NDEDIYLFNKSMGD-GS---EPD-------------PS----------------- 376 (559)
T ss_pred cccceeEEecCCccceeeee-----cccceEEecccccc-CC---CCC-------------CC-----------------
Confidence 44578888887765555544 34333333211000 00 000 00
Q ss_pred CCCcEEEEEEcCCcEEEEeCCCCceeEEEeccccc--ceEEEE-EcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCC
Q psy15549 379 LPYRIVIAVATENNILLYDTQHASPFAFIANIHYT--KLTDIT-WSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSG 455 (621)
Q Consensus 379 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~--~v~~~~-~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~ 455 (621)
.++ ...+.....+|.. .|..+- |-|...|+++||+-|.|.||+-.++++++.+.+...
T Consensus 377 -------------s~~------~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~ 437 (559)
T KOG1334|consen 377 -------------SPR------EQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRH 437 (559)
T ss_pred -------------cch------hhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccc
Confidence 000 0112222345654 355554 578889999999999999999999999999999888
Q ss_pred cccccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 456 EESKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 456 ~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
.++++.-+|-...|++.+.+..|++|...+
T Consensus 438 VVNCLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 438 VVNCLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred eEeccCCCCCCchhhccCCccceeeecCCc
Confidence 999999999999999999999999998533
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.6e-17 Score=140.97 Aligned_cols=292 Identities=17% Similarity=0.253 Sum_probs=202.6
Q ss_pred CcEEEEEEcc--C-CCEEEEEc-----CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCC-----EEEEEe
Q psy15549 82 KAVNVVRFSP--N-GELLASGD-----DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE-----LLASGD 148 (621)
Q Consensus 82 ~~V~~l~~sp--d-g~~las~~-----d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~-----~l~s~s 148 (621)
-.++++.||. + .-+||.|+ .+.|.|..+....... ..... -.|.-+++.+.|.|+.. +||+++
T Consensus 45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~---~~~a~-fd~~YP~tK~~wiPd~~g~~pdlLATs~ 120 (364)
T KOG0290|consen 45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGEL---VEDAN-FDHPYPVTKLMWIPDSKGVYPDLLATSS 120 (364)
T ss_pred CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCce---eccCC-CCCCCCccceEecCCccccCcchhhccc
Confidence 3578889984 3 45788876 5567888777543321 11111 36888999999999763 666665
Q ss_pred CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCc--
Q psy15549 149 DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGK-- 225 (621)
Q Consensus 149 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~-- 225 (621)
. .+|+|.+........... .+ ....-..+..++++..|+. +-+++.+++-|-++.|||++++.
T Consensus 121 D--~LRlWri~~ee~~~~~~~-~L-----------~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~ 186 (364)
T KOG0290|consen 121 D--FLRLWRIGDEESRVELQS-VL-----------NNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSG 186 (364)
T ss_pred C--eEEEEeccCcCCceehhh-hh-----------ccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeecccc
Confidence 3 699999875322111000 00 0011235677899999987 67899999999999999999873
Q ss_pred -EEEEeccCCcceEEEEEcCCC-CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCccccee
Q psy15549 226 -NLGILTEHKKFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303 (621)
Q Consensus 226 -~~~~~~~~~~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 303 (621)
...++-+|...|..++|...+ +.||+.+.||.||+||++..+....+. .......+..
T Consensus 187 ~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIY--------------------E~p~~~~pLl 246 (364)
T KOG0290|consen 187 TVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIY--------------------EDPSPSTPLL 246 (364)
T ss_pred ceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEe--------------------cCCCCCCcce
Confidence 356677899999999999865 578999999999999999876544333 2222244567
Q ss_pred eeeecCCC-CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCc
Q psy15549 304 RLTFSPDG-QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYR 382 (621)
Q Consensus 304 ~~~~spdg-~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (621)
.++|++.. +++|+... ....+.+.|++ ....++..+.+|...++.++|.|. ...
T Consensus 247 RLswnkqDpnymATf~~----dS~~V~iLDiR------~P~tpva~L~~H~a~VNgIaWaPh---------------S~~ 301 (364)
T KOG0290|consen 247 RLSWNKQDPNYMATFAM----DSNKVVILDIR------VPCTPVARLRNHQASVNGIAWAPH---------------SSS 301 (364)
T ss_pred eeccCcCCchHHhhhhc----CCceEEEEEec------CCCcceehhhcCcccccceEecCC---------------CCc
Confidence 89998865 55555441 23445555544 456788899999999999999983 347
Q ss_pred EEEEEEcCCcEEEEeCCCCc------eeEEEecccccceEEEEEcCC-CCeEEEEeCCCcEEEE
Q psy15549 383 IVIAVATENNILLYDTQHAS------PFAFIANIHYTKLTDITWSSD-GKVLIASSTDGYCSII 439 (621)
Q Consensus 383 ~l~~~~~dg~i~iwd~~~~~------~~~~~~~~h~~~v~~~~~spd-g~~l~s~s~dg~i~iw 439 (621)
.|++++.|..+.|||+...- ++.... -.+.|..+.|++. +.+|+.+. +..+.+.
T Consensus 302 hictaGDD~qaliWDl~q~~~~~~~dPilay~--a~~EVNqi~Ws~~~~Dwiai~~-~kkleiL 362 (364)
T KOG0290|consen 302 HICTAGDDCQALIWDLQQMPRENGEDPILAYT--AGGEVNQIQWSSSQPDWIAICF-GKKLEIL 362 (364)
T ss_pred eeeecCCcceEEEEecccccccCCCCchhhhh--ccceeeeeeecccCCCEEEEEe-cCeeeEE
Confidence 79999999999999987642 222221 3468999999964 56777774 4445443
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.8e-17 Score=148.57 Aligned_cols=205 Identities=15% Similarity=0.243 Sum_probs=151.9
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccC
Q psy15549 196 YDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRS 275 (621)
Q Consensus 196 ~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 275 (621)
.+++|+++|..|++|+.||.+|||+..+...+.....|...|.++.|+|||++|++.+.| ..+||+..++..+......
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 789999999999999999999999988888888888899999999999999999999999 8999999999655544311
Q ss_pred CCCCCCccccccccccccccCCcccceeeeeecCCC---CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCc
Q psy15549 276 KLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG---QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSL 352 (621)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg---~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~ 352 (621)
.-+-.+..+.|+.|+ .+++++.. ..-+.++.|++... ........ ......
T Consensus 227 ---------------------~k~~~~~~cRF~~d~~~~~l~laa~~---~~~~~v~~~~~~~w-~~~~~l~~-~~~~~~ 280 (398)
T KOG0771|consen 227 ---------------------SKDEMFSSCRFSVDNAQETLRLAASQ---FPGGGVRLCDISLW-SGSNFLRL-RKKIKR 280 (398)
T ss_pred ---------------------ccchhhhhceecccCCCceEEEEEec---CCCCceeEEEeeee-ccccccch-hhhhhc
Confidence 112234567888776 33333221 03344444444321 11110010 011111
Q ss_pred ccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeC
Q psy15549 353 QYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASST 432 (621)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~ 432 (621)
...+.++..+ .+|++++.|+.+|.|.|++..+.+.++.....|...|+.+.|+||.+++++.+.
T Consensus 281 ~~siSsl~VS----------------~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs 344 (398)
T KOG0771|consen 281 FKSISSLAVS----------------DDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSS 344 (398)
T ss_pred cCcceeEEEc----------------CCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCccccccc
Confidence 1233333333 378899999999999999999999999998899999999999999999999999
Q ss_pred CCcEEEEEecC
Q psy15549 433 DGYCSIISFGD 443 (621)
Q Consensus 433 dg~i~iw~~~~ 443 (621)
|....+..+.-
T Consensus 345 ~~~~~v~~l~v 355 (398)
T KOG0771|consen 345 DNEAAVTKLAV 355 (398)
T ss_pred CCceeEEEEee
Confidence 99999998874
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-17 Score=148.65 Aligned_cols=277 Identities=12% Similarity=0.145 Sum_probs=187.1
Q ss_pred EEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECC--CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--NGELLASGDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 95 ~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp--~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
++++.+.+.|++|+..++ ..+..+.++...++.++|.. ....+.+|+.||+|++||++.......+
T Consensus 43 vav~lSngsv~lyd~~tg-------~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~----- 110 (376)
T KOG1188|consen 43 VAVSLSNGSVRLYDKGTG-------QLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARI----- 110 (376)
T ss_pred EEEEecCCeEEEEeccch-------hhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhhe-----
Confidence 344456999999999986 67888999999999999987 4568999999999999999998876443
Q ss_pred ccccccccceeeeeeecCCC-CCeEEEEECCCCCEEEEEeC----CCeEEEEECCCCcE-EEEe-ccCCcceEEEEEcCC
Q psy15549 173 DEENVNKEHWIVTKILRGHL-EDVYDISWSPTSTHLISGSV----DNTAIMWDVHKGKN-LGIL-TEHKKFVQGVAWDPK 245 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~-~~v~~i~~spd~~~l~s~~~----dg~i~vwd~~~~~~-~~~~-~~~~~~v~~l~~sp~ 245 (621)
....+. .+..|++.+-.++.+++|.. +-.|.+||++..+. +..+ ..|...|++++|+|.
T Consensus 111 --------------~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~ 176 (376)
T KOG1188|consen 111 --------------SWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPS 176 (376)
T ss_pred --------------eccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCC
Confidence 233444 56788888778888888865 67899999998765 4444 579999999999995
Q ss_pred -CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCC
Q psy15549 246 -NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENS 324 (621)
Q Consensus 246 -~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~ 324 (621)
.+.|++|+.||.|.+||+..... .-.+...-++.+.|.++.|..++-
T Consensus 177 ~pnlLlSGSvDGLvnlfD~~~d~E--------------------eDaL~~viN~~sSI~~igw~~~~y------------ 224 (376)
T KOG1188|consen 177 DPNLLLSGSVDGLVNLFDTKKDNE--------------------EDALLHVINHGSSIHLIGWLSKKY------------ 224 (376)
T ss_pred CCCeEEeecccceEEeeecCCCcc--------------------hhhHHHhhcccceeeeeeeecCCc------------
Confidence 57899999999999999865321 011122234455567777776651
Q ss_pred CCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCcee
Q psy15549 325 DSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPF 404 (621)
Q Consensus 325 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 404 (621)
..|.+.+..++..+|++..+...
T Consensus 225 ---------------------------------------------------------krI~clTH~Etf~~~ele~~~~~ 247 (376)
T KOG1188|consen 225 ---------------------------------------------------------KRIMCLTHMETFAIYELEDGSEE 247 (376)
T ss_pred ---------------------------------------------------------ceEEEEEccCceeEEEccCCChh
Confidence 12333334556666666665533
Q ss_pred EEEecc-----------cccceEEEEEcCCCCeEEEEeC-CCcEEEEEec---CCcCCcc---cCC-CCCcccccCCCCC
Q psy15549 405 AFIANI-----------HYTKLTDITWSSDGKVLIASST-DGYCSIISFG---DNEIGIP---YVP-PSGEESKENDPTK 465 (621)
Q Consensus 405 ~~~~~~-----------h~~~v~~~~~spdg~~l~s~s~-dg~i~iw~~~---~~~~~~~---~~~-~~~~~~~~~~~~~ 465 (621)
..+... ....+.......++..++.++. -|...++-+. ++..... +.+ +...+..+.|...
T Consensus 248 ~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~ 327 (376)
T KOG1188|consen 248 TWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVK 327 (376)
T ss_pred hcccCccchhhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcc
Confidence 333211 0011222222234555665554 5666666554 3443333 333 3444666777788
Q ss_pred CCCcccCCCcccHHHhcccCc
Q psy15549 466 GEPVRSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 466 ~~~~~s~~~~~~~~~w~~~~~ 486 (621)
+..+.+++.||.+..|+.++.
T Consensus 328 ~~~l~TGGEDG~l~~Wk~~da 348 (376)
T KOG1188|consen 328 NDVLYTGGEDGLLQAWKVEDA 348 (376)
T ss_pred cceeeccCCCceEEEEecCCc
Confidence 889999999999999986443
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.9e-17 Score=137.58 Aligned_cols=296 Identities=14% Similarity=0.169 Sum_probs=192.7
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCcc---ccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERES---GIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWK 157 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~---~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd 157 (621)
..|.+-+|+|.+++|++|. ++.|.+..+..... ....-..+...++|.++|+.++|. ..+|++|+ ||.|+-|.
T Consensus 11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~ 87 (325)
T KOG0649|consen 11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWE 87 (325)
T ss_pred HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEee
Confidence 3577778999999999998 88899998865322 111113344558999999999998 34677776 49999998
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeee---cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCC
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKIL---RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHK 234 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 234 (621)
.+...... ..++.|+...-. ...-..|+++-..|..+-+++++.|+.++-||+++|+....+++|+
T Consensus 88 W~E~~es~-----------~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHt 156 (325)
T KOG0649|consen 88 WNEEEESL-----------ATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHT 156 (325)
T ss_pred ehhhhhhc-----------cchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCc
Confidence 76554310 011122211111 1123468899999988778888889999999999999999999999
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeE
Q psy15549 235 KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL 314 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l 314 (621)
..|.++.--.....+++|++||++|+||.++++.++.+..-+.+.- .......+|.+++. +..++
T Consensus 157 DYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~-------------lRp~~g~wigala~--~edWl 221 (325)
T KOG0649|consen 157 DYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNL-------------LRPDWGKWIGALAV--NEDWL 221 (325)
T ss_pred ceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhh-------------cCcccCceeEEEec--cCceE
Confidence 9999998855556688999999999999999999887753322210 11122334555554 45588
Q ss_pred EeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEE
Q psy15549 315 IAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNIL 394 (621)
Q Consensus 315 ~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 394 (621)
+++. ...+.+|++....... . -.....+..+.| .+..+++++..+.+.
T Consensus 222 vCGg------Gp~lslwhLrsse~t~-------v-fpipa~v~~v~F------------------~~d~vl~~G~g~~v~ 269 (325)
T KOG0649|consen 222 VCGG------GPKLSLWHLRSSESTC-------V-FPIPARVHLVDF------------------VDDCVLIGGEGNHVQ 269 (325)
T ss_pred EecC------CCceeEEeccCCCceE-------E-EecccceeEeee------------------ecceEEEecccccee
Confidence 8876 4677888876422111 1 111222222333 347788899888999
Q ss_pred EEeCCCCceeEEEecccccceEEEEEcCCC-CeEEEEeCCCcEEEEE
Q psy15549 395 LYDTQHASPFAFIANIHYTKLTDITWSSDG-KVLIASSTDGYCSIIS 440 (621)
Q Consensus 395 iwd~~~~~~~~~~~~~h~~~v~~~~~spdg-~~l~s~s~dg~i~iw~ 440 (621)
-|.+..- ....+. ......++..|+..- ++|-.++....+.|+.
T Consensus 270 ~~~l~Gv-l~a~ip-~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~~ 314 (325)
T KOG0649|consen 270 SYTLNGV-LQANIP-VESTACYSASWQTSPIKFISIAGFSNKLHILK 314 (325)
T ss_pred eeeeccE-EEEecc-CCccceeeecccCCceEEEEecccceeeeeee
Confidence 9986543 222222 223345666665443 3444555666666553
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-17 Score=147.22 Aligned_cols=332 Identities=16% Similarity=0.227 Sum_probs=215.6
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
.|.-+.|..|.. ..|.....++.|. +|++...+- ...+....+++.+++|||||+
T Consensus 50 ki~yieW~ads~----~ilC~~yk~~~vq--------------vwsl~Qpew-------~ckIdeg~agls~~~WSPdgr 104 (447)
T KOG4497|consen 50 KIVYIEWKADSC----HILCVAYKDPKVQ--------------VWSLVQPEW-------YCKIDEGQAGLSSISWSPDGR 104 (447)
T ss_pred Hhhheeeeccce----eeeeeeeccceEE--------------EEEeeccee-------EEEeccCCCcceeeeECCCcc
Confidence 466777887775 4566678899999 888774432 334777888999999999997
Q ss_pred EEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 95 LLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 95 ~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
.|+..+ +-.|.+|.+.+.. ...+......+..++|+|+|++.+.++.-...-.+++
T Consensus 105 hiL~tseF~lriTVWSL~t~~--------~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i-------------- 162 (447)
T KOG4497|consen 105 HILLTSEFDLRITVWSLNTQK--------GYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQI-------------- 162 (447)
T ss_pred eEeeeecceeEEEEEEeccce--------eEEecccccCceeEEECCCCceeeeeecccHHHHHHH--------------
Confidence 666555 7789999998753 2223334456789999999999888875321111111
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC--CCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEE
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV--DNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVA 250 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~ 250 (621)
.....|.+.+.+.-..-..+.+.|+|||+.|++-.. +-.|..|. ..-.+..++|+|.+++|+
T Consensus 163 ----~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe------------~~lG~k~v~wsP~~qfla 226 (447)
T KOG4497|consen 163 ----SSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYE------------RGLGLKFVEWSPCNQFLA 226 (447)
T ss_pred ----HhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeee------------eccceeEEEeccccceEE
Confidence 122345455555666667889999999998876443 22222221 223577899999999999
Q ss_pred EEeCCCcEEEEEccCceeeeecccC------C---------C------------CCCCcccc----------------cc
Q psy15549 251 TLSSDRSLRTYSIQSKKVISRACRS------K---------L------------PVDSSHEL----------------FD 287 (621)
Q Consensus 251 s~~~dg~i~iwd~~~~~~~~~~~~~------~---------~------------~~~~~~~~----------------~~ 287 (621)
+|+.|+.+|+.+--+-+....+... . . +...+... ..
T Consensus 227 vGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~ 306 (447)
T KOG4497|consen 227 VGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVH 306 (447)
T ss_pred eeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeee
Confidence 9999999998765443332221100 0 0 00000000 01
Q ss_pred ccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeee
Q psy15549 288 KVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFE 367 (621)
Q Consensus 288 ~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (621)
...+.-...+.+..+..++|++|..|+++-... ....+-+||+.... ....-.....+....|.|
T Consensus 307 ~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~---~PnalW~Wdlq~l~--------l~avLiQk~piraf~WdP---- 371 (447)
T KOG4497|consen 307 KLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDK---YPNALWLWDLQNLK--------LHAVLIQKHPIRAFEWDP---- 371 (447)
T ss_pred cccCCCCCCCcccccceeeecCCceEEeeecCC---CCceEEEEechhhh--------hhhhhhhccceeEEEeCC----
Confidence 111111223345667889999999999986632 45667788876432 222223345566666666
Q ss_pred cCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEE
Q psy15549 368 LKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSI 438 (621)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~i 438 (621)
....++.+....++++|.......+..... .-.|..+.|..+|..|+.++.|.....
T Consensus 372 ------------~~prL~vctg~srLY~W~psg~~~V~vP~~--GF~i~~l~W~~~g~~i~l~~kDafc~a 428 (447)
T KOG4497|consen 372 ------------GRPRLVVCTGKSRLYFWAPSGPRVVGVPKK--GFNIQKLQWLQPGEFIVLCGKDAFCVA 428 (447)
T ss_pred ------------CCceEEEEcCCceEEEEcCCCceEEecCCC--CceeeeEEecCCCcEEEEEcCCceEEE
Confidence 335677777777899999988666665543 368999999999999999999875544
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=3e-16 Score=141.74 Aligned_cols=254 Identities=19% Similarity=0.246 Sum_probs=165.5
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
.-.+..++|++.-- .+|++..|-.|+ +++-........ -..-...|+|++|-|.
T Consensus 98 ~~dlr~~aWhqH~~-----~fava~nddvVr--------------iy~ksst~pt~L-------ks~sQrnvtclawRPl 151 (445)
T KOG2139|consen 98 EIDLRGVAWHQHII-----AFAVATNDDVVR--------------IYDKSSTCPTKL-------KSVSQRNVTCLAWRPL 151 (445)
T ss_pred hcceeeEeechhhh-----hhhhhccCcEEE--------------EeccCCCCCcee-------cchhhcceeEEEeccC
Confidence 44688899999765 889999999999 776655211110 1223567999999994
Q ss_pred -CCEEEEEcCCceEEEEeccCccccccc-------eecccccccCCCeEEEEECCCCCEEEEEe-CCCcEEEEEccCCCC
Q psy15549 93 -GELLASGDDVGKEIWYLTERESGIANV-------EFASDLSRHQKAVNVVRFSPNGELLASGD-DESTIIVWKQKTDQD 163 (621)
Q Consensus 93 -g~~las~~d~~v~iw~~~~~~~~~~~~-------~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~vwd~~~~~~ 163 (621)
+..|+.|+..+|.+|............ ..+....+| .+|++++|.+||..+++++ .|..|.|||.+++..
T Consensus 152 saselavgCr~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~ 230 (445)
T KOG2139|consen 152 SASELAVGCRAGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQK 230 (445)
T ss_pred CcceeeeeecceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCc
Confidence 578889999999999877543221110 111223345 6899999999999999987 467899999999986
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-CcEEEEeccCCcceEEEEE
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK-GKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~l~~ 242 (621)
+.-. ....+.+.-+.|||||.+|+++.-|+..++|+... ....... ...+.|+..+|
T Consensus 231 ~pL~---------------------~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~-lgsgrvqtacW 288 (445)
T KOG2139|consen 231 IPLI---------------------PKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWI-LGSGRVQTACW 288 (445)
T ss_pred cccc---------------------ccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceeccee-ccCCceeeeee
Confidence 5321 23456788999999999999999999999996543 3333333 34458999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccc---ccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHEL---FDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
+|+|++|+.... |.-++|.+.-...-..+.... .+. .+.. .......-.....-+.+.+++|.|.|.+|++..
T Consensus 289 spcGsfLLf~~s-gsp~lysl~f~~~~~~~~~~~-~~k-~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~f 364 (445)
T KOG2139|consen 289 SPCGSFLLFACS-GSPRLYSLTFDGEDSVFLRPQ-SIK-RVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIF 364 (445)
T ss_pred cCCCCEEEEEEc-CCceEEEEeecCCCccccCcc-cce-eeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEE
Confidence 999999776554 334566553221111111000 000 0000 000000001122345678999999999999865
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.4e-17 Score=152.42 Aligned_cols=229 Identities=17% Similarity=0.216 Sum_probs=160.8
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
...-+.+|.+-|.|++|+.||. +|++|+.|-.+. |||....+.... .-.+|...|
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~-----lL~SGSDD~r~i--------------vWd~~~~Kllhs------I~TgHtaNI 96 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGE-----LLASGSDDTRLI--------------VWDPFEYKLLHS------ISTGHTANI 96 (758)
T ss_pred hhhhhccccceecceeecCCCC-----EEeecCCcceEE--------------eecchhcceeee------eecccccce
Confidence 3455778999999999999999 999999999999 999875544322 347999999
Q ss_pred EEEEEcc--CCCEEEEEc-CCceEEEEeccCccc---cccceecccccccCCCeEEEEECCCC-CEEEEEeCCCcEEEEE
Q psy15549 85 NVVRFSP--NGELLASGD-DVGKEIWYLTERESG---IANVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDESTIIVWK 157 (621)
Q Consensus 85 ~~l~~sp--dg~~las~~-d~~v~iw~~~~~~~~---~~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg~i~vwd 157 (621)
.++.|-| +.+++++|. |..|+++|+...... ...-.....+..|...|..++-.|++ ..+.++++||+|+-+|
T Consensus 97 FsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyD 176 (758)
T KOG1310|consen 97 FSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYD 176 (758)
T ss_pred eEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeec
Confidence 9999999 456777776 888999999853211 11124455667899999999999988 7899999999999999
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCC--------Cc---
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHK--------GK--- 225 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~--------~~--- 225 (621)
++....-..- .. .......+...--...|+..+|. ..+|++|+.|--.++||.+. +.
T Consensus 177 iREph~c~p~------~~-----~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~ 245 (758)
T KOG1310|consen 177 IREPHVCNPD------ED-----CPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNT 245 (758)
T ss_pred ccCCccCCcc------cc-----ccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccC
Confidence 9875321100 00 00000111122245679999994 46899999999999999532 11
Q ss_pred -------EEEEe-ccCC-----------cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceee
Q psy15549 226 -------NLGIL-TEHK-----------KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVI 269 (621)
Q Consensus 226 -------~~~~~-~~~~-----------~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 269 (621)
++.-+ .+|. ..++-+.|+|+|.-|++.-..-.|+++|+..++..
T Consensus 246 ~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~ 308 (758)
T KOG1310|consen 246 CPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSP 308 (758)
T ss_pred CCCcccchhheecCccccCcccccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCc
Confidence 12111 1121 12466789999988776655567999999766543
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.2e-16 Score=139.40 Aligned_cols=210 Identities=19% Similarity=0.293 Sum_probs=158.0
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEcc
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
..+|+|.+|++|+..+|.+. ...+.||...... .++..+++..|...|++|+|+|..+.|++|+.|..-+||...
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~----~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~ 85 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGAD----LWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQP 85 (361)
T ss_pred cCceeeeeecCCCceEEeccCCceEEEEEecCCC----CceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccC
Confidence 46899999999999999988 6689999988764 247889999999999999999999999999999999999884
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE----EEeccCCc
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL----GILTEHKK 235 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~----~~~~~~~~ 235 (621)
.+. .|.....+..+...++++.|+|.++.||+|+....|.||-++...-- +.-+.+..
T Consensus 86 ~~~------------------~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirS 147 (361)
T KOG1523|consen 86 SGG------------------TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRS 147 (361)
T ss_pred CCC------------------eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCcccc
Confidence 433 24455677789999999999999999999999999999987643321 12245677
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccc-ccccccccccCCcccceeeeeecCCCCeE
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHEL-FDKVVPLFHDDTMKSFFRRLTFSPDGQLL 314 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~spdg~~l 314 (621)
.|.++.|+|++-.|+.|+.|+..|+|..-- +.......+.+-+..+ +.... .......+++..+.|+|+|..|
T Consensus 148 tv~sldWhpnnVLlaaGs~D~k~rVfSayI----K~Vdekpap~pWgsk~PFG~lm--~E~~~~ggwvh~v~fs~sG~~l 221 (361)
T KOG1523|consen 148 TVTSLDWHPNNVLLAAGSTDGKCRVFSAYI----KGVDEKPAPTPWGSKMPFGQLM--SEASSSGGWVHGVLFSPSGNRL 221 (361)
T ss_pred ceeeeeccCCcceecccccCcceeEEEEee----eccccCCCCCCCccCCcHHHHH--HhhccCCCceeeeEeCCCCCEe
Confidence 899999999999999999999999997632 2222222211111111 00001 1111445677888888888887
Q ss_pred Eecc
Q psy15549 315 IAPS 318 (621)
Q Consensus 315 ~~~s 318 (621)
+-.+
T Consensus 222 awv~ 225 (361)
T KOG1523|consen 222 AWVG 225 (361)
T ss_pred eEec
Confidence 7655
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=5e-16 Score=156.26 Aligned_cols=276 Identities=17% Similarity=0.241 Sum_probs=183.3
Q ss_pred eEEeccccccccceeeccccccccCcEEEEEEccC-CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEE
Q psy15549 58 IWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVV 135 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd-g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i 135 (621)
||++........ .-.-...|.|++|+|. ..+|+.|. +|.|.+||+..+...... ........|..+++.+
T Consensus 226 vW~~~~p~~Pe~-------~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s-~ls~~~~sh~~~v~~v 297 (555)
T KOG1587|consen 226 VWSLKNPNTPEL-------VLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPS-GLSALEVSHSEPVTAV 297 (555)
T ss_pred EEecCCCCCceE-------EEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCc-ccccccccCCcCeEEE
Confidence 999987733222 2234678999999995 45666666 899999999987543211 1222345689999999
Q ss_pred EECCCC--CEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeC
Q psy15549 136 RFSPNG--ELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSV 212 (621)
Q Consensus 136 ~~sp~g--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~ 212 (621)
.|..+. .-|++++.||.|..|+++.-.............. ...-......+++++|.+ +-..++.|+.
T Consensus 298 vW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~---------~~~~~~~~~~~t~~~F~~~~p~~FiVGTe 368 (555)
T KOG1587|consen 298 VWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKH---------KGQQSSKAVGATSLKFEPTDPNHFIVGTE 368 (555)
T ss_pred EEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccc---------cccccccccceeeEeeccCCCceEEEEcC
Confidence 997744 4599999999999998776544221100000000 000112345689999988 5578999999
Q ss_pred CCeEEEEE---CCCCc-----EEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEcc-CceeeeecccCCCCCCCcc
Q psy15549 213 DNTAIMWD---VHKGK-----NLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQ-SKKVISRACRSKLPVDSSH 283 (621)
Q Consensus 213 dg~i~vwd---~~~~~-----~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~ 283 (621)
+|.|.--+ ..... ....+..|.++|.++.++|=+..++..+.|-+++||... ....+.
T Consensus 369 ~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~------------- 435 (555)
T KOG1587|consen 369 EGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLL------------- 435 (555)
T ss_pred CcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcch-------------
Confidence 99887733 22221 123455688999999999977655544459999999876 322222
Q ss_pred ccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccc
Q psy15549 284 ELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCP 363 (621)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (621)
........+++++|||-...+
T Consensus 436 ----------~~~~~~~~v~~vaWSptrpav------------------------------------------------- 456 (555)
T KOG1587|consen 436 ----------SLDSSPDYVTDVAWSPTRPAV------------------------------------------------- 456 (555)
T ss_pred ----------hhhhccceeeeeEEcCcCceE-------------------------------------------------
Confidence 222233346778888765433
Q ss_pred eeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC--ceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 364 VLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA--SPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
++++..+|.|.|||+... .++.... .+....+.+.|+++|+.|+.|...|++.+|++
T Consensus 457 --------------------F~~~d~~G~l~iWDLl~~~~~Pv~s~~-~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l 515 (555)
T KOG1587|consen 457 --------------------FATVDGDGNLDIWDLLQDDEEPVLSQK-VCSPALTRVRWSPNGKLLAVGDANGTTHILKL 515 (555)
T ss_pred --------------------EEEEcCCCceehhhhhccccCCccccc-ccccccceeecCCCCcEEEEecCCCcEEEEEc
Confidence 344456888888887654 3444443 24667788899999999999999999999998
Q ss_pred cC
Q psy15549 442 GD 443 (621)
Q Consensus 442 ~~ 443 (621)
..
T Consensus 516 ~~ 517 (555)
T KOG1587|consen 516 SE 517 (555)
T ss_pred Cc
Confidence 74
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.6e-17 Score=149.38 Aligned_cols=200 Identities=19% Similarity=0.299 Sum_probs=152.4
Q ss_pred EEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEE
Q psy15549 17 LSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL 96 (621)
Q Consensus 17 ~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~l 96 (621)
.+++|+++|. .|++|+.||++| ||++....... ....|.+.|.++.|||||++|
T Consensus 148 k~vaf~~~gs-----~latgg~dg~lR--------------v~~~Ps~~t~l-------~e~~~~~eV~DL~FS~dgk~l 201 (398)
T KOG0771|consen 148 KVVAFNGDGS-----KLATGGTDGTLR--------------VWEWPSMLTIL-------EEIAHHAEVKDLDFSPDGKFL 201 (398)
T ss_pred eEEEEcCCCC-----EeeeccccceEE--------------EEecCcchhhh-------hhHhhcCccccceeCCCCcEE
Confidence 7899999998 999999999999 88877655433 367899999999999999999
Q ss_pred EEEcCCceEEEEeccCccccccceeccccc--ccCCCeEEEEECCCC---CE--EEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 97 ASGDDVGKEIWYLTERESGIANVEFASDLS--RHQKAVNVVRFSPNG---EL--LASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 97 as~~d~~v~iw~~~~~~~~~~~~~~~~~~~--~h~~~V~~i~~sp~g---~~--l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
++-+.+..+||+...+. .+.... ........+.|+.++ .+ ++....-+.|+.|++.....-..+
T Consensus 202 asig~d~~~VW~~~~g~-------~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l-- 272 (398)
T KOG0771|consen 202 ASIGADSARVWSVNTGA-------ALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFL-- 272 (398)
T ss_pred EEecCCceEEEEeccCc-------hhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeecccccc--
Confidence 99885599999999872 222222 233456678888776 32 233344556777766544321000
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCcceEEEEEcCCCCE
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL-TEHKKFVQGVAWDPKNQY 248 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~v~~l~~sp~~~~ 248 (621)
...........|.+++.++||++++.|+.||.|-|++..+.+.++.. +.|...|+.+.|+|+.++
T Consensus 273 --------------~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~ 338 (398)
T KOG0771|consen 273 --------------RLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRY 338 (398)
T ss_pred --------------chhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCc
Confidence 00112233456999999999999999999999999999988877665 569999999999999999
Q ss_pred EEEEeCCCcEEEEEccC
Q psy15549 249 VATLSSDRSLRTYSIQS 265 (621)
Q Consensus 249 l~s~~~dg~i~iwd~~~ 265 (621)
+++.+.+....+..+.-
T Consensus 339 ~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 339 LASVSSDNEAAVTKLAV 355 (398)
T ss_pred ccccccCCceeEEEEee
Confidence 99999999988887754
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.3e-16 Score=159.29 Aligned_cols=234 Identities=18% Similarity=0.184 Sum_probs=159.9
Q ss_pred CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC---CcEEEEEccCCCCCCCCCCCCccccccc
Q psy15549 102 VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE---STIIVWKQKTDQDLPEFPSSNLDEENVN 178 (621)
Q Consensus 102 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~ 178 (621)
..+.+||.... . ...+..|...+..++|+|||+.|++++.+ ..|++||+.++...
T Consensus 184 ~~i~i~d~dg~-------~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~-------------- 241 (429)
T PRK01742 184 YEVRVADYDGF-------N-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARK-------------- 241 (429)
T ss_pred EEEEEECCCCC-------C-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceE--------------
Confidence 46788887654 1 34456778889999999999999987643 46999999876531
Q ss_pred ccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEE--EECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEe-C
Q psy15549 179 KEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIM--WDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLS-S 254 (621)
Q Consensus 179 ~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~v--wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~-~ 254 (621)
....+.+| ...++|+|||+.|+.++ .+|.+.| ||+.++.. ..+..+...+..+.|+|||+.|+.++ .
T Consensus 242 -----~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~ 312 (429)
T PRK01742 242 -----VVASFRGH---NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDR 312 (429)
T ss_pred -----EEecCCCc---cCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECC
Confidence 01122233 34689999999888765 5776555 56666654 45556677788999999999877665 5
Q ss_pred CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeee
Q psy15549 255 DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 255 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
+|..+||++........... ... ....|+|||++|++.+
T Consensus 313 ~g~~~I~~~~~~~~~~~~l~-----------------------~~~--~~~~~SpDG~~ia~~~---------------- 351 (429)
T PRK01742 313 SGSPQVYRMSASGGGASLVG-----------------------GRG--YSAQISADGKTLVMIN---------------- 351 (429)
T ss_pred CCCceEEEEECCCCCeEEec-----------------------CCC--CCccCCCCCCEEEEEc----------------
Confidence 78888888754221111100 001 2367888888877654
Q ss_pred eeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccc
Q psy15549 335 HVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTK 414 (621)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~ 414 (621)
. ..+.+||+.+++..... ..+ .
T Consensus 352 ------------------------------------------------------~-~~i~~~Dl~~g~~~~lt-~~~--~ 373 (429)
T PRK01742 352 ------------------------------------------------------G-DNVVKQDLTSGSTEVLS-STF--L 373 (429)
T ss_pred ------------------------------------------------------C-CCEEEEECCCCCeEEec-CCC--C
Confidence 1 23556788777644322 212 2
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEEec--CCcCCcccCCCCCcccccCCCCC
Q psy15549 415 LTDITWSSDGKVLIASSTDGYCSIISFG--DNEIGIPYVPPSGEESKENDPTK 465 (621)
Q Consensus 415 v~~~~~spdg~~l~s~s~dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~ 465 (621)
..++.|+|||++|++++.+|.+.+|.+. +|...+.+..+.+.+....|+|.
T Consensus 374 ~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 374 DESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred CCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence 3567899999999999999999998874 57778888877777777778764
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-15 Score=149.67 Aligned_cols=274 Identities=14% Similarity=0.146 Sum_probs=169.1
Q ss_pred EcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcEEEEEccCCCCCCCCCCCCcccccc
Q psy15549 99 GDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTIIVWKQKTDQDLPEFPSSNLDEENV 177 (621)
Q Consensus 99 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 177 (621)
+.+++|.+|++...+ .+..+..+. +.+....++++|++++|++++ .++.|.+|++.....+..
T Consensus 9 ~~~~~I~~~~~~~~g----~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~----------- 72 (330)
T PRK11028 9 PESQQIHVWNLNHEG----ALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTF----------- 72 (330)
T ss_pred CCCCCEEEEEECCCC----ceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEE-----------
Confidence 448899999996432 223334443 335577899999999887664 578899999973221110
Q ss_pred cccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCC-C---cEEEEeccCCcceEEEEEcCCCCEEEEE
Q psy15549 178 NKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHK-G---KNLGILTEHKKFVQGVAWDPKNQYVATL 252 (621)
Q Consensus 178 ~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~-~---~~~~~~~~~~~~v~~l~~sp~~~~l~s~ 252 (621)
.... ........++|+|++++|++++. ++.|.+|++.+ + +.+..+. +.....+++++|++++++++
T Consensus 73 -------~~~~-~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~ 143 (330)
T PRK11028 73 -------AAES-PLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVP 143 (330)
T ss_pred -------eeee-cCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEe
Confidence 0111 12334678999999998888775 78999999964 2 2233332 23346778999999998665
Q ss_pred e-CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcce
Q psy15549 253 S-SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPI 331 (621)
Q Consensus 253 ~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~ 331 (621)
+ .++.|.+||+.+...+.......... ........++|+|+|++++++.. .
T Consensus 144 ~~~~~~v~v~d~~~~g~l~~~~~~~~~~-----------------~~g~~p~~~~~~pdg~~lyv~~~----~------- 195 (330)
T PRK11028 144 CLKEDRIRLFTLSDDGHLVAQEPAEVTT-----------------VEGAGPRHMVFHPNQQYAYCVNE----L------- 195 (330)
T ss_pred eCCCCEEEEEEECCCCcccccCCCceec-----------------CCCCCCceEEECCCCCEEEEEec----C-------
Confidence 5 46899999997633221110000000 00122367899999998887652 2
Q ss_pred eeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC--Cc--eeEEE
Q psy15549 332 SVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH--AS--PFAFI 407 (621)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~--~~~~~ 407 (621)
++.|.+|++.. ++ .+..+
T Consensus 196 ----------------------------------------------------------~~~v~v~~~~~~~~~~~~~~~~ 217 (330)
T PRK11028 196 ----------------------------------------------------------NSSVDVWQLKDPHGEIECVQTL 217 (330)
T ss_pred ----------------------------------------------------------CCEEEEEEEeCCCCCEEEEEEE
Confidence 34455555442 11 11111
Q ss_pred ec-----ccccceEEEEEcCCCCeEEEEe-CCCcEEEEEecCCcC----CcccCCCCCcccccCCCCCCCCcccCC-Ccc
Q psy15549 408 AN-----IHYTKLTDITWSSDGKVLIASS-TDGYCSIISFGDNEI----GIPYVPPSGEESKENDPTKGEPVRSED-KPR 476 (621)
Q Consensus 408 ~~-----~h~~~v~~~~~spdg~~l~s~s-~dg~i~iw~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~ 476 (621)
.. .+......+.|+|+|++|+++. .++.|.+|+++.... ...... ......+.++++|+.++.+. .++
T Consensus 218 ~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~ 296 (330)
T PRK11028 218 DMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSH 296 (330)
T ss_pred ecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec-cccCCceEECCCCCEEEEEEccCC
Confidence 10 0112344689999999999885 478999999975432 222221 12344568889999887654 478
Q ss_pred cHHHhccc
Q psy15549 477 SAEQAKGE 484 (621)
Q Consensus 477 ~~~~w~~~ 484 (621)
.+.+|+..
T Consensus 297 ~v~v~~~~ 304 (330)
T PRK11028 297 HISVYEID 304 (330)
T ss_pred cEEEEEEc
Confidence 88888754
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-16 Score=139.09 Aligned_cols=253 Identities=15% Similarity=0.255 Sum_probs=178.3
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccccc--ceeeccccccccCcEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIA--NVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~--~~~~~~~~~~h~~~V~~l 87 (621)
+.|.-|++.+.|.|+...-...+|||.+ -.+| +|.+...+.... ..-....-..+.+++++.
T Consensus 93 fd~~YP~tK~~wiPd~~g~~pdlLATs~--D~LR--------------lWri~~ee~~~~~~~~L~~~kns~~~aPlTSF 156 (364)
T KOG0290|consen 93 FDHPYPVTKLMWIPDSKGVYPDLLATSS--DFLR--------------LWRIGDEESRVELQSVLNNNKNSEFCAPLTSF 156 (364)
T ss_pred CCCCCCccceEecCCccccCcchhhccc--CeEE--------------EEeccCcCCceehhhhhccCcccccCCccccc
Confidence 5688899999999998522334555544 3677 888874322111 000011123456789999
Q ss_pred EEcc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCC-CEEEEEeCCCcEEEEEccCCCCC
Q psy15549 88 RFSP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 88 ~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
.|+. +-++|.+++ |.+..||++..+... ....++-.|...|..|+|...+ +.||+++.||.||+||++.....
T Consensus 157 DWne~dp~~igtSSiDTTCTiWdie~~~~~----~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHS 232 (364)
T KOG0290|consen 157 DWNEVDPNLIGTSSIDTTCTIWDIETGVSG----TVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHS 232 (364)
T ss_pred ccccCCcceeEeecccCeEEEEEEeecccc----ceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccc
Confidence 9987 667888888 999999999986221 3455677899999999999854 48999999999999999987654
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCC-CeEEEEECCC-CcEEEEeccCCcceEEEE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVD-NTAIMWDVHK-GKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~d-g~i~vwd~~~-~~~~~~~~~~~~~v~~l~ 241 (621)
..+ ..-.....+..-++|++ |-+++|+-..| ..|.|.|++. ..++..++.|.+.|.+++
T Consensus 233 TII------------------YE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIa 294 (364)
T KOG0290|consen 233 TII------------------YEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIA 294 (364)
T ss_pred eEE------------------ecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceE
Confidence 222 11112245678899988 55788876554 5799999986 467888999999999999
Q ss_pred EcCCC-CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC-CCCeEEecc
Q psy15549 242 WDPKN-QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP-DGQLLIAPS 318 (621)
Q Consensus 242 ~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-dg~~l~~~s 318 (621)
|.|.. ..|++++.|..+.|||+.+.-... . ..| ...| ...+.|..+.|++ .+.+++++.
T Consensus 295 WaPhS~~hictaGDD~qaliWDl~q~~~~~-~---~dP-----------ilay---~a~~EVNqi~Ws~~~~Dwiai~~ 355 (364)
T KOG0290|consen 295 WAPHSSSHICTAGDDCQALIWDLQQMPREN-G---EDP-----------ILAY---TAGGEVNQIQWSSSQPDWIAICF 355 (364)
T ss_pred ecCCCCceeeecCCcceEEEEecccccccC-C---CCc-----------hhhh---hccceeeeeeecccCCCEEEEEe
Confidence 99964 679999999999999997632200 0 000 0011 2355688999996 467777765
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-15 Score=151.92 Aligned_cols=274 Identities=18% Similarity=0.252 Sum_probs=190.7
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
.|++.+....+|+|++|+|... ++||.|..+|.|. +||+..+.... ...+......|..+|
T Consensus 234 ~Pe~~~~~~s~v~~~~f~p~~p----~ll~gG~y~GqV~--------------lWD~~~~~~~~-~s~ls~~~~sh~~~v 294 (555)
T KOG1587|consen 234 TPELVLESPSEVTCLKFCPFDP----NLLAGGCYNGQVV--------------LWDLRKGSDTP-PSGLSALEVSHSEPV 294 (555)
T ss_pred CceEEEecCCceeEEEeccCCc----ceEEeeccCceEE--------------EEEccCCCCCC-CcccccccccCCcCe
Confidence 5788899999999999999887 6889999999999 88877665421 111223346789999
Q ss_pred EEEEEccCC--CEEEEE-cCCceEEEEeccCccccccceecccc-----cccCCCeEEEEECC-CCCEEEEEeCCCcEEE
Q psy15549 85 NVVRFSPNG--ELLASG-DDVGKEIWYLTERESGIANVEFASDL-----SRHQKAVNVVRFSP-NGELLASGDDESTIIV 155 (621)
Q Consensus 85 ~~l~~spdg--~~las~-~d~~v~iw~~~~~~~~~~~~~~~~~~-----~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~v 155 (621)
..+.|..+- .-++++ +||.|..|+++.-............. ......+++++|.+ +-..++.|+++|.|..
T Consensus 295 ~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~ 374 (555)
T KOG1587|consen 295 TAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYK 374 (555)
T ss_pred EEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEE
Confidence 999997643 335555 49999999877543221111111111 02234688999988 5568999999998876
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC-CCcEEEEeccCC
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH-KGKNLGILTEHK 234 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~ 234 (621)
=+-.....-.. ........+..|.+.|+++.++|-+..++..+.|.+++||... ...++..+..+.
T Consensus 375 ~~r~g~~~~~~-------------~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~ 441 (555)
T KOG1587|consen 375 GCRKGYTPAPE-------------VSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSP 441 (555)
T ss_pred EeccCCccccc-------------ccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhcc
Confidence 33222221100 0011124566799999999999977655554559999999987 667777787788
Q ss_pred cceEEEEEcCCC-CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 235 KFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 235 ~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
..|++++|||.. ..|+++..||.|.+||+.......... ........+.+.|+++|+.
T Consensus 442 ~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s---------------------~~~~~~~l~~~~~s~~g~~ 500 (555)
T KOG1587|consen 442 DYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLS---------------------QKVCSPALTRVRWSPNGKL 500 (555)
T ss_pred ceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCccc---------------------ccccccccceeecCCCCcE
Confidence 889999999965 567788889999999997644322111 0011234477899999999
Q ss_pred EEeccccccCCCCCCcceeeeee
Q psy15549 314 LIAPSGCLENSDSTRKPISVTHV 336 (621)
Q Consensus 314 l~~~s~~~~~~d~~i~~~~~~~~ 336 (621)
|++|. ..|.+.++++...
T Consensus 501 lavGd-----~~G~~~~~~l~~~ 518 (555)
T KOG1587|consen 501 LAVGD-----ANGTTHILKLSES 518 (555)
T ss_pred EEEec-----CCCcEEEEEcCch
Confidence 99998 8899999988643
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.1e-16 Score=150.06 Aligned_cols=177 Identities=24% Similarity=0.385 Sum_probs=133.2
Q ss_pred eecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEE
Q psy15549 120 EFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDIS 199 (621)
Q Consensus 120 ~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 199 (621)
.....+.||++.|+++.|+.+|.+|++|+.|-.+.|||....+.+. ..-.+|...|.++.
T Consensus 41 ~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~Kllh--------------------sI~TgHtaNIFsvK 100 (758)
T KOG1310|consen 41 DLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLH--------------------SISTGHTANIFSVK 100 (758)
T ss_pred chhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceee--------------------eeecccccceeEEe
Confidence 4456789999999999999999999999999999999998776543 44579999999999
Q ss_pred ECC--CCCEEEEEeCCCeEEEEECCCC----------cEEEEeccCCcceEEEEEcCCC-CEEEEEeCCCcEEEEEccCc
Q psy15549 200 WSP--TSTHLISGSVDNTAIMWDVHKG----------KNLGILTEHKKFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSK 266 (621)
Q Consensus 200 ~sp--d~~~l~s~~~dg~i~vwd~~~~----------~~~~~~~~~~~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~ 266 (621)
|-| +.+++++|..|..|+++|+... .....+..|...|..++-.|++ +.+.++++||+|+-||++..
T Consensus 101 FvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREp 180 (758)
T KOG1310|consen 101 FVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREP 180 (758)
T ss_pred eeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCC
Confidence 999 5578899999999999999742 2334456688899999999998 78999999999999999863
Q ss_pred eeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC-eEEeccccccCCCCCCcceeee
Q psy15549 267 KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ-LLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~-~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
..-..-. . ....+.......-...++.++|... +|++|+ .|...++||.+
T Consensus 181 h~c~p~~----~---------~~~~l~ny~~~lielk~ltisp~rp~~laVGg-----sdpfarLYD~R 231 (758)
T KOG1310|consen 181 HVCNPDE----D---------CPSILVNYNPQLIELKCLTISPSRPYYLAVGG-----SDPFARLYDRR 231 (758)
T ss_pred ccCCccc----c---------ccHHHHHhchhhheeeeeeecCCCCceEEecC-----CCchhhhhhhh
Confidence 2211100 0 0000001111112357899999765 556665 78888998854
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-15 Score=152.70 Aligned_cols=297 Identities=14% Similarity=0.156 Sum_probs=195.9
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccc---ccCcEEEEEEcc
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSR---HQKAVNVVRFSP 91 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~---h~~~V~~l~~sp 91 (621)
+-..+.|+|-.+ .++++...-.|+ |||+..+..... +.. -...|+.+++-.
T Consensus 1066 ~pk~~~~hpf~p-----~i~~ad~r~~i~--------------vwd~e~~~~l~~-------F~n~~~~~t~Vs~l~liN 1119 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEP-----QIAAADDRERIR--------------VWDWEKGRLLNG-------FDNGAFPDTRVSDLELIN 1119 (1387)
T ss_pred CCceeeecCCCc-----eeEEcCCcceEE--------------EEecccCceecc-------ccCCCCCCCccceeeeec
Confidence 466788999988 999998888888 888877665322 222 245788888855
Q ss_pred --CCCEEEEEc-CCceEEEEeccCccc-cccceeccccccc----CCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 92 --NGELLASGD-DVGKEIWYLTERESG-IANVEFASDLSRH----QKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 92 --dg~~las~~-d~~v~iw~~~~~~~~-~~~~~~~~~~~~h----~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
|..++++|+ ||.|+||+-...... ...+..-..+.++ .+.=.-+.|..+..+|+++|.-..|+|||......
T Consensus 1120 e~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~ 1199 (1387)
T KOG1517|consen 1120 EQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQV 1199 (1387)
T ss_pred ccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEeccccee
Confidence 456777777 888999986655321 1111111112221 11114467887666777777788999999998876
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCc---EEEEeccCCcc--e
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGK---NLGILTEHKKF--V 237 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~--v 237 (621)
...+ ..+....|+++.-+- .|+.+++|..||.|++||.+... .+...+.|... |
T Consensus 1200 ~~di--------------------P~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~I 1259 (1387)
T KOG1517|consen 1200 VADI--------------------PYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPI 1259 (1387)
T ss_pred Eeec--------------------ccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccc
Confidence 5433 234555677776544 46899999999999999987543 45666788877 9
Q ss_pred EEEEEcCCCCE-EEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 238 QGVAWDPKNQY-VATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 238 ~~l~~sp~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
..+.+.+.|-. |++|+.+|.|++||++.......+... ..-...+..+++..+++...+|+
T Consensus 1260 v~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv------------------~~~~yGs~lTal~VH~hapiiAs 1321 (1387)
T KOG1517|consen 1260 VHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIV------------------AHWEYGSALTALTVHEHAPIIAS 1321 (1387)
T ss_pred eeEEeecCCCcceeeeccCCeEEEEecccCcccccceee------------------eccccCccceeeeeccCCCeeee
Confidence 99999987744 999999999999999874221111000 00001123567777777777776
Q ss_pred ccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEE
Q psy15549 317 PSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLY 396 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw 396 (621)
|+ . +. |.||
T Consensus 1322 Gs-----~-q~-----------------------------------------------------------------ikIy 1330 (1387)
T KOG1517|consen 1322 GS-----A-QL-----------------------------------------------------------------IKIY 1330 (1387)
T ss_pred cC-----c-ce-----------------------------------------------------------------EEEE
Confidence 65 2 34 4444
Q ss_pred eCCCCceeEE-----EecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcC
Q psy15549 397 DTQHASPFAF-----IANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 397 d~~~~~~~~~-----~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~ 446 (621)
++...+.-.. +.......+.|++|+|-.-.||+|+.|.+|.||....+.+
T Consensus 1331 ~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~~ 1385 (1387)
T KOG1517|consen 1331 SLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPRL 1385 (1387)
T ss_pred ecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcCC
Confidence 4433221100 1112335679999999999999999999999999776543
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.9e-15 Score=132.64 Aligned_cols=238 Identities=17% Similarity=0.221 Sum_probs=176.5
Q ss_pred cCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC--CcEEEEEc
Q psy15549 81 QKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE--STIIVWKQ 158 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d--g~i~vwd~ 158 (621)
...+..+.|+.+...|..|+.++.++|....-+ + ..........|..+-|+. .++|..+.+ ..++++++
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~Gyk~~~~~~~~------k-~~~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~ 75 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDGYKIFSCSPFE------K-CFSKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHF 75 (391)
T ss_pred CcceeeeeeccceeEEEccCCCceeEEecCchH------H-hhcccCCCeEEEEeeccc--ceeEEEecCCCceEEEEEc
Confidence 345777789999999999999999999987653 1 111111223466666764 456655544 35888888
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc---CCc
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE---HKK 235 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~---~~~ 235 (621)
..+..+..+ .....|.++.++.+ +|+++-.+. |+|||+++.+.+.++.. +..
T Consensus 76 Kk~~~ICe~----------------------~fpt~IL~VrmNr~--RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~ 130 (391)
T KOG2110|consen 76 KKKTTICEI----------------------FFPTSILAVRMNRK--RLVVCLEES-IYIYDIKDMKLLHTIETTPPNPK 130 (391)
T ss_pred ccCceEEEE----------------------ecCCceEEEEEccc--eEEEEEccc-EEEEecccceeehhhhccCCCcc
Confidence 776644221 34567889998754 677666554 99999999999888753 445
Q ss_pred ceEEEEEcCCCCEEEEEe--CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 236 FVQGVAWDPKNQYVATLS--SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
.+.++++++.+.+|+.-+ ..|.|.+||+.+.+.+..+. .|++.+.+++|+++|.+
T Consensus 131 gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~-----------------------aH~~~lAalafs~~G~l 187 (391)
T KOG2110|consen 131 GLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTIN-----------------------AHKGPLAALAFSPDGTL 187 (391)
T ss_pred ceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEE-----------------------ecCCceeEEEECCCCCE
Confidence 566666666777888543 35899999999988877775 44566789999999999
Q ss_pred EEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC-c
Q psy15549 314 LIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN-N 392 (621)
Q Consensus 314 l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~ 392 (621)
||+++ +.| .
T Consensus 188 lATAS----------------------------------------------------------------------eKGTV 197 (391)
T KOG2110|consen 188 LATAS----------------------------------------------------------------------EKGTV 197 (391)
T ss_pred EEEec----------------------------------------------------------------------cCceE
Confidence 99987 233 5
Q ss_pred EEEEeCCCCceeEEEeccc-ccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 393 ILLYDTQHASPFAFIANIH-YTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 393 i~iwd~~~~~~~~~~~~~h-~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
|++|.+.+|+.+..+..|- ...|.+++|+||+++|++.|..++|.||.++...
T Consensus 198 IRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 198 IRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred EEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecccc
Confidence 7899999999888886643 3468999999999999999999999999998655
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.1e-16 Score=147.07 Aligned_cols=314 Identities=16% Similarity=0.203 Sum_probs=217.9
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
...+-.|.+-|..|.|+..|. .|++|+.|..|. +||+..+..... -..+|...|.
T Consensus 135 ~~kL~~H~GcVntV~FN~~Gd-----~l~SgSDD~~vv--------------~WdW~~~~~~l~------f~SGH~~Nvf 189 (559)
T KOG1334|consen 135 QKKLNKHKGCVNTVHFNQRGD-----VLASGSDDLQVV--------------VWDWVSGSPKLS------FESGHCNNVF 189 (559)
T ss_pred hhcccCCCCccceeeecccCc-----eeeccCccceEE--------------eehhhccCcccc------cccccccchh
Confidence 345667999999999999998 999999999999 888887654322 3478988898
Q ss_pred EEEEccC--CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCC-CEEEEEeCCCcEEEEEccCC
Q psy15549 86 VVRFSPN--GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 86 ~l~~spd--g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg~i~vwd~~~~ 161 (621)
...|-|. .+.|++++ |+.|++=.+...+. +.....+..|.+.|..++.-|+. .-|.+++.|+.+.-+|++..
T Consensus 190 QaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~----~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~ 265 (559)
T KOG1334|consen 190 QAKFIPFSGDRTIVTSSRDGQVRVSEILETGY----VENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQD 265 (559)
T ss_pred hhhccCCCCCcCceeccccCceeeeeeccccc----eecceecccccCccceeeecCCCCCcccccccccceeeeeeccC
Confidence 8888873 35566655 99998877665432 13355677899999999999854 57889999999999999888
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCC---CeEEEEECCCC-CEEEEEeCCCeEEEEECCCCcE------EEEec
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLE---DVYDISWSPTS-THLISGSVDNTAIMWDVHKGKN------LGILT 231 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~~~------~~~~~ 231 (621)
.....+ .....+.. ....++..|.. ..+++|+.|..+++||.+.-.. +..+.
T Consensus 266 ~pa~~~------------------~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~ 327 (559)
T KOG1334|consen 266 VPAEKF------------------VCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFC 327 (559)
T ss_pred Ccccee------------------eeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcC
Confidence 764433 12223333 56788999955 4899999999999999875322 22222
Q ss_pred ------cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeee
Q psy15549 232 ------EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL 305 (621)
Q Consensus 232 ------~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 305 (621)
.....|++++|+.++.-|++.-.|-.|+++.-..+.- .. +.
T Consensus 328 p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G-~~------p~-------------------------- 374 (559)
T KOG1334|consen 328 PHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDG-SE------PD-------------------------- 374 (559)
T ss_pred CccccccCcccceeEEecCCccceeeeecccceEEeccccccC-CC------CC--------------------------
Confidence 2234689999998887777777888889884322211 00 00
Q ss_pred eecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCccc--ceeeeeccceeeecCCCCCCCCccCCCcE
Q psy15549 306 TFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQY--YSVAVKCCPVLFELKPSDDKPLFKLPYRI 383 (621)
Q Consensus 306 ~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (621)
..+|...++=- ...+|.. .+..+.| |.+...+
T Consensus 375 ~~s~~~~~~k~-------------------------------vYKGHrN~~TVKgVNF---------------fGPrsEy 408 (559)
T KOG1334|consen 375 PSSPREQYVKR-------------------------------VYKGHRNSRTVKGVNF---------------FGPRSEY 408 (559)
T ss_pred CCcchhhccch-------------------------------hhcccccccccceeee---------------ccCccce
Confidence 00000000000 0001110 1111111 1224477
Q ss_pred EEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcC
Q psy15549 384 VIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 384 l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~ 446 (621)
+++|+.-|.|.||+-.+++.+..+.. ...-|+|+.=+|--..||+++-|..|+||.-.+.+.
T Consensus 409 VvSGSDCGhIFiW~K~t~eii~~Meg-Dr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er 470 (559)
T KOG1334|consen 409 VVSGSDCGHIFIWDKKTGEIIRFMEG-DRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAER 470 (559)
T ss_pred EEecCccceEEEEecchhHHHHHhhc-ccceEeccCCCCCCchhhccCCccceeeecCCcccc
Confidence 88888899999999999999888854 444899999999999999999999999999765543
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.6e-15 Score=154.29 Aligned_cols=209 Identities=15% Similarity=0.181 Sum_probs=142.7
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCC---ceEEeeeccCccccccceeEEeccccccccceeeccccccccC
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGAD---SHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK 82 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~d---g~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~ 82 (621)
++.+..|...+.+.+|||||+ +|++.+.+ ..|. +||+.++.... +..+.+|
T Consensus 196 ~~~lt~~~~~v~~p~wSPDG~-----~la~~s~~~~~~~i~--------------i~dl~tg~~~~-----l~~~~g~-- 249 (429)
T PRK01742 196 QFIVNRSSQPLMSPAWSPDGS-----KLAYVSFENKKSQLV--------------VHDLRSGARKV-----VASFRGH-- 249 (429)
T ss_pred ceEeccCCCccccceEcCCCC-----EEEEEEecCCCcEEE--------------EEeCCCCceEE-----EecCCCc--
Confidence 344556777899999999998 88877543 3566 89887654211 1223343
Q ss_pred cEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcc
Q psy15549 83 AVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTIIVWKQK 159 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~vwd~~ 159 (621)
..+++|+|||+.|+.+. ++.+.||.+.... .....+..+...+..+.|+|||+.|+.++ .+|...||++.
T Consensus 250 -~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~------~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~ 322 (429)
T PRK01742 250 -NGAPAFSPDGSRLAFASSKDGVLNIYVMGANG------GTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMS 322 (429)
T ss_pred -cCceeECCCCCEEEEEEecCCcEEEEEEECCC------CCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEE
Confidence 34689999999988764 6666677554322 12334556667788999999999877655 57888999876
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEE
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQG 239 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 239 (621)
...... ..+ .+.. .+..|+|||++|+.++.++ +.+||+.+++.......+ ....
T Consensus 323 ~~~~~~--------------------~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~ 376 (429)
T PRK01742 323 ASGGGA--------------------SLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--LDES 376 (429)
T ss_pred CCCCCe--------------------EEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC--CCCC
Confidence 543210 112 2333 4578999999998887765 566999888764333222 3356
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcc--Cceeeeecc
Q psy15549 240 VAWDPKNQYVATLSSDRSLRTYSIQ--SKKVISRAC 273 (621)
Q Consensus 240 l~~sp~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~ 273 (621)
+.|+|+|++|++++.++.+.+|++. ++.....+.
T Consensus 377 ~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~ 412 (429)
T PRK01742 377 PSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLP 412 (429)
T ss_pred ceECCCCCEEEEEEcCCCceEEEEEECCCCceEEcc
Confidence 8899999999999999988888763 455555553
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.4e-16 Score=133.03 Aligned_cols=293 Identities=14% Similarity=0.087 Sum_probs=188.1
Q ss_pred cccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceeccccc-ccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 75 SDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLS-RHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
..+++|.+.|+++.|..+++ |.+|. .+-|++|.+.+. .....+. .|...|+.+.-.|+ ..|.+-+.|+.
T Consensus 8 fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~-------r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~ 78 (323)
T KOG0322|consen 8 FVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTE-------RDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPL 78 (323)
T ss_pred eEeccccchheehhhccchh-hhcccccceEEEEEeecC-------ccchhhhhhccceeeceeecCC-cchhhcCCCce
Confidence 34679999999999999887 55555 888999999886 4444455 57788999999887 56888899999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-----CC----CEEEEEeCC-CeEEEEECC
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-----TS----THLISGSVD-NTAIMWDVH 222 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-----d~----~~l~s~~~d-g~i~vwd~~ 222 (621)
+.+|++.....+ ..|.-.+.++.|++ .+ ..++.-++. ..+.+-|..
T Consensus 79 L~lw~ia~s~~i------------------------~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g 134 (323)
T KOG0322|consen 79 LILWTIAYSAFI------------------------SIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGG 134 (323)
T ss_pred EEEEEccCcceE------------------------EEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccC
Confidence 999999875432 12333334444443 11 112221111 012233322
Q ss_pred CCcEEEEe----ccCCcceEEEEEcC-CCC--EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccccccccc
Q psy15549 223 KGKNLGIL----TEHKKFVQGVAWDP-KNQ--YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHD 295 (621)
Q Consensus 223 ~~~~~~~~----~~~~~~v~~l~~sp-~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (621)
....+... .+..+.+++..+.. ++. +|+.|-++|.+.+||+.++..+-.+..... -.+..
T Consensus 135 ~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~k-------------v~~~~ 201 (323)
T KOG0322|consen 135 DTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSK-------------VESPN 201 (323)
T ss_pred ccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccc-------------cccch
Confidence 22222221 12345677766433 333 355677899999999999865544431110 01112
Q ss_pred CCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCC
Q psy15549 296 DTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKP 375 (621)
Q Consensus 296 ~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (621)
..+...+.++.|.+.-..=+
T Consensus 202 ash~qpvlsldyas~~~rGi------------------------------------------------------------ 221 (323)
T KOG0322|consen 202 ASHKQPVLSLDYASSCDRGI------------------------------------------------------------ 221 (323)
T ss_pred hhccCcceeeeechhhcCCc------------------------------------------------------------
Confidence 23344445555543222111
Q ss_pred CccCCCcEEEEEEcCCcEEEEeCCCC--ce-eEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCC
Q psy15549 376 LFKLPYRIVIAVATENNILLYDTQHA--SP-FAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP 452 (621)
Q Consensus 376 ~~~~~~~~l~~~~~dg~i~iwd~~~~--~~-~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~ 452 (621)
.++.+..+..|++... .. +........-.|..+..-||++.|||++.||.||||+..+...+..++-
T Consensus 222 ----------sgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLky 291 (323)
T KOG0322|consen 222 ----------SGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKY 291 (323)
T ss_pred ----------CCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhh
Confidence 2233444555554432 11 1111111234688999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCCCcccCCCcccHHHhcc
Q psy15549 453 PSGEESKENDPTKGEPVRSEDKPRSAEQAKG 483 (621)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~ 483 (621)
|+..++.++|+++...++.++.|+.|-+|++
T Consensus 292 Hsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 292 HSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred hhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 9999999999999999999999999999975
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-14 Score=150.22 Aligned_cols=279 Identities=14% Similarity=0.145 Sum_probs=180.4
Q ss_pred eecCCCCeEEEeccccc-cCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQ-EKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~-~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
++.|...|..++.++.. . ++++|+.||+|+ +|+...-...........++.--.+.+.++
T Consensus 1044 L~Ehs~~v~k~a~s~~~~s-----~FvsgS~DGtVK--------------vW~~~k~~~~~~s~rS~ltys~~~sr~~~v 1104 (1431)
T KOG1240|consen 1044 LHEHSSAVIKLAVSSEHTS-----LFVSGSDDGTVK--------------VWNLRKLEGEGGSARSELTYSPEGSRVEKV 1104 (1431)
T ss_pred hhhccccccceeecCCCCc-----eEEEecCCceEE--------------EeeehhhhcCcceeeeeEEEeccCCceEEE
Confidence 34577788888888776 6 999999999999 777765433211122222333346789999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccC-CC-eEEEEECC-CCC-EEEEEeCCCcEEEEEccCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQ-KA-VNVVRFSP-NGE-LLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~-V~~i~~sp-~g~-~l~s~s~dg~i~vwd~~~~~ 162 (621)
.+.+.+..+|.++ ||.|++.++.............+....+. +. |..-+|.. .+. .|+.+..-+.|..||++...
T Consensus 1105 t~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~ 1184 (1431)
T KOG1240|consen 1105 TMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRH 1184 (1431)
T ss_pred EeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhh
Confidence 9999999999988 78888888876322111112222222222 22 33334443 333 77888888999999998876
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCcceEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT-EHKKFVQGVA 241 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~l~ 241 (621)
....+ ......+.|++++.+|-+++++.|+..|.+.+||++-+.++.... ++..+|+.+.
T Consensus 1185 ~~w~l-------------------k~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~ 1245 (1431)
T KOG1240|consen 1185 DAWRL-------------------KNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVW 1245 (1431)
T ss_pred hHHhh-------------------hcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEE
Confidence 55332 123345779999999999999999999999999999888877663 3456788887
Q ss_pred EcCC---CCEEEEEeC--CCcEEEEEccCceeeeecccCCCCCCCcccccccccccc-ccCCcccceeeeeecCCCCeEE
Q psy15549 242 WDPK---NQYVATLSS--DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLF-HDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 242 ~sp~---~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~spdg~~l~ 315 (621)
.+|- ....++++. .+.|.+|++.+|.....+........ .....+.- ...+..-......+..-+.+++
T Consensus 1246 ~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~-----ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~l 1320 (1431)
T KOG1240|consen 1246 LCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPI-----LSYALPSNDARKPDSLAGISCGVCEKNGFLL 1320 (1431)
T ss_pred eeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcc-----hhhhcccccCCCCCcccceeeecccCCceee
Confidence 7763 345555544 67899999999977666654411110 00111110 0001111223334444455667
Q ss_pred eccccccCCCCCCcceeeee
Q psy15549 316 APSGCLENSDSTRKPISVTH 335 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~ 335 (621)
+++ .|..++.||...
T Consensus 1321 tgg-----sd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1321 TGG-----SDMKIRKWDPTR 1335 (1431)
T ss_pred ecC-----CccceeeccCCC
Confidence 776 899999999764
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3e-14 Score=144.51 Aligned_cols=236 Identities=16% Similarity=0.162 Sum_probs=153.8
Q ss_pred ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe---CCCcEEEEEccCCCCCCCCCCCCcccccccc
Q psy15549 103 GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD---DESTIIVWKQKTDQDLPEFPSSNLDEENVNK 179 (621)
Q Consensus 103 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 179 (621)
.+.+||..... .+.+..+...+...+|+|||+.|+..+ .+..|.+|++.+++..
T Consensus 180 ~l~~~d~dg~~--------~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~--------------- 236 (429)
T PRK03629 180 ELRVSDYDGYN--------QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR--------------- 236 (429)
T ss_pred eEEEEcCCCCC--------CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeE---------------
Confidence 46666665431 233445667899999999999888754 2457999999877531
Q ss_pred cceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCC--eEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCC-
Q psy15549 180 EHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDN--TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSD- 255 (621)
Q Consensus 180 ~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg--~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~d- 255 (621)
.+......+..+.|+|||+.|+.. +.+| .|++||+.+++... +..+...+....|+|||+.|+..+.+
T Consensus 237 -------~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~ 308 (429)
T PRK03629 237 -------QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQA 308 (429)
T ss_pred -------EccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCC
Confidence 122223334568999999988865 4344 58999998887644 43445567889999999998877754
Q ss_pred CcEEEE--EccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceee
Q psy15549 256 RSLRTY--SIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISV 333 (621)
Q Consensus 256 g~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~ 333 (621)
+...|| |+.++... .+.. .........|+|||++|+..+. +
T Consensus 309 g~~~Iy~~d~~~g~~~-~lt~-----------------------~~~~~~~~~~SpDG~~Ia~~~~-----~-------- 351 (429)
T PRK03629 309 GRPQVYKVNINGGAPQ-RITW-----------------------EGSQNQDADVSSDGKFMVMVSS-----N-------- 351 (429)
T ss_pred CCceEEEEECCCCCeE-Eeec-----------------------CCCCccCEEECCCCCEEEEEEc-----c--------
Confidence 444555 55554332 2210 0112346889999999887651 0
Q ss_pred eeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEeccccc
Q psy15549 334 THVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYT 413 (621)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~ 413 (621)
.....|++||+.+++.. .+... .
T Consensus 352 ------------------------------------------------------~g~~~I~~~dl~~g~~~-~Lt~~--~ 374 (429)
T PRK03629 352 ------------------------------------------------------GGQQHIAKQDLATGGVQ-VLTDT--F 374 (429)
T ss_pred ------------------------------------------------------CCCceEEEEECCCCCeE-EeCCC--C
Confidence 01235778888877643 33222 2
Q ss_pred ceEEEEEcCCCCeEEEEeCCCc---EEEEEecCCcCCcccCCCCCcccccCCCC
Q psy15549 414 KLTDITWSSDGKVLIASSTDGY---CSIISFGDNEIGIPYVPPSGEESKENDPT 464 (621)
Q Consensus 414 ~v~~~~~spdg~~l~s~s~dg~---i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (621)
......|+|||++|+.++.++. +.++++ +|...+.+..+.+.+....|+|
T Consensus 375 ~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 375 LDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred CCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcCCcccCC
Confidence 2346789999999999988765 566666 4555566766666777777765
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=9e-15 Score=132.33 Aligned_cols=197 Identities=16% Similarity=0.236 Sum_probs=135.1
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcc
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWKQK 159 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd~~ 159 (621)
-.+..++|++--.-+|++. |+.|++|+-.... ....-......|++++|-|. ++.|+.|...| |++|...
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~ksst~-------pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s 170 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSSTC-------PTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDS 170 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCCCC-------CceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcC
Confidence 4578899998555556655 8899999877631 11111224567999999994 45777777654 9999865
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEEEeccCCcceE
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLGILTEHKKFVQ 238 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~v~ 238 (621)
.......... .............+| ..|+++.|.+||..+++++. |..|.|||..++..+.......+.++
T Consensus 171 ~tln~~r~~~-------~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~s 242 (445)
T KOG2139|consen 171 RTLNANRNIR-------MMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFS 242 (445)
T ss_pred cccccccccc-------cccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCcee
Confidence 4332211000 000000011223455 78999999999999999886 57899999999988766655567788
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccC-ceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQS-KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
-+.|||||.+|+.++-|+..++|.... ....+-. -..+.|...+|+|+|++|+.+
T Consensus 243 lLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~------------------------lgsgrvqtacWspcGsfLLf~ 298 (445)
T KOG2139|consen 243 LLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWI------------------------LGSGRVQTACWSPCGSFLLFA 298 (445)
T ss_pred eEEEcCCCCEEEEecccceeeeehhcccceeccee------------------------ccCCceeeeeecCCCCEEEEE
Confidence 999999999999999999999995433 2222211 112367899999999988776
Q ss_pred c
Q psy15549 318 S 318 (621)
Q Consensus 318 s 318 (621)
.
T Consensus 299 ~ 299 (445)
T KOG2139|consen 299 C 299 (445)
T ss_pred E
Confidence 5
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.9e-14 Score=136.66 Aligned_cols=186 Identities=15% Similarity=0.182 Sum_probs=147.9
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
-.-.|.+.|.|-.|+|||. -|++++.||.|+ ||.-...- ..++-....+|+|+
T Consensus 99 sv~AH~~A~~~gRW~~dGt-----gLlt~GEDG~iK--------------iWSrsGML--------RStl~Q~~~~v~c~ 151 (737)
T KOG1524|consen 99 SISAHAAAISSGRWSPDGA-----GLLTAGEDGVIK--------------IWSRSGML--------RSTVVQNEESIRCA 151 (737)
T ss_pred hhhhhhhhhhhcccCCCCc-----eeeeecCCceEE--------------EEeccchH--------HHHHhhcCceeEEE
Confidence 3456888999999999998 999999999999 99865432 12355567899999
Q ss_pred EEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 88 RFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 88 ~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
+|.|+..-++.+..+.+.|=-+... ..+.....|.+-|.++.|++..+++++|++|-..+|||......
T Consensus 152 ~W~p~S~~vl~c~g~h~~IKpL~~n-------~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~L---- 220 (737)
T KOG1524|consen 152 RWAPNSNSIVFCQGGHISIKPLAAN-------SKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANL---- 220 (737)
T ss_pred EECCCCCceEEecCCeEEEeecccc-------cceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCccc----
Confidence 9999998888888777777666654 34556788999999999999999999999999999999765543
Q ss_pred CCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC
Q psy15549 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247 (621)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~ 247 (621)
.....|.-+|++++|+|+ +.++.++. ++++ .-+...+.|..++||+||.
T Consensus 221 ------------------f~S~~~ey~ITSva~npd-~~~~v~S~-nt~R-----------~~~p~~GSifnlsWS~DGT 269 (737)
T KOG1524|consen 221 ------------------FTSAAEEYAITSVAFNPE-KDYLLWSY-NTAR-----------FSSPRVGSIFNLSWSADGT 269 (737)
T ss_pred ------------------ccCChhccceeeeeeccc-cceeeeee-eeee-----------ecCCCccceEEEEEcCCCc
Confidence 233578899999999999 66777663 2333 1124567899999999999
Q ss_pred EEEEEeCCCcEEEEE
Q psy15549 248 YVATLSSDRSLRTYS 262 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd 262 (621)
.++.|+..|.+.+-.
T Consensus 270 Q~a~gt~~G~v~~A~ 284 (737)
T KOG1524|consen 270 QATCGTSTGQLIVAY 284 (737)
T ss_pred eeeccccCceEEEee
Confidence 999999998766543
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.6e-16 Score=145.01 Aligned_cols=202 Identities=16% Similarity=0.203 Sum_probs=170.1
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
+-+.+.|+.+|+ +|+.|+.-|.|. .+|+.++..... +. -...|.++.|-.+.+
T Consensus 131 GPY~~~ytrnGr-----hlllgGrKGHlA--------------a~Dw~t~~L~~E-------i~-v~Etv~Dv~~LHneq 183 (545)
T KOG1272|consen 131 GPYHLDYTRNGR-----HLLLGGRKGHLA--------------AFDWVTKKLHFE-------IN-VMETVRDVTFLHNEQ 183 (545)
T ss_pred CCeeeeecCCcc-----EEEecCCcccee--------------eeecccceeeee-------ee-hhhhhhhhhhhcchH
Confidence 456788999998 999999999999 777766654332 21 235688999999999
Q ss_pred EEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCccc
Q psy15549 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDE 174 (621)
Q Consensus 95 ~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 174 (621)
++|++-...+.|||-.. ..++-+..| ..|..+.|-|..-+|++++..|.++--|+.+++.+.
T Consensus 184 ~~AVAQK~y~yvYD~~G--------tElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa--------- 245 (545)
T KOG1272|consen 184 FFAVAQKKYVYVYDNNG--------TELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVA--------- 245 (545)
T ss_pred HHHhhhhceEEEecCCC--------cEEeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhH---------
Confidence 99999999999999765 335555555 468899999999899999999999999999999764
Q ss_pred ccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeC
Q psy15549 175 ENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS 254 (621)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~ 254 (621)
.+....+.+..++-+|-+-.+-+|...|+|.+|.....+++..+-.|.++|.++++.++|+|++|.+.
T Consensus 246 ------------~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~ 313 (545)
T KOG1272|consen 246 ------------SIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGL 313 (545)
T ss_pred ------------HHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeeccc
Confidence 34556678888999998889999999999999999999998888899999999999999999999999
Q ss_pred CCcEEEEEccCceeeeecc
Q psy15549 255 DRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 255 dg~i~iwd~~~~~~~~~~~ 273 (621)
|..++|||++....+.++.
T Consensus 314 Dr~~kIWDlR~~~ql~t~~ 332 (545)
T KOG1272|consen 314 DRKVKIWDLRNFYQLHTYR 332 (545)
T ss_pred ccceeEeeeccccccceee
Confidence 9999999999877555543
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.6e-14 Score=142.56 Aligned_cols=186 Identities=17% Similarity=0.219 Sum_probs=125.0
Q ss_pred cccccCcEEEEEEccCCCEEEEEc----CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEE-eCCC
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGD----DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG-DDES 151 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~----d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~-s~dg 151 (621)
+..+...+.+.+|||||+.|+..+ +..+.+|++..+.. ..+..+.+ .+..++|+|||+.|+.. +.+|
T Consensus 194 lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~-----~~l~~~~~---~~~~~~~SPDG~~La~~~~~~g 265 (429)
T PRK03629 194 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-----RQVASFPR---HNGAPAFSPDGSKLAFALSKTG 265 (429)
T ss_pred eecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCe-----EEccCCCC---CcCCeEECCCCCEEEEEEcCCC
Confidence 445667899999999999998754 33578888766521 22333333 34568999999988865 4444
Q ss_pred --cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-C--eEEEEECCCCcE
Q psy15549 152 --TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD-N--TAIMWDVHKGKN 226 (621)
Q Consensus 152 --~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d-g--~i~vwd~~~~~~ 226 (621)
.|.+||+.++.. ..+..+...+....|+|||+.|+..+.+ + .|+++|+.++..
T Consensus 266 ~~~I~~~d~~tg~~----------------------~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~ 323 (429)
T PRK03629 266 SLNLYVMDLASGQI----------------------RQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP 323 (429)
T ss_pred CcEEEEEECCCCCE----------------------EEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe
Confidence 588899887653 2333444567889999999988877754 4 455557766654
Q ss_pred EEEeccCCcceEEEEEcCCCCEEEEEeCC---CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCccccee
Q psy15549 227 LGILTEHKKFVQGVAWDPKNQYVATLSSD---RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303 (621)
Q Consensus 227 ~~~~~~~~~~v~~l~~sp~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 303 (621)
..+..+........|+|||++|+..+.+ ..|.+||+.++... .+... ....
T Consensus 324 -~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~------------------------~~~~ 377 (429)
T PRK03629 324 -QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT------------------------FLDE 377 (429)
T ss_pred -EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC------------------------CCCC
Confidence 3343344456678999999999876654 35888998877533 22110 0113
Q ss_pred eeeecCCCCeEEecc
Q psy15549 304 RLTFSPDGQLLIAPS 318 (621)
Q Consensus 304 ~~~~spdg~~l~~~s 318 (621)
...|+|||++|+.++
T Consensus 378 ~p~~SpDG~~i~~~s 392 (429)
T PRK03629 378 TPSIAPNGTMVIYSS 392 (429)
T ss_pred CceECCCCCEEEEEE
Confidence 578999999988776
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1e-13 Score=140.85 Aligned_cols=225 Identities=16% Similarity=0.197 Sum_probs=144.7
Q ss_pred ccccccCCCeEEEEECCCCCEEEEEeCC---CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEE
Q psy15549 123 SDLSRHQKAVNVVRFSPNGELLASGDDE---STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDIS 199 (621)
Q Consensus 123 ~~~~~h~~~V~~i~~sp~g~~l~s~s~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 199 (621)
..+..+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++. ..+....+.+.+..
T Consensus 189 ~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~----------------------~~l~~~~g~~~~~~ 246 (427)
T PRK02889 189 QSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRR----------------------RVVANFKGSNSAPA 246 (427)
T ss_pred eEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCE----------------------EEeecCCCCccceE
Confidence 3445677789999999999999887643 3599999988763 22233344567899
Q ss_pred ECCCCCEEEE-EeCCCeEEEEE--CCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeC-CCcEEEEEcc--Cceeeeecc
Q psy15549 200 WSPTSTHLIS-GSVDNTAIMWD--VHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS-DRSLRTYSIQ--SKKVISRAC 273 (621)
Q Consensus 200 ~spd~~~l~s-~~~dg~i~vwd--~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~-dg~i~iwd~~--~~~~~~~~~ 273 (621)
|+|||+.|+. .+.+|...||. +..+. ...+..+........|+|||++|+..+. +|...||.+. ++.......
T Consensus 247 ~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~ 325 (427)
T PRK02889 247 WSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTF 325 (427)
T ss_pred ECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEec
Confidence 9999998874 56677666654 44443 4556555555677899999999887664 4666666553 333211110
Q ss_pred cCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcc
Q psy15549 274 RSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQ 353 (621)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (621)
. .......+|||||++|+..+. +
T Consensus 326 -~-----------------------g~~~~~~~~SpDG~~Ia~~s~-----~---------------------------- 348 (427)
T PRK02889 326 -T-----------------------GSYNTSPRISPDGKLLAYISR-----V---------------------------- 348 (427)
T ss_pred -C-----------------------CCCcCceEECCCCCEEEEEEc-----c----------------------------
Confidence 0 011235789999999886551 0
Q ss_pred cceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCC
Q psy15549 354 YYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTD 433 (621)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~d 433 (621)
+....|++||+.+++..... . ........|+|||+.|+.++.+
T Consensus 349 ----------------------------------~g~~~I~v~d~~~g~~~~lt-~--~~~~~~p~~spdg~~l~~~~~~ 391 (427)
T PRK02889 349 ----------------------------------GGAFKLYVQDLATGQVTALT-D--TTRDESPSFAPNGRYILYATQQ 391 (427)
T ss_pred ----------------------------------CCcEEEEEEECCCCCeEEcc-C--CCCccCceECCCCCEEEEEEec
Confidence 01236888998887654322 2 2234678999999998887754
Q ss_pred C-c--EEEEEecCCcCCcccCCCCCcccccCCCCC
Q psy15549 434 G-Y--CSIISFGDNEIGIPYVPPSGEESKENDPTK 465 (621)
Q Consensus 434 g-~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (621)
+ . +.+.++ ++.....+..+.+.+....++|.
T Consensus 392 ~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~wsp~ 425 (427)
T PRK02889 392 GGRSVLAAVSS-DGRIKQRLSVQGGDVREPSWGPF 425 (427)
T ss_pred CCCEEEEEEEC-CCCceEEeecCCCCCCCCccCCC
Confidence 4 3 444444 45555666666666666666553
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-12 Score=124.40 Aligned_cols=315 Identities=14% Similarity=0.160 Sum_probs=197.3
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
.++...++|++|+ ++|.+. +..+. |++....... +......++++.|||-|
T Consensus 35 ~~~~v~~~S~~G~-----lfA~~~-~~~v~--------------i~~~~~~~~~---------lt~~~~~~~~L~fSP~g 85 (566)
T KOG2315|consen 35 RPCNVFAYSNNGR-----LFAYSD-NQVVK--------------VFEIATLKVV---------LCVELKKTYDLLFSPKG 85 (566)
T ss_pred CcceeEEEcCCCc-----EEEEEc-CCeEE--------------EEEccCCcEE---------EEeccceeeeeeecccc
Confidence 3577889999996 666555 55677 6665554311 11112268999999999
Q ss_pred CEEEEE-----------cCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 94 ELLASG-----------DDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 94 ~~las~-----------~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
.+|.+= +.-.+.+|++.++ .....+......-++..|++|..+.|- -..+.+.+|++.+.+
T Consensus 86 ~yL~T~e~~~i~~~~~~~~pn~~v~~vet~-------~~~s~~q~k~Q~~W~~qfs~dEsl~ar-lv~nev~f~~~~~f~ 157 (566)
T KOG2315|consen 86 NYLLTWEPWAIYGPKNASNPNVLVYNVETG-------VQRSQIQKKMQNGWVPQFSIDESLAAR-LVSNEVQFYDLGSFK 157 (566)
T ss_pred cccccccccccccCCCCCCCceeeeeeccc-------eehhheehhhhcCcccccccchhhhhh-hhcceEEEEecCCcc
Confidence 998752 1234689999874 223333332223368899988764332 224579999988744
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC--CEEEE-----EeCCCeEEEEECCCCcEE-----EEe
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS--THLIS-----GSVDNTAIMWDVHKGKNL-----GIL 230 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~--~~l~s-----~~~dg~i~vwd~~~~~~~-----~~~ 230 (621)
.. ...-|...|..+.+||.+ .++|+ .+.-+.|+||........ ++|
T Consensus 158 ~~----------------------~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksF 215 (566)
T KOG2315|consen 158 TI----------------------QHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSF 215 (566)
T ss_pred ce----------------------eeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccc
Confidence 22 223467789999999864 34443 345678999987522211 112
Q ss_pred ccCCcceEEEEEcCCCCEEE-EEeC--C---------CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCc
Q psy15549 231 TEHKKFVQGVAWDPKNQYVA-TLSS--D---------RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298 (621)
Q Consensus 231 ~~~~~~v~~l~~sp~~~~l~-s~~~--d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (621)
- ...-..+.|++-|.-|+ .++. | .+++++++........+ .-
T Consensus 216 F--kadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L------------------------~k 269 (566)
T KOG2315|consen 216 F--KADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPL------------------------LK 269 (566)
T ss_pred c--ccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEec------------------------CC
Confidence 1 11223578888775433 2222 2 35777777633333333 22
Q ss_pred ccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCcc
Q psy15549 299 KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFK 378 (621)
Q Consensus 299 ~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (621)
.++|+++.|+|+|+-++++.|- .-..+.++++ .+.|+.--.....+...|+
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGf---MPAkvtifnl--------------------------r~~~v~df~egpRN~~~fn 320 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGF---MPAKVTIFNL--------------------------RGKPVFDFPEGPRNTAFFN 320 (566)
T ss_pred CCCceEEEECCCCCEEEEEEec---ccceEEEEcC--------------------------CCCEeEeCCCCCccceEEC
Confidence 5678999999999988887753 2333333333 2333222222333344555
Q ss_pred CCCcEEEEEEcC---CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEe------CCCcEEEEEecCCc
Q psy15549 379 LPYRIVIAVATE---NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASS------TDGYCSIISFGDNE 445 (621)
Q Consensus 379 ~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s------~dg~i~iw~~~~~~ 445 (621)
+.|++++.+|-+ |.|-|||+.+.+.+..+. ...-+-+.|+|||++|+|+. .|+.++||++....
T Consensus 321 p~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~---a~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~ 393 (566)
T KOG2315|consen 321 PHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFK---AANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSL 393 (566)
T ss_pred CCCCEEEEeecCCCCCceEEEeccchhhccccc---cCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCce
Confidence 688888888754 799999999988887773 34566789999999999987 37889999987543
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=136.81 Aligned_cols=226 Identities=15% Similarity=0.169 Sum_probs=150.8
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEE-----CCCCCEEEEEeCCCcEEEEE
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRF-----SPNGELLASGDDESTIIVWK 157 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~-----sp~g~~l~s~s~dg~i~vwd 157 (621)
.+....++-.|.+|...-...+.+|+...+...... ..+.+.... ..+|-+| .|.+--|+.|-.-|.|.+.|
T Consensus 125 ~~~~~~~~~~gd~lcFnvg~~lyv~~~~g~~~~~~p--i~k~~y~gt-~P~cHdfn~~~a~~~g~dllIGf~tGqvq~id 201 (636)
T KOG2394|consen 125 IVTNTNQSGKGDRLCFNVGRELYVYSYRGAADLSKP--IDKREYKGT-SPTCHDFNSFTATPKGLDLLIGFTTGQVQLID 201 (636)
T ss_pred ceeeccccCCCCEEEEecCCeEEEEEccCcchhccc--hhhhcccCC-CCceecccccccCCCCcceEEeeccCceEEec
Confidence 345555666778888777777889988753221111 111111111 2223334 34566677888888999988
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCC-------------
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHK------------- 223 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~------------- 223 (621)
....+....+. ....-....|+|+.|-|.+ ..++++-.+|.+++||..-
T Consensus 202 p~~~~~sklfn-----------------e~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k 264 (636)
T KOG2394|consen 202 PINFEVSKLFN-----------------EERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALK 264 (636)
T ss_pred chhhHHHHhhh-----------------hcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccC
Confidence 76632211110 1111234789999999944 5666777899999997631
Q ss_pred -Cc--------------EEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccc
Q psy15549 224 -GK--------------NLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDK 288 (621)
Q Consensus 224 -~~--------------~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (621)
+. ++..+.--.+.|..++|+|||++||+.+.||.+||||+.+.+++..+.
T Consensus 265 ~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mk--------------- 329 (636)
T KOG2394|consen 265 DGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMK--------------- 329 (636)
T ss_pred CCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHH---------------
Confidence 11 111111123568899999999999999999999999999877654432
Q ss_pred cccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccc
Q psy15549 289 VVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCP 363 (621)
Q Consensus 289 ~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (621)
..-+...|++|||||+||++++ .|.-+.+|.+.. .+.+..-.+|+.+|..++|.|
T Consensus 330 --------SYFGGLLCvcWSPDGKyIvtGG-----EDDLVtVwSf~e-------rRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 330 --------SYFGGLLCVCWSPDGKYIVTGG-----EDDLVTVWSFEE-------RRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred --------hhccceEEEEEcCCccEEEecC-----CcceEEEEEecc-------ceEEEeccccccceeeEeecc
Confidence 1123458999999999999999 899999998764 234445678999999999987
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.8e-14 Score=142.70 Aligned_cols=236 Identities=17% Similarity=0.172 Sum_probs=152.9
Q ss_pred ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC---CcEEEEEccCCCCCCCCCCCCcccccccc
Q psy15549 103 GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE---STIIVWKQKTDQDLPEFPSSNLDEENVNK 179 (621)
Q Consensus 103 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 179 (621)
.+.+||.... ..+.+..+...+.+.+|+|||+.|+..+.+ ..|.+||+.++..
T Consensus 185 ~l~i~D~~g~--------~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~---------------- 240 (433)
T PRK04922 185 ALQVADSDGY--------NPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQR---------------- 240 (433)
T ss_pred EEEEECCCCC--------CceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCE----------------
Confidence 3667776432 233455677789999999999999987643 4699999987753
Q ss_pred cceeeeeeecCCCCCeEEEEECCCCCEEEE-EeCCC--eEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeC-C
Q psy15549 180 EHWIVTKILRGHLEDVYDISWSPTSTHLIS-GSVDN--TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS-D 255 (621)
Q Consensus 180 ~~~~~~~~~~~~~~~v~~i~~spd~~~l~s-~~~dg--~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~-d 255 (621)
..+....+...++.|+|||+.|+. .+.+| .|++||+.+++. ..+..+......++|+|||++|+..+. +
T Consensus 241 ------~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~ 313 (433)
T PRK04922 241 ------ELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRG 313 (433)
T ss_pred ------EEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCC
Confidence 222333444567899999987764 45555 699999988765 445555555677899999999887764 4
Q ss_pred Cc--EEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceee
Q psy15549 256 RS--LRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISV 333 (621)
Q Consensus 256 g~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~ 333 (621)
|. |.++++.+++...... . ......++|+|||++|+..+. +
T Consensus 314 g~~~iy~~dl~~g~~~~lt~-~-----------------------g~~~~~~~~SpDG~~Ia~~~~-----~-------- 356 (433)
T PRK04922 314 GRPQIYRVAASGGSAERLTF-Q-----------------------GNYNARASVSPDGKKIAMVHG-----S-------- 356 (433)
T ss_pred CCceEEEEECCCCCeEEeec-C-----------------------CCCccCEEECCCCCEEEEEEC-----C--------
Confidence 44 6666666654322111 0 011246899999999887551 0
Q ss_pred eeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEeccccc
Q psy15549 334 THVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYT 413 (621)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~ 413 (621)
+....|++||+.+++.. .+. +..
T Consensus 357 ------------------------------------------------------~~~~~I~v~d~~~g~~~-~Lt--~~~ 379 (433)
T PRK04922 357 ------------------------------------------------------GGQYRIAVMDLSTGSVR-TLT--PGS 379 (433)
T ss_pred ------------------------------------------------------CCceeEEEEECCCCCeE-ECC--CCC
Confidence 01236888998877654 332 223
Q ss_pred ceEEEEEcCCCCeEEEEeCC---CcEEEEEecCCcCCcccCCCCCcccccCCCC
Q psy15549 414 KLTDITWSSDGKVLIASSTD---GYCSIISFGDNEIGIPYVPPSGEESKENDPT 464 (621)
Q Consensus 414 ~v~~~~~spdg~~l~s~s~d---g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (621)
......|+|||++|+..+.+ +.|.++++. +...+.+..+.+.+....++|
T Consensus 380 ~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 380 LDESPSFAPNGSMVLYATREGGRGVLAAVSTD-GRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred CCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEEcccCCCCCCCCccCC
Confidence 45577999999988877653 357777764 444455555445555555543
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.7e-15 Score=138.77 Aligned_cols=143 Identities=17% Similarity=0.354 Sum_probs=111.9
Q ss_pred cCcEEEEEEccC--CCEEEEEcCCceEEEEeccCcccc---------------------ccceecccccccCCCeEEEEE
Q psy15549 81 QKAVNVVRFSPN--GELLASGDDVGKEIWYLTERESGI---------------------ANVEFASDLSRHQKAVNVVRF 137 (621)
Q Consensus 81 ~~~V~~l~~spd--g~~las~~d~~v~iw~~~~~~~~~---------------------~~~~~~~~~~~h~~~V~~i~~ 137 (621)
+..|+|+.|-|. +.+|++=.++.+.+|+........ ..-.++..+.-..+.|+.++|
T Consensus 219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F 298 (636)
T KOG2394|consen 219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF 298 (636)
T ss_pred ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence 478999999984 445555558888888764321100 000122223334568999999
Q ss_pred CCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEE
Q psy15549 138 SPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAI 217 (621)
Q Consensus 138 sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~ 217 (621)
+|||++||+.+.||.+||+|..+.+.+ ...+.--+...|++|||||++|++|++|..|.
T Consensus 299 S~DG~~LA~VSqDGfLRvF~fdt~eLl---------------------g~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVt 357 (636)
T KOG2394|consen 299 SPDGKYLATVSQDGFLRIFDFDTQELL---------------------GVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVT 357 (636)
T ss_pred cCCCceEEEEecCceEEEeeccHHHHH---------------------HHHHhhccceEEEEEcCCccEEEecCCcceEE
Confidence 999999999999999999999998765 23344456799999999999999999999999
Q ss_pred EEECCCCcEEEEeccCCcceEEEEEcC
Q psy15549 218 MWDVHKGKNLGILTEHKKFVQGVAWDP 244 (621)
Q Consensus 218 vwd~~~~~~~~~~~~~~~~v~~l~~sp 244 (621)
||.+..++.+..-.+|...|..++|.|
T Consensus 358 VwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 358 VWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred EEEeccceEEEeccccccceeeEeecc
Confidence 999999999999999999999999983
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.3e-13 Score=137.89 Aligned_cols=224 Identities=14% Similarity=0.170 Sum_probs=146.8
Q ss_pred cccccccCCCeEEEEECCCCCEEEEEeC---CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEE
Q psy15549 122 ASDLSRHQKAVNVVRFSPNGELLASGDD---ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198 (621)
Q Consensus 122 ~~~~~~h~~~V~~i~~sp~g~~l~s~s~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 198 (621)
...+..|...+.+.+|+|||+.|+..+. +..|.+||+.++.. ..+..+.+.+...
T Consensus 194 ~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~----------------------~~l~~~~g~~~~~ 251 (435)
T PRK05137 194 VRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR----------------------ELVGNFPGMTFAP 251 (435)
T ss_pred cEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE----------------------EEeecCCCcccCc
Confidence 3445677889999999999999888763 46899999987753 3344556677889
Q ss_pred EECCCCCEEE-EEeCCC--eEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeC-CC--cEEEEEccCceeeeec
Q psy15549 199 SWSPTSTHLI-SGSVDN--TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS-DR--SLRTYSIQSKKVISRA 272 (621)
Q Consensus 199 ~~spd~~~l~-s~~~dg--~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~ 272 (621)
+|+|||+.|+ +.+.++ .|++||+.++.. ..+..+........|+|||++|+..+. +| .|.+||+.++.... +
T Consensus 252 ~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-l 329 (435)
T PRK05137 252 RFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-I 329 (435)
T ss_pred EECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-e
Confidence 9999998876 445555 477889887765 445556666778999999999887764 33 57778876654322 2
Q ss_pred ccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCc
Q psy15549 273 CRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSL 352 (621)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~ 352 (621)
.. ....+....|+|||++|+.... +
T Consensus 330 t~-----------------------~~~~~~~~~~SpdG~~ia~~~~-----~--------------------------- 354 (435)
T PRK05137 330 SF-----------------------GGGRYSTPVWSPRGDLIAFTKQ-----G--------------------------- 354 (435)
T ss_pred ec-----------------------CCCcccCeEECCCCCEEEEEEc-----C---------------------------
Confidence 10 0122356789999999987551 0
Q ss_pred ccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeC
Q psy15549 353 QYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASST 432 (621)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~ 432 (621)
..+..|.+||+..+.. ..+.. ...+..+.|+|||+.|+..+.
T Consensus 355 -----------------------------------~~~~~i~~~d~~~~~~-~~lt~--~~~~~~p~~spDG~~i~~~~~ 396 (435)
T PRK05137 355 -----------------------------------GGQFSIGVMKPDGSGE-RILTS--GFLVEGPTWAPNGRVIMFFRQ 396 (435)
T ss_pred -----------------------------------CCceEEEEEECCCCce-EeccC--CCCCCCCeECCCCCEEEEEEc
Confidence 0123567777755442 33322 234678899999998887654
Q ss_pred C------CcEEEEEecCCcCCcccCCCCCcccccCCCC
Q psy15549 433 D------GYCSIISFGDNEIGIPYVPPSGEESKENDPT 464 (621)
Q Consensus 433 d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (621)
+ ..+.++++..+.. ..+.. .+......|+|
T Consensus 397 ~~~~~~~~~L~~~dl~g~~~-~~l~~-~~~~~~p~Wsp 432 (435)
T PRK05137 397 TPGSGGAPKLYTVDLTGRNE-REVPT-PGDASDPAWSP 432 (435)
T ss_pred cCCCCCcceEEEEECCCCce-EEccC-CCCccCcccCC
Confidence 3 2467777765544 33332 22334444443
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.5e-13 Score=141.40 Aligned_cols=189 Identities=16% Similarity=0.166 Sum_probs=137.0
Q ss_pred eeeccccccccCcEEEEEEccCC-CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe
Q psy15549 71 VEFASDLSRHQKAVNVVRFSPNG-ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD 148 (621)
Q Consensus 71 ~~~~~~~~~h~~~V~~l~~spdg-~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s 148 (621)
..+++.+..|...|..++.++.. .++++|+ ||.|++|+...-...........++......+.++...+.++.+|+++
T Consensus 1038 G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t 1117 (1431)
T KOG1240|consen 1038 GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVST 1117 (1431)
T ss_pred ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEc
Confidence 34567788999999999988755 9999998 888999999876544333344444444567899999999999999999
Q ss_pred CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeec--CCCCCeEEEEECC-CCC-EEEEEeCCCeEEEEECCCC
Q psy15549 149 DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR--GHLEDVYDISWSP-TST-HLISGSVDNTAIMWDVHKG 224 (621)
Q Consensus 149 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~i~~sp-d~~-~l~s~~~dg~i~vwd~~~~ 224 (621)
.||.|++.+++........ ....+... .....|..-+|.. .+. .|+.+..-+.|..||++..
T Consensus 1118 ~DG~v~~~~id~~~~~~~~--------------~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~ 1183 (1431)
T KOG1240|consen 1118 KDGSVRVLRIDHYNVSKRV--------------ATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMR 1183 (1431)
T ss_pred CCCeEEEEEccccccccce--------------eeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhh
Confidence 9999999998874211110 00011111 1222333334433 233 6778888899999999877
Q ss_pred cEEEEec--cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 225 KNLGILT--EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 225 ~~~~~~~--~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
....+++ ...+.|++++.+|.++++++|+..|.+.+||++-+..+..+.
T Consensus 1184 ~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~ 1234 (1431)
T KOG1240|consen 1184 HDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWE 1234 (1431)
T ss_pred hhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeeccc
Confidence 6655543 346789999999999999999999999999999887776653
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.4e-13 Score=130.11 Aligned_cols=336 Identities=14% Similarity=0.122 Sum_probs=187.0
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEec
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLT 110 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~ 110 (621)
++++-..+|.|. +.|..+.+... .+......-..+.|+|||+++.+++ |+.|.++|+.
T Consensus 8 ~~V~~~~~~~v~--------------viD~~t~~~~~-------~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~ 66 (369)
T PF02239_consen 8 FYVVERGSGSVA--------------VIDGATNKVVA-------RIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLA 66 (369)
T ss_dssp EEEEEGGGTEEE--------------EEETTT-SEEE-------EEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETT
T ss_pred EEEEecCCCEEE--------------EEECCCCeEEE-------EEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECC
Confidence 345666789998 77766554322 2443333334577999999988877 8899999999
Q ss_pred cCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeec
Q psy15549 111 ERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR 189 (621)
Q Consensus 111 ~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (621)
.. +.+..+.... ...++++++||++++++. ..+.+.++|..+.+.+..++... ....
T Consensus 67 ~~-------~~v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~--------------~~~~ 124 (369)
T PF02239_consen 67 TG-------KVVATIKVGG-NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGG--------------MPVD 124 (369)
T ss_dssp SS-------SEEEEEE-SS-EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--E--------------E-TT
T ss_pred cc-------cEEEEEecCC-CcceEEEcCCCCEEEEEecCCCceeEeccccccceeeccccc--------------cccc
Confidence 87 5555554443 467899999999988765 68899999999988764432110 0011
Q ss_pred CCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEE-EeccCCcceEEEEEcCCCCEEEEEe-CCCcEEEEEccCc
Q psy15549 190 GHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLG-ILTEHKKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQSK 266 (621)
Q Consensus 190 ~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~-~~~~~~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~ 266 (621)
.....+.++..+|....++..-. .+.|.+.|....+.+. .............|+|+++|++.+. .+..|-++|..++
T Consensus 125 ~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~ 204 (369)
T PF02239_consen 125 GPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTG 204 (369)
T ss_dssp TS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTT
T ss_pred ccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEeeccc
Confidence 14567888888998886665555 4889888987654432 2222345567889999999987654 4678999999999
Q ss_pred eeeeecccCCCCCCCccccccccccccccCCcccceeeeeec--CCCCeEEeccccccCCCCCCcceeeeeeeeecccCC
Q psy15549 267 KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS--PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNK 344 (621)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s--pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~ 344 (621)
+.+..+.....+-+... ... .|. -....|. ..+...+..- ....+.+|+... ..
T Consensus 205 k~v~~i~~g~~p~~~~~---------~~~-php--~~g~vw~~~~~~~~~~~~i-----g~~~v~v~d~~~-------wk 260 (369)
T PF02239_consen 205 KLVALIDTGKKPHPGPG---------ANF-PHP--GFGPVWATSGLGYFAIPLI-----GTDPVSVHDDYA-------WK 260 (369)
T ss_dssp EEEEEEE-SSSBEETTE---------EEE-EET--TTEEEEEEEBSSSSEEEEE-----E--TTT-STTTB-------TS
T ss_pred eEEEEeecccccccccc---------ccc-cCC--CcceEEeeccccceecccc-----cCCccccchhhc-------Ce
Confidence 88776643322211000 000 000 0111121 1222221111 112222222111 01
Q ss_pred CceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE----EcCCcEEEEeCCCCceeEEEecccccceEEEEE
Q psy15549 345 PAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV----ATENNILLYDTQHASPFAFIANIHYTKLTDITW 420 (621)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~ 420 (621)
....+...... ..+..+| +++++.+. ...+.|.++|..+.+.+..+..+-...+..+.|
T Consensus 261 vv~~I~~~G~g-lFi~thP----------------~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef 323 (369)
T PF02239_consen 261 VVKTIPTQGGG-LFIKTHP----------------DSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEF 323 (369)
T ss_dssp EEEEEE-SSSS---EE--T----------------T-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE
T ss_pred EEEEEECCCCc-ceeecCC----------------CCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEE
Confidence 11111111111 2222222 55677776 235799999999998777764333345999999
Q ss_pred cCCCCeEEEEeC--CCcEEEEEecCCcCCcccC
Q psy15549 421 SSDGKVLIASST--DGYCSIISFGDNEIGIPYV 451 (621)
Q Consensus 421 spdg~~l~s~s~--dg~i~iw~~~~~~~~~~~~ 451 (621)
++||+++..+.. +|.|.+||..+.++...++
T Consensus 324 ~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 324 NPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp -TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence 999997665543 3469999999998877765
|
... |
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.4e-13 Score=117.93 Aligned_cols=239 Identities=16% Similarity=0.190 Sum_probs=159.9
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
...+++|+.|.. .+++|..+| .+ ||+.+.-+.... ...+.+.+.-+..--..+
T Consensus 7 ~~lsvs~NQD~S-----cFava~~~G-fr--------------iyn~~P~ke~~~-------r~~~~~G~~~veMLfR~N 59 (346)
T KOG2111|consen 7 KTLSVSFNQDHS-----CFAVATDTG-FR--------------IYNCDPFKESAS-------RQFIDGGFKIVEMLFRSN 59 (346)
T ss_pred ceeEEEEccCCc-----eEEEEecCc-eE--------------EEecCchhhhhh-------hccccCchhhhhHhhhhc
Confidence 455699999997 888888777 45 666654222111 112222222222222344
Q ss_pred EEEE-Ec-C------CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC-CCCC
Q psy15549 95 LLAS-GD-D------VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD-QDLP 165 (621)
Q Consensus 95 ~las-~~-d------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~-~~~~ 165 (621)
+||. |+ . +.+.|||-... ..+..+ ....+|.++.+.++ .|++.- .+.|.||...+. +.+.
T Consensus 60 ~laLVGGg~~pky~pNkviIWDD~k~-------~~i~el-~f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~ 128 (346)
T KOG2111|consen 60 YLALVGGGSRPKYPPNKVIIWDDLKE-------RCIIEL-SFNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLH 128 (346)
T ss_pred eEEEecCCCCCCCCCceEEEEecccC-------cEEEEE-EeccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhhee
Confidence 5554 32 2 35899994332 333333 24568999999875 455554 468999998744 3332
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEE-EeCCCeEEEEECCCCcE--EEEeccCCcceEEEEE
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLIS-GSVDNTAIMWDVHKGKN--LGILTEHKKFVQGVAW 242 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s-~~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~l~~ 242 (621)
.+ .. ......+.+++-+.+..+||. |-.-|.|+|-|+...+. ...+.+|...|.|++.
T Consensus 129 ~~------------------et-~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~L 189 (346)
T KOG2111|consen 129 VI------------------ET-RSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVAL 189 (346)
T ss_pred ee------------------ec-ccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEE
Confidence 21 11 122333444444434455665 44469999999986655 4778899999999999
Q ss_pred cCCCCEEEEEeCCCc-EEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccc
Q psy15549 243 DPKNQYVATLSSDRS-LRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCL 321 (621)
Q Consensus 243 sp~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~ 321 (621)
+-+|..+|+++..|+ |||||..+|+.+.++.... ....|.+++|||++.+|++++
T Consensus 190 n~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~---------------------d~A~iy~iaFSp~~s~LavsS--- 245 (346)
T KOG2111|consen 190 NLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGV---------------------DRADIYCIAFSPNSSWLAVSS--- 245 (346)
T ss_pred cCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCC---------------------chheEEEEEeCCCccEEEEEc---
Confidence 999999999999997 8999999999999886433 234679999999999999999
Q ss_pred cCCCCCCcceeeeee
Q psy15549 322 ENSDSTRKPISVTHV 336 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~ 336 (621)
..+++.++.+...
T Consensus 246 --dKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 246 --DKGTLHIFSLRDT 258 (346)
T ss_pred --CCCeEEEEEeecC
Confidence 8899999988753
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-13 Score=123.19 Aligned_cols=153 Identities=20% Similarity=0.374 Sum_probs=109.8
Q ss_pred EEEEECCCCCEEEEEeC----------CCeEEEEECCC-CcEEEEecc-CCcceEEEEEcCCCCEEEEE--eCCCcEEEE
Q psy15549 196 YDISWSPTSTHLISGSV----------DNTAIMWDVHK-GKNLGILTE-HKKFVQGVAWDPKNQYVATL--SSDRSLRTY 261 (621)
Q Consensus 196 ~~i~~spd~~~l~s~~~----------dg~i~vwd~~~-~~~~~~~~~-~~~~v~~l~~sp~~~~l~s~--~~dg~i~iw 261 (621)
..+.|+++|.+|++-.. -|...+|.++. ...+..+.- ..++|.+++|+|+|+.|++. ..++.|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 46889999988776433 13455555532 233444432 34579999999999987655 356799999
Q ss_pred EccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecc
Q psy15549 262 SIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRAC 341 (621)
Q Consensus 262 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~ 341 (621)
|++ ++.+..+. ...+..+.|+|+|++|++++-
T Consensus 89 d~~-~~~i~~~~-------------------------~~~~n~i~wsP~G~~l~~~g~---------------------- 120 (194)
T PF08662_consen 89 DVK-GKKIFSFG-------------------------TQPRNTISWSPDGRFLVLAGF---------------------- 120 (194)
T ss_pred cCc-ccEeEeec-------------------------CCCceEEEECCCCCEEEEEEc----------------------
Confidence 996 44444442 123478999999999998761
Q ss_pred cCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEc
Q psy15549 342 LNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWS 421 (621)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~s 421 (621)
+...|.|.+||..+.+.+.... | ..++.++|+
T Consensus 121 ---------------------------------------------~n~~G~l~~wd~~~~~~i~~~~--~-~~~t~~~Ws 152 (194)
T PF08662_consen 121 ---------------------------------------------GNLNGDLEFWDVRKKKKISTFE--H-SDATDVEWS 152 (194)
T ss_pred ---------------------------------------------cCCCcEEEEEECCCCEEeeccc--c-CcEEEEEEc
Confidence 1134789999999888877663 3 357899999
Q ss_pred CCCCeEEEEeC------CCcEEEEEecCC
Q psy15549 422 SDGKVLIASST------DGYCSIISFGDN 444 (621)
Q Consensus 422 pdg~~l~s~s~------dg~i~iw~~~~~ 444 (621)
|||++|+++.. |+.++||++...
T Consensus 153 PdGr~~~ta~t~~r~~~dng~~Iw~~~G~ 181 (194)
T PF08662_consen 153 PDGRYLATATTSPRLRVDNGFKIWSFQGR 181 (194)
T ss_pred CCCCEEEEEEeccceeccccEEEEEecCe
Confidence 99999998863 789999999643
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-11 Score=116.58 Aligned_cols=340 Identities=17% Similarity=0.183 Sum_probs=217.1
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
.-++..++|||.|. +|++....|.. +|.-....... .-....|..+.|||.
T Consensus 32 ~~p~~~~~~SP~G~-----~l~~~~~~~V~---------------~~~g~~~~~l~---------~~~~~~V~~~~fSP~ 82 (561)
T COG5354 32 NWPVAYVSESPLGT-----YLFSEHAAGVE---------------CWGGPSKAKLV---------RFRHPDVKYLDFSPN 82 (561)
T ss_pred CcchhheeecCcch-----heehhhccceE---------------Eccccchhhee---------eeecCCceecccCcc
Confidence 34789999999998 88888877755 77655444221 112356999999999
Q ss_pred CCEEEEEc----------------CCceEEEEeccCccccccceecccccccCCC--eE-EEEECCCCCEEEEEeCCCcE
Q psy15549 93 GELLASGD----------------DVGKEIWYLTERESGIANVEFASDLSRHQKA--VN-VVRFSPNGELLASGDDESTI 153 (621)
Q Consensus 93 g~~las~~----------------d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~--V~-~i~~sp~g~~l~s~s~dg~i 153 (621)
++||.+=+ ++.+.+||+..+ ..+..+.+...+ .+ -+.|+.+.+|+|--. ...+
T Consensus 83 ~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg-------~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv-~~sl 154 (561)
T COG5354 83 EKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASG-------MIVFSFNGISQPYLGWPVLKFSIDDKYVARVV-GSSL 154 (561)
T ss_pred cceeeeeccCCccChhhccCCccccCceeEEeccCc-------eeEeeccccCCcccccceeeeeecchhhhhhc-cCeE
Confidence 99999743 335789999887 555555555444 55 688998888776553 3469
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC--CEEEE-----EeCCCeEEEEECCCCcE
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS--THLIS-----GSVDNTAIMWDVHKGKN 226 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~--~~l~s-----~~~dg~i~vwd~~~~~~ 226 (621)
.|+++ +.... ..+ ...+ ....|....|+|.+ ..|+. .+..+.+++|.+..+..
T Consensus 155 ~i~e~-t~n~~-~~p----------------~~~l--r~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~ 214 (561)
T COG5354 155 YIHEI-TDNIE-EHP----------------FKNL--RPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSV 214 (561)
T ss_pred EEEec-CCccc-cCc----------------hhhc--cccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCe
Confidence 99997 33321 000 0111 13568888999954 33443 45678999999987776
Q ss_pred EEEeccCCcceEEEEEcCCCCEEEEEeC-----------CCcEEEEEccCceeeeecccCCCCCCCcccccccccccccc
Q psy15549 227 LGILTEHKKFVQGVAWDPKNQYVATLSS-----------DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHD 295 (621)
Q Consensus 227 ~~~~~~~~~~v~~l~~sp~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (621)
+.+-.-....-..+.|.+.|++|++--. ...+.|+++..... ++ .
T Consensus 215 l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i---------~V---------------~ 270 (561)
T COG5354 215 LVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSI---------PV---------------E 270 (561)
T ss_pred eeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeeccccc---------ce---------------e
Confidence 6554333333346889999998764321 23566666652221 11 1
Q ss_pred CCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCC
Q psy15549 296 DTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKP 375 (621)
Q Consensus 296 ~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (621)
....++|..++|.|.++.+++.+|. .+..+.++++.. +-..+......+..
T Consensus 271 ~~~~~pVhdf~W~p~S~~F~vi~g~---~pa~~s~~~lr~--------------------------Nl~~~~Pe~~rNT~ 321 (561)
T COG5354 271 KDLKDPVHDFTWEPLSSRFAVISGY---MPASVSVFDLRG--------------------------NLRFYFPEQKRNTI 321 (561)
T ss_pred ccccccceeeeecccCCceeEEecc---cccceeeccccc--------------------------ceEEecCCcccccc
Confidence 1346678999999999999888753 333333443321 11111122334456
Q ss_pred CccCCCcEEEEEEcC---CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEe------CCCcEEEEEecCCcC
Q psy15549 376 LFKLPYRIVIAVATE---NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASS------TDGYCSIISFGDNEI 446 (621)
Q Consensus 376 ~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s------~dg~i~iw~~~~~~~ 446 (621)
+|++.+++++.++-+ |.|.+||......+..... .....-+.|+|||+++.+.. .|..|.|||+.....
T Consensus 322 ~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~--~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~ 399 (561)
T COG5354 322 FFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFN--GLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKV 399 (561)
T ss_pred cccCcccEEEEecCCccccceEEeccCCceEEEEEee--cCCceEeeccCCceEEEecCCCcccccCcceEEEEecCchh
Confidence 677788999988765 6899999988765553222 23456678999999988764 488999999986544
Q ss_pred CcccCCCCCcccccCCCCCCCCcccC
Q psy15549 447 GIPYVPPSGEESKENDPTKGEPVRSE 472 (621)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~s~ 472 (621)
- ..+.+.+.|.|....+.
T Consensus 400 f--------el~~~~W~p~~~~~tts 417 (561)
T COG5354 400 F--------ELTNITWDPSGQYVTTS 417 (561)
T ss_pred h--------hhhhccccCCcccceee
Confidence 3 33344555555544333
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.2e-13 Score=138.35 Aligned_cols=298 Identities=17% Similarity=0.259 Sum_probs=189.9
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccc---cCCCeEEEEECC--CCCEEEEEeCCCcEE
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSR---HQKAVNVVRFSP--NGELLASGDDESTII 154 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~---h~~~V~~i~~sp--~g~~l~s~s~dg~i~ 154 (621)
...-..+.|+|-...++++. ...|+|||...+ .....+.. ....|+.+.+-. |..++++|+.||.|+
T Consensus 1064 ~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~-------~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIR 1136 (1387)
T KOG1517|consen 1064 NQPPKTLKFHPFEPQIAAADDRERIRVWDWEKG-------RLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIR 1136 (1387)
T ss_pred CCCCceeeecCCCceeEEcCCcceEEEEecccC-------ceeccccCCCCCCCccceeeeecccchhheeeeccCceEE
Confidence 33566788999888888888 667999999887 33444433 345788898876 455899999999999
Q ss_pred EEEccCCC-CCCCCCCCCcccccccccceee-eeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc
Q psy15549 155 VWKQKTDQ-DLPEFPSSNLDEENVNKEHWIV-TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 155 vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 232 (621)
||+--... ....+ ...|.. ...+.+..+.=.-++|.....+|++++.-..|+|||.....++..+..
T Consensus 1137 Iwk~y~~~~~~~eL-----------VTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~ 1205 (1387)
T KOG1517|consen 1137 IWKDYADKWKKPEL-----------VTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPY 1205 (1387)
T ss_pred EecccccccCCcee-----------EEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeeccc
Confidence 99743322 11111 001110 111222222225678888777788777788999999988877776643
Q ss_pred -CCcceEEEEEc-CCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 233 -HKKFVQGVAWD-PKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 233 -~~~~v~~l~~s-p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
....|+++.-+ +.|+.++.|..||.|++||.+....-... ..+....-...|..+.+.+.
T Consensus 1206 ~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v------------------~~~R~h~~~~~Iv~~slq~~ 1267 (1387)
T KOG1517|consen 1206 GSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLV------------------CVYREHNDVEPIVHLSLQRQ 1267 (1387)
T ss_pred CCCccceeecccccCCceEEEeecCCceEEeecccCCccccc------------------eeecccCCcccceeEEeecC
Confidence 33456666543 34799999999999999998763221000 00000000000222222221
Q ss_pred CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 311 g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
| .+.+++++.+
T Consensus 1268 G---------------------------------------------------------------------~~elvSgs~~ 1278 (1387)
T KOG1517|consen 1268 G---------------------------------------------------------------------LGELVSGSQD 1278 (1387)
T ss_pred C---------------------------------------------------------------------CcceeeeccC
Confidence 1 1357888899
Q ss_pred CcEEEEeCCCCceeEEEe-ccc---ccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCccc------CCCCCccccc
Q psy15549 391 NNILLYDTQHASPFAFIA-NIH---YTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY------VPPSGEESKE 460 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~-~~h---~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~------~~~~~~~~~~ 460 (621)
|.|++||++.......+. ..| .+.++++..++....+|+|+. +.|+||++....+...- ....+...++
T Consensus 1279 G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL 1357 (1387)
T KOG1517|consen 1279 GDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCL 1357 (1387)
T ss_pred CeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCccee
Confidence 999999998842222111 112 235999999999999999988 99999998754432221 1234456788
Q ss_pred CCCCCCCCcccCCCcccHHHhccc
Q psy15549 461 NDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 461 ~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
.|+|.--.++.+..|..|-++..+
T Consensus 1358 ~FHP~~~llAaG~~Ds~V~iYs~~ 1381 (1387)
T KOG1517|consen 1358 AFHPHRLLLAAGSADSTVSIYSCE 1381 (1387)
T ss_pred eecchhHhhhhccCCceEEEeecC
Confidence 899988888888888877776543
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-12 Score=123.75 Aligned_cols=333 Identities=16% Similarity=0.221 Sum_probs=211.9
Q ss_pred EEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-----------CCCc
Q psy15549 84 VNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-----------DEST 152 (621)
Q Consensus 84 V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-----------~dg~ 152 (621)
-+-+.|||-|.||++-...+|.+|--..- ..++.+. |. .|.-+.|||+.+||++-+ ....
T Consensus 213 etyv~wSP~GTYL~t~Hk~GI~lWGG~~f-------~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~ 283 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQGIALWGGESF-------DRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQ 283 (698)
T ss_pred eeeEEecCCceEEEEEeccceeeecCccH-------HHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCce
Confidence 46789999999999999999999954422 3344442 43 588999999999999865 2257
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 232 (621)
++|||+.++.....|+ ........-.-+.||.|++++|.-.. ..|.||+..+..++..-.-
T Consensus 284 l~IWDI~tG~lkrsF~------------------~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Ksl 344 (698)
T KOG2314|consen 284 LIIWDIATGLLKRSFP------------------VIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSL 344 (698)
T ss_pred EEEEEccccchhccee------------------ccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeeccccc
Confidence 9999999999877662 22222222345789999999998776 5699998766444332223
Q ss_pred CCcceEEEEEcCCCCEEEEEeC-----CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSS-----DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
.-..|....|+|.++.||--.. -..+.+..+.+++.++.-..... .-..+.|
T Consensus 345 ki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnV-----------------------sDckLhW 401 (698)
T KOG2314|consen 345 KISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNV-----------------------SDCKLHW 401 (698)
T ss_pred CCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceee-----------------------eccEEEe
Confidence 4466889999999998885433 23577777777776655432211 1146789
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
-.+|.+|++-.....-. +....+.-...+.......|+..+ .....+...+|-| .|..+++.
T Consensus 402 Qk~gdyLcvkvdR~tK~-~~~g~f~n~eIfrireKdIpve~v-elke~vi~FaWEP----------------~gdkF~vi 463 (698)
T KOG2314|consen 402 QKSGDYLCVKVDRHTKS-KVKGQFSNLEIFRIREKDIPVEVV-ELKESVIAFAWEP----------------HGDKFAVI 463 (698)
T ss_pred ccCCcEEEEEEEeeccc-cccceEeeEEEEEeeccCCCceee-ecchheeeeeecc----------------CCCeEEEE
Confidence 99999998754211101 001111111122222222333222 2344555666666 45555544
Q ss_pred Ec---CCcEEEEeCCC-C---ceeEEEecccccceEEEEEcCCCCeEEEE---eCCCcEEEEEecCCcCCcccCCCCCcc
Q psy15549 388 AT---ENNILLYDTQH-A---SPFAFIANIHYTKLTDITWSSDGKVLIAS---STDGYCSIISFGDNEIGIPYVPPSGEE 457 (621)
Q Consensus 388 ~~---dg~i~iwd~~~-~---~~~~~~~~~h~~~v~~~~~spdg~~l~s~---s~dg~i~iw~~~~~~~~~~~~~~~~~~ 457 (621)
+. ..++.+|-+.+ . +.+..+ .....+.+.|+|.|++++.+ |..|.+.++|+.-..+...-.......
T Consensus 464 ~g~~~k~tvsfY~~e~~~~~~~lVk~~---dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~a 540 (698)
T KOG2314|consen 464 SGNTVKNTVSFYAVETNIKKPSLVKEL---DKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAA 540 (698)
T ss_pred EccccccceeEEEeecCCCchhhhhhh---cccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCcccccc
Confidence 43 35889998873 2 233333 33567889999999998876 467899999998655555544444566
Q ss_pred cccCCCCCCCCcccCCCcc------cHHHhcccCccc
Q psy15549 458 SKENDPTKGEPVRSEDKPR------SAEQAKGEGKVL 488 (621)
Q Consensus 458 ~~~~~~~~~~~~~s~~~~~------~~~~w~~~~~~~ 488 (621)
+.+.+.|.|+.+.+.+.-. .-++|..+|..+
T Consensus 541 t~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqGrll 577 (698)
T KOG2314|consen 541 TEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQGRLL 577 (698)
T ss_pred ccceECCCCCEEEEeeehhhhccccceEEEEeecHHH
Confidence 7788999999887765432 234455555443
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.8e-11 Score=118.53 Aligned_cols=266 Identities=13% Similarity=0.224 Sum_probs=165.5
Q ss_pred cCcEEEEEEccCCCEEEEEcC-----CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcEE
Q psy15549 81 QKAVNVVRFSPNGELLASGDD-----VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTII 154 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~d-----~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~ 154 (621)
......++++|++++|.+... +.|..|.+..... .+..+............++++|++++|+++. .+|.|.
T Consensus 36 ~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g---~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~ 112 (345)
T PF10282_consen 36 GENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTG---TLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVS 112 (345)
T ss_dssp SSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTT---EEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcc---eeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEE
Confidence 445677899999999998763 4688888876521 2233444433445667899999999998886 588999
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeee-e---eecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCc--EE
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVT-K---ILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGK--NL 227 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~--~~ 227 (621)
++++.....+.... ..+... . ..........++.|+|+++++++... ...|.+|++.... ..
T Consensus 113 v~~l~~~g~l~~~~-----------~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~ 181 (345)
T PF10282_consen 113 VFPLDDDGSLGEVV-----------QTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLT 181 (345)
T ss_dssp EEEECTTSEEEEEE-----------EEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEE
T ss_pred EEEccCCcccceee-----------eecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEE
Confidence 99998753321110 000000 0 00123456889999999998888765 4589999997654 21
Q ss_pred --EEe-ccCCcceEEEEEcCCCCEEEEEeC-CCcEEEEEcc--Ccee--eeecccCCCCCCCccccccccccccccCCcc
Q psy15549 228 --GIL-TEHKKFVQGVAWDPKNQYVATLSS-DRSLRTYSIQ--SKKV--ISRACRSKLPVDSSHELFDKVVPLFHDDTMK 299 (621)
Q Consensus 228 --~~~-~~~~~~v~~l~~sp~~~~l~s~~~-dg~i~iwd~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (621)
..+ .......+.++|+|+++++++..+ ++.|.+|++. .+.. +..+... +. .....
T Consensus 182 ~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~--~~---------------~~~~~ 244 (345)
T PF10282_consen 182 PVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTL--PE---------------GFTGE 244 (345)
T ss_dssp EEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESC--ET---------------TSCSS
T ss_pred EeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeec--cc---------------ccccc
Confidence 222 134456789999999999877665 6789999988 4432 2222110 00 00111
Q ss_pred cceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccC
Q psy15549 300 SFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKL 379 (621)
Q Consensus 300 ~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (621)
.....++++|||++|+++..
T Consensus 245 ~~~~~i~ispdg~~lyvsnr------------------------------------------------------------ 264 (345)
T PF10282_consen 245 NAPAEIAISPDGRFLYVSNR------------------------------------------------------------ 264 (345)
T ss_dssp SSEEEEEE-TTSSEEEEEEC------------------------------------------------------------
T ss_pred CCceeEEEecCCCEEEEEec------------------------------------------------------------
Confidence 24578899999999888661
Q ss_pred CCcEEEEEEcCCcEEEEeCC--CCc--eeEEEecccccceEEEEEcCCCCeEEEEe-CCCcEEEEEec--CCcCC
Q psy15549 380 PYRIVIAVATENNILLYDTQ--HAS--PFAFIANIHYTKLTDITWSSDGKVLIASS-TDGYCSIISFG--DNEIG 447 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~--~~~--~~~~~~~~h~~~v~~~~~spdg~~l~s~s-~dg~i~iw~~~--~~~~~ 447 (621)
..+.|.+|++. ++. .+..+.. .......++++|+|++|+++. .++.|.+|+++ +|.+.
T Consensus 265 ---------~~~sI~vf~~d~~~g~l~~~~~~~~-~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~ 329 (345)
T PF10282_consen 265 ---------GSNSISVFDLDPATGTLTLVQTVPT-GGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLT 329 (345)
T ss_dssp ---------TTTEEEEEEECTTTTTEEEEEEEEE-SSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred ---------cCCEEEEEEEecCCCceEEEEEEeC-CCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEE
Confidence 24566777762 232 2222322 234578999999999999886 66789999885 55543
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.57 E-value=5e-13 Score=119.07 Aligned_cols=155 Identities=23% Similarity=0.458 Sum_probs=111.8
Q ss_pred EEEEEccCCCEEEEEcC-----------CceEEEEeccCccccccceeccccc-ccCCCeEEEEECCCCCEEEEE--eCC
Q psy15549 85 NVVRFSPNGELLASGDD-----------VGKEIWYLTERESGIANVEFASDLS-RHQKAVNVVRFSPNGELLASG--DDE 150 (621)
Q Consensus 85 ~~l~~spdg~~las~~d-----------~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~i~~sp~g~~l~s~--s~d 150 (621)
..+.|+|+|.+|+.-.+ +...+|.+...+. ....+. ...++|.+++|+|+|+.||+. ..+
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~------~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~ 82 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNI------PVESIELKKEGPIHDVAWSPNGNEFAVIYGSMP 82 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCC------ccceeeccCCCceEEEEECcCCCEEEEEEccCC
Confidence 45779999998876332 1246777754432 222222 234579999999999987654 456
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC---CCeEEEEECCCCcEE
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV---DNTAIMWDVHKGKNL 227 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~---dg~i~vwd~~~~~~~ 227 (621)
+.|.+||++ .+.+ . .-+...+..+.|+|+|++|++++. .|.|.+||+++.+.+
T Consensus 83 ~~v~lyd~~-~~~i---------------------~--~~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i 138 (194)
T PF08662_consen 83 AKVTLYDVK-GKKI---------------------F--SFGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKI 138 (194)
T ss_pred cccEEEcCc-ccEe---------------------E--eecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEe
Confidence 799999996 3222 2 223566789999999999999875 467999999988888
Q ss_pred EEeccCCcceEEEEEcCCCCEEEEEeC------CCcEEEEEccCceeeeec
Q psy15549 228 GILTEHKKFVQGVAWDPKNQYVATLSS------DRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~~~l~s~~~------dg~i~iwd~~~~~~~~~~ 272 (621)
.... | ..++.++|+|+|++|+++.. |+.++||++. |+.+...
T Consensus 139 ~~~~-~-~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~~ 186 (194)
T PF08662_consen 139 STFE-H-SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYKK 186 (194)
T ss_pred eccc-c-CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEec
Confidence 7764 3 34789999999999998875 7889999984 5555443
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.2e-13 Score=127.22 Aligned_cols=283 Identities=14% Similarity=0.189 Sum_probs=190.0
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccc--cCcEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRH--QKAVNVV 87 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h--~~~V~~l 87 (621)
+.|...-+.|..+|||+ +.||+|..--.|+ +||+...... +.-| ...|.-.
T Consensus 48 fe~p~ast~ik~s~DGq----Y~lAtG~YKP~ik--------------vydlanLSLK---------FERhlDae~V~fe 100 (703)
T KOG2321|consen 48 FEMPTASTRIKVSPDGQ----YLLATGTYKPQIK--------------VYDLANLSLK---------FERHLDAEVVDFE 100 (703)
T ss_pred cCCccccceeEecCCCc----EEEEecccCCceE--------------EEEcccceee---------eeecccccceeEE
Confidence 34666788999999999 7888999999999 7776644321 3333 2334444
Q ss_pred EEccCCCE-EEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGEL-LASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~-las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
-.+.|-.- +....|..|.+-...... ....+ ...-..++++.-..-|++++....|.-++++.+..+..
T Consensus 101 iLsDD~SK~v~L~~DR~IefHak~G~h-------y~~RI---P~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P 170 (703)
T KOG2321|consen 101 ILSDDYSKSVFLQNDRTIEFHAKYGRH-------YRTRI---PKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNP 170 (703)
T ss_pred EeccchhhheEeecCceeeehhhcCee-------eeeec---CcCCccccccCCCccEEEeecCcceEEEEccccccccc
Confidence 44544333 333345555433222110 00000 11223455554333344555556788899999987643
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc------CCc-----
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE------HKK----- 235 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~------~~~----- 235 (621)
+....+.++++..++-..+|++|+.+|.|-.||.++...+.++.. |.+
T Consensus 171 ---------------------~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~ 229 (703)
T KOG2321|consen 171 ---------------------FETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAP 229 (703)
T ss_pred ---------------------cccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccC
Confidence 345568899999999888999999999999999998776665532 322
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
.|+++.|+.+|-.+++|+.+|.+.|||+++.+.+..- ......+|..+.|.+.+.
T Consensus 230 svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k----------------------dh~~e~pi~~l~~~~~~~--- 284 (703)
T KOG2321|consen 230 SVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK----------------------DHGYELPIKKLDWQDTDQ--- 284 (703)
T ss_pred cceEEEecCCceeEEeeccCCcEEEEEcccCCceeec----------------------ccCCccceeeecccccCC---
Confidence 4999999999999999999999999999987765432 112233455666654411
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
.-.++......++|
T Consensus 285 ------------------------------------------------------------------q~~v~S~Dk~~~ki 298 (703)
T KOG2321|consen 285 ------------------------------------------------------------------QNKVVSMDKRILKI 298 (703)
T ss_pred ------------------------------------------------------------------CceEEecchHHhhh
Confidence 11222234467899
Q ss_pred EeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 396 YDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
||-.+|++...+. ....+..+|+-|++.+++++-.++.+..|=+..
T Consensus 299 Wd~~~Gk~~asiE--pt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 299 WDECTGKPMASIE--PTSDLNDFCFVPGSGMFFTANESSKMHTYYIPS 344 (703)
T ss_pred cccccCCceeecc--ccCCcCceeeecCCceEEEecCCCcceeEEccc
Confidence 9999999998885 345699999999999999998888887776654
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.7e-15 Score=138.41 Aligned_cols=232 Identities=14% Similarity=0.164 Sum_probs=176.5
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE
Q psy15549 129 QKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 129 ~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~ 208 (621)
...-..+.++.+|++|+.|+..|.|..+|..++.....+ .-...|..+.|-.+.+++|
T Consensus 129 eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei----------------------~v~Etv~Dv~~LHneq~~A 186 (545)
T KOG1272|consen 129 EFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEI----------------------NVMETVRDVTFLHNEQFFA 186 (545)
T ss_pred ccCCeeeeecCCccEEEecCCccceeeeecccceeeeee----------------------ehhhhhhhhhhhcchHHHH
Confidence 345668899999999999999999999999999865333 3345688899988888888
Q ss_pred EEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccc
Q psy15549 209 SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDK 288 (621)
Q Consensus 209 s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (621)
++- ...++||| ..|..++.++.| ..|..+.|-|.--+|++++..|.++.-|+.+|+.+..+......
T Consensus 187 VAQ-K~y~yvYD-~~GtElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~---------- 253 (545)
T KOG1272|consen 187 VAQ-KKYVYVYD-NNGTELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGR---------- 253 (545)
T ss_pred hhh-hceEEEec-CCCcEEeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCc----------
Confidence 765 56799999 578888888765 45889999998888999999999999999999987766432211
Q ss_pred cccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeec
Q psy15549 289 VVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFEL 368 (621)
Q Consensus 289 ~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (621)
+..|+-+|-+
T Consensus 254 -------------~~vm~qNP~N--------------------------------------------------------- 263 (545)
T KOG1272|consen 254 -------------TDVMKQNPYN--------------------------------------------------------- 263 (545)
T ss_pred -------------cchhhcCCcc---------------------------------------------------------
Confidence 1122222221
Q ss_pred CCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCc
Q psy15549 369 KPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGI 448 (621)
Q Consensus 369 ~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~ 448 (621)
..+-.|...|+|.+|.....+++..+.. |.++|.++++.++|+|+||++.|..|+|||+..-....
T Consensus 264 -------------aVih~GhsnGtVSlWSP~skePLvKiLc-H~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~ 329 (545)
T KOG1272|consen 264 -------------AVIHLGHSNGTVSLWSPNSKEPLVKILC-HRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLH 329 (545)
T ss_pred -------------ceEEEcCCCceEEecCCCCcchHHHHHh-cCCCcceEEECCCCcEEeecccccceeEeeeccccccc
Confidence 2344555789999999999999988854 99999999999999999999999999999998765444
Q ss_pred ccCCCCCcccccCCCCCCCCcccCCCcccHHHhc
Q psy15549 449 PYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~ 482 (621)
.+.. ......+.++..|- ...+....+.+|.
T Consensus 330 t~~t-p~~a~~ls~Sqkgl--LA~~~G~~v~iw~ 360 (545)
T KOG1272|consen 330 TYRT-PHPASNLSLSQKGL--LALSYGDHVQIWK 360 (545)
T ss_pred eeec-CCCccccccccccc--eeeecCCeeeeeh
Confidence 4433 34455566776664 3344444566776
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.3e-13 Score=135.13 Aligned_cols=202 Identities=15% Similarity=0.165 Sum_probs=131.8
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecC-CceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGA-DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~-dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
+.+..+.+.+.+.+|+|||+ .|+..+. ++.-.+| +||+.++.... +....+.+.
T Consensus 189 ~~l~~~~~~v~~p~wSPDG~-----~la~~s~~~~~~~I~------------~~dl~~g~~~~--------l~~~~g~~~ 243 (427)
T PRK02889 189 QSALSSPEPIISPAWSPDGT-----KLAYVSFESKKPVVY------------VHDLATGRRRV--------VANFKGSNS 243 (427)
T ss_pred eEeccCCCCcccceEcCCCC-----EEEEEEccCCCcEEE------------EEECCCCCEEE--------eecCCCCcc
Confidence 33445677899999999998 8877654 3322233 88987764321 222334567
Q ss_pred EEEEccCCCEEEEE-c-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CCcEEEEEcc--C
Q psy15549 86 VVRFSPNGELLASG-D-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-ESTIIVWKQK--T 160 (621)
Q Consensus 86 ~l~~spdg~~las~-~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg~i~vwd~~--~ 160 (621)
+.+|+|||+.|+.. + ++...||.+..... ....+..+...+....|+|||+.|+..+. +|...||.+. +
T Consensus 244 ~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~------~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~ 317 (427)
T PRK02889 244 APAWSPDGRTLAVALSRDGNSQIYTVNADGS------GLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASG 317 (427)
T ss_pred ceEECCCCCEEEEEEccCCCceEEEEECCCC------CcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCC
Confidence 89999999988753 4 66677777654321 13334445555677899999998886654 4666777654 3
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC---eEEEEECCCCcEEEEeccCCcce
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN---TAIMWDVHKGKNLGILTEHKKFV 237 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~v 237 (621)
+.. ..+..+........|+|||++|+..+.++ .|.+||+.+++... +... ...
T Consensus 318 g~~----------------------~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~~~ 373 (427)
T PRK02889 318 GAA----------------------QRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDT-TRD 373 (427)
T ss_pred Cce----------------------EEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCC-CCc
Confidence 321 11111223344678999999998877654 69999998887543 3322 334
Q ss_pred EEEEEcCCCCEEEEEeCCC---cEEEEEc
Q psy15549 238 QGVAWDPKNQYVATLSSDR---SLRTYSI 263 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg---~i~iwd~ 263 (621)
..+.|+|||+.|+.++.++ .+.+.++
T Consensus 374 ~~p~~spdg~~l~~~~~~~g~~~l~~~~~ 402 (427)
T PRK02889 374 ESPSFAPNGRYILYATQQGGRSVLAAVSS 402 (427)
T ss_pred cCceECCCCCEEEEEEecCCCEEEEEEEC
Confidence 6789999999988877654 3555555
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.9e-13 Score=120.97 Aligned_cols=262 Identities=15% Similarity=0.209 Sum_probs=179.5
Q ss_pred cccCcEEEEEEccCCC--EEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy15549 79 RHQKAVNVVRFSPNGE--LLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIV 155 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~--~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~v 155 (621)
.....|..++|.-+++ .|...+ +..+..+.+....... .+..........+.|..++.. +| .|++|-.+|.+.+
T Consensus 53 ~~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s-~~~~~~~~~l~~~~I~gl~~~-dg-~Litc~~sG~l~~ 129 (412)
T KOG3881|consen 53 DELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISS-SLDDAKTVSLGTKSIKGLKLA-DG-TLITCVSSGNLQV 129 (412)
T ss_pred chhhhhhhheeecCCceeEeeccccCcccccccccCCcccc-ccccccccccccccccchhhc-CC-EEEEEecCCcEEE
Confidence 3456788889987654 455553 6666666665542211 111122344556677776664 33 6888889999999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCC--CeEEEEECCCCcEEEEecc
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVD--NTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~d--g~i~vwd~~~~~~~~~~~~ 232 (621)
|....+...... ...+.. ...+..+.-++.. .++++|+.. ..+.+||+++.+.+.+-+.
T Consensus 130 ~~~k~~d~hss~-----------------l~~la~-g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKN 191 (412)
T KOG3881|consen 130 RHDKSGDLHSSK-----------------LIKLAT-GPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKN 191 (412)
T ss_pred EeccCCcccccc-----------------ceeeec-CCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccC
Confidence 998855421110 112222 2456667777644 456668888 8899999998866554332
Q ss_pred C---------CcceEEEEEcCC--CCEEEEEeCCCcEEEEEccCce-eeeecccCCCCCCCccccccccccccccCCccc
Q psy15549 233 H---------KKFVQGVAWDPK--NQYVATLSSDRSLRTYSIQSKK-VISRACRSKLPVDSSHELFDKVVPLFHDDTMKS 300 (621)
Q Consensus 233 ~---------~~~v~~l~~sp~--~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (621)
- .-.++.+.|-+. ...|++++.-+.||+||.+.++ .+..+. -...
T Consensus 192 vpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd-----------------------~~E~ 248 (412)
T KOG3881|consen 192 VPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFD-----------------------FLEN 248 (412)
T ss_pred CCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEec-----------------------cccC
Confidence 1 124678889887 7889999999999999998654 233332 2234
Q ss_pred ceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCC
Q psy15549 301 FFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLP 380 (621)
Q Consensus 301 ~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (621)
.|+++...|+|++++++.
T Consensus 249 ~is~~~l~p~gn~Iy~gn-------------------------------------------------------------- 266 (412)
T KOG3881|consen 249 PISSTGLTPSGNFIYTGN-------------------------------------------------------------- 266 (412)
T ss_pred cceeeeecCCCcEEEEec--------------------------------------------------------------
Confidence 456777777777766654
Q ss_pred CcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCC
Q psy15549 381 YRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 381 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
.-+.+..||++.++.+.....+..+.|+++..+|.+++|++|+-|..|||+|+++..++....-.+
T Consensus 267 --------~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs 332 (412)
T KOG3881|consen 267 --------TKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKS 332 (412)
T ss_pred --------ccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhc
Confidence 567888999999988887557788999999999999999999999999999999977766554433
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.7e-13 Score=135.23 Aligned_cols=204 Identities=14% Similarity=0.168 Sum_probs=138.0
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecC---CceEEeeeccCccccccceeEEeccccccccceeeccccccccC
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGA---DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK 82 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~---dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~ 82 (621)
++.+..|.+.+.+.+|+|||+ .|+..+. +..|. +|++.++... .+..+.+
T Consensus 194 ~~~lt~~~~~v~~p~wSpDG~-----~lay~s~~~g~~~i~--------------~~dl~~g~~~--------~l~~~~g 246 (435)
T PRK05137 194 VRYLTDGSSLVLTPRFSPNRQ-----EITYMSYANGRPRVY--------------LLDLETGQRE--------LVGNFPG 246 (435)
T ss_pred cEEEecCCCCeEeeEECCCCC-----EEEEEEecCCCCEEE--------------EEECCCCcEE--------EeecCCC
Confidence 344556778999999999998 8877653 34566 8998766432 1345566
Q ss_pred cEEEEEEccCCCEEEEE-c-CCc--eEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CC--cEEE
Q psy15549 83 AVNVVRFSPNGELLASG-D-DVG--KEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-ES--TIIV 155 (621)
Q Consensus 83 ~V~~l~~spdg~~las~-~-d~~--v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg--~i~v 155 (621)
.+.+.+|+|||+.|+.. + ++. |.+|++..+. ...+..+........|+|||+.|+..+. +| .|.+
T Consensus 247 ~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~--------~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~ 318 (435)
T PRK05137 247 MTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT--------TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYV 318 (435)
T ss_pred cccCcEECCCCCEEEEEEecCCCceEEEEECCCCc--------eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEE
Confidence 77889999999987654 3 444 5555665431 2334556666778999999998887763 33 5777
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEecc
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD---NTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~ 232 (621)
||+.++.. ..+..+...+....|+|||++|+....+ ..|.+||+..+.. ..+..
T Consensus 319 ~d~~g~~~----------------------~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~ 375 (435)
T PRK05137 319 MNADGSNP----------------------RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTS 375 (435)
T ss_pred EECCCCCe----------------------EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccC
Confidence 88766542 2222334556778999999999887653 3688889865543 33432
Q ss_pred CCcceEEEEEcCCCCEEEEEeCC------CcEEEEEccCcee
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSD------RSLRTYSIQSKKV 268 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~d------g~i~iwd~~~~~~ 268 (621)
...+..+.|+|||+.|+..+.+ ..+.++|+..+..
T Consensus 376 -~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~ 416 (435)
T PRK05137 376 -GFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE 416 (435)
T ss_pred -CCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce
Confidence 2346788999999998876543 2577778765443
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-12 Score=133.96 Aligned_cols=201 Identities=16% Similarity=0.184 Sum_probs=133.7
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCC---ceEEeeeccCccccccceeEEeccccccccceeeccccccccC
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGAD---SHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK 82 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~d---g~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~ 82 (621)
+..+..|...+.+.+|+|||+ .|+..+.+ ..|. +|++.++.... +..+.+
T Consensus 196 ~~~lt~~~~~v~~p~wSpDg~-----~la~~s~~~~~~~l~--------------~~dl~~g~~~~--------l~~~~g 248 (433)
T PRK04922 196 PQTILRSAEPILSPAWSPDGK-----KLAYVSFERGRSAIY--------------VQDLATGQREL--------VASFRG 248 (433)
T ss_pred ceEeecCCCccccccCCCCCC-----EEEEEecCCCCcEEE--------------EEECCCCCEEE--------eccCCC
Confidence 344555677899999999998 88877633 3455 88887654321 223344
Q ss_pred cEEEEEEccCCCEEEEE-c-CC--ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CCc--EEE
Q psy15549 83 AVNVVRFSPNGELLASG-D-DV--GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-EST--IIV 155 (621)
Q Consensus 83 ~V~~l~~spdg~~las~-~-d~--~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg~--i~v 155 (621)
...+++|+|||+.|+.. + ++ .|.+|++..+. ...+..+......++|+|||++|+.++. +|. |.+
T Consensus 249 ~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~--------~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~ 320 (433)
T PRK04922 249 INGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQ--------LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYR 320 (433)
T ss_pred CccCceECCCCCEEEEEEeCCCCceEEEEECCCCC--------eEECccCCCCccceEECCCCCEEEEEECCCCCceEEE
Confidence 45678999999987653 3 33 47788876652 2334455555677899999998887763 444 556
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC---eEEEEECCCCcEEEEecc
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN---TAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~ 232 (621)
+++.+++. ..+..+......++|+|||++|+..+.++ .|.+||+.+++.. .+.
T Consensus 321 ~dl~~g~~----------------------~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt- 376 (433)
T PRK04922 321 VAASGGSA----------------------ERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT- 376 (433)
T ss_pred EECCCCCe----------------------EEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-
Confidence 66655542 11222233445789999999998765443 6999999887754 443
Q ss_pred CCcceEEEEEcCCCCEEEEEeCC---CcEEEEEccC
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSD---RSLRTYSIQS 265 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~d---g~i~iwd~~~ 265 (621)
+......+.|+|||++|+..+.+ +.|.++++..
T Consensus 377 ~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g 412 (433)
T PRK04922 377 PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDG 412 (433)
T ss_pred CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence 22345567999999998877653 3577777744
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.8e-12 Score=113.83 Aligned_cols=242 Identities=15% Similarity=0.179 Sum_probs=159.1
Q ss_pred EEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEE-EeCC------CcEEEE
Q psy15549 84 VNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS-GDDE------STIIVW 156 (621)
Q Consensus 84 V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s-~s~d------g~i~vw 156 (621)
..+++|+.|..-+++|.+.+.+||+.+.-.. .....+....-.+..+-| -.++||. |+.+ ..|.||
T Consensus 8 ~lsvs~NQD~ScFava~~~Gfriyn~~P~ke-----~~~r~~~~~G~~~veMLf--R~N~laLVGGg~~pky~pNkviIW 80 (346)
T KOG2111|consen 8 TLSVSFNQDHSCFAVATDTGFRIYNCDPFKE-----SASRQFIDGGFKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIW 80 (346)
T ss_pred eeEEEEccCCceEEEEecCceEEEecCchhh-----hhhhccccCchhhhhHhh--hhceEEEecCCCCCCCCCceEEEE
Confidence 4559999999999999999999999875321 111111111122333333 2345554 3332 379999
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC-CCcEEEEeccC--
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH-KGKNLGILTEH-- 233 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~-- 233 (621)
|=....++. ......+|.++.+.++ +|++.- .+.|.||... +.+.++.+...
T Consensus 81 DD~k~~~i~----------------------el~f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~N 135 (346)
T KOG2111|consen 81 DDLKERCII----------------------ELSFNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSN 135 (346)
T ss_pred ecccCcEEE----------------------EEEeccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccC
Confidence 944443322 2245678999999876 555554 6789999887 44555554322
Q ss_pred CcceEEEEEcCCCCEEEEEe-CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC
Q psy15549 234 KKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 312 (621)
...+.+++-+.+..+||.-+ .-|.|+|-|+...+.-. -.....|.+.|.+++++-+|.
T Consensus 136 PkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~---------------------p~~I~AH~s~Iacv~Ln~~Gt 194 (346)
T KOG2111|consen 136 PKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNA---------------------PSIINAHDSDIACVALNLQGT 194 (346)
T ss_pred CCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCC---------------------ceEEEcccCceeEEEEcCCcc
Confidence 22233332222334455433 45899999987654310 012235667788899988888
Q ss_pred eEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC-
Q psy15549 313 LLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN- 391 (621)
Q Consensus 313 ~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg- 391 (621)
.+|+++ ..|
T Consensus 195 ~vATaS----------------------------------------------------------------------tkGT 204 (346)
T KOG2111|consen 195 LVATAS----------------------------------------------------------------------TKGT 204 (346)
T ss_pred EEEEec----------------------------------------------------------------------cCcE
Confidence 888776 334
Q ss_pred cEEEEeCCCCceeEEEecc-cccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCc
Q psy15549 392 NILLYDTQHASPFAFIANI-HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGI 448 (621)
Q Consensus 392 ~i~iwd~~~~~~~~~~~~~-h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~ 448 (621)
-|+|||..+|..+..+..| ....|.+|+|||++.+||++|+.|+|.||.+.......
T Consensus 205 LIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~~~~ 262 (346)
T KOG2111|consen 205 LIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTENTE 262 (346)
T ss_pred EEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecCCCCc
Confidence 4789999999999998764 34579999999999999999999999999998755433
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.5e-13 Score=132.38 Aligned_cols=312 Identities=12% Similarity=0.056 Sum_probs=176.5
Q ss_pred CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCccccccccc
Q psy15549 101 DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKE 180 (621)
Q Consensus 101 d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 180 (621)
++.|.+.|..+. +.+..+......-..+.|+|||+++++++.||.|.++|+.+.+.+
T Consensus 15 ~~~v~viD~~t~-------~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v---------------- 71 (369)
T PF02239_consen 15 SGSVAVIDGATN-------KVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVV---------------- 71 (369)
T ss_dssp GTEEEEEETTT--------SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEE----------------
T ss_pred CCEEEEEECCCC-------eEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEE----------------
Confidence 788999998776 555566544333345789999999999999999999999999854
Q ss_pred ceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCcEEEEeccC-------CcceEEEEEcCCCCEEEEE
Q psy15549 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGKNLGILTEH-------KKFVQGVAWDPKNQYVATL 252 (621)
Q Consensus 181 ~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~-------~~~v~~l~~sp~~~~l~s~ 252 (621)
..... .....++++++||+++++++ ..+.+.++|.++.+.++.+... ...+.++..+|....++..
T Consensus 72 -----~~i~~-G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~ 145 (369)
T PF02239_consen 72 -----ATIKV-GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVN 145 (369)
T ss_dssp -----EEEE--SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEE
T ss_pred -----EEEec-CCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEE
Confidence 23332 34468899999999998776 4899999999999998887532 3456788888888866655
Q ss_pred eCC-CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcce
Q psy15549 253 SSD-RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPI 331 (621)
Q Consensus 253 ~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~ 331 (621)
-.| +.|.+.|....+.+.... ...........|+|+++|++++.. ....+.++
T Consensus 146 lkd~~~I~vVdy~d~~~~~~~~----------------------i~~g~~~~D~~~dpdgry~~va~~----~sn~i~vi 199 (369)
T PF02239_consen 146 LKDTGEIWVVDYSDPKNLKVTT----------------------IKVGRFPHDGGFDPDGRYFLVAAN----GSNKIAVI 199 (369)
T ss_dssp ETTTTEEEEEETTTSSCEEEEE----------------------EE--TTEEEEEE-TTSSEEEEEEG----GGTEEEEE
T ss_pred EccCCeEEEEEeccccccceee----------------------ecccccccccccCcccceeeeccc----ccceeEEE
Confidence 554 778777876653322110 011223467899999999877642 23344444
Q ss_pred eeeeeeeecccCCCceecCCcccce---eeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEe
Q psy15549 332 SVTHVFTRACLNKPAVCLPSLQYYS---VAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIA 408 (621)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 408 (621)
+.............. ..+.... ....+.|..... ..+...++.-..+.+.+||....+.+..+.
T Consensus 200 D~~~~k~v~~i~~g~---~p~~~~~~~~php~~g~vw~~~----------~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~ 266 (369)
T PF02239_consen 200 DTKTGKLVALIDTGK---KPHPGPGANFPHPGFGPVWATS----------GLGYFAIPLIGTDPVSVHDDYAWKVVKTIP 266 (369)
T ss_dssp ETTTTEEEEEEE-SS---SBEETTEEEEEETTTEEEEEEE----------BSSSSEEEEEE--TTT-STTTBTSEEEEEE
T ss_pred eeccceEEEEeeccc---cccccccccccCCCcceEEeec----------cccceecccccCCccccchhhcCeEEEEEE
Confidence 433211111000000 0000010 111111110000 011223333344566689999999999986
Q ss_pred cccccceEEEEEcCCCCeEEEE----eCCCcEEEEEecCCcCCcccCC-CCCcccccCCCCCCCCcccCCC--cccHHHh
Q psy15549 409 NIHYTKLTDITWSSDGKVLIAS----STDGYCSIISFGDNEIGIPYVP-PSGEESKENDPTKGEPVRSEDK--PRSAEQA 481 (621)
Q Consensus 409 ~~h~~~v~~~~~spdg~~l~s~----s~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~--~~~~~~w 481 (621)
. .... .-+..+|++++|.+. ...++|.++|..+.+....+.. .........|+++|+.+-.+.. ++.+.++
T Consensus 267 ~-~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~ 344 (369)
T PF02239_consen 267 T-QGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVY 344 (369)
T ss_dssp --SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEE
T ss_pred C-CCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEE
Confidence 4 4444 788889999999988 4558999999999877666643 2223667789999985543322 2245555
Q ss_pred c
Q psy15549 482 K 482 (621)
Q Consensus 482 ~ 482 (621)
+
T Consensus 345 D 345 (369)
T PF02239_consen 345 D 345 (369)
T ss_dssp E
T ss_pred E
Confidence 4
|
... |
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.3e-10 Score=105.05 Aligned_cols=302 Identities=13% Similarity=0.173 Sum_probs=178.1
Q ss_pred eEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc----CCceEEEEeccCccccccceecccccccCCCeE
Q psy15549 58 IWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD----DVGKEIWYLTERESGIANVEFASDLSRHQKAVN 133 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~----d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 133 (621)
+|++.+...... ...+-.+.+.++-|+|+|+++.|.++. .++|..|.++.... .+..+........+-+
T Consensus 20 v~~ld~~~g~l~----~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G---~Lt~ln~~~~~g~~p~ 92 (346)
T COG2706 20 VFNLDTKTGELS----LLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDG---RLTFLNRQTLPGSPPC 92 (346)
T ss_pred EEEEeCcccccc----hhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCC---eEEEeeccccCCCCCe
Confidence 787775443322 112445677899999999999988864 56788888876422 1222322222233448
Q ss_pred EEEECCCCCEEEEEeC-CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCC----------eEEEEECC
Q psy15549 134 VVRFSPNGELLASGDD-ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLED----------VYDISWSP 202 (621)
Q Consensus 134 ~i~~sp~g~~l~s~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------v~~i~~sp 202 (621)
.++++++|++++++.. .|.|.++-+.....+... .....|.+. +.+..+.|
T Consensus 93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~------------------v~~~~h~g~~p~~rQ~~~h~H~a~~tP 154 (346)
T COG2706 93 YVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPV------------------VQVVKHTGSGPHERQESPHVHSANFTP 154 (346)
T ss_pred EEEECCCCCEEEEEEccCceEEEEEcccCCccccc------------------eeeeecCCCCCCccccCCccceeeeCC
Confidence 8999999999998864 578999998765443222 111122222 78899999
Q ss_pred CCCEEEEEeC-CCeEEEEECCCCcEEEEec---cCCcceEEEEEcCCCCEEEEEeC-CCcEEEEEccCc-eeeeecccCC
Q psy15549 203 TSTHLISGSV-DNTAIMWDVHKGKNLGILT---EHKKFVQGVAWDPKNQYVATLSS-DRSLRTYSIQSK-KVISRACRSK 276 (621)
Q Consensus 203 d~~~l~s~~~-dg~i~vwd~~~~~~~~~~~---~~~~~v~~l~~sp~~~~l~s~~~-dg~i~iwd~~~~-~~~~~~~~~~ 276 (621)
++++|++.+. -..|.+|++..|.....-. ......+.|.|+|++++.++.++ +++|.+|..... ..+..+....
T Consensus 155 ~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~ 234 (346)
T COG2706 155 DGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTID 234 (346)
T ss_pred CCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeec
Confidence 9999998765 3579999999776432211 23455789999999999887665 899999998773 2222221110
Q ss_pred CCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccce
Q psy15549 277 LPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYS 356 (621)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (621)
.+........+...+.+++||++|+++... ...|.++.+.. ........ ...
T Consensus 235 --------------tlP~dF~g~~~~aaIhis~dGrFLYasNRg----~dsI~~f~V~~------~~g~L~~~----~~~ 286 (346)
T COG2706 235 --------------TLPEDFTGTNWAAAIHISPDGRFLYASNRG----HDSIAVFSVDP------DGGKLELV----GIT 286 (346)
T ss_pred --------------cCccccCCCCceeEEEECCCCCEEEEecCC----CCeEEEEEEcC------CCCEEEEE----EEe
Confidence 000112223455789999999999987632 12333332221 00000000 000
Q ss_pred eeeeccceeeecCCCCCCCCccCCCcEEEEEEcC-CcEEEEeCC--CCceeEEEecccccceEEEEEc
Q psy15549 357 VAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE-NNILLYDTQ--HASPFAFIANIHYTKLTDITWS 421 (621)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-g~i~iwd~~--~~~~~~~~~~~h~~~v~~~~~s 421 (621)
..-.-.|..|. +.+.+++|+++..+ ..|.+|.+. +|+.-............||.|.
T Consensus 287 ~teg~~PR~F~---------i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~ 345 (346)
T COG2706 287 PTEGQFPRDFN---------INPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL 345 (346)
T ss_pred ccCCcCCccce---------eCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence 00011222222 33456888888875 467787654 4543333322344556677764
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-11 Score=127.42 Aligned_cols=197 Identities=19% Similarity=0.252 Sum_probs=152.3
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccC----cEEEEEE
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK----AVNVVRF 89 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~----~V~~l~~ 89 (621)
++|....+.-+.. .++.+..+..+. +||......... +..... ...-+-+
T Consensus 88 ~wi~g~~l~~e~k-----~i~l~~~~ns~~--------------i~d~~~~~~~~~-------i~~~er~~l~~~~~~g~ 141 (967)
T KOG0974|consen 88 DWIFGAKLFEENK-----KIALVTSRNSLL--------------IRDSKNSSVLSK-------IQSDERCTLYSSLIIGD 141 (967)
T ss_pred ccccccchhhhcc-----eEEEEEcCceEE--------------EEecccCceehh-------cCCCceEEEEeEEEEec
Confidence 3444555555555 888888888888 777765543221 111111 1222335
Q ss_pred ccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 90 SPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 90 spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
+++.-++++|+ -+.+.+|+.... .....+.+|.+.|..+.|+-||.+++++|+|.++|+|++++.+...
T Consensus 142 s~~~~~i~~gsv~~~iivW~~~~d-------n~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~--- 211 (967)
T KOG0974|consen 142 SAEELYIASGSVFGEIIVWKPHED-------NKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG--- 211 (967)
T ss_pred cCcEEEEEeccccccEEEEecccc-------CCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC---
Confidence 66777888888 889999999844 2233688999999999999999999999999999999999998653
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCC-cceEEEEEcCCCC
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHK-KFVQGVAWDPKNQ 247 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~v~~l~~sp~~~ 247 (621)
....+|...|+.+.|.|+ .+++++.|.++++|+. .+..+..+..|. ..|..++..++..
T Consensus 212 -----------------~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~-~~~~l~~y~~h~g~~iw~~~~~~~~~ 271 (967)
T KOG0974|consen 212 -----------------CTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGV-NGTQLEVYDEHSGKGIWKIAVPIGVI 271 (967)
T ss_pred -----------------cccccccceeEEEEeccc--eeEEeccceEEEEEec-ccceehhhhhhhhcceeEEEEcCCce
Confidence 245689999999999998 8999999999999976 455556777775 4689999999999
Q ss_pred EEEEEeCCCcEEEEEccCc
Q psy15549 248 YVATLSSDRSLRTYSIQSK 266 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd~~~~ 266 (621)
.+++++.|+.+++|++...
T Consensus 272 ~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 272 IKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred EEEeeccCcchhhhhhhcc
Confidence 9999999999999998653
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.6e-11 Score=117.61 Aligned_cols=326 Identities=19% Similarity=0.262 Sum_probs=206.9
Q ss_pred EEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEE
Q psy15549 17 LSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL 96 (621)
Q Consensus 17 ~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~l 96 (621)
+-+.|||.|. ||+|-..-|.. +|-=..-.... .+ .|. .|.-+.|||..+||
T Consensus 214 tyv~wSP~GT-----YL~t~Hk~GI~---------------lWGG~~f~r~~-------RF-~Hp-~Vq~idfSP~EkYL 264 (698)
T KOG2314|consen 214 TYVRWSPKGT-----YLVTFHKQGIA---------------LWGGESFDRIQ-------RF-YHP-GVQFIDFSPNEKYL 264 (698)
T ss_pred eeEEecCCce-----EEEEEecccee---------------eecCccHHHHH-------hc-cCC-CceeeecCCccceE
Confidence 5688999998 99999988876 88433322211 12 343 58999999999999
Q ss_pred EEEc------------CCceEEEEeccCccccccceecccccc--cCCCe-EEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 97 ASGD------------DVGKEIWYLTERESGIANVEFASDLSR--HQKAV-NVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 97 as~~------------d~~v~iw~~~~~~~~~~~~~~~~~~~~--h~~~V-~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
++-+ ...++|||+.++. ..+.+.. ....+ .-+.||.|++|+|.-..+ +|.||+..+.
T Consensus 265 VT~s~~p~~~~~~d~e~~~l~IWDI~tG~-------lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-sisIyEtpsf 336 (698)
T KOG2314|consen 265 VTYSPEPIIVEEDDNEGQQLIIWDIATGL-------LKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-SISIYETPSF 336 (698)
T ss_pred EEecCCccccCcccCCCceEEEEEccccc-------hhcceeccCCCccccceEEeccCCceeEEeccc-eEEEEecCce
Confidence 9853 1458999999983 3333332 11122 346899999999987764 6999987664
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-----CCeEEEEECCCCcEEEEeccCCcc
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-----DNTAIMWDVHKGKNLGILTEHKKF 236 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-----dg~i~vwd~~~~~~~~~~~~~~~~ 236 (621)
..+ ..-.-.-..|....|+|.+++||.-.. -..+.+..+.+++.+++-+.+.-.
T Consensus 337 ~ll---------------------d~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVs 395 (698)
T KOG2314|consen 337 MLL---------------------DKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVS 395 (698)
T ss_pred eee---------------------cccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeee
Confidence 332 111223456889999999998886443 245778888888888777666554
Q ss_pred eEEEEEcCCCCEEEEEeC----------CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeee
Q psy15549 237 VQGVAWDPKNQYVATLSS----------DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLT 306 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 306 (621)
-..+-|-.+|.+|+.--. -..+.|+.++... .|+ ..-.++..|...+
T Consensus 396 DckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKd---------Ipv--------------e~velke~vi~Fa 452 (698)
T KOG2314|consen 396 DCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKD---------IPV--------------EVVELKESVIAFA 452 (698)
T ss_pred ccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccC---------CCc--------------eeeecchheeeee
Confidence 456778888998875321 1124444444322 111 1123455678899
Q ss_pred ecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEE
Q psy15549 307 FSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIA 386 (621)
Q Consensus 307 ~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (621)
|-|.|..+++.++.. ...++..|.+.. ....+.....-.....+.+.|+| .|+++++
T Consensus 453 WEP~gdkF~vi~g~~--~k~tvsfY~~e~-----~~~~~~lVk~~dk~~~N~vfwsP----------------kG~fvvv 509 (698)
T KOG2314|consen 453 WEPHGDKFAVISGNT--VKNTVSFYAVET-----NIKKPSLVKELDKKFANTVFWSP----------------KGRFVVV 509 (698)
T ss_pred eccCCCeEEEEEccc--cccceeEEEeec-----CCCchhhhhhhcccccceEEEcC----------------CCcEEEE
Confidence 999999988877521 233444444432 11111111112223344455555 7788877
Q ss_pred EE---cCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeC------CCcEEEEEecCCcCC
Q psy15549 387 VA---TENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASST------DGYCSIISFGDNEIG 447 (621)
Q Consensus 387 ~~---~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~------dg~i~iw~~~~~~~~ 447 (621)
++ ..|.+.+||+........-...| ...+.+.|.|.|+|++|++. |.-.+||++....+.
T Consensus 510 a~l~s~~g~l~F~D~~~a~~k~~~~~eh-~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqGrll~ 578 (698)
T KOG2314|consen 510 AALVSRRGDLEFYDTDYADLKDTASPEH-FAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQGRLLK 578 (698)
T ss_pred EEecccccceEEEecchhhhhhccCccc-cccccceECCCCCEEEEeeehhhhccccceEEEEeecHHHH
Confidence 65 46899999988533322221123 45788999999999999974 556788988855443
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.2e-12 Score=122.88 Aligned_cols=277 Identities=13% Similarity=0.120 Sum_probs=185.3
Q ss_pred cccCcEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccC--CCeEEEEECCCCCEEEEEeCCCcEE
Q psy15549 79 RHQKAVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQ--KAVNVVRFSPNGELLASGDDESTII 154 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~--~~V~~i~~sp~g~~l~s~s~dg~i~ 154 (621)
.|...-+.|..+|||+|+.+.+ .-.|++|++... ...+..|. ..|.-.-++.|-..++.--.|.+|.
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanL---------SLKFERhlDae~V~feiLsDD~SK~v~L~~DR~Ie 119 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANL---------SLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIE 119 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccc---------eeeeeecccccceeEEEeccchhhheEeecCceee
Confidence 4677888999999999987766 667999999864 22344443 2344444455555555555677776
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCC
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHK 234 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 234 (621)
+.......... .-...-..++++.-..-|++++....|+-++++.|..+..+....
T Consensus 120 fHak~G~hy~~------------------------RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~ 175 (703)
T KOG2321|consen 120 FHAKYGRHYRT------------------------RIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDS 175 (703)
T ss_pred ehhhcCeeeee------------------------ecCcCCccccccCCCccEEEeecCcceEEEEcccccccccccccc
Confidence 54322211110 011223455565433335555556789999999999999998888
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeE
Q psy15549 235 KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL 314 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l 314 (621)
+.+.++..++-..+|++|+.+|.|..||.+....+..+..... +... ........|+++.|+.+|-.+
T Consensus 176 ~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~-v~s~-----------pg~~~~~svTal~F~d~gL~~ 243 (703)
T KOG2321|consen 176 GELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASS-VNSH-----------PGGDAAPSVTALKFRDDGLHV 243 (703)
T ss_pred ccceeeeecCccceEEecccCceEEEecchhhhhheeeecccc-cCCC-----------ccccccCcceEEEecCCceeE
Confidence 9999999999999999999999999999999877766643221 0000 001112235666666655555
Q ss_pred EeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEE
Q psy15549 315 IAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNIL 394 (621)
Q Consensus 315 ~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 394 (621)
++ |..+|.++
T Consensus 244 aV----------------------------------------------------------------------Gts~G~v~ 253 (703)
T KOG2321|consen 244 AV----------------------------------------------------------------------GTSTGSVL 253 (703)
T ss_pred Ee----------------------------------------------------------------------eccCCcEE
Confidence 44 44789999
Q ss_pred EEeCCCCceeEEEecccccceEEEEEcCC--CCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccC
Q psy15549 395 LYDTQHASPFAFIANIHYTKLTDITWSSD--GKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSE 472 (621)
Q Consensus 395 iwd~~~~~~~~~~~~~h~~~v~~~~~spd--g~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 472 (621)
|||++..+++..-..+..-+|..+.|-+. +..|++. +...++|||-.+|+.+..+..... +....+.|++..+..+
T Consensus 254 iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt~~-lND~C~~p~sGm~f~A 331 (703)
T KOG2321|consen 254 IYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPTSD-LNDFCFVPGSGMFFTA 331 (703)
T ss_pred EEEcccCCceeecccCCccceeeecccccCCCceEEec-chHHhhhcccccCCceeeccccCC-cCceeeecCCceEEEe
Confidence 99999999988876556678999999776 3456655 557899999999988777655443 5555555655544444
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.9e-12 Score=118.88 Aligned_cols=214 Identities=14% Similarity=0.197 Sum_probs=156.5
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
..+|..++... + .|++|-.+|.+. +|....+..... ....+..+ ..+..|.-++.
T Consensus 105 ~~~I~gl~~~d-g------~Litc~~sG~l~--------------~~~~k~~d~hss---~l~~la~g-~g~~~~r~~~~ 159 (412)
T KOG3881|consen 105 TKSIKGLKLAD-G------TLITCVSSGNLQ--------------VRHDKSGDLHSS---KLIKLATG-PGLYDVRQTDT 159 (412)
T ss_pred cccccchhhcC-C------EEEEEecCCcEE--------------EEeccCCccccc---cceeeecC-CceeeeccCCC
Confidence 34555555543 3 789999999999 887775442211 11112222 56777777775
Q ss_pred CCE-EEEEc-C--CceEEEEeccCccccccceec-ccccc--cCCCeEEEEECCC--CCEEEEEeCCCcEEEEEccCCCC
Q psy15549 93 GEL-LASGD-D--VGKEIWYLTERESGIANVEFA-SDLSR--HQKAVNVVRFSPN--GELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 93 g~~-las~~-d--~~v~iw~~~~~~~~~~~~~~~-~~~~~--h~~~V~~i~~sp~--g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
... +|+|+ . +.+.||++.... .....+.+ ....+ -.-.++++.|-+. ...||+++.-+.+++||...++.
T Consensus 160 ~p~Iva~GGke~~n~lkiwdle~~~-qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRR 238 (412)
T KOG3881|consen 160 DPYIVATGGKENINELKIWDLEQSK-QIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRR 238 (412)
T ss_pred CCceEecCchhcccceeeeecccce-eeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCc
Confidence 554 45577 5 568999998762 11111110 01111 1235678889886 77999999999999999987654
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE-eccCCcceEEEEE
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI-LTEHKKFVQGVAW 242 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~v~~l~~ 242 (621)
. ...+.-...+++++...|+++++++|..-|.+..+|++.++.... +.+-.+.|+++..
T Consensus 239 P--------------------V~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~ 298 (412)
T KOG3881|consen 239 P--------------------VAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHC 298 (412)
T ss_pred c--------------------eeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEE
Confidence 2 345556678899999999999999999999999999999998877 7888999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeec
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
+|..++|++++-|..|||+|+.+.+++...
T Consensus 299 hp~~~~las~GLDRyvRIhD~ktrkll~kv 328 (412)
T KOG3881|consen 299 HPTHPVLASCGLDRYVRIHDIKTRKLLHKV 328 (412)
T ss_pred cCCCceEEeeccceeEEEeecccchhhhhh
Confidence 999999999999999999999997766544
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-10 Score=109.53 Aligned_cols=175 Identities=16% Similarity=0.232 Sum_probs=141.0
Q ss_pred Ecc-CCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC-cEEEEEccCCCCCCC
Q psy15549 89 FSP-NGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES-TIIVWKQKTDQDLPE 166 (621)
Q Consensus 89 ~sp-dg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg-~i~vwd~~~~~~~~~ 166 (621)
|++ +|.+++..+.+...|.+...+ ..+ -.+|.+.|.-..+..++.-++.|..|| .+-|+|.++++.
T Consensus 327 fa~~~Gd~ia~VSRGkaFi~~~~~~-------~~i--qv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~--- 394 (668)
T COG4946 327 FAVVNGDYIALVSRGKAFIMRPWDG-------YSI--QVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV--- 394 (668)
T ss_pred hccCCCcEEEEEecCcEEEECCCCC-------eeE--EcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE---
Confidence 554 799999999999888776654 212 236777898888888888899999999 899999998863
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCC
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKN 246 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~ 246 (621)
......-+.|.++..+|+|++++.+.....|.++|+.++.....-+...+-|+.+.|||++
T Consensus 395 -------------------kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~ns 455 (668)
T COG4946 395 -------------------KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNS 455 (668)
T ss_pred -------------------EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCc
Confidence 4556677889999999999999999999999999999998876666777889999999999
Q ss_pred CEEEEEeCCC----cEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 247 QYVATLSSDR----SLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 247 ~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
+++|-+--+| .|++||+..++........ +.-.+-+|.||+++|...+
T Consensus 456 r~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~t------------------------a~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 456 RWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPT------------------------AYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred eeEEEecCcceeeeeEEEEecCCCeEEEecCCc------------------------ccccCcccCCCCcEEEEEe
Confidence 9999776665 6999999988765543211 1114678999999998776
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-11 Score=111.73 Aligned_cols=242 Identities=16% Similarity=0.268 Sum_probs=140.4
Q ss_pred cCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccccc---------
Q psy15549 11 HNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ--------- 81 (621)
Q Consensus 11 ~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~--------- 81 (621)
.-.+-|.+|.|..+|. +||||..+|.|.+|.-..... . .+.....++.|.
T Consensus 23 teadiis~vef~~~Ge-----~LatGdkgGRVv~f~r~~~~~--------------~--ey~~~t~fqshepEFDYLkSl 81 (433)
T KOG1354|consen 23 TEADIISAVEFDHYGE-----RLATGDKGGRVVLFEREKLYK--------------G--EYNFQTEFQSHEPEFDYLKSL 81 (433)
T ss_pred chhcceeeEEeecccc-----eEeecCCCCeEEEeecccccc--------------c--ceeeeeeeeccCcccchhhhh
Confidence 3456799999999999 999999999998553322211 0 222233333333
Q ss_pred ---CcEEEEEEccCCC---EEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy15549 82 ---KAVNVVRFSPNGE---LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIV 155 (621)
Q Consensus 82 ---~~V~~l~~spdg~---~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~v 155 (621)
..|+.+.|.+++. +|+++.|.++++|.+.........+.... .+....|+++.. .+.+..|-.+..
T Consensus 82 eieEKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~--~~~~~~~~~lr~------p~~~~~~~~vea 153 (433)
T KOG1354|consen 82 EIEEKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPE--EGPPGTITSLRL------PVEGRHDLEVEA 153 (433)
T ss_pred hhhhhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccc--cCCCCccceeec------eeeccccceeee
Confidence 4688999998764 67788899999999987643211111110 111111222211 111111111100
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE---EEEecc
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN---LGILTE 232 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~---~~~~~~ 232 (621)
. +. ...-.+|.--|.++.++.|+..++++. |=.|.+|+++--.. +.-++.
T Consensus 154 ~------pr--------------------Rv~aNaHtyhiNSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP 206 (433)
T KOG1354|consen 154 S------PR--------------------RVYANAHTYHINSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKP 206 (433)
T ss_pred e------ee--------------------eeccccceeEeeeeeecCccceEeecc-ceeeeeccccccCCceeEEEccc
Confidence 0 00 011246888899999999999888876 77899999864322 222333
Q ss_pred C-----CcceEEEEEcCC-CCEEEEEeCCCcEEEEEccCceeeeec-ccCCCCCCCccccccccccccccCCcccceeee
Q psy15549 233 H-----KKFVQGVAWDPK-NQYVATLSSDRSLRTYSIQSKKVISRA-CRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL 305 (621)
Q Consensus 233 ~-----~~~v~~l~~sp~-~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 305 (621)
+ ..-|++..|+|. .+.|+-.++.|+|++-|++...+--.. .....+.... ........-..|..+
T Consensus 207 ~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~--------~rsffseiIsSISDv 278 (433)
T KOG1354|consen 207 ANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPS--------SRSFFSEIISSISDV 278 (433)
T ss_pred cCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCc--------chhhHHHHhhhhhce
Confidence 3 345888999995 467777888999999999854321100 0000000000 000111233457889
Q ss_pred eecCCCCeEEe
Q psy15549 306 TFSPDGQLLIA 316 (621)
Q Consensus 306 ~~spdg~~l~~ 316 (621)
.|+++|+|+++
T Consensus 279 KFs~sGryils 289 (433)
T KOG1354|consen 279 KFSHSGRYILS 289 (433)
T ss_pred EEccCCcEEEE
Confidence 99999999987
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-11 Score=125.25 Aligned_cols=224 Identities=17% Similarity=0.206 Sum_probs=140.3
Q ss_pred ccccccCCCeEEEEECCCCCEEEEEeCC---CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEE
Q psy15549 123 SDLSRHQKAVNVVRFSPNGELLASGDDE---STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDIS 199 (621)
Q Consensus 123 ~~~~~h~~~V~~i~~sp~g~~l~s~s~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 199 (621)
..+..+...+...+|+|||+.|+..+.+ ..|.+|++.++.. ..+....+.+....
T Consensus 192 ~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~----------------------~~l~~~~g~~~~~~ 249 (430)
T PRK00178 192 VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRR----------------------EQITNFEGLNGAPA 249 (430)
T ss_pred eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCE----------------------EEccCCCCCcCCeE
Confidence 3344567788999999999999876643 3688999987753 12222333455789
Q ss_pred ECCCCCEEEE-EeCCC--eEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeC-CC--cEEEEEccCceeeeecc
Q psy15549 200 WSPTSTHLIS-GSVDN--TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS-DR--SLRTYSIQSKKVISRAC 273 (621)
Q Consensus 200 ~spd~~~l~s-~~~dg--~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~ 273 (621)
|+|||+.|+. .+.+| .|++||+.++... .+..+........|+|||+.|+..+. +| .|.++++.+++......
T Consensus 250 ~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~ 328 (430)
T PRK00178 250 WSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTF 328 (430)
T ss_pred ECCCCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec
Confidence 9999998874 44444 6888899887653 45555555677899999998876654 33 47777776665322211
Q ss_pred cCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcc
Q psy15549 274 RSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQ 353 (621)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (621)
. ........|+|||++++..+. ..
T Consensus 329 ~------------------------~~~~~~~~~Spdg~~i~~~~~-----~~--------------------------- 352 (430)
T PRK00178 329 V------------------------GNYNARPRLSADGKTLVMVHR-----QD--------------------------- 352 (430)
T ss_pred C------------------------CCCccceEECCCCCEEEEEEc-----cC---------------------------
Confidence 0 001134689999998887551 00
Q ss_pred cceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCC
Q psy15549 354 YYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTD 433 (621)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~d 433 (621)
....|++||+.+++... +... .......|+|||++|+..+.+
T Consensus 353 -----------------------------------~~~~l~~~dl~tg~~~~-lt~~--~~~~~p~~spdg~~i~~~~~~ 394 (430)
T PRK00178 353 -----------------------------------GNFHVAAQDLQRGSVRI-LTDT--SLDESPSVAPNGTMLIYATRQ 394 (430)
T ss_pred -----------------------------------CceEEEEEECCCCCEEE-ccCC--CCCCCceECCCCCEEEEEEec
Confidence 11247788888776432 2221 222356899999998877643
Q ss_pred -C--cEEEEEecCCcCCcccCCCCCcccccCCCC
Q psy15549 434 -G--YCSIISFGDNEIGIPYVPPSGEESKENDPT 464 (621)
Q Consensus 434 -g--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (621)
| .|.++++. +...+.+..+.+.+....+++
T Consensus 395 ~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p~ws~ 427 (430)
T PRK00178 395 QGRGVLMLVSIN-GRVRLPLPTAQGEVREPSWSP 427 (430)
T ss_pred CCceEEEEEECC-CCceEECcCCCCCcCCCccCC
Confidence 3 45666664 333344544444444455544
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-11 Score=125.52 Aligned_cols=149 Identities=19% Similarity=0.221 Sum_probs=101.5
Q ss_pred ccccccCCCeEEEEECCCCCEEEEEeCC---CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEE
Q psy15549 123 SDLSRHQKAVNVVRFSPNGELLASGDDE---STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDIS 199 (621)
Q Consensus 123 ~~~~~h~~~V~~i~~sp~g~~l~s~s~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 199 (621)
+.+..+...+...+|+|+|++|+.+..+ ..|++||+.++.. ..+..+...+.+++
T Consensus 183 ~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~----------------------~~~~~~~~~~~~~~ 240 (417)
T TIGR02800 183 QTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQR----------------------EKVASFPGMNGAPA 240 (417)
T ss_pred EEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCE----------------------EEeecCCCCccceE
Confidence 3444566678899999999999987643 4799999987753 22334455567799
Q ss_pred ECCCCCEEEEE-eCCC--eEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCC-C--cEEEEEccCceeeeecc
Q psy15549 200 WSPTSTHLISG-SVDN--TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSD-R--SLRTYSIQSKKVISRAC 273 (621)
Q Consensus 200 ~spd~~~l~s~-~~dg--~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~~ 273 (621)
|+|||+.|+.. +.++ .|++||+.++... .+..+........|+|+|++|+..+.. + .|.++|+.+++... +.
T Consensus 241 ~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~-l~ 318 (417)
T TIGR02800 241 FSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT-RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRR-LT 318 (417)
T ss_pred ECCCCCEEEEEECCCCCccEEEEECCCCCEE-ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-ee
Confidence 99999877654 4443 5889999877643 444455555678999999998876653 3 57777776654322 11
Q ss_pred cCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 274 RSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
. .......+.|+|+|++++.++
T Consensus 319 ~-----------------------~~~~~~~~~~spdg~~i~~~~ 340 (417)
T TIGR02800 319 F-----------------------RGGYNASPSWSPDGDLIAFVH 340 (417)
T ss_pred c-----------------------CCCCccCeEECCCCCEEEEEE
Confidence 0 012235678999998888765
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.8e-11 Score=123.36 Aligned_cols=223 Identities=18% Similarity=0.157 Sum_probs=138.2
Q ss_pred cccccCCCeEEEEECCCCCEEEEEeCC-C--cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEE
Q psy15549 124 DLSRHQKAVNVVRFSPNGELLASGDDE-S--TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISW 200 (621)
Q Consensus 124 ~~~~h~~~V~~i~~sp~g~~l~s~s~d-g--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 200 (621)
.+..+...+....|+|||+.|+..+.+ + .|.+||+.+++.. .+...........|
T Consensus 212 ~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~----------------------~lt~~~g~~~~~~w 269 (448)
T PRK04792 212 MLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVRE----------------------KVTSFPGINGAPRF 269 (448)
T ss_pred EeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeE----------------------EecCCCCCcCCeeE
Confidence 344566788899999999988876532 2 5888898876531 11222223346899
Q ss_pred CCCCCEEEE-EeCCCe--EEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeC-CC--cEEEEEccCceeeeeccc
Q psy15549 201 SPTSTHLIS-GSVDNT--AIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS-DR--SLRTYSIQSKKVISRACR 274 (621)
Q Consensus 201 spd~~~l~s-~~~dg~--i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~ 274 (621)
+|||+.|+. .+.+|. |+++|+.+++. ..+..+.......+|+|||++|+..+. ++ .|.++|+.+++.......
T Consensus 270 SPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~ 348 (448)
T PRK04792 270 SPDGKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFE 348 (448)
T ss_pred CCCCCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecC
Confidence 999998875 455664 88889887765 444455556678899999999876654 34 466667766654322100
Q ss_pred CCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCccc
Q psy15549 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQY 354 (621)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (621)
.......+|+|||++|+..+. +.
T Consensus 349 ------------------------g~~~~~~~~SpDG~~l~~~~~-----~~---------------------------- 371 (448)
T PRK04792 349 ------------------------GEQNLGGSITPDGRSMIMVNR-----TN---------------------------- 371 (448)
T ss_pred ------------------------CCCCcCeeECCCCCEEEEEEe-----cC----------------------------
Confidence 001134689999999887551 00
Q ss_pred ceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeC-C
Q psy15549 355 YSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASST-D 433 (621)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~-d 433 (621)
....|.++|+.+++... +... .......|+|||+.|+..+. +
T Consensus 372 ----------------------------------g~~~I~~~dl~~g~~~~-lt~~--~~d~~ps~spdG~~I~~~~~~~ 414 (448)
T PRK04792 372 ----------------------------------GKFNIARQDLETGAMQV-LTST--RLDESPSVAPNGTMVIYSTTYQ 414 (448)
T ss_pred ----------------------------------CceEEEEEECCCCCeEE-ccCC--CCCCCceECCCCCEEEEEEecC
Confidence 11245566776665422 2121 12234589999998887654 3
Q ss_pred Cc--EEEEEecCCcCCcccCCCCCcccccCCCC
Q psy15549 434 GY--CSIISFGDNEIGIPYVPPSGEESKENDPT 464 (621)
Q Consensus 434 g~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (621)
|. +++++. +|.....+..+.+......|+|
T Consensus 415 g~~~l~~~~~-~G~~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 415 GKQVLAAVSI-DGRFKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred CceEEEEEEC-CCCceEECcCCCCCcCCCccCC
Confidence 43 666665 4555566665555555556654
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.8e-10 Score=110.72 Aligned_cols=242 Identities=15% Similarity=0.228 Sum_probs=149.9
Q ss_pred CCeEEEeccccccCCcceEEEEecC----CceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGA----DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~----dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
..-..|+++|+++ +|.+... +|.|. .|.+..... .++.+............+++
T Consensus 37 ~~Ps~l~~~~~~~-----~LY~~~e~~~~~g~v~--------------~~~i~~~~g---~L~~~~~~~~~g~~p~~i~~ 94 (345)
T PF10282_consen 37 ENPSWLAVSPDGR-----RLYVVNEGSGDSGGVS--------------SYRIDPDTG---TLTLLNSVPSGGSSPCHIAV 94 (345)
T ss_dssp SSECCEEE-TTSS-----EEEEEETTSSTTTEEE--------------EEEEETTTT---EEEEEEEEEESSSCEEEEEE
T ss_pred CCCceEEEEeCCC-----EEEEEEccccCCCCEE--------------EEEECCCcc---eeEEeeeeccCCCCcEEEEE
Confidence 3567788999998 7777655 57888 666665421 12223333334456678999
Q ss_pred ccCCCEEEEEc--CCceEEEEeccCccccccceecccc--------cccCCCeEEEEECCCCCEEEEEeC-CCcEEEEEc
Q psy15549 90 SPNGELLASGD--DVGKEIWYLTERESGIANVEFASDL--------SRHQKAVNVVRFSPNGELLASGDD-ESTIIVWKQ 158 (621)
Q Consensus 90 spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~--------~~h~~~V~~i~~sp~g~~l~s~s~-dg~i~vwd~ 158 (621)
+|++++|+++. ++.+.++++...+....... .... ..-.....++.|+|+|+++++... ...|.+|++
T Consensus 95 ~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~-~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~ 173 (345)
T PF10282_consen 95 DPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQ-TVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDI 173 (345)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTSEEEEEEE-EEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCEEEEEEccCCeEEEEEccCCcccceeee-ecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEE
Confidence 99999999986 78899999987532111100 1111 112245778999999998887643 347999999
Q ss_pred cCCCC-CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECC--CCcE--EEEecc
Q psy15549 159 KTDQD-LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVH--KGKN--LGILTE 232 (621)
Q Consensus 159 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~--~~~~--~~~~~~ 232 (621)
..... +.. ............+.+.|+|+++++++..+ ++.|.++++. ++.. +..+..
T Consensus 174 ~~~~~~l~~-----------------~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~ 236 (345)
T PF10282_consen 174 DDDTGKLTP-----------------VDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTIST 236 (345)
T ss_dssp -TTS-TEEE-----------------EEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEES
T ss_pred eCCCceEEE-----------------eeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeee
Confidence 77652 100 01112245566899999999998877665 7889999998 4422 222211
Q ss_pred ------CCcceEEEEEcCCCCEEEEEeC-CCcEEEEEccC--cee--eeecccCCCCCCCccccccccccccccCCcccc
Q psy15549 233 ------HKKFVQGVAWDPKNQYVATLSS-DRSLRTYSIQS--KKV--ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSF 301 (621)
Q Consensus 233 ------~~~~v~~l~~sp~~~~l~s~~~-dg~i~iwd~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (621)
.......++++|||++|+++.. .+.|.+|++.. +++ +..+.. ....
T Consensus 237 ~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~-----------------------~G~~ 293 (345)
T PF10282_consen 237 LPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPT-----------------------GGKF 293 (345)
T ss_dssp CETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEE-----------------------SSSS
T ss_pred ccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeC-----------------------CCCC
Confidence 1125778999999999887664 57899999942 332 111110 0112
Q ss_pred eeeeeecCCCCeEEecc
Q psy15549 302 FRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 302 i~~~~~spdg~~l~~~s 318 (621)
.+.++++|+|++|+++.
T Consensus 294 Pr~~~~s~~g~~l~Va~ 310 (345)
T PF10282_consen 294 PRHFAFSPDGRYLYVAN 310 (345)
T ss_dssp EEEEEE-TTSSEEEEEE
T ss_pred ccEEEEeCCCCEEEEEe
Confidence 47899999999988766
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.9e-11 Score=122.22 Aligned_cols=211 Identities=15% Similarity=0.133 Sum_probs=129.2
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
....+.+-+|||||++ ..++++...+|.-.|| +.++..++... +....+.....+|||
T Consensus 183 ~~~~~~sP~wSPDG~~--~~~~y~S~~~g~~~I~------------~~~l~~g~~~~--------lt~~~g~~~~p~wSP 240 (428)
T PRK01029 183 EHSLSITPTWMHIGSG--FPYLYVSYKLGVPKIF------------LGSLENPAGKK--------ILALQGNQLMPTFSP 240 (428)
T ss_pred CCCCcccceEccCCCc--eEEEEEEccCCCceEE------------EEECCCCCceE--------eecCCCCccceEECC
Confidence 4556778899999970 0022245555655544 66776654322 233344556789999
Q ss_pred CCCEEEEEcC--C--ce--EEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcEEEEEc--cCCC
Q psy15549 92 NGELLASGDD--V--GK--EIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTIIVWKQ--KTDQ 162 (621)
Q Consensus 92 dg~~las~~d--~--~v--~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~vwd~--~~~~ 162 (621)
||+.|+..++ + .+ .+|++..+... ........+.......+|+|||+.|+..+ .+|...+|.+ ....
T Consensus 241 DG~~Laf~s~~~g~~di~~~~~~~~~g~~g----~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g 316 (428)
T PRK01029 241 RKKLLAFISDRYGNPDLFIQSFSLETGAIG----KPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEG 316 (428)
T ss_pred CCCEEEEEECCCCCcceeEEEeecccCCCC----cceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccc
Confidence 9999987652 2 23 33555542110 11111222223446789999999888765 4665556644 3211
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEeccCCcceEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD---NTAIMWDVHKGKNLGILTEHKKFVQG 239 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~v~~ 239 (621)
.. ...+..+...+....|+|||+.|+..+.+ ..|.+||+.+++... +......+..
T Consensus 317 ~~--------------------~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~ 375 (428)
T PRK01029 317 QS--------------------PRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKES 375 (428)
T ss_pred cc--------------------eEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccc
Confidence 10 12333444567789999999998876543 479999998887644 3333445678
Q ss_pred EEEcCCCCEEEEEeC---CCcEEEEEccCceee
Q psy15549 240 VAWDPKNQYVATLSS---DRSLRTYSIQSKKVI 269 (621)
Q Consensus 240 l~~sp~~~~l~s~~~---dg~i~iwd~~~~~~~ 269 (621)
+.|+|||++|+..+. ...|.++|+.+++..
T Consensus 376 p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~ 408 (428)
T PRK01029 376 PSWAIDSLHLVYSAGNSNESELYLISLITKKTR 408 (428)
T ss_pred eEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence 999999998875543 346888888776543
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.2e-11 Score=110.06 Aligned_cols=234 Identities=18% Similarity=0.277 Sum_probs=169.0
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
..-+|.+.|++...-|..+ -+++.+.|..++ ||--.+..+... ........+++++
T Consensus 19 ~~eG~~d~vn~~~l~~~e~-----gv~~~s~drtvr--------------v~lkrds~q~wp-----sI~~~mP~~~~~~ 74 (404)
T KOG1409|consen 19 KIEGSQDDVNAAILIPKEE-----GVISVSEDRTVR--------------VWLKRDSGQYWP-----SIYHYMPSPCSAM 74 (404)
T ss_pred hhcCchhhhhhheeccCCC-----CeEEccccceee--------------eEEeccccccCc-----hhhhhCCCCceEe
Confidence 3456778899988889887 999999999999 775443322111 1122345789999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
.+.++.+.|+.|- .+.+.-+.+...- ......+....|...|..+-|+-....+++++.|..+.-.-.+.+..+..
T Consensus 75 ~y~~e~~~L~vg~~ngtvtefs~sedf---nkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~ 151 (404)
T KOG1409|consen 75 EYVSESRRLYVGQDNGTVTEFALSEDF---NKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGG 151 (404)
T ss_pred eeeccceEEEEEEecceEEEEEhhhhh---hhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccc
Confidence 9999999999988 5556555544321 12355667778999999999998888999999988766444444444332
Q ss_pred CCCC------Cc--------------ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc-
Q psy15549 167 FPSS------NL--------------DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK- 225 (621)
Q Consensus 167 ~~~~------~~--------------~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~- 225 (621)
+--. .. ..-........+...+.+|...+++++|.+...+|++|..|..+.+||+.-++
T Consensus 152 Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g 231 (404)
T KOG1409|consen 152 YNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKG 231 (404)
T ss_pred eEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcc
Confidence 2100 00 00001112233456778999999999999999999999999999999996543
Q ss_pred EEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCcee
Q psy15549 226 NLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV 268 (621)
Q Consensus 226 ~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 268 (621)
....+.+|...|..+...+.-+.|.+++.||.|.+|++.....
T Consensus 232 ~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~ 274 (404)
T KOG1409|consen 232 TAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRV 274 (404)
T ss_pred eeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceee
Confidence 3456778999999999988889999999999999999976543
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.2e-11 Score=119.38 Aligned_cols=192 Identities=18% Similarity=0.139 Sum_probs=114.4
Q ss_pred cccccCcEEEEEEccCCCE--EE-EEc-CCc--eEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-
Q psy15549 77 LSRHQKAVNVVRFSPNGEL--LA-SGD-DVG--KEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD- 149 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~--la-s~~-d~~--v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~- 149 (621)
+......+.+-+|||||+. ++ +.. ++. |.+.++..+.. ..+.. ..+.....+|+|||+.|+..+.
T Consensus 180 lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~-----~~lt~---~~g~~~~p~wSPDG~~Laf~s~~ 251 (428)
T PRK01029 180 LTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAG-----KKILA---LQGNQLMPTFSPRKKLLAFISDR 251 (428)
T ss_pred cccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCc-----eEeec---CCCCccceEECCCCCEEEEEECC
Confidence 3444556778899999975 32 222 333 45555554421 22222 3344556899999998887653
Q ss_pred CC----cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEE--ECC
Q psy15549 150 ES----TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMW--DVH 222 (621)
Q Consensus 150 dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vw--d~~ 222 (621)
+| .+.+|++..+..-. .......+.......+|+|||+.|+..+ .+|...+| ++.
T Consensus 252 ~g~~di~~~~~~~~~g~~g~------------------~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~ 313 (428)
T PRK01029 252 YGNPDLFIQSFSLETGAIGK------------------PRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQID 313 (428)
T ss_pred CCCcceeEEEeecccCCCCc------------------ceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECc
Confidence 22 34446665431100 0122222233446789999999888765 45654444 543
Q ss_pred C-CcEEEEeccCCcceEEEEEcCCCCEEEEEeCC---CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCc
Q psy15549 223 K-GKNLGILTEHKKFVQGVAWDPKNQYVATLSSD---RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298 (621)
Q Consensus 223 ~-~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (621)
. +.....+..+...+....|+|||++|+..+.+ ..|.+||+.+++...... .
T Consensus 314 ~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~-~----------------------- 369 (428)
T PRK01029 314 PEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTT-S----------------------- 369 (428)
T ss_pred ccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccC-C-----------------------
Confidence 2 23344454455567789999999999876653 368999998876533221 0
Q ss_pred ccceeeeeecCCCCeEEecc
Q psy15549 299 KSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 299 ~~~i~~~~~spdg~~l~~~s 318 (621)
...+....|+|||+.|+..+
T Consensus 370 ~~~~~~p~wSpDG~~L~f~~ 389 (428)
T PRK01029 370 PENKESPSWAIDSLHLVYSA 389 (428)
T ss_pred CCCccceEECCCCCEEEEEE
Confidence 11235689999999888654
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.4e-10 Score=102.65 Aligned_cols=288 Identities=11% Similarity=0.142 Sum_probs=179.1
Q ss_pred CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC---CCcEEEEEccCC-CCCCCCCCCCccccc
Q psy15549 101 DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD---ESTIIVWKQKTD-QDLPEFPSSNLDEEN 176 (621)
Q Consensus 101 d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~---dg~i~vwd~~~~-~~~~~~~~~~~~~~~ 176 (621)
+.+|.+|++........ ...+..+.+.++-++|+|++++|.++-. +|.|.-|.++.. ..+..
T Consensus 15 s~gI~v~~ld~~~g~l~----~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~---------- 80 (346)
T COG2706 15 SQGIYVFNLDTKTGELS----LLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTF---------- 80 (346)
T ss_pred CCceEEEEEeCcccccc----hhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEE----------
Confidence 67899999996544322 2223456678899999999999988764 467888877753 11111
Q ss_pred ccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCC-CcEEE--EeccCCcc----------eEEEEE
Q psy15549 177 VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHK-GKNLG--ILTEHKKF----------VQGVAW 242 (621)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~-~~~~~--~~~~~~~~----------v~~l~~ 242 (621)
.........+-+.++++++|++|+++.. .|.|.++-++. |.... .+..|.+. +....+
T Consensus 81 --------ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~ 152 (346)
T COG2706 81 --------LNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANF 152 (346)
T ss_pred --------eeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeee
Confidence 1111122233388999999999998876 58999999865 33211 12234444 788899
Q ss_pred cCCCCEEEEEeC-CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccc
Q psy15549 243 DPKNQYVATLSS-DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCL 321 (621)
Q Consensus 243 sp~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~ 321 (621)
.|++++|++..- -..|.+|++..+.+...-.. .. .....-+.|.|+|++++.++.+.
T Consensus 153 tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~-~v-------------------~~G~GPRHi~FHpn~k~aY~v~E-- 210 (346)
T COG2706 153 TPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPA-EV-------------------KPGAGPRHIVFHPNGKYAYLVNE-- 210 (346)
T ss_pred CCCCCEEEEeecCCceEEEEEcccCcccccccc-cc-------------------CCCCCcceEEEcCCCcEEEEEec--
Confidence 999999987754 24689999987765332210 00 12233478999999999988875
Q ss_pred cCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc-CCcEEEEeCCC
Q psy15549 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT-ENNILLYDTQH 400 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~ 400 (621)
-+++|.+|........- ..+..+..-|.-|...........+++|++|.++.. ...|.+|.+..
T Consensus 211 --L~stV~v~~y~~~~g~~-------------~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~ 275 (346)
T COG2706 211 --LNSTVDVLEYNPAVGKF-------------EELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDP 275 (346)
T ss_pred --cCCEEEEEEEcCCCceE-------------EEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 67788888765421000 001111122222222222223334457788777764 34788887655
Q ss_pred Cc-eeEEE--ecccccceEEEEEcCCCCeEEEEeCC-CcEEEEEec--CCcCC
Q psy15549 401 AS-PFAFI--ANIHYTKLTDITWSSDGKVLIASSTD-GYCSIISFG--DNEIG 447 (621)
Q Consensus 401 ~~-~~~~~--~~~h~~~v~~~~~spdg~~l~s~s~d-g~i~iw~~~--~~~~~ 447 (621)
.. .+... ...+........|+++|++|+++..+ ..|.+|..+ +|++.
T Consensus 276 ~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~ 328 (346)
T COG2706 276 DGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLT 328 (346)
T ss_pred CCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEE
Confidence 32 12221 11344457899999999999988743 568999877 45443
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.4e-11 Score=121.39 Aligned_cols=199 Identities=17% Similarity=0.224 Sum_probs=132.5
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCC---ceEEeeeccCccccccceeEEeccccccccceeeccccccccC
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGAD---SHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK 82 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~d---g~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~ 82 (621)
++.+..+...+.+.+|+|||+ +|+.+..+ ..|. +|++.++.... +..+.+
T Consensus 182 ~~~l~~~~~~~~~p~~Spdg~-----~la~~~~~~~~~~i~--------------v~d~~~g~~~~--------~~~~~~ 234 (417)
T TIGR02800 182 PQTITRSREPILSPAWSPDGQ-----KLAYVSFESGKPEIY--------------VQDLATGQREK--------VASFPG 234 (417)
T ss_pred CEEeecCCCceecccCCCCCC-----EEEEEEcCCCCcEEE--------------EEECCCCCEEE--------eecCCC
Confidence 344555666799999999998 88876543 3565 88887654321 233455
Q ss_pred cEEEEEEccCCCEEEEE-c-CC--ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CC--cEEE
Q psy15549 83 AVNVVRFSPNGELLASG-D-DV--GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-ES--TIIV 155 (621)
Q Consensus 83 ~V~~l~~spdg~~las~-~-d~--~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg--~i~v 155 (621)
.+.+++|+|||+.|+.. + ++ .+.+|++..+. ...+..+........|+|+|+.|+.++. ++ .|.+
T Consensus 235 ~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~ 306 (417)
T TIGR02800 235 MNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ--------LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYM 306 (417)
T ss_pred CccceEECCCCCEEEEEECCCCCccEEEEECCCCC--------EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEE
Confidence 67789999999987754 3 33 46777766542 2223344445567799999998877654 33 5777
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC---eEEEEECCCCcEEEEecc
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN---TAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~ 232 (621)
+++.+++. ..+..+...+..+.|+|+|++|+.++.++ .|.+||+.++... .+..
T Consensus 307 ~d~~~~~~----------------------~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~ 363 (417)
T TIGR02800 307 MDADGGEV----------------------RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTD 363 (417)
T ss_pred EECCCCCE----------------------EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccC
Confidence 77765542 22333455677889999999999888775 8999999876543 3332
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCC---cEEEEEc
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDR---SLRTYSI 263 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg---~i~iwd~ 263 (621)
. .......|+|+|++|+..+.++ .+.+.+.
T Consensus 364 ~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~ 396 (417)
T TIGR02800 364 T-GLDESPSFAPNGRMILYATTRGGRGVLGLVST 396 (417)
T ss_pred C-CCCCCceECCCCCEEEEEEeCCCcEEEEEEEC
Confidence 2 2345678999999988877654 3555554
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=8.1e-11 Score=120.07 Aligned_cols=208 Identities=15% Similarity=0.150 Sum_probs=126.4
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecC-CceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGA-DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~-dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
+.+..+...+.+.+|||||+ .|+..+. ++...+| +||+.+++... +..+ .+...
T Consensus 211 ~~l~~~~~~~~~p~wSPDG~-----~La~~s~~~g~~~L~------------~~dl~tg~~~~-----lt~~---~g~~~ 265 (448)
T PRK04792 211 QMLLRSPEPLMSPAWSPDGR-----KLAYVSFENRKAEIF------------VQDIYTQVREK-----VTSF---PGING 265 (448)
T ss_pred eEeecCCCcccCceECCCCC-----EEEEEEecCCCcEEE------------EEECCCCCeEE-----ecCC---CCCcC
Confidence 34445566888999999998 7776543 4444444 78877654311 1122 23345
Q ss_pred EEEEccCCCEEEEEc--CCc--eEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CC--cEEEEEc
Q psy15549 86 VVRFSPNGELLASGD--DVG--KEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-ES--TIIVWKQ 158 (621)
Q Consensus 86 ~l~~spdg~~las~~--d~~--v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg--~i~vwd~ 158 (621)
..+|+|||+.|+... ++. |.++++..+. ...+..+.......+|+|||+.|+..+. ++ .|.++|+
T Consensus 266 ~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~--------~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl 337 (448)
T PRK04792 266 APRFSPDGKKLALVLSKDGQPEIYVVDIATKA--------LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNL 337 (448)
T ss_pred CeeECCCCCEEEEEEeCCCCeEEEEEECCCCC--------eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 789999999887643 444 5555655431 2334445556678899999998876653 34 4556666
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-C--eEEEEECCCCcEEEEeccCCc
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD-N--TAIMWDVHKGKNLGILTEHKK 235 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d-g--~i~vwd~~~~~~~~~~~~~~~ 235 (621)
.+++. ..+..........+|+|||++|+..+.+ + .|.++|+.+++.. .+... .
T Consensus 338 ~~g~~----------------------~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~-~ 393 (448)
T PRK04792 338 ASGKV----------------------SRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTST-R 393 (448)
T ss_pred CCCCE----------------------EEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCC-C
Confidence 65542 1111122223457899999998876653 3 5666788777653 33322 1
Q ss_pred ceEEEEEcCCCCEEEEEeCC-C--cEEEEEccCceeeeec
Q psy15549 236 FVQGVAWDPKNQYVATLSSD-R--SLRTYSIQSKKVISRA 272 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~ 272 (621)
......|+|+|+.|+..+.+ + .+.+++. ++.....+
T Consensus 394 ~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l 432 (448)
T PRK04792 394 LDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARL 432 (448)
T ss_pred CCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEEC
Confidence 22345899999998766543 3 3666776 44444433
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-10 Score=117.97 Aligned_cols=202 Identities=16% Similarity=0.105 Sum_probs=127.7
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecC-CceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGA-DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~-dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
+.....+.+.+...+|+|||+ .|+..+. ++.-.+| +|++.++.... +....+.+
T Consensus 191 ~~~l~~~~~~~~~p~wSpDG~-----~la~~s~~~~~~~l~------------~~~l~~g~~~~--------l~~~~g~~ 245 (430)
T PRK00178 191 AVTLLQSREPILSPRWSPDGK-----RIAYVSFEQKRPRIF------------VQNLDTGRREQ--------ITNFEGLN 245 (430)
T ss_pred ceEEecCCCceeeeeECCCCC-----EEEEEEcCCCCCEEE------------EEECCCCCEEE--------ccCCCCCc
Confidence 344556677899999999998 7776543 3333333 88887664321 22223445
Q ss_pred EEEEEccCCCEEEEEc--CC--ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CC--cEEEEE
Q psy15549 85 NVVRFSPNGELLASGD--DV--GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-ES--TIIVWK 157 (621)
Q Consensus 85 ~~l~~spdg~~las~~--d~--~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg--~i~vwd 157 (621)
...+|+|||+.|+... ++ .+.+|++..+. ...+..+........|+|||+.|+..+. +| .|.+++
T Consensus 246 ~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~--------~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d 317 (430)
T PRK00178 246 GAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQ--------LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVN 317 (430)
T ss_pred CCeEECCCCCEEEEEEccCCCceEEEEECCCCC--------eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence 5789999999887543 33 36666766542 2234445555667899999998876653 33 577777
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-C--eEEEEECCCCcEEEEeccCC
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD-N--TAIMWDVHKGKNLGILTEHK 234 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d-g--~i~vwd~~~~~~~~~~~~~~ 234 (621)
+.+++.. .+...........|+|||+.|+..+.+ + .|.+||+.+++.. .+.. .
T Consensus 318 ~~~g~~~----------------------~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~-~ 373 (430)
T PRK00178 318 VNGGRAE----------------------RVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTD-T 373 (430)
T ss_pred CCCCCEE----------------------EeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccC-C
Confidence 7666421 111111223457899999999877653 2 5889999887653 3322 2
Q ss_pred cceEEEEEcCCCCEEEEEeCC-C--cEEEEEcc
Q psy15549 235 KFVQGVAWDPKNQYVATLSSD-R--SLRTYSIQ 264 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~d-g--~i~iwd~~ 264 (621)
.......|+|+|+.++..+.+ + .|.++++.
T Consensus 374 ~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~ 406 (430)
T PRK00178 374 SLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN 406 (430)
T ss_pred CCCCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence 223356899999998876654 3 46666664
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.5e-09 Score=101.66 Aligned_cols=286 Identities=12% Similarity=-0.001 Sum_probs=160.9
Q ss_pred CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC----------CCcEEEEEccCCCCCCCCCCCC
Q psy15549 102 VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD----------ESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 102 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~----------dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
+.|.+.|.... +.+..+.....+- .+ ++||++.|+.+.. +..|.+||..+.+.+..++.+.
T Consensus 27 ~~v~ViD~~~~-------~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~ 97 (352)
T TIGR02658 27 TQVYTIDGEAG-------RVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPE 97 (352)
T ss_pred ceEEEEECCCC-------EEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCC
Confidence 67888888775 4444444333222 24 9999998877654 7799999999998765442110
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC--CCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEE
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV--DNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYV 249 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 249 (621)
. -..........++++|||++|++... +..|.++|+.+++.+..+.-.. ...-+..+++.. +
T Consensus 98 ~--------------p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~-~~~vy~t~e~~~-~ 161 (352)
T TIGR02658 98 G--------------PRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD-CYHIFPTANDTF-F 161 (352)
T ss_pred C--------------chhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC-CcEEEEecCCcc-E
Confidence 0 00001233457899999999998763 6899999999999988875422 222222322222 2
Q ss_pred EEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC-CCCeEEeccccccCCCCCC
Q psy15549 250 ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP-DGQLLIAPSGCLENSDSTR 328 (621)
Q Consensus 250 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-dg~~l~~~s~~~~~~d~~i 328 (621)
.-+.||......+.+......- ..++.. ....+++ ..-.|++ +|+++.+.. . +.+
T Consensus 162 -~~~~Dg~~~~v~~d~~g~~~~~---~~~vf~-----~~~~~v~---------~rP~~~~~dg~~~~vs~-----e-G~V 217 (352)
T TIGR02658 162 -MHCRDGSLAKVGYGTKGNPKIK---PTEVFH-----PEDEYLI---------NHPAYSNKSGRLVWPTY-----T-GKI 217 (352)
T ss_pred -EEeecCceEEEEecCCCceEEe---eeeeec-----CCccccc---------cCCceEcCCCcEEEEec-----C-CeE
Confidence 2234555544444322111100 000000 0000111 1114455 787777665 3 777
Q ss_pred cceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCC-CCccCCCcEEEEEE----------cCCcEEEEe
Q psy15549 329 KPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDK-PLFKLPYRIVIAVA----------TENNILLYD 397 (621)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~----------~dg~i~iwd 397 (621)
.+.++....... ..+...+.... ..-.|.| .+.. ..+.++++.+++.. ..+.|.++|
T Consensus 218 ~~id~~~~~~~~--~~~~~~~~~~~---~~~~wrP-------~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD 285 (352)
T TIGR02658 218 FQIDLSSGDAKF--LPAIEAFTEAE---KADGWRP-------GGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVD 285 (352)
T ss_pred EEEecCCCccee--cceeeeccccc---cccccCC-------CcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEE
Confidence 776642110000 00000000000 0000111 1100 11222556666532 225899999
Q ss_pred CCCCceeEEEecccccceEEEEEcCCCC-eEEEEe-CCCcEEEEEecCCcCCccc
Q psy15549 398 TQHASPFAFIANIHYTKLTDITWSSDGK-VLIASS-TDGYCSIISFGDNEIGIPY 450 (621)
Q Consensus 398 ~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~s-~dg~i~iw~~~~~~~~~~~ 450 (621)
..+++.+..+..+ ..+..++++|||+ +|++.+ .++.|.++|..+++.+..+
T Consensus 286 ~~t~kvi~~i~vG--~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 286 AKTGKRLRKIELG--HEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred CCCCeEEEEEeCC--CceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 9999999998754 4789999999999 777666 6788999999999887776
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.6e-10 Score=110.96 Aligned_cols=441 Identities=11% Similarity=0.049 Sum_probs=246.7
Q ss_pred CccccceeeecCCCCeEEEeccccccC-------CcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceee
Q psy15549 1 MKCTIPEISWHNRDPVLSVDIQLKQEK-------DNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEF 73 (621)
Q Consensus 1 m~~~~~~~~~~h~~~v~~l~~spd~~~-------~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~ 73 (621)
|+++..+..-+|+..|+.+.|.|-.-+ .-+.+||++...|.|. +||+..+.....
T Consensus 43 ~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIi--------------l~d~~~~s~~~~---- 104 (1062)
T KOG1912|consen 43 RSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRII--------------LVDFVLASVINW---- 104 (1062)
T ss_pred hhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEE--------------EEEehhhhhhhh----
Confidence 456777888889999999999885321 1346888999999999 888887765444
Q ss_pred ccccccccCcEEEEEEcc---CC-CEEEE-EcCCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEE
Q psy15549 74 ASDLSRHQKAVNVVRFSP---NG-ELLAS-GDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASG 147 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~sp---dg-~~las-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~ 147 (621)
+..|.++|..++|-+ +. .+|++ -+...+.+|+..++ +.............|+.+.| |.+.+..-
T Consensus 105 ---l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG-------~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l 174 (1062)
T KOG1912|consen 105 ---LSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTG-------EKFWKYDYSHEILSCFRVDPFDSRHFCVL 174 (1062)
T ss_pred ---hcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCC-------ceeeccccCCcceeeeeeCCCCcceEEEE
Confidence 788899999999976 33 33443 45888999999988 44554444556677799998 66666666
Q ss_pred eCCCcEEEEEccCCCCCCCCCCCCcccccc--cccceee-eeeecCCC---C------CeEEEEECCCCCEEEEEeCCCe
Q psy15549 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENV--NKEHWIV-TKILRGHL---E------DVYDISWSPTSTHLISGSVDNT 215 (621)
Q Consensus 148 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~---~------~v~~i~~spd~~~l~s~~~dg~ 215 (621)
+..|.+.+-+.-....... +...+..... .-.+.+. ...-..+. . ....++|+|.-+.++.......
T Consensus 175 ~s~g~vl~~~~l~~sep~~-pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~pre 253 (1062)
T KOG1912|consen 175 GSKGFVLSCKDLGLSEPDV-PGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRE 253 (1062)
T ss_pred ccCceEEEEeccCCCCCCC-CceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccc
Confidence 6677777766433322110 0000000000 0000000 00000000 0 1223567886655555566778
Q ss_pred EEEEECCCCcEEEEeccCCcceEEEEEcCCCC--EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccccccc
Q psy15549 216 AIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ--YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLF 293 (621)
Q Consensus 216 i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (621)
+.++|++-..++....-..+.+.-+.+-|+++ .|++...||.+.+|-.+.................+. .....
T Consensus 254 llv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~-----Q~~~v 328 (1062)
T KOG1912|consen 254 LLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGE-----QVHVV 328 (1062)
T ss_pred eEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhcccccc-----ceEEE
Confidence 99999998888887766666677788888764 588889999999997654221111100000000000 00000
Q ss_pred -ccCCcccceeeeeecCC-CCeEEeccccccCCCCCCcceeeeeeeeecccC-------CC-----------------ce
Q psy15549 294 -HDDTMKSFFRRLTFSPD-GQLLIAPSGCLENSDSTRKPISVTHVFTRACLN-------KP-----------------AV 347 (621)
Q Consensus 294 -~~~~~~~~i~~~~~spd-g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~-------~~-----------------~~ 347 (621)
..+. -.+...+..|. ...+++.- .++...+|.+.......... .+ ..
T Consensus 329 r~m~~--~rp~~~~~cPs~~sa~avl~-----s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS 401 (1062)
T KOG1912|consen 329 RPMEE--FRPVIGASCPSTPSALAVLY-----SSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLS 401 (1062)
T ss_pred eechh--cccceeecCCCChhhhhhhh-----hcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchh
Confidence 0000 00111222232 22222222 45556666554211000000 00 00
Q ss_pred ecCCcccceeeeeccce----eeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCC
Q psy15549 348 CLPSLQYYSVAVKCCPV----LFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSD 423 (621)
Q Consensus 348 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spd 423 (621)
...+|.....+....|. +..-.+.++.+. ..-..++.|.+.|+|.++|+.++.....+ ..|...|.++.|--.
T Consensus 402 ~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~--~~~pLvAvGT~sGTV~vvdvst~~v~~~f-svht~~VkgleW~g~ 478 (1062)
T KOG1912|consen 402 DDGSHSSGSTCVRMRPMPELTKVENDPGGNTPA--GTVPLVAVGTNSGTVDVVDVSTNAVAASF-SVHTSLVKGLEWLGN 478 (1062)
T ss_pred hcCCCCCCceeeecccCcccceeecCCCCCccc--eeeeeEEeecCCceEEEEEecchhhhhhh-cccccceeeeeeccc
Confidence 01112222222222221 000000000000 01135677778999999999999877777 469999999999766
Q ss_pred CCeEEEE---------eCCCcEEEEEecCCcCCc--ccCC-CCCcccccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 424 GKVLIAS---------STDGYCSIISFGDNEIGI--PYVP-PSGEESKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 424 g~~l~s~---------s~dg~i~iw~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
.+++-.+ +.-+.+.+-|+.+|.-.. .+.. ....+..+..+..+..++..=.+..+.+|++.+
T Consensus 479 sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt 552 (1062)
T KOG1912|consen 479 SSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKT 552 (1062)
T ss_pred eeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecccCceEEEEecccchHHHhhcc
Confidence 5433322 122457788888885332 2223 455677788888999998888899999999854
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=6e-10 Score=107.55 Aligned_cols=332 Identities=14% Similarity=0.160 Sum_probs=205.9
Q ss_pred CcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEE-----eC-----CC
Q psy15549 82 KAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG-----DD-----ES 151 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~-----s~-----dg 151 (621)
..++..++|++|+++|.+.+..+.|++..... .+... ....+.++.|+|.|.+|.+- .. .-
T Consensus 35 ~~~~v~~~S~~G~lfA~~~~~~v~i~~~~~~~-------~~lt~--~~~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~p 105 (566)
T KOG2315|consen 35 RPCNVFAYSNNGRLFAYSDNQVVKVFEIATLK-------VVLCV--ELKKTYDLLFSPKGNYLLTWEPWAIYGPKNASNP 105 (566)
T ss_pred CcceeEEEcCCCcEEEEEcCCeEEEEEccCCc-------EEEEe--ccceeeeeeecccccccccccccccccCCCCCCC
Confidence 34778889999999999999999999988763 11111 12268899999999998872 11 23
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 231 (621)
.+.+|++.++.....+ ....... ++..|+.|..+ ++--..+.+++|++...+.+. -.
T Consensus 106 n~~v~~vet~~~~s~~--------------------q~k~Q~~-W~~qfs~dEsl-~arlv~nev~f~~~~~f~~~~-~k 162 (566)
T KOG2315|consen 106 NVLVYNVETGVQRSQI--------------------QKKMQNG-WVPQFSIDESL-AARLVSNEVQFYDLGSFKTIQ-HK 162 (566)
T ss_pred ceeeeeeccceehhhe--------------------ehhhhcC-cccccccchhh-hhhhhcceEEEEecCCcccee-ee
Confidence 5779999885443222 1122222 68999988753 333345789999997744332 23
Q ss_pred cCCcceEEEEEcCCC--CEEEE-----EeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceee
Q psy15549 232 EHKKFVQGVAWDPKN--QYVAT-----LSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~--~~l~s-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 304 (621)
-|...|..+.+||.+ ..+|+ .+.-+.|+||.......-..+... ..| +..=..
T Consensus 163 l~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~k---------------sFF-----kadkvq 222 (566)
T KOG2315|consen 163 LSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANK---------------SFF-----KADKVQ 222 (566)
T ss_pred eeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhc---------------ccc-----ccceeE
Confidence 467789999999974 33442 344567999987632221111000 000 011145
Q ss_pred eeecCCCCeEEec-cccccCCCCCCcceeeee-eeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCc
Q psy15549 305 LTFSPDGQLLIAP-SGCLENSDSTRKPISVTH-VFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYR 382 (621)
Q Consensus 305 ~~~spdg~~l~~~-s~~~~~~d~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (621)
+.|.+-|.-|++. +.. .|.+-.-|.-.. ++-..........--...++|.++.|+| +++
T Consensus 223 m~WN~~gt~LLvLastd---VDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~----------------s~~ 283 (566)
T KOG2315|consen 223 MKWNKLGTALLVLASTD---VDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSP----------------SGR 283 (566)
T ss_pred EEeccCCceEEEEEEEe---ecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECC----------------CCC
Confidence 7888887644432 211 222222221110 0000001112222223367788888887 455
Q ss_pred EEEEEE--cCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeC---CCcEEEEEecCCcCCcccCCCCCcc
Q psy15549 383 IVIAVA--TENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASST---DGYCSIISFGDNEIGIPYVPPSGEE 457 (621)
Q Consensus 383 ~l~~~~--~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~---dg~i~iw~~~~~~~~~~~~~~~~~~ 457 (621)
.++++. .-..+.|||++ +.++..+ -.++-+++-|+|.|++|+.++- -|.|-|||+.+.+++..+.... .
T Consensus 284 EF~VvyGfMPAkvtifnlr-~~~v~df---~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--t 357 (566)
T KOG2315|consen 284 EFAVVYGFMPAKVTIFNLR-GKPVFDF---PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN--T 357 (566)
T ss_pred EEEEEEecccceEEEEcCC-CCEeEeC---CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC--c
Confidence 554444 35689999976 4455544 3457789999999999998874 4899999999988877776543 4
Q ss_pred cccCCCCCCCCcccCC------CcccHHHhcccCccccc
Q psy15549 458 SKENDPTKGEPVRSED------KPRSAEQAKGEGKVLGE 490 (621)
Q Consensus 458 ~~~~~~~~~~~~~s~~------~~~~~~~w~~~~~~~~~ 490 (621)
+...|+|||+.+.++. .|..+++|...|..+-.
T Consensus 358 t~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~~ 396 (566)
T KOG2315|consen 358 TVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLHE 396 (566)
T ss_pred eEEEEcCCCcEEEEEeccccEEecCCeEEEEecCceeeh
Confidence 4568999999777663 46778889988876543
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.8e-10 Score=106.85 Aligned_cols=327 Identities=15% Similarity=0.134 Sum_probs=208.2
Q ss_pred cccccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC------
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE------ 150 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d------ 150 (621)
+..-.-++..++|||.|++|++....+|.+|.-.... .+..+ ....|..+.|+|+++||.+-+..
T Consensus 28 ~~~~~~p~~~~~~SP~G~~l~~~~~~~V~~~~g~~~~-------~l~~~--~~~~V~~~~fSP~~kYL~tw~~~pi~~pe 98 (561)
T COG5354 28 FESENWPVAYVSESPLGTYLFSEHAAGVECWGGPSKA-------KLVRF--RHPDVKYLDFSPNEKYLVTWSREPIIEPE 98 (561)
T ss_pred ccccCcchhheeecCcchheehhhccceEEccccchh-------heeee--ecCCceecccCcccceeeeeccCCccChh
Confidence 3335568899999999999999999999999887652 12222 22468899999999999986543
Q ss_pred ---------CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCC--eE-EEEECCCCCEEEEEeCCCeEEE
Q psy15549 151 ---------STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLED--VY-DISWSPTSTHLISGSVDNTAIM 218 (621)
Q Consensus 151 ---------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~-~i~~spd~~~l~s~~~dg~i~v 218 (621)
..+.+||+.++..+..+. ....+ .+ -+.|+-+.+++|-. ....++|
T Consensus 99 ~e~sp~~~~n~~~vwd~~sg~iv~sf~---------------------~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i 156 (561)
T COG5354 99 IEISPFTSKNNVFVWDIASGMIVFSFN---------------------GISQPYLGWPVLKFSIDDKYVARV-VGSSLYI 156 (561)
T ss_pred hccCCccccCceeEEeccCceeEeecc---------------------ccCCcccccceeeeeecchhhhhh-ccCeEEE
Confidence 359999999998765442 22222 33 67888887776654 3457999
Q ss_pred EECCCCcEE-EEecc-CCcceEEEEEcCCCC--EEEE-----EeCCCcEEEEEccCceeeeecccCCCCCCCcccccccc
Q psy15549 219 WDVHKGKNL-GILTE-HKKFVQGVAWDPKNQ--YVAT-----LSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKV 289 (621)
Q Consensus 219 wd~~~~~~~-~~~~~-~~~~v~~l~~sp~~~--~l~s-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (621)
+++ ++... ..+.. ....|....|+|.++ .|+. .+.++.+++|.+..+..+.+-..
T Consensus 157 ~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~l--------------- 220 (561)
T COG5354 157 HEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNL--------------- 220 (561)
T ss_pred Eec-CCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeee---------------
Confidence 997 43221 11111 135688889999643 3442 35678899999986665543221
Q ss_pred ccccccCCcccceeeeeecCCCCeEEecccccc------CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccc
Q psy15549 290 VPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE------NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCP 363 (621)
Q Consensus 290 ~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~------~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (621)
+... =..+.|.+.|++|++-..... .....+.++++. ...........+.+....|.|
T Consensus 221 ---fk~~-----~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~--------e~~i~V~~~~~~pVhdf~W~p 284 (561)
T COG5354 221 ---FKVS-----GVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRIT--------ERSIPVEKDLKDPVHDFTWEP 284 (561)
T ss_pred ---Eeec-----ccEEEEecCCceEEEEEEEeeecccceeccceEEEEeec--------ccccceeccccccceeeeecc
Confidence 1111 146899999998876542111 011222233322 111222225567788888877
Q ss_pred eeeecCCCCCCCCccCCCcEEEE--EEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCC---CcEEE
Q psy15549 364 VLFELKPSDDKPLFKLPYRIVIA--VATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTD---GYCSI 438 (621)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~d---g~i~i 438 (621)
.++.+++ |.....+.++|++.. ....+ ....=..+.|||.+++++.++-| |.|-+
T Consensus 285 ----------------~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~---Pe~~rNT~~fsp~~r~il~agF~nl~gni~i 344 (561)
T COG5354 285 ----------------LSSRFAVISGYMPASVSVFDLRGN-LRFYF---PEQKRNTIFFSPHERYILFAGFDNLQGNIEI 344 (561)
T ss_pred ----------------cCCceeEEecccccceeecccccc-eEEec---CCcccccccccCcccEEEEecCCccccceEE
Confidence 3333333 346789999999877 33333 33455678899999999998755 78999
Q ss_pred EEecCCcCCc-ccCCCCCcccccCCCCCCCCcccC------CCcccHHHhcccCccc
Q psy15549 439 ISFGDNEIGI-PYVPPSGEESKENDPTKGEPVRSE------DKPRSAEQAKGEGKVL 488 (621)
Q Consensus 439 w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~------~~~~~~~~w~~~~~~~ 488 (621)
|+........ .+.+. ......|+|+++.+... ..|..+.+|+..+...
T Consensus 345 ~~~~~rf~~~~~~~~~--n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~ 399 (561)
T COG5354 345 FDPAGRFKVAGAFNGL--NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKV 399 (561)
T ss_pred eccCCceEEEEEeecC--CceEeeccCCceEEEecCCCcccccCcceEEEEecCchh
Confidence 9988665443 44332 33445788898855443 3467788888776543
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.2e-11 Score=117.46 Aligned_cols=295 Identities=12% Similarity=0.175 Sum_probs=195.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEE
Q psy15549 130 KAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLIS 209 (621)
Q Consensus 130 ~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s 209 (621)
....|++|+.+..|||+|+.||.++|..+.+...-....+ ........+.+.+.+|...|..+.|+.+.+.|-+
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~g------laa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTt 88 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSG------LAAASNLSMNQTLEGHNASVMVVTWNENNQKLTT 88 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccc------cccccccchhhhhccCcceEEEEEeccccccccc
Confidence 4578999999999999999999999999887654322211 0111122234778999999999999999999999
Q ss_pred EeCCCeEEEEECCCCcEEEEe--ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccc
Q psy15549 210 GSVDNTAIMWDVHKGKNLGIL--TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFD 287 (621)
Q Consensus 210 ~~~dg~i~vwd~~~~~~~~~~--~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (621)
+..+|.|.+|-+-.|.-...+ ....+.|.+++|..+|..++..-.||.|.+=.+...+.-.
T Consensus 89 SDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwg----------------- 151 (1189)
T KOG2041|consen 89 SDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWG----------------- 151 (1189)
T ss_pred cCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecc-----------------
Confidence 999999999999877543332 2345678999999999999999999988777665433211
Q ss_pred ccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCce----ecCCcccceeeeeccc
Q psy15549 288 KVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAV----CLPSLQYYSVAVKCCP 363 (621)
Q Consensus 288 ~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 363 (621)
.+--......+.|++|.+.++.+- ..+...+++....|.......-.. .+......+..+.|..
T Consensus 152 -------KeLkg~~l~hv~ws~D~~~~Lf~~-----ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~ 219 (1189)
T KOG2041|consen 152 -------KELKGQLLAHVLWSEDLEQALFKK-----ANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNT 219 (1189)
T ss_pred -------hhcchheccceeecccHHHHHhhh-----cCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeecc
Confidence 000111235789999998887766 567777777655443321111100 0000011122222221
Q ss_pred eeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCC---------C
Q psy15549 364 VLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTD---------G 434 (621)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~d---------g 434 (621)
+...-..++-..++++..+|.+.|..-.+......+..+ -.|..+.|+++|..||.++.| +
T Consensus 220 --------g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dtg--m~~vgakWnh~G~vLAvcG~~~da~~~~d~n 289 (1189)
T KOG2041|consen 220 --------GPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDTG--MKIVGAKWNHNGAVLAVCGNDSDADEPTDSN 289 (1189)
T ss_pred --------CccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEecc--cEeecceecCCCcEEEEccCcccccCccccc
Confidence 111112234467888888999998776555444444333 578999999999999999854 2
Q ss_pred cEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcc
Q psy15549 435 YCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVR 470 (621)
Q Consensus 435 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (621)
.|.++. .-|.+...+..+...++.+.|...|-.++
T Consensus 290 ~v~Fys-p~G~i~gtlkvpg~~It~lsWEg~gLriA 324 (1189)
T KOG2041|consen 290 KVHFYS-PYGHIVGTLKVPGSCITGLSWEGTGLRIA 324 (1189)
T ss_pred eEEEec-cchhheEEEecCCceeeeeEEcCCceEEE
Confidence 344444 45778888888888888888876665444
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.6e-10 Score=110.37 Aligned_cols=247 Identities=14% Similarity=0.174 Sum_probs=165.3
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
........|++|+.... ++|.|+.||.++|..+.+......- .+-....++....++.||.+.|.-+.|
T Consensus 11 iPnnvkL~c~~WNke~g-----yIAcgG~dGlLKVlKl~t~t~d~~~------~glaa~snLsmNQtLeGH~~sV~vvTW 79 (1189)
T KOG2041|consen 11 IPNNVKLHCAEWNKESG-----YIACGGADGLLKVLKLGTDTTDLNK------SGLAAASNLSMNQTLEGHNASVMVVTW 79 (1189)
T ss_pred CCCCceEEEEEEcccCC-----eEEeccccceeEEEEccccCCcccc------cccccccccchhhhhccCcceEEEEEe
Confidence 34445688999999887 9999999999995544332211000 000011234455679999999999999
Q ss_pred ccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 90 SPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 90 spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
+.+.+-|.+.. +|-|.+|-+-.+.. .....-.....-|.+++|+.+|..|+....||.|.|=.++.++.-
T Consensus 80 Ne~~QKLTtSDt~GlIiVWmlykgsW-----~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIw---- 150 (1189)
T KOG2041|consen 80 NENNQKLTTSDTSGLIIVWMLYKGSW-----CEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIW---- 150 (1189)
T ss_pred ccccccccccCCCceEEEEeeecccH-----HHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceec----
Confidence 99999999888 77789999887743 111222335567899999999999999999999988776655421
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC-------cEEE----EeccCCcce
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG-------KNLG----ILTEHKKFV 237 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~-------~~~~----~~~~~~~~v 237 (621)
.+.+.+ .....+.|++|.+.++.+-..|.+.+||.... .+.. .+......|
T Consensus 151 ----------------gKeLkg--~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~ki 212 (1189)
T KOG2041|consen 151 ----------------GKELKG--QLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKI 212 (1189)
T ss_pred ----------------chhcch--heccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccc
Confidence 011222 12347899999999999999999999997532 1111 111122235
Q ss_pred EEEEEc--------CCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC
Q psy15549 238 QGVAWD--------PKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309 (621)
Q Consensus 238 ~~l~~s--------p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 309 (621)
..+.|. |+...|+++-..|.+.|..-........+ ...-.+..+.|++
T Consensus 213 a~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~------------------------dtgm~~vgakWnh 268 (1189)
T KOG2041|consen 213 AEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVV------------------------DTGMKIVGAKWNH 268 (1189)
T ss_pred cceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEE------------------------ecccEeecceecC
Confidence 556663 47788999988888877654332211111 1123567899999
Q ss_pred CCCeEEecc
Q psy15549 310 DGQLLIAPS 318 (621)
Q Consensus 310 dg~~l~~~s 318 (621)
+|..|++++
T Consensus 269 ~G~vLAvcG 277 (1189)
T KOG2041|consen 269 NGAVLAVCG 277 (1189)
T ss_pred CCcEEEEcc
Confidence 999999987
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.9e-09 Score=108.02 Aligned_cols=147 Identities=21% Similarity=0.345 Sum_probs=118.4
Q ss_pred eccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEE
Q psy15549 20 DIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG 99 (621)
Q Consensus 20 ~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~ 99 (621)
-++++.- ++++|+.-+.|. +|+........ .+.+|.+.|.++.|+-||+++++.
T Consensus 140 g~s~~~~-----~i~~gsv~~~ii--------------vW~~~~dn~p~-------~l~GHeG~iF~i~~s~dg~~i~s~ 193 (967)
T KOG0974|consen 140 GDSAEEL-----YIASGSVFGEII--------------VWKPHEDNKPI-------RLKGHEGSIFSIVTSLDGRYIASV 193 (967)
T ss_pred eccCcEE-----EEEeccccccEE--------------EEeccccCCcc-------eecccCCceEEEEEccCCcEEEEE
Confidence 3555554 899999988888 88877333322 489999999999999999999999
Q ss_pred c-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCccccccc
Q psy15549 100 D-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVN 178 (621)
Q Consensus 100 ~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 178 (621)
+ |..+++|.+.+... .....-+|+..|+.++|.|+ ++++++.|-+.++|+......
T Consensus 194 SdDRsiRlW~i~s~~~------~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~~~l--------------- 250 (967)
T KOG0974|consen 194 SDDRSIRLWPIDSREV------LGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNGTQL--------------- 250 (967)
T ss_pred ecCcceeeeecccccc------cCcccccccceeEEEEeccc--eeEEeccceEEEEEeccccee---------------
Confidence 9 88899999998742 22356689999999999998 899999999999996554432
Q ss_pred ccceeeeeeecCCC-CCeEEEEECCCCCEEEEEeCCCeEEEEECC
Q psy15549 179 KEHWIVTKILRGHL-EDVYDISWSPTSTHLISGSVDNTAIMWDVH 222 (621)
Q Consensus 179 ~~~~~~~~~~~~~~-~~v~~i~~spd~~~l~s~~~dg~i~vwd~~ 222 (621)
..+.+|. ..|+.++..++...++|++.|+.+++|++.
T Consensus 251 -------~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~ 288 (967)
T KOG0974|consen 251 -------EVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLN 288 (967)
T ss_pred -------hhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhh
Confidence 2344553 568899999988899999999999999874
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.2e-10 Score=111.39 Aligned_cols=189 Identities=14% Similarity=0.202 Sum_probs=141.6
Q ss_pred eEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE------cc-------------
Q psy15549 31 YRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF------SP------------- 91 (621)
Q Consensus 31 ~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~------sp------------- 91 (621)
.++|....||.++ ||+...++.... +.+...+ .+...+..| +|
T Consensus 6 ~~~A~~~~~g~l~--------------iw~t~~~~~~~e-~~p~~~~---s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s 67 (541)
T KOG4547|consen 6 DYFALSTGDGRLR--------------IWDTAKNQLQQE-FAPIASL---SGTCTYTKWGLSADYSPMKWLSLEKAKKAS 67 (541)
T ss_pred heEeecCCCCeEE--------------EEEccCceeeee-eccchhc---cCcceeEEEEEEeccchHHHHhHHHHhhcc
Confidence 3999999999999 888776654332 2222222 223333333 22
Q ss_pred -CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 92 -NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 92 -dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
|-..|+-|. .+.|.+|+...++- .....-..|.+.|.++.++.+-..|.+++.|+.+..|+......+
T Consensus 68 ~~t~~lvlgt~~g~v~~ys~~~g~i-----t~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~----- 137 (541)
T KOG4547|consen 68 LDTSMLVLGTPQGSVLLYSVAGGEI-----TAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVII----- 137 (541)
T ss_pred CCceEEEeecCCccEEEEEecCCeE-----EEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceee-----
Confidence 223455565 77789999888731 222223469999999999999999999999999999999888754
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC----
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK---- 245 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~---- 245 (621)
+........+.+++++|||..|++++ +.|.+||+++++.+..|.+|.++|+++.|--+
T Consensus 138 ----------------~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~ 199 (541)
T KOG4547|consen 138 ----------------RIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGI 199 (541)
T ss_pred ----------------eeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEecccc
Confidence 55667778899999999999999987 78999999999999999999999999999876
Q ss_pred -CCEEEEE-eCCCcEEEEEccC
Q psy15549 246 -NQYVATL-SSDRSLRTYSIQS 265 (621)
Q Consensus 246 -~~~l~s~-~~dg~i~iwd~~~ 265 (621)
|.++++. ..+..+.+|-++.
T Consensus 200 ~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 200 IGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred ccceeeeccccccceeEEEEEc
Confidence 6776643 4456677886654
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.2e-11 Score=114.24 Aligned_cols=220 Identities=15% Similarity=0.221 Sum_probs=159.7
Q ss_pred CCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEE----CCCCCEEEEEeCCC
Q psy15549 139 PNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISW----SPTSTHLISGSVDN 214 (621)
Q Consensus 139 p~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~----spd~~~l~s~~~dg 214 (621)
|...|+|....||.+++|+...++....|.+............|.+... .......++.+ +-|-..++-|...|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~--~s~~k~~~~~~~~~~s~~t~~lvlgt~~g 80 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSAD--YSPMKWLSLEKAKKASLDTSMLVLGTPQG 80 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEec--cchHHHHhHHHHhhccCCceEEEeecCCc
Confidence 4567999999999999999999987766644433333333333331111 11111111111 12345678888899
Q ss_pred eEEEEECCCCcEEEEec--cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccc
Q psy15549 215 TAIMWDVHKGKNLGILT--EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPL 292 (621)
Q Consensus 215 ~i~vwd~~~~~~~~~~~--~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (621)
.|.+|++..++....+. .|.+.|.++.++.+-..|.+++.|+.+..|+...+..+..+....
T Consensus 81 ~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~---------------- 144 (541)
T KOG4547|consen 81 SVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQK---------------- 144 (541)
T ss_pred cEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCC----------------
Confidence 99999999998887775 588999999999999999999999999999999988777665322
Q ss_pred cccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCC
Q psy15549 293 FHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSD 372 (621)
Q Consensus 293 ~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (621)
..+.+++.+|||..+++++
T Consensus 145 -------~~~~sl~is~D~~~l~~as------------------------------------------------------ 163 (541)
T KOG4547|consen 145 -------PLVSSLCISPDGKILLTAS------------------------------------------------------ 163 (541)
T ss_pred -------CccceEEEcCCCCEEEecc------------------------------------------------------
Confidence 2357899999999999877
Q ss_pred CCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCC-----CCeEEEE-eCCCcEEEEEecC---
Q psy15549 373 DKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSD-----GKVLIAS-STDGYCSIISFGD--- 443 (621)
Q Consensus 373 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spd-----g~~l~s~-s~dg~i~iw~~~~--- 443 (621)
+.|.+||+.+.+.+..+ .+|.++|.++.|.-+ |.+++++ ..+..+.+|-+..
T Consensus 164 ------------------~~ik~~~~~~kevv~~f-tgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~k 224 (541)
T KOG4547|consen 164 ------------------RQIKVLDIETKEVVITF-TGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKEDK 224 (541)
T ss_pred ------------------ceEEEEEccCceEEEEe-cCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEcccc
Confidence 67999999999999988 579999999999887 7766654 4566688887764
Q ss_pred -CcCCcccCCCCCc
Q psy15549 444 -NEIGIPYVPPSGE 456 (621)
Q Consensus 444 -~~~~~~~~~~~~~ 456 (621)
......+..++..
T Consensus 225 kks~~~sl~~~dip 238 (541)
T KOG4547|consen 225 KKSLSCSLTVPDIP 238 (541)
T ss_pred cchhheeeccCCCC
Confidence 2344444444433
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.3e-08 Score=111.45 Aligned_cols=320 Identities=17% Similarity=0.212 Sum_probs=193.8
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeE----EeccccccccceeeccccccccCcEEEEE
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIW----YLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw----~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
.+.|.++.|-++.. .|+.+..+|.|. +. +..... ++. ...-..+|.+++
T Consensus 75 ~~~ivs~~yl~d~~-----~l~~~~~~Gdi~--------------~~~~~~~~~~~~-----~E~---VG~vd~GI~a~~ 127 (928)
T PF04762_consen 75 NDKIVSFQYLADSE-----SLCIALASGDII--------------LVREDPDPDEDE-----IEI---VGSVDSGILAAS 127 (928)
T ss_pred CCcEEEEEeccCCC-----cEEEEECCceEE--------------EEEccCCCCCce-----eEE---EEEEcCcEEEEE
Confidence 45799999999998 889999999988 55 222221 111 233457899999
Q ss_pred EccCCCEEEEEc-CCceEEEEec----cC---------c-------cccccc-------e--------e------ccccc
Q psy15549 89 FSPNGELLASGD-DVGKEIWYLT----ER---------E-------SGIANV-------E--------F------ASDLS 126 (621)
Q Consensus 89 ~spdg~~las~~-d~~v~iw~~~----~~---------~-------~~~~~~-------~--------~------~~~~~ 126 (621)
||||+..|+... ++.+.+.... .. . ++.+.- + + ...+.
T Consensus 128 WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s 207 (928)
T PF04762_consen 128 WSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS 207 (928)
T ss_pred ECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc
Confidence 999999999876 6665443211 10 0 000000 0 0 01122
Q ss_pred ccCCCeEEEEECCCCCEEEEEeC---C---CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEE
Q psy15549 127 RHQKAVNVVRFSPNGELLASGDD---E---STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISW 200 (621)
Q Consensus 127 ~h~~~V~~i~~sp~g~~l~s~s~---d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 200 (621)
+...-..|+|-.||.|+|+.+. . ..+|||+-+ +... .....-.+--.+++|
T Consensus 208 -~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~---------------------stSE~v~gLe~~l~W 264 (928)
T PF04762_consen 208 -WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQ---------------------STSEPVDGLEGALSW 264 (928)
T ss_pred -cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEE---------------------eccccCCCccCCccC
Confidence 3345567999999999998764 2 478999855 3321 111122222357899
Q ss_pred CCCCCEEEEEeC---CCeEEEEECCCCcEEEEec----cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCce--eeee
Q psy15549 201 SPTSTHLISGSV---DNTAIMWDVHKGKNLGILT----EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKK--VISR 271 (621)
Q Consensus 201 spd~~~l~s~~~---dg~i~vwd~~~~~~~~~~~----~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~--~~~~ 271 (621)
.|.|+++|+... ...|.+|. ++|-....|. .....|..+.|++++..||....|. |.+|...+-. +.+.
T Consensus 265 rPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqe 342 (928)
T PF04762_consen 265 RPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQE 342 (928)
T ss_pred CCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEE
Confidence 999999998765 34566666 4565544443 3456799999999999999877665 9999887644 1222
Q ss_pred cccCCCCCCCccccccccccccccCCcccceeeeeecCCCC-eEEeccccccCCCCCCcceeeeeeeeecccCCCceecC
Q psy15549 272 ACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ-LLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLP 350 (621)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~-~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~ 350 (621)
+... ....+..+.|+|... .|.+.+ ..+.+..++........
T Consensus 343 i~~~----------------------~~~~~~~~~Wdpe~p~~L~v~t-----~~g~~~~~~~~~~v~~s---------- 385 (928)
T PF04762_consen 343 IRFS----------------------SSESVNFVKWDPEKPLRLHVLT-----SNGQYEIYDFAWDVSRS---------- 385 (928)
T ss_pred EEcc----------------------CCCCCCceEECCCCCCEEEEEe-----cCCcEEEEEEEEEEEec----------
Confidence 2100 011123489999653 455544 33444444433221111
Q ss_pred CcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc---eeEEEecccccceEEEEEcCCCCeE
Q psy15549 351 SLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS---PFAFIANIHYTKLTDITWSSDGKVL 427 (621)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~h~~~v~~~~~spdg~~l 427 (621)
+ ...+.+.-+++.-+...+.+-.++..- ++....-.-..+|.+++|++++..+
T Consensus 386 ------------~------------~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~ 441 (928)
T PF04762_consen 386 ------------P------------GSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRF 441 (928)
T ss_pred ------------C------------CCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeE
Confidence 0 001122334444455567777666543 2222211245789999999999889
Q ss_pred EEEeCCCcEEEEEecCCc
Q psy15549 428 IASSTDGYCSIISFGDNE 445 (621)
Q Consensus 428 ~s~s~dg~i~iw~~~~~~ 445 (621)
++-..||.|.+|......
T Consensus 442 avl~~d~~l~~~~~~~~~ 459 (928)
T PF04762_consen 442 AVLTSDGSLSIYEWDLKN 459 (928)
T ss_pred EEEECCCCEEEEEecCCC
Confidence 999999999999976543
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.1e-11 Score=131.65 Aligned_cols=201 Identities=17% Similarity=0.257 Sum_probs=157.9
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
...|+-..|.++.-+|... +.+||+.||.|+ +|.+..++.... .+ ..|. ..|+.+
T Consensus 2203 ~~k~~v~~v~r~~sHp~~~-----~Yltgs~dgsv~--------------~~~w~~~~~v~~----~r-t~g~-s~vtr~ 2257 (2439)
T KOG1064|consen 2203 MIKHPVENVRRMTSHPSDP-----YYLTGSQDGSVR--------------MFEWGHGQQVVC----FR-TAGN-SRVTRS 2257 (2439)
T ss_pred EeecccCceeeecCCCCCc-----eEEecCCCceEE--------------EEeccCCCeEEE----ee-ccCc-chhhhh
Confidence 3456667899999999998 999999999999 776665543221 11 2233 789999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe---CCCcEEEEEccCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD---DESTIIVWKQKTDQD 163 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s---~dg~i~vwd~~~~~~ 163 (621)
.|+.+|+-+..+. |+.+.+|.... ......+.|......+.|-. ..+++++ .++.+.+||..-...
T Consensus 2258 ~f~~qGnk~~i~d~dg~l~l~q~~p--------k~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~ 2327 (2439)
T KOG1064|consen 2258 RFNHQGNKFGIVDGDGDLSLWQASP--------KPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPM 2327 (2439)
T ss_pred hhcccCCceeeeccCCceeecccCC--------cceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcc
Confidence 9999998777766 99999999873 55666778999999999975 5677764 578999999654432
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEc
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD 243 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~s 243 (621)
.. .....|.+.++++++.|..+.|++|+.+|.|++||++..+.++.+.. ++
T Consensus 2328 ~s--------------------~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~---------~~ 2378 (2439)
T KOG1064|consen 2328 NS--------------------LVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA---------LD 2378 (2439)
T ss_pred cc--------------------eeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh---------hh
Confidence 21 22268999999999999999999999999999999998887776654 44
Q ss_pred CCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 244 PKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 244 p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
...+|++|+..|.++||++..-..+..+.
T Consensus 2379 -~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2379 -TREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred -hhheeeccCcccceEEEEccccchhhcCc
Confidence 56789999999999999998877766653
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.7e-11 Score=118.21 Aligned_cols=209 Identities=18% Similarity=0.284 Sum_probs=152.7
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccccc--CcEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ--KAVN 85 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~--~~V~ 85 (621)
+...-.+++.++.++|-|+ -+|.++.-|.. +-|+........ +..|. -.|-
T Consensus 19 lsl~v~~~~~a~si~p~gr-----di~lAsr~gl~---------------i~dld~p~~ppr-------~l~h~tpw~va 71 (1081)
T KOG0309|consen 19 LSLKVDGGFNAVSINPSGR-----DIVLASRQGLY---------------IIDLDDPFTPPR-------WLHHITPWQVA 71 (1081)
T ss_pred eEEEecCcccceeeccccc-----hhhhhhhcCeE---------------EEeccCCCCCce-------eeeccCcchhc
Confidence 4555678999999999998 89999988876 555554433222 22232 2466
Q ss_pred EEEEccCC---CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCC-CEEEEEeCCCcEEEEEccCC
Q psy15549 86 VVRFSPNG---ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 86 ~l~~spdg---~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg~i~vwd~~~~ 161 (621)
.+.|+|.. ..+++.+...-.+|++...... .....+.+|...|+.+.|+|.. ..+++++.|..+..||+++.
T Consensus 72 d~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~----aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp 147 (1081)
T KOG0309|consen 72 DVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSN----AIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSP 147 (1081)
T ss_pred ceecccCCCCceeEEecCcchhhhhhhhcCCcc----ceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCC
Confidence 77888743 4666677777889998876543 2334567899999999999954 58999999999999999887
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC-cEEEEeccCCcceEEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG-KNLGILTEHKKFVQGV 240 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~l 240 (621)
... ......-......++|+-....+++.+....|++||++.| .++..+++|...|..+
T Consensus 148 ~~p--------------------~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~ 207 (1081)
T KOG0309|consen 148 HRP--------------------FYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSI 207 (1081)
T ss_pred Ccc--------------------eeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehH
Confidence 642 1233334455678999875555566677788999999875 5677888888888888
Q ss_pred EEcCC-CCEEEEEeCCCcEEEEEccCce
Q psy15549 241 AWDPK-NQYVATLSSDRSLRTYSIQSKK 267 (621)
Q Consensus 241 ~~sp~-~~~l~s~~~dg~i~iwd~~~~~ 267 (621)
.|..- -..+.+.+.||+|+.||.....
T Consensus 208 ~fnr~~~s~~~s~~~d~tvkfw~y~kSt 235 (1081)
T KOG0309|consen 208 DFNRFKYSEIMSSSNDGTVKFWDYSKST 235 (1081)
T ss_pred HHhhhhhhhhcccCCCCceeeecccccc
Confidence 88652 2457789999999999986543
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.8e-09 Score=94.69 Aligned_cols=185 Identities=17% Similarity=0.163 Sum_probs=127.0
Q ss_pred cCcEEEEEEcc---CCC-EEEEEc-CCceEEEEeccCccccccceecccccccC---CCeEEEEECCCCCEEEEEeCCCc
Q psy15549 81 QKAVNVVRFSP---NGE-LLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQ---KAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 81 ~~~V~~l~~sp---dg~-~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~---~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
...++.+.|.. +|. .|+-+. .+.+.++........ ..+..+..-. ....++.|++.+..++++..+|.
T Consensus 69 ts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss----~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~ 144 (339)
T KOG0280|consen 69 TSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESS----VHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGS 144 (339)
T ss_pred ccccceeeeeeccCCccceeeeccccceEEEEeeccceee----eeecccchhhhhheeeeEEEeeccCceEEEEcCCCc
Confidence 45677788864 455 233333 788888887654321 1111121111 12457889999999999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECC-CCcEEEE-
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVH-KGKNLGI- 229 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~-~~~~~~~- 229 (621)
+.+-+....... ..+.++.|.-.++.+.|+. +.+++.+|+.|+.+..||++ .++.+..
T Consensus 145 ~~~v~~t~~~le-------------------~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n 205 (339)
T KOG0280|consen 145 ISGVYETEMVLE-------------------KVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHN 205 (339)
T ss_pred EEEEecceeeee-------------------ecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeec
Confidence 986554443321 1246788999999999987 44789999999999999998 3444444
Q ss_pred eccCCcceEEEEEcC-CCCEEEEEeCCCcEEEEEccC-ceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 230 LTEHKKFVQGVAWDP-KNQYVATLSSDRSLRTYSIQS-KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
.+-|...|.++.-+| .+.++++|+.|-.|++||.+. ++.+..- ...+.|..+.+
T Consensus 206 ~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~------------------------~v~GGVWRi~~ 261 (339)
T KOG0280|consen 206 SKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKA------------------------KVGGGVWRIKH 261 (339)
T ss_pred ceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccC------------------------ccccceEEEEe
Confidence 456888898988876 578999999999999999985 3433221 23466788888
Q ss_pred cCCCC
Q psy15549 308 SPDGQ 312 (621)
Q Consensus 308 spdg~ 312 (621)
+|.-.
T Consensus 262 ~p~~~ 266 (339)
T KOG0280|consen 262 HPEIF 266 (339)
T ss_pred cchhh
Confidence 88643
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.4e-11 Score=115.30 Aligned_cols=181 Identities=17% Similarity=0.230 Sum_probs=135.3
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
...+.||+..|..++--.+.+.+++++ |.+|++|.+...+.......+..++..|+.+|..+.|-.+.++++++ ||.
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~g 805 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGG 805 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCc
Confidence 345789999999887666666666666 99999999998776666556777889999999999999998888877 678
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCcEEEEec
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~~~~~~~~~~ 231 (621)
|++||.--++.+..... ....+..+.|.|+. +-+...++.| +...+|+++|.+.++-...++
T Consensus 806 iHlWDPFigr~Laq~~d----------------apk~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~k 868 (1034)
T KOG4190|consen 806 IHLWDPFIGRLLAQMED----------------APKEGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELK 868 (1034)
T ss_pred ceeecccccchhHhhhc----------------CcccCCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEE
Confidence 99999877766532200 01112233344443 2234444444 678999999999877655543
Q ss_pred -----cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 232 -----EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 232 -----~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
+..+.+++++..+.|++++.+-..|.|.+.|.++|+.+..+.
T Consensus 869 Vcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswr 915 (1034)
T KOG4190|consen 869 VCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWR 915 (1034)
T ss_pred eccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCC
Confidence 345668999999999999999999999999999999887664
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.6e-10 Score=100.30 Aligned_cols=255 Identities=15% Similarity=0.185 Sum_probs=179.9
Q ss_pred eecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEE
Q psy15549 120 EFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDIS 199 (621)
Q Consensus 120 ~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 199 (621)
.+.+.+.||.+.|+....-|-..-+++.+.|.+++||--....+. |. ........+++++.
T Consensus 15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~-----------------wp--sI~~~mP~~~~~~~ 75 (404)
T KOG1409|consen 15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQY-----------------WP--SIYHYMPSPCSAME 75 (404)
T ss_pred hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEecccccc-----------------Cc--hhhhhCCCCceEee
Confidence 556778899999999999887778999999999999964433221 10 22234567899999
Q ss_pred ECCCCCEEEEEeCCCeEEEEECC----CCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccC
Q psy15549 200 WSPTSTHLISGSVDNTAIMWDVH----KGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRS 275 (621)
Q Consensus 200 ~spd~~~l~s~~~dg~i~vwd~~----~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 275 (621)
+.++...|++|-..|++.-+.+. ....++....|...+..+-|+-...++++.+.|..+.---.+.+..+..+...
T Consensus 76 y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~ 155 (404)
T KOG1409|consen 76 YVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFE 155 (404)
T ss_pred eeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEee
Confidence 99999999999999999988664 33445555679999999999998999999999987755555555444332211
Q ss_pred CCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccc
Q psy15549 276 KLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYY 355 (621)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (621)
..+....... .......+.+.|+.+.+-+ ..-.+...+.+|...
T Consensus 156 ~~~t~~~~d~-----~~~fvGd~~gqvt~lr~~~-------------------------------~~~~~i~~~~~h~~~ 199 (404)
T KOG1409|consen 156 TPASALQFDA-----LYAFVGDHSGQITMLKLEQ-------------------------------NGCQLITTFNGHTGE 199 (404)
T ss_pred ccCCCCceee-----EEEEecccccceEEEEEee-------------------------------cCCceEEEEcCcccc
Confidence 1110000000 0001111122222222222 223444566778888
Q ss_pred eeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCc
Q psy15549 356 SVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGY 435 (621)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~ 435 (621)
+.++.|.+ ..+.++++..|..+.+||+-..+-+.....+|...|..+...+--+.|++++.||.
T Consensus 200 ~~~l~Wd~----------------~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~ 263 (404)
T KOG1409|consen 200 VTCLKWDP----------------GQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGG 263 (404)
T ss_pred eEEEEEcC----------------CCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCe
Confidence 88888877 55789999999999999998887666666789999999998888899999999999
Q ss_pred EEEEEecCCc
Q psy15549 436 CSIISFGDNE 445 (621)
Q Consensus 436 i~iw~~~~~~ 445 (621)
|.+|+++...
T Consensus 264 i~~w~mn~~r 273 (404)
T KOG1409|consen 264 IVVWNMNVKR 273 (404)
T ss_pred EEEEecccee
Confidence 9999998543
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=2e-09 Score=107.58 Aligned_cols=358 Identities=15% Similarity=0.160 Sum_probs=215.1
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
..-.++.|+|.| ++|.|+..- |. +-|....+ .+..+.-|...|+.+.|.|-.
T Consensus 16 sN~~A~Dw~~~G------LiAygshsl-V~--------------VVDs~s~q-------~iqsie~h~s~V~~VrWap~~ 67 (1062)
T KOG1912|consen 16 SNRNAADWSPSG------LIAYGSHSL-VS--------------VVDSRSLQ-------LIQSIELHQSAVTSVRWAPAP 67 (1062)
T ss_pred ccccccccCccc------eEEEecCce-EE--------------EEehhhhh-------hhhccccCccceeEEEeccCC
Confidence 346789999999 899998764 44 55544333 344578899999999998731
Q ss_pred ------------CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC---CC-CEEEEEeCCCcEEEE
Q psy15549 94 ------------ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP---NG-ELLASGDDESTIIVW 156 (621)
Q Consensus 94 ------------~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp---~g-~~l~s~s~dg~i~vw 156 (621)
-+||++. .|.|.+||.... ..+..+..|..+|..++|-+ +. .+|+.-....+|.+|
T Consensus 68 ~p~~llS~~~~~lliAsaD~~GrIil~d~~~~-------s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLw 140 (1062)
T KOG1912|consen 68 SPRDLLSPSSSQLLIASADISGRIILVDFVLA-------SVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLW 140 (1062)
T ss_pred CchhccCccccceeEEeccccCcEEEEEehhh-------hhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEE
Confidence 2566666 888999999887 55667788999999999976 33 366666667799999
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECC-------CCcEEE
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVH-------KGKNLG 228 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~-------~~~~~~ 228 (621)
+..+++..-.. ........|+.+.| |.+++..-+..|.+.+-+.- .++..+
T Consensus 141 ntdtG~k~Wk~---------------------~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~q 199 (1062)
T KOG1912|consen 141 NTDTGEKFWKY---------------------DYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQ 199 (1062)
T ss_pred EccCCceeecc---------------------ccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEE
Confidence 99999865222 22334466788888 66777776667777666542 123333
Q ss_pred EeccCCc-------------------------ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcc
Q psy15549 229 ILTEHKK-------------------------FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSH 283 (621)
Q Consensus 229 ~~~~~~~-------------------------~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 283 (621)
.-..|.. ....++|+|.-+.++.......+.++|++-..++.........
T Consensus 200 I~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~----- 274 (1062)
T KOG1912|consen 200 ITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGG----- 274 (1062)
T ss_pred EecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCC-----
Confidence 3222222 0124567887666666677888999999888777765433221
Q ss_pred ccccccccccccCCcccceeeeeecCCC--CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCC-cccceeee-
Q psy15549 284 ELFDKVVPLFHDDTMKSFFRRLTFSPDG--QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPS-LQYYSVAV- 359 (621)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~i~~~~~spdg--~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 359 (621)
+.-+.+-|++ ..|++.. .+|.+.+|-.+....... .+...+.. ....+.++
T Consensus 275 ------------------akfv~vlP~~~rd~LfclH-----~nG~ltirvrk~~~~~f~--~~~~~l~~dl~~Q~~~vr 329 (1062)
T KOG1912|consen 275 ------------------AKFVDVLPDPRRDALFCLH-----SNGRLTIRVRKEEPTEFK--KPNASLSMDLGEQVHVVR 329 (1062)
T ss_pred ------------------cceeEeccCCCcceEEEEe-----cCCeEEEEEeeccCcccc--ccchhhccccccceEEEe
Confidence 1235555654 4677776 788888887553221111 11111100 00001110
Q ss_pred ---eccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE------------------------------E
Q psy15549 360 ---KCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA------------------------------F 406 (621)
Q Consensus 360 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~------------------------------~ 406 (621)
.|.|.+...-+. ....++..-.+|.+.+|.+.+++.-. .
T Consensus 330 ~m~~~rp~~~~~cPs--------~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS 401 (1062)
T KOG1912|consen 330 PMEEFRPVIGASCPS--------TPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLS 401 (1062)
T ss_pred echhcccceeecCCC--------ChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchh
Confidence 111111110001 01222233344555555554332100 0
Q ss_pred EecccccceEEEEEcC-----------CC-------CeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCC
Q psy15549 407 IANIHYTKLTDITWSS-----------DG-------KVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTK 465 (621)
Q Consensus 407 ~~~~h~~~v~~~~~sp-----------dg-------~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (621)
..++|....++....| -| .++|.|...|+|.++|+.++.+.+.+..|...+..+.|-..
T Consensus 402 ~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~ 478 (1062)
T KOG1912|consen 402 DDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGN 478 (1062)
T ss_pred hcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhhhhhhcccccceeeeeeccc
Confidence 0123554454444332 22 25778899999999999999999999999888887766444
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.4e-08 Score=100.37 Aligned_cols=139 Identities=8% Similarity=0.032 Sum_probs=92.5
Q ss_pred CeEEEEECCCCCE-EEEEeC---CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCE
Q psy15549 131 AVNVVRFSPNGEL-LASGDD---ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTH 206 (621)
Q Consensus 131 ~V~~i~~sp~g~~-l~s~s~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~ 206 (621)
.+....|+|||+. ++..+. +..|.++|+.+++. ..+....+......|+|||+.
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~----------------------~~lt~~~g~~~~~~~SPDG~~ 246 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKK----------------------EKIASSQGMLVVSDVSKDGSK 246 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcE----------------------EEEecCCCcEEeeEECCCCCE
Confidence 6778999999984 664433 35688899987763 233334555667889999987
Q ss_pred EEEEe-C--CCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCC-C--cEEEEEccCceeeeecccCCCCCC
Q psy15549 207 LISGS-V--DNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSD-R--SLRTYSIQSKKVISRACRSKLPVD 280 (621)
Q Consensus 207 l~s~~-~--dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~ 280 (621)
|+... . +..|.++|+.++.. ..+..+........|+|||+.|+..+.. + .|.++|+.+++..+....
T Consensus 247 la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~------ 319 (419)
T PRK04043 247 LLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH------ 319 (419)
T ss_pred EEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC------
Confidence 76543 2 35788889877764 3444444334456899999988877643 3 577778877654332210
Q ss_pred CccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 281 SSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
.. ....|||||++|+...
T Consensus 320 ---------------g~-----~~~~~SPDG~~Ia~~~ 337 (419)
T PRK04043 320 ---------------GK-----NNSSVSTYKNYIVYSS 337 (419)
T ss_pred ---------------CC-----cCceECCCCCEEEEEE
Confidence 00 1248999999998766
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=8.1e-10 Score=100.07 Aligned_cols=243 Identities=12% Similarity=0.212 Sum_probs=152.0
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccc---------------cceeEEeccccccccceeeccc-
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLK---------------TGKIWYLTERESGIANVEFASD- 76 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~---------------~~~iw~~~~~~~~~~~~~~~~~- 76 (621)
...|..+.|.+++. ...+...+.|.+|++|.+..-.... +.++=-+..... .....+.+.
T Consensus 84 eEKinkIrw~~~~n---~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~-~vea~prRv~ 159 (433)
T KOG1354|consen 84 EEKINKIRWLDDGN---LAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDL-EVEASPRRVY 159 (433)
T ss_pred hhhhhhceecCCCC---ccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccc-eeeeeeeeec
Confidence 45788899988874 4567777789999966553221110 000000000000 000111111
Q ss_pred cccccCcEEEEEEccCCCEEEEEcCCceEEEEeccCcccc--ccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGI--ANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTI 153 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~--~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i 153 (621)
-.+|.-.|+++.++.|+..++++.|=.|.+|.+....... ..++ ...+..-+.-|++..|+| .-+.|+..+..|+|
T Consensus 160 aNaHtyhiNSIS~NsD~Et~lSADdLRINLWnlei~d~sFnIVDIK-P~nmEeLteVITsaEFhp~~cn~f~YSSSKGtI 238 (433)
T KOG1354|consen 160 ANAHTYHINSISVNSDKETFLSADDLRINLWNLEIIDQSFNIVDIK-PANMEELTEVITSAEFHPHHCNVFVYSSSKGTI 238 (433)
T ss_pred cccceeEeeeeeecCccceEeeccceeeeeccccccCCceeEEEcc-ccCHHHHHHHHhhhccCHhHccEEEEecCCCcE
Confidence 2478889999999999999999999999999987653211 1111 112233456788999999 44678888889999
Q ss_pred EEEEccCCCCCCCCCCCCcc-cccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEEC-CCCcEEEEec
Q psy15549 154 IVWKQKTDQDLPEFPSSNLD-EENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDV-HKGKNLGILT 231 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~-~~~~~~~~~~ 231 (621)
++-|++....--........ ..+.+ ...+..--..|..+.|+++|+++++-+. -+|++||+ ...+++.++.
T Consensus 239 rLcDmR~~aLCd~hsKlfEepedp~~------rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~ 311 (433)
T KOG1354|consen 239 RLCDMRQSALCDAHSKLFEEPEDPSS------RSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYP 311 (433)
T ss_pred EEeechhhhhhcchhhhhccccCCcc------hhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEe
Confidence 99999854321110000000 00000 0112233457889999999999998663 57999999 4556666655
Q ss_pred cCCc------------c---eEEEEEcCCCCEEEEEeCCCcEEEEEccCce
Q psy15549 232 EHKK------------F---VQGVAWDPKNQYVATLSSDRSLRTYSIQSKK 267 (621)
Q Consensus 232 ~~~~------------~---v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~ 267 (621)
-|.. . -..++|+-++.++++|+....+++|++..|.
T Consensus 312 vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 312 VHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred ehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence 4431 1 2357899899999999999999999966554
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.1e-07 Score=102.12 Aligned_cols=290 Identities=15% Similarity=0.160 Sum_probs=162.9
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeec----cCc-----cccccceeEEecccccccc----ce-
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLL----KIP-----HRLKTGKIWYLTERESGIA----NV- 71 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~----~~~-----~~~~~~~iw~~~~~~~~~~----~~- 71 (621)
.++...-..+|.|++||||++ .||....++.+.+-.- -.. ...+.-+--++.=|++..+ ..
T Consensus 113 ~E~VG~vd~GI~a~~WSPD~E-----lla~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK 187 (928)
T PF04762_consen 113 IEIVGSVDSGILAASWSPDEE-----LLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGK 187 (928)
T ss_pred eEEEEEEcCcEEEEEECCCcC-----EEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhh
Confidence 456666778999999999999 9999988888754321 100 0000000111100000000 00
Q ss_pred -------ee------ccccccccCcEEEEEEccCCCEEEEEc----C---CceEEEEeccCccccccceecccccccCCC
Q psy15549 72 -------EF------ASDLSRHQKAVNVVRFSPNGELLASGD----D---VGKEIWYLTERESGIANVEFASDLSRHQKA 131 (621)
Q Consensus 72 -------~~------~~~~~~h~~~V~~l~~spdg~~las~~----d---~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~ 131 (621)
.+ ...+. +.+.-..++|-.||.|+|+.+ . ..++||+-+. ........-.+-
T Consensus 188 ~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG--------~L~stSE~v~gL 258 (928)
T PF04762_consen 188 AAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSREG--------ELQSTSEPVDGL 258 (928)
T ss_pred hhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCCc--------eEEeccccCCCc
Confidence 00 01122 445667899999999999865 2 3468887663 222222222222
Q ss_pred eEEEEECCCCCEEEEEeC---CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE
Q psy15549 132 VNVVRFSPNGELLASGDD---ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 132 V~~i~~sp~g~~l~s~s~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~ 208 (621)
-.+++|.|.|++||+.-. ...|.+|.-+ |-....| ...+......|..+.|++|+..||
T Consensus 259 e~~l~WrPsG~lIA~~q~~~~~~~VvFfErN-GLrhgeF-----------------~l~~~~~~~~v~~l~Wn~ds~iLA 320 (928)
T PF04762_consen 259 EGALSWRPSGNLIASSQRLPDRHDVVFFERN-GLRHGEF-----------------TLRFDPEEEKVIELAWNSDSEILA 320 (928)
T ss_pred cCCccCCCCCCEEEEEEEcCCCcEEEEEecC-CcEeeeE-----------------ecCCCCCCceeeEEEECCCCCEEE
Confidence 346899999999998764 3456666533 3222111 111224566789999999999999
Q ss_pred EEeCCCeEEEEECCCCcE--EEEec-cCCcceEEEEEcCCC-CEEEEEeCCCcEEEEEccCce------------eeeec
Q psy15549 209 SGSVDNTAIMWDVHKGKN--LGILT-EHKKFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSKK------------VISRA 272 (621)
Q Consensus 209 s~~~dg~i~vwd~~~~~~--~~~~~-~~~~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~------------~~~~~ 272 (621)
....|. |.+|-..+..- .+.+. .....+..+.|+|.. ..|...+.+|.+..+++.-.. .+..+
T Consensus 321 v~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVI 399 (928)
T PF04762_consen 321 VWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVI 399 (928)
T ss_pred EEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEE
Confidence 987665 99998776532 22222 123335559999954 557777777777766553211 11122
Q ss_pred ccCCCCCCCcccc-ccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeee
Q psy15549 273 CRSKLPVDSSHEL-FDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 273 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
.+....++.-... .+-.. ....-.....|..++|++++..+++.. .|+.+.+|...
T Consensus 400 DG~~lllTpf~~a~VPPPM-s~~~l~~~~~v~~vaf~~~~~~~avl~-----~d~~l~~~~~~ 456 (928)
T PF04762_consen 400 DGNKLLLTPFRRAVVPPPM-SSYELELPSPVNDVAFSPSNSRFAVLT-----SDGSLSIYEWD 456 (928)
T ss_pred eCCeEEEecccccCCCchH-hceEEcCCCCcEEEEEeCCCCeEEEEE-----CCCCEEEEEec
Confidence 1111111000000 00000 011223456789999999998777777 78888888743
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.5e-08 Score=108.14 Aligned_cols=169 Identities=9% Similarity=0.129 Sum_probs=96.5
Q ss_pred EEEEEccC-CCEEEEEc-CCceEEEEeccCccccccceeccccc--------------ccCCCeEEEEECCCCCEEEEEe
Q psy15549 85 NVVRFSPN-GELLASGD-DVGKEIWYLTERESGIANVEFASDLS--------------RHQKAVNVVRFSPNGELLASGD 148 (621)
Q Consensus 85 ~~l~~spd-g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~--------------~h~~~V~~i~~sp~g~~l~s~s 148 (621)
..++++++ +.++++-. .+.|++|+..... ...+. .+-.....+++.++++.|+++.
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~--------i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaD 642 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNF--------IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVAD 642 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCCE--------EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEe
Confidence 45788875 44555544 6678888875431 11111 1112357899999888666654
Q ss_pred -CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcE
Q psy15549 149 -DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKN 226 (621)
Q Consensus 149 -~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~ 226 (621)
..+.|+++|+.++.. ..+.............. ... ...-...+.++|+| ++.++++.+.++.|++||..++..
T Consensus 643 t~n~~Ir~id~~~~~V-~tlag~G~~g~~~~gg~---~~~-~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v 717 (1057)
T PLN02919 643 TENHALREIDFVNETV-RTLAGNGTKGSDYQGGK---KGT-SQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVT 717 (1057)
T ss_pred CCCceEEEEecCCCEE-EEEeccCcccCCCCCCh---hhh-HhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeE
Confidence 456799999876532 11111000000000000 000 00012346899999 556667777789999999977654
Q ss_pred EEEecc---------------CCcceEEEEEcCCCCEEEEE-eCCCcEEEEEccCce
Q psy15549 227 LGILTE---------------HKKFVQGVAWDPKNQYVATL-SSDRSLRTYSIQSKK 267 (621)
Q Consensus 227 ~~~~~~---------------~~~~v~~l~~sp~~~~l~s~-~~dg~i~iwd~~~~~ 267 (621)
. .+.+ .......++++|++++|+++ +.++.|++||+.++.
T Consensus 718 ~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~ 773 (1057)
T PLN02919 718 R-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGG 773 (1057)
T ss_pred E-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCc
Confidence 2 2211 11234679999999865544 556899999998765
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.5e-08 Score=92.22 Aligned_cols=198 Identities=14% Similarity=0.074 Sum_probs=122.6
Q ss_pred EccCCCEEEEEc-----------CCceEEEEeccCccccccceeccccccc-------CCCeEEEEECCCCCEEEEEe-C
Q psy15549 89 FSPNGELLASGD-----------DVGKEIWYLTERESGIANVEFASDLSRH-------QKAVNVVRFSPNGELLASGD-D 149 (621)
Q Consensus 89 ~spdg~~las~~-----------d~~v~iw~~~~~~~~~~~~~~~~~~~~h-------~~~V~~i~~sp~g~~l~s~s-~ 149 (621)
+||||+.|+.+. ++.|.+||..+. +....+.-. ......++++|||++|+... .
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~-------~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~ 125 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTH-------LPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFS 125 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccC-------cEEeEEccCCCchhhccCccceEEECCCCCEEEEecCC
Confidence 999999887654 467999999987 333333221 12334789999999998776 3
Q ss_pred -CCcEEEEEccCCCCCCCCCCCCccccc-----------cccccee---------eee---eecCCCCCe-EEEEECC-C
Q psy15549 150 -ESTIIVWKQKTDQDLPEFPSSNLDEEN-----------VNKEHWI---------VTK---ILRGHLEDV-YDISWSP-T 203 (621)
Q Consensus 150 -dg~i~vwd~~~~~~~~~~~~~~~~~~~-----------~~~~~~~---------~~~---~~~~~~~~v-~~i~~sp-d 203 (621)
+..|.+.|+.+++.+..++.+.....- .+..... ... .+......+ ..-.|.+ +
T Consensus 126 p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~d 205 (352)
T TIGR02658 126 PSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKS 205 (352)
T ss_pred CCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCC
Confidence 689999999999887766443211100 0000000 000 010100000 0003345 7
Q ss_pred CCEEEEEeCCCeEEEEECCCC-----cEEEEecc-------CCcceEEEEEcCCCCEEEEEeC----------CCcEEEE
Q psy15549 204 STHLISGSVDNTAIMWDVHKG-----KNLGILTE-------HKKFVQGVAWDPKNQYVATLSS----------DRSLRTY 261 (621)
Q Consensus 204 ~~~l~s~~~dg~i~vwd~~~~-----~~~~~~~~-------~~~~v~~l~~sp~~~~l~s~~~----------dg~i~iw 261 (621)
|+++.+... |.|.+.|+... .....+.. ..+.+.-++++|++++++++.. .+.|.++
T Consensus 206 g~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~Vi 284 (352)
T TIGR02658 206 GRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVV 284 (352)
T ss_pred CcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEE
Confidence 888877776 99999996432 22332211 2233455999999999887532 2479999
Q ss_pred EccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC-eEEecc
Q psy15549 262 SIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ-LLIAPS 318 (621)
Q Consensus 262 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~-~l~~~s 318 (621)
|..+++.+..+... ..+..++++||++ +|++.+
T Consensus 285 D~~t~kvi~~i~vG------------------------~~~~~iavS~Dgkp~lyvtn 318 (352)
T TIGR02658 285 DAKTGKRLRKIELG------------------------HEIDSINVSQDAKPLLYALS 318 (352)
T ss_pred ECCCCeEEEEEeCC------------------------CceeeEEECCCCCeEEEEeC
Confidence 99999998877532 2457899999999 666554
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.8e-09 Score=91.91 Aligned_cols=157 Identities=20% Similarity=0.218 Sum_probs=114.4
Q ss_pred EEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccCC
Q psy15549 84 VNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 84 V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
..++.|++.+.-++++. ++.+.+-+.... .++..+.++.|...++...|+. +.+++++|+.|+.+..||++..
T Consensus 124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~-----~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p 198 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSRGSISGVYETEM-----VLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIP 198 (339)
T ss_pred eeEEEeeccCceEEEEcCCCcEEEEeccee-----eeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCC
Confidence 45778899888888776 666765554443 3355668899999999999986 4568999999999999999833
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCC-CcEEEEeccCCcceEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHK-GKNLGILTEHKKFVQG 239 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~ 239 (621)
+.. ......-|...|.+|.-+| .+.++++|+.|-.|++||.++ ++++..- ...+.|..
T Consensus 199 ~~~-------------------i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~-~v~GGVWR 258 (339)
T KOG0280|consen 199 KTF-------------------IWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKA-KVGGGVWR 258 (339)
T ss_pred cce-------------------eeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccC-ccccceEE
Confidence 310 1133456889999999887 678999999999999999985 5555443 34588999
Q ss_pred EEEcCCC--CEEEEEeCCCcEEEEEccCc
Q psy15549 240 VAWDPKN--QYVATLSSDRSLRTYSIQSK 266 (621)
Q Consensus 240 l~~sp~~--~~l~s~~~dg~i~iwd~~~~ 266 (621)
+.++|.- ..|+++-..| .+|.+...+
T Consensus 259 i~~~p~~~~~lL~~CMh~G-~ki~~~~~~ 286 (339)
T KOG0280|consen 259 IKHHPEIFHRLLAACMHNG-AKILDSSDK 286 (339)
T ss_pred EEecchhhhHHHHHHHhcC-ceEEEeccc
Confidence 9999953 3344444444 567776554
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.1e-07 Score=85.02 Aligned_cols=244 Identities=14% Similarity=0.159 Sum_probs=140.3
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC
Q psy15549 134 VVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD 213 (621)
Q Consensus 134 ~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d 213 (621)
.++.+.+|++||.-- |..|.|=..+..-.. + ..-..........-+-++||||+.+||.+...
T Consensus 2 ~~~~~~~Gk~lAi~q-d~~iEiRsa~Ddf~s--i--------------~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~ 64 (282)
T PF15492_consen 2 HLALSSDGKLLAILQ-DQCIEIRSAKDDFSS--I--------------IGKCQVPKDPNPQWRKLAWSPDCTLLAYAEST 64 (282)
T ss_pred ceeecCCCcEEEEEe-ccEEEEEeccCCchh--e--------------eEEEecCCCCCchheEEEECCCCcEEEEEcCC
Confidence 356778888777654 555655443332110 0 00012223344456789999999999999999
Q ss_pred CeEEEEECCCCcEEEEecc-------CCcceEEEEEcCCC------CEEEEEeCCCcEEEEEccCceeeeecccCCCCCC
Q psy15549 214 NTAIMWDVHKGKNLGILTE-------HKKFVQGVAWDPKN------QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVD 280 (621)
Q Consensus 214 g~i~vwd~~~~~~~~~~~~-------~~~~v~~l~~sp~~------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 280 (621)
|+|++||+.. ..+..+.. ....|..+.|-+.. ..|++...+|.++-|-+..+....-...+
T Consensus 65 G~i~vfdl~g-~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~h----- 138 (282)
T PF15492_consen 65 GTIRVFDLMG-SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENH----- 138 (282)
T ss_pred CeEEEEeccc-ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeE-----
Confidence 9999999964 44444432 23456777775421 24667778888888876433211100000
Q ss_pred CccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCC-------CCcceeeeeeeeecccCCCceecCCcc
Q psy15549 281 SSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDS-------TRKPISVTHVFTRACLNKPAVCLPSLQ 353 (621)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~-------~i~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (621)
...........|.++.++|..+.|++++.... .++ -+..|.+..
T Consensus 139 ----------sfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~-~~~~s~a~~~GLtaWRiL~------------------ 189 (282)
T PF15492_consen 139 ----------SFSFSSHYPHGINSAVYHPKHRLLLVGGCEQN-QDGMSKASSCGLTAWRILS------------------ 189 (282)
T ss_pred ----------EEEecccCCCceeEEEEcCCCCEEEEeccCCC-CCccccccccCceEEEEcC------------------
Confidence 00111223557899999999998887763211 111 112222211
Q ss_pred cceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC------cEEEEeCCCCceeEEEecccccceEEEEEcCCCCeE
Q psy15549 354 YYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN------NILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVL 427 (621)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l 427 (621)
-. ++-..+...+++ +..+|.+-+.+..... ......|..|..||||+.|
T Consensus 190 -------~~-----------------Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~-~~~~d~i~kmSlSPdg~~L 244 (282)
T PF15492_consen 190 -------DS-----------------PYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQ-GQEQDGIFKMSLSPDGSLL 244 (282)
T ss_pred -------CC-----------------CcEEEccccCccccccccccceeeccceeeeecc-ccCCCceEEEEECCCCCEE
Confidence 00 111122222222 1123333322221111 2245689999999999999
Q ss_pred EEEeCCCcEEEEEecCCcCCcccCCCC
Q psy15549 428 IASSTDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 428 ~s~s~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
|+...+|.|.+|++.+-.+.+.+....
T Consensus 245 a~ih~sG~lsLW~iPsL~~~~~W~~~e 271 (282)
T PF15492_consen 245 ACIHFSGSLSLWEIPSLRLQRSWKQDE 271 (282)
T ss_pred EEEEcCCeEEEEecCcchhhcccchhh
Confidence 999999999999999888777776544
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.9e-08 Score=99.12 Aligned_cols=271 Identities=15% Similarity=0.129 Sum_probs=154.0
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEec
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLT 110 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~ 110 (621)
.+++++.+|.|..||..+.+. +|....... +. . ... .++..++.++ ++.+..+|..
T Consensus 67 ~v~v~~~~g~v~a~d~~tG~~-----~W~~~~~~~----------~~---~---~p~--v~~~~v~v~~~~g~l~ald~~ 123 (377)
T TIGR03300 67 KVYAADADGTVVALDAETGKR-----LWRVDLDER----------LS---G---GVG--ADGGLVFVGTEKGEVIALDAE 123 (377)
T ss_pred EEEEECCCCeEEEEEccCCcE-----eeeecCCCC----------cc---c---ceE--EcCCEEEEEcCCCEEEEEECC
Confidence 788888899998666554433 565443221 10 1 111 1344555554 7778888877
Q ss_pred cCccccccceecccccccCCCeEE-EEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeec
Q psy15549 111 ERESGIANVEFASDLSRHQKAVNV-VRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR 189 (621)
Q Consensus 111 ~~~~~~~~~~~~~~~~~h~~~V~~-i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (621)
++. ........ ..+.+ ... .+..++.++.+|.|..||..+++.+-.+..... ...+.
T Consensus 124 tG~-------~~W~~~~~-~~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~------------~~~~~ 181 (377)
T TIGR03300 124 DGK-------ELWRAKLS-SEVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTP------------ALTLR 181 (377)
T ss_pred CCc-------EeeeeccC-ceeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCC------------ceeec
Confidence 663 22221111 11111 111 345677778899999999998876432210000 00000
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCc----c------e-EEEEEcCCCCEEEEEeCCCcE
Q psy15549 190 GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKK----F------V-QGVAWDPKNQYVATLSSDRSL 258 (621)
Q Consensus 190 ~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~----~------v-~~l~~sp~~~~l~s~~~dg~i 258 (621)
... +.... + ..++.+..+|.+..+|+.+|+.+........ . + ....+ .+..+++++.+|.+
T Consensus 182 ~~~----sp~~~-~-~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~~~g~l 253 (377)
T TIGR03300 182 GSA----SPVIA-D-GGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVV--DGGQVYAVSYQGRV 253 (377)
T ss_pred CCC----CCEEE-C-CEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEE--ECCEEEEEEcCCEE
Confidence 001 11111 2 4677888889999999999987655421100 0 0 11112 25677788889999
Q ss_pred EEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeee
Q psy15549 259 RTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFT 338 (621)
Q Consensus 259 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~ 338 (621)
..||..+++.+..... ... ...+
T Consensus 254 ~a~d~~tG~~~W~~~~---------------------------------~~~-~~p~----------------------- 276 (377)
T TIGR03300 254 AALDLRSGRVLWKRDA---------------------------------SSY-QGPA----------------------- 276 (377)
T ss_pred EEEECCCCcEEEeecc---------------------------------CCc-cCce-----------------------
Confidence 9999988865433210 000 0000
Q ss_pred ecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEE
Q psy15549 339 RACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDI 418 (621)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~ 418 (621)
..++.+++++.+|.++.+|..+++.+............+.
T Consensus 277 ----------------------------------------~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp 316 (377)
T TIGR03300 277 ----------------------------------------VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAP 316 (377)
T ss_pred ----------------------------------------EeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccC
Confidence 0235566677889999999998876654421111122222
Q ss_pred EEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCC
Q psy15549 419 TWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 419 ~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
.. .+..|++++.+|.|++||..+|++...+..+.
T Consensus 317 ~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~ 350 (377)
T TIGR03300 317 AV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDG 350 (377)
T ss_pred EE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC
Confidence 22 46689999999999999999999887776554
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.8e-09 Score=100.22 Aligned_cols=164 Identities=18% Similarity=0.244 Sum_probs=113.1
Q ss_pred cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEE---eCCCcEEEEEc
Q psy15549 83 AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG---DDESTIIVWKQ 158 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~---s~dg~i~vwd~ 158 (621)
.+..+..++.+++||.+. +....++++...... .++..... -...-+++.|..+......+ +....+.+|..
T Consensus 64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~---~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~ 139 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKG---AKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSA 139 (390)
T ss_pred cccccccCCCceEEEEEeCCCceEEEEEecCCCc---ceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeecc
Confidence 445566788899999887 555557776654321 12221111 12223344444444444443 44455666665
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCcce
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL-TEHKKFV 237 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~v 237 (621)
..+.. ...-+|-+.++.++|+||+++++++..|..|++-....-..+..+ -+|...|
T Consensus 140 ~~~~~----------------------~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFV 197 (390)
T KOG3914|consen 140 DSGRC----------------------EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFV 197 (390)
T ss_pred cccCc----------------------chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhhe
Confidence 55443 334599999999999999999999999999999887665555555 4699999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
..++.-++ ..|++++.|++|++||+.+|+.+..+.
T Consensus 198 S~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 198 STISLTDN-YLLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred eeeeeccC-ceeeecCCCCcEEEEecccCCcccccc
Confidence 99998764 558999999999999999999886654
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=2e-09 Score=96.11 Aligned_cols=258 Identities=15% Similarity=0.262 Sum_probs=162.1
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccccc----------
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ---------- 81 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~---------- 81 (621)
..+.|+++.|...|. +|++|...|.|. ++.-.... .-++++...+++|.
T Consensus 25 ead~ItaVefd~tg~-----YlatGDkgGRVv--------------lfer~~s~--~ceykf~teFQshe~EFDYLkSle 83 (460)
T COG5170 25 EADKITAVEFDETGL-----YLATGDKGGRVV--------------LFEREKSY--GCEYKFFTEFQSHELEFDYLKSLE 83 (460)
T ss_pred ccceeeEEEeccccc-----eEeecCCCceEE--------------Eeeccccc--ccchhhhhhhcccccchhhhhhcc
Confidence 456899999999997 999999999998 54433221 11233444555554
Q ss_pred --CcEEEEEEccCC---CEEEEEcCCceEEEEeccCc------------------cccccc-----------------ee
Q psy15549 82 --KAVNVVRFSPNG---ELLASGDDVGKEIWYLTERE------------------SGIANV-----------------EF 121 (621)
Q Consensus 82 --~~V~~l~~spdg---~~las~~d~~v~iw~~~~~~------------------~~~~~~-----------------~~ 121 (621)
..|..+.|..++ .+|+++.|.++++|.+.... +..... .+
T Consensus 84 ieEKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p 163 (460)
T COG5170 84 IEEKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKP 163 (460)
T ss_pred HHHHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEecc
Confidence 357888887654 57888889999999987651 000000 00
Q ss_pred cc-cccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCC-----CCe
Q psy15549 122 AS-DLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHL-----EDV 195 (621)
Q Consensus 122 ~~-~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v 195 (621)
.+ ....|.--|.++.|+.|...++++. |-.|.+|++.-......+ .-...|. .-|
T Consensus 164 ~rvyaNaH~yhiNSiS~NsD~et~lSaD-dLrINLWnl~i~D~sFnI------------------VDiKP~nmeeLteVI 224 (460)
T COG5170 164 CRVYANAHPYHINSISFNSDKETLLSAD-DLRINLWNLEIIDGSFNI------------------VDIKPHNMEELTEVI 224 (460)
T ss_pred ceeccccceeEeeeeeecCchheeeecc-ceeeeeccccccCCceEE------------------EeccCccHHHHHHHH
Confidence 00 1145777788999998888877764 668999988755432211 2222332 357
Q ss_pred EEEEECCC-CCEEEEEeCCCeEEEEECCCCcEE----E------------EeccCCcceEEEEEcCCCCEEEEEeCCCcE
Q psy15549 196 YDISWSPT-STHLISGSVDNTAIMWDVHKGKNL----G------------ILTEHKKFVQGVAWDPKNQYVATLSSDRSL 258 (621)
Q Consensus 196 ~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~~----~------------~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i 258 (621)
++..|+|. .+++...+..|.|++-|++..... . -+.+-...|..+.|+++|+++++-+ --+|
T Consensus 225 tSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltv 303 (460)
T COG5170 225 TSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTV 303 (460)
T ss_pred hhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceE
Confidence 88899994 456777788999999999843211 1 1112234678899999999998553 3589
Q ss_pred EEEEccCce-eeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 259 RTYSIQSKK-VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 259 ~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
+|||++..+ ++.++..+.. ..++...+|..+..-.. -.+.||.|.+.+++|+
T Consensus 304 kiwDvnm~k~pikTi~~h~~-------l~~~l~d~YEnDaifdk-FeisfSgd~~~v~sgs 356 (460)
T COG5170 304 KIWDVNMAKNPIKTIPMHCD-------LMDELNDVYENDAIFDK-FEISFSGDDKHVLSGS 356 (460)
T ss_pred EEEecccccCCceeechHHH-------HHHHHHhhhhccceeee-EEEEecCCcccccccc
Confidence 999997643 4444422110 11111122222221111 3578899999998888
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.6e-08 Score=91.25 Aligned_cols=226 Identities=12% Similarity=0.132 Sum_probs=156.6
Q ss_pred ccCCCEEEEEcCCceEEEEeccCcccccccee-cc---cccccCCCeEEEE-ECC-CCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 90 SPNGELLASGDDVGKEIWYLTERESGIANVEF-AS---DLSRHQKAVNVVR-FSP-NGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 90 spdg~~las~~d~~v~iw~~~~~~~~~~~~~~-~~---~~~~h~~~V~~i~-~sp-~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
+.||+.++....+.|.+||..+..-......+ +. .....-.+..-+. |++ +|.+++..|. |...|.+.-.+-.
T Consensus 275 nsDGkrIvFq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~~~ 353 (668)
T COG4946 275 NSDGKRIVFQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDGYS 353 (668)
T ss_pred CCCCcEEEEecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCCee
Confidence 45788888887888899988765322111110 00 0000001111122 444 7889988885 6777777655542
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC-eEEEEECCCCcEEEEeccCCcceEEEEE
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN-TAIMWDVHKGKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg-~i~vwd~~~~~~~~~~~~~~~~v~~l~~ 242 (621)
..-+|...|....+..+++-++.|..|| .+-|||.++++. ..+...-+.|.++..
T Consensus 354 -----------------------iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~v 409 (668)
T COG4946 354 -----------------------IQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKV 409 (668)
T ss_pred -----------------------EEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEE
Confidence 2347888899999999999999999999 899999987764 556667788999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
+|+|++++.+.....|.+.|+.++.....- ..-.+-|+.++|+|+++++|.+-
T Consensus 410 s~dGK~~vvaNdr~el~vididngnv~~id-----------------------kS~~~lItdf~~~~nsr~iAYaf---- 462 (668)
T COG4946 410 SPDGKKVVVANDRFELWVIDIDNGNVRLID-----------------------KSEYGLITDFDWHPNSRWIAYAF---- 462 (668)
T ss_pred cCCCcEEEEEcCceEEEEEEecCCCeeEec-----------------------ccccceeEEEEEcCCceeEEEec----
Confidence 999999999988889999999988753321 12234578999999999999765
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
- .+--...|++||+.+++
T Consensus 463 -P-------------------------------------------------------------~gy~tq~Iklydm~~~K 480 (668)
T COG4946 463 -P-------------------------------------------------------------EGYYTQSIKLYDMDGGK 480 (668)
T ss_pred -C-------------------------------------------------------------cceeeeeEEEEecCCCe
Confidence 0 11123578999999988
Q ss_pred eeEEEecccccceEEEEEcCCCCeEEEEe
Q psy15549 403 PFAFIANIHYTKLTDITWSSDGKVLIASS 431 (621)
Q Consensus 403 ~~~~~~~~h~~~v~~~~~spdg~~l~s~s 431 (621)
...... ..+.=.+-+|.|||++|.--+
T Consensus 481 iy~vTT--~ta~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 481 IYDVTT--PTAYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred EEEecC--CcccccCcccCCCCcEEEEEe
Confidence 666542 233345678999999877554
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.5e-08 Score=96.13 Aligned_cols=193 Identities=10% Similarity=0.010 Sum_probs=118.3
Q ss_pred CeEEEeccccccCCcceE-EEEecCC-ceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 15 PVLSVDIQLKQEKDNCYR-IVTGGAD-SHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~-l~tg~~d-g~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
.+....|+|||+ . ++..+.+ +.-.+| ++|+.+++... +....+.+....|+||
T Consensus 189 ~~~~p~wSpDG~-----~~i~y~s~~~~~~~Iy------------v~dl~tg~~~~--------lt~~~g~~~~~~~SPD 243 (419)
T PRK04043 189 LNIFPKWANKEQ-----TAFYYTSYGERKPTLY------------KYNLYTGKKEK--------IASSQGMLVVSDVSKD 243 (419)
T ss_pred CeEeEEECCCCC-----cEEEEEEccCCCCEEE------------EEECCCCcEEE--------EecCCCcEEeeEECCC
Confidence 788899999997 4 5544443 233434 77876664322 2234455667889999
Q ss_pred CCEEEEEc--CC--ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CC--cEEEEEccCCCCCC
Q psy15549 93 GELLASGD--DV--GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-ES--TIIVWKQKTDQDLP 165 (621)
Q Consensus 93 g~~las~~--d~--~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg--~i~vwd~~~~~~~~ 165 (621)
|+.|+... ++ .+.++++..+. ...+..+........|+|||+.|+..+. .+ .|.++|+.+++..
T Consensus 244 G~~la~~~~~~g~~~Iy~~dl~~g~--------~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~- 314 (419)
T PRK04043 244 GSKLLLTMAPKGQPDIYLYDTNTKT--------LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVE- 314 (419)
T ss_pred CCEEEEEEccCCCcEEEEEECCCCc--------EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeE-
Confidence 98877643 33 35555554431 2223333333345689999997777653 23 5777788766531
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC---------CeEEEEECCCCcEEEEeccCCcc
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD---------NTAIMWDVHKGKNLGILTEHKKF 236 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d---------g~i~vwd~~~~~~~~~~~~~~~~ 236 (621)
+... ... ....|+|||++|+..... ..|.+.|+.++.. ..+... ..
T Consensus 315 --------------------rlt~-~g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~ 369 (419)
T PRK04043 315 --------------------QVVF-HGK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GV 369 (419)
T ss_pred --------------------eCcc-CCC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CC
Confidence 1111 111 124899999988876653 3688889888765 344333 23
Q ss_pred eEEEEEcCCCCEEEEEeCCC---cEEEEEccCc
Q psy15549 237 VQGVAWDPKNQYVATLSSDR---SLRTYSIQSK 266 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg---~i~iwd~~~~ 266 (621)
.....|+|||+.|+..+.++ .+.+.++...
T Consensus 370 ~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~ 402 (419)
T PRK04043 370 NQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYN 402 (419)
T ss_pred cCCeEECCCCCEEEEEEccCCcEEEEEEecCCC
Confidence 34688999999887766432 3666676543
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.9e-09 Score=117.05 Aligned_cols=164 Identities=14% Similarity=0.225 Sum_probs=126.4
Q ss_pred cccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIV 155 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~v 155 (621)
+..+-..|.++.=+|...+.++|+ |+.+++|....+.. +... ... ....|+.+.|+.+|+.+..+..||.+.+
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~----v~~~-rt~-g~s~vtr~~f~~qGnk~~i~d~dg~l~l 2277 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQ----VVCF-RTA-GNSRVTRSRFNHQGNKFGIVDGDGDLSL 2277 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEeccCCCe----EEEe-ecc-CcchhhhhhhcccCCceeeeccCCceee
Confidence 344556788888888888888877 99999999877631 1111 222 3378999999999999999999999999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe---CCCeEEEEECCCC---cEEEE
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS---VDNTAIMWDVHKG---KNLGI 229 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~---~dg~i~vwd~~~~---~~~~~ 229 (621)
|.+... . ....+.|......+.|-. ..+++++ .++.+.+||..-. ..+.
T Consensus 2278 ~q~~pk-~---------------------~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~- 2332 (2439)
T KOG1064|consen 2278 WQASPK-P---------------------YTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH- 2332 (2439)
T ss_pred cccCCc-c---------------------eeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee-
Confidence 998722 1 244567888888888875 5666654 3689999996432 2233
Q ss_pred eccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeec
Q psy15549 230 LTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
..|.+.++++++.|..+.|++|+.+|.|++||++..++.+.+
T Consensus 2333 -~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~ 2374 (2439)
T KOG1064|consen 2333 -TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTF 2374 (2439)
T ss_pred -eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHh
Confidence 679999999999999999999999999999999988776655
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.4e-08 Score=90.88 Aligned_cols=226 Identities=16% Similarity=0.283 Sum_probs=133.5
Q ss_pred ccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccC------------CCeEEEEECCCCC--EE
Q psy15549 80 HQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQ------------KAVNVVRFSPNGE--LL 144 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~------------~~V~~i~~sp~g~--~l 144 (621)
....|+++.|...|.||++|. .|.|.++.-.... ...++....+++|. ..|..+.|..++. .+
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~--~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hF 102 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSY--GCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHF 102 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeeccccc--ccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceE
Confidence 346799999999999999999 4556666544321 11234445555554 4678888876543 56
Q ss_pred EEEeCCCcEEEEEccCCCCCCCCCCCCcc------------------cccccc-ccee---eeeee-cCCCCCeEEEEEC
Q psy15549 145 ASGDDESTIIVWKQKTDQDLPEFPSSNLD------------------EENVNK-EHWI---VTKIL-RGHLEDVYDISWS 201 (621)
Q Consensus 145 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~------------------~~~~~~-~~~~---~~~~~-~~~~~~v~~i~~s 201 (621)
+..+.|.+|++|.+...... ..+..++. ...... .... +.+.. ..|.--|.++.|+
T Consensus 103 LlstNdktiKlWKiyeknlk-~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~N 181 (460)
T COG5170 103 LLSTNDKTIKLWKIYEKNLK-VVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFN 181 (460)
T ss_pred EEecCCceeeeeeeecccch-hhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeec
Confidence 66678999999998765221 11100000 000000 0000 11222 5688889999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCc---EEEEeccCC-----cceEEEEEcCCC-CEEEEEeCCCcEEEEEccCceeeeec
Q psy15549 202 PTSTHLISGSVDNTAIMWDVHKGK---NLGILTEHK-----KFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 202 pd~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~-----~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
.|...++++. |=.|.+|++.-.. .+..++.|. .-|++..|+|.. +.+.-.++.|.|++-|++...+--.-
T Consensus 182 sD~et~lSaD-dLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~ 260 (460)
T COG5170 182 SDKETLLSAD-DLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNS 260 (460)
T ss_pred Cchheeeecc-ceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCc
Confidence 9988888765 7789999986432 223334443 357888999954 55667778999999999854321100
Q ss_pred c-cCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 273 C-RSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 273 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
. .....+ + ....-........|..+.|+++|+|+++-
T Consensus 261 ~klfe~~~-------D-~v~~~ff~eivsSISD~kFs~ngryIlsR 298 (460)
T COG5170 261 KKLFELTI-------D-GVDVDFFEEIVSSISDFKFSDNGRYILSR 298 (460)
T ss_pred hhhhhhcc-------C-cccchhHHHHhhhhcceEEcCCCcEEEEe
Confidence 0 000000 0 00000111233457888999999988863
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.9e-07 Score=102.96 Aligned_cols=181 Identities=15% Similarity=0.144 Sum_probs=105.8
Q ss_pred cEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccc--eeccccccc-------CCCeEEEEECC-CCCEEEEEeCC
Q psy15549 83 AVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANV--EFASDLSRH-------QKAVNVVRFSP-NGELLASGDDE 150 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~--~~~~~~~~h-------~~~V~~i~~sp-~g~~l~s~s~d 150 (621)
....+++.+++..|+++. .+.|++++...+....... .......+. -...+.++|+| ++.++++.+.+
T Consensus 625 ~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~ 704 (1057)
T PLN02919 625 RPQGLAYNAKKNLLYVADTENHALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQ 704 (1057)
T ss_pred CCcEEEEeCCCCEEEEEeCCCceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCC
Confidence 467899999988766655 5568888875531100000 000000000 11345799999 56666777788
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEECCCCcEEEE
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI-SGSVDNTAIMWDVHKGKNLGI 229 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~-s~~~dg~i~vwd~~~~~~~~~ 229 (621)
+.|++||..++... .+....... ..+.. ......-.....|+++|+++.|+ +-+.++.|++||+.++.....
T Consensus 705 ~~I~v~d~~~g~v~-~~~G~G~~~-~~~g~-----~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~ 777 (1057)
T PLN02919 705 HQIWEYNISDGVTR-VFSGDGYER-NLNGS-----SGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLL 777 (1057)
T ss_pred CeEEEEECCCCeEE-EEecCCccc-cCCCC-----ccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEE
Confidence 99999998765421 110000000 00000 00001123467799999998554 455578999999987653211
Q ss_pred ec-------------cC--------CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeee
Q psy15549 230 LT-------------EH--------KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVIS 270 (621)
Q Consensus 230 ~~-------------~~--------~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~ 270 (621)
.. .+ .....+++++++|+.+++-..++.|++||..++....
T Consensus 778 ~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~t 839 (1057)
T PLN02919 778 AGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTT 839 (1057)
T ss_pred EecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEE
Confidence 10 00 1124688999999988888889999999998776543
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.1e-07 Score=85.04 Aligned_cols=241 Identities=16% Similarity=0.179 Sum_probs=151.3
Q ss_pred eEEEEECC-CCCEEEEEeCCC-cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEE
Q psy15549 132 VNVVRFSP-NGELLASGDDES-TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLIS 209 (621)
Q Consensus 132 V~~i~~sp-~g~~l~s~s~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s 209 (621)
...++.+| ....++.+-.-| ...+||..+++....+... ..+.+.+| -.||+||++|++
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~-------------~gRHFyGH------g~fs~dG~~Lyt 67 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAP-------------PGRHFYGH------GVFSPDGRLLYT 67 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCC-------------CCCEEecC------EEEcCCCCEEEE
Confidence 34678888 556777777666 4678999998876443211 01334455 579999999998
Q ss_pred EeC-----CCeEEEEECC-CCcEEEEeccCCcceEEEEEcCCCCEEEEEeC------------------CCcEEEEEccC
Q psy15549 210 GSV-----DNTAIMWDVH-KGKNLGILTEHKKFVQGVAWDPKNQYVATLSS------------------DRSLRTYSIQS 265 (621)
Q Consensus 210 ~~~-----dg~i~vwd~~-~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~------------------dg~i~iwd~~~ 265 (621)
.-. .|.|-|||.. +.+.+..+..|.-....+.+.|||+.|+++.. +..+...|..+
T Consensus 68 TEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~s 147 (305)
T PF07433_consen 68 TENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARS 147 (305)
T ss_pred eccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCC
Confidence 644 4899999998 67788888888777788999999988886631 22444555566
Q ss_pred ceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcc-eeeeeeeeecc---
Q psy15549 266 KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKP-ISVTHVFTRAC--- 341 (621)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~-~~~~~~~~~~~--- 341 (621)
|+++.+... ....+...|+.+++.++|..++..- +.+...- -.+........
T Consensus 148 G~ll~q~~L-------------------p~~~~~lSiRHLa~~~~G~V~~a~Q-----~qg~~~~~~PLva~~~~g~~~~ 203 (305)
T PF07433_consen 148 GALLEQVEL-------------------PPDLHQLSIRHLAVDGDGTVAFAMQ-----YQGDPGDAPPLVALHRRGGALR 203 (305)
T ss_pred Cceeeeeec-------------------CccccccceeeEEecCCCcEEEEEe-----cCCCCCccCCeEEEEcCCCcce
Confidence 665544321 1123455789999999998777654 2222110 00111111111
Q ss_pred -cCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc-CCcEEEEeCCCCceeEEEecccccceEEEE
Q psy15549 342 -LNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT-ENNILLYDTQHASPFAFIANIHYTKLTDIT 419 (621)
Q Consensus 342 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~ 419 (621)
...+.........++-+++++. +++.+++++- .+.+.+||..+++.+.... -..+..++
T Consensus 204 ~~~~p~~~~~~l~~Y~gSIa~~~----------------~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~---l~D~cGva 264 (305)
T PF07433_consen 204 LLPAPEEQWRRLNGYIGSIAADR----------------DGRLIAVTSPRGGRVAVWDAATGRLLGSVP---LPDACGVA 264 (305)
T ss_pred eccCChHHHHhhCCceEEEEEeC----------------CCCEEEEECCCCCEEEEEECCCCCEeeccc---cCceeeee
Confidence 1112222334456677777765 5566666664 6789999999999887663 23566777
Q ss_pred EcCCCCeEEEEeCCCcE
Q psy15549 420 WSSDGKVLIASSTDGYC 436 (621)
Q Consensus 420 ~spdg~~l~s~s~dg~i 436 (621)
-.+++ ++++.+. |.+
T Consensus 265 ~~~~~-f~~ssG~-G~~ 279 (305)
T PF07433_consen 265 PTDDG-FLVSSGQ-GQL 279 (305)
T ss_pred ecCCc-eEEeCCC-ccE
Confidence 77777 5665543 443
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.8e-10 Score=114.14 Aligned_cols=220 Identities=15% Similarity=0.241 Sum_probs=157.7
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
...|....+|++|+-+.+ +|+.|+..|.|+ ++++.++..... ..+|..+|+.+.
T Consensus 1097 frd~~~~fTc~afs~~~~-----hL~vG~~~Geik--------------~~nv~sG~~e~s-------~ncH~SavT~ve 1150 (1516)
T KOG1832|consen 1097 FRDETALFTCIAFSGGTN-----HLAVGSHAGEIK--------------IFNVSSGSMEES-------VNCHQSAVTLVE 1150 (1516)
T ss_pred hhccccceeeEEeecCCc-----eEEeeeccceEE--------------EEEccCcccccc-------cccccccccccc
Confidence 345677899999999998 999999999999 999988876554 889999999999
Q ss_pred EccCCCEEEEEc--CC-ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 89 FSPNGELLASGD--DV-GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 89 ~spdg~~las~~--d~-~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
-+.||..+++.+ .. -..+|++.... ...+.+. .-.++.|+.....-+.|.......+||+.++..+.
T Consensus 1151 Ps~dgs~~Ltsss~S~PlsaLW~~~s~~------~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~ 1220 (1516)
T KOG1832|consen 1151 PSVDGSTQLTSSSSSSPLSALWDASSTG------GPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQ 1220 (1516)
T ss_pred ccCCcceeeeeccccCchHHHhcccccc------Ccccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHH
Confidence 999998877755 22 46899987642 3333332 34578888765544555555678999999998765
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~ 245 (621)
++-. .. .+..-.-.++.|+|+..+++- || .+||++..+.++.|......+ .-.|+|+
T Consensus 1221 tylt----------------~~-~~~~y~~n~a~FsP~D~LIln---dG--vLWDvR~~~aIh~FD~ft~~~-~G~FHP~ 1277 (1516)
T KOG1832|consen 1221 TYLT----------------DT-VTSSYSNNLAHFSPCDTLILN---DG--VLWDVRIPEAIHRFDQFTDYG-GGGFHPS 1277 (1516)
T ss_pred HhcC----------------cc-hhhhhhccccccCCCcceEee---Cc--eeeeeccHHHHhhhhhheecc-cccccCC
Confidence 4310 00 111122267899998877763 55 589999888887775544333 3359999
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
|..++.-+. |||+++.++++....-. -..+.|+..|..++..
T Consensus 1278 g~eVIINSE-----IwD~RTF~lLh~VP~Ld-------------------------qc~VtFNstG~VmYa~ 1319 (1516)
T KOG1832|consen 1278 GNEVIINSE-----IWDMRTFKLLHSVPSLD-------------------------QCAVTFNSTGDVMYAM 1319 (1516)
T ss_pred CceEEeech-----hhhhHHHHHHhcCcccc-------------------------ceEEEeccCccchhhh
Confidence 999887664 99999988876653211 1568888888877653
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.4e-08 Score=84.02 Aligned_cols=218 Identities=13% Similarity=0.083 Sum_probs=142.0
Q ss_pred EEEeccccccCCcceEEEEecCCceEEeeeccCcccc------------------------------ccceeEEeccccc
Q psy15549 17 LSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRL------------------------------KTGKIWYLTERES 66 (621)
Q Consensus 17 ~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~------------------------------~~~~iw~~~~~~~ 66 (621)
..|.|-|-.--.++-+||.|+.-|...+|...+.+.. +++++.++..+..
T Consensus 71 ~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~ 150 (344)
T KOG4532|consen 71 TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSN 150 (344)
T ss_pred ecccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcc
Confidence 3456666443334558999999998887776532111 4566666654433
Q ss_pred cccceeeccccccccC--cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCE
Q psy15549 67 GIANVEFASDLSRHQK--AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGEL 143 (621)
Q Consensus 67 ~~~~~~~~~~~~~h~~--~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~ 143 (621)
.. ..|.. .++++++++|++++++.+ ...|..|.+...+..... ......++.=.+..|+.....
T Consensus 151 ~~---------~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~----~~~a~t~D~gF~~S~s~~~~~ 217 (344)
T KOG4532|consen 151 KF---------AVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIEN----IYEAPTSDHGFYNSFSENDLQ 217 (344)
T ss_pred cc---------eeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeee----eEecccCCCceeeeeccCcce
Confidence 22 22333 388999999999999877 667888888876542221 122333445567899998899
Q ss_pred EEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC--CEEEEEeCCCeEEEEEC
Q psy15549 144 LASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS--THLISGSVDNTAIMWDV 221 (621)
Q Consensus 144 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~--~~l~s~~~dg~i~vwd~ 221 (621)
+|++..||++.|||++.....-.. .......|.+.++.+.|++-| .+|+..-.-+.+.+.|+
T Consensus 218 FAv~~Qdg~~~I~DVR~~~tpm~~----------------~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~ 281 (344)
T KOG4532|consen 218 FAVVFQDGTCAIYDVRNMATPMAE----------------ISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDT 281 (344)
T ss_pred EEEEecCCcEEEEEecccccchhh----------------hcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEc
Confidence 999999999999999987643221 113345699999999999865 35555555788999999
Q ss_pred CCCcEEEEecc-------CC-cceEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy15549 222 HKGKNLGILTE-------HK-KFVQGVAWDPKNQYVATLSSDRSLRTYSIQ 264 (621)
Q Consensus 222 ~~~~~~~~~~~-------~~-~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~ 264 (621)
+++...+.+.. |. ..|..-.|+.++..+.+.+++ .+.-|++.
T Consensus 282 R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~ 331 (344)
T KOG4532|consen 282 RNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNEL-QGAEYNIL 331 (344)
T ss_pred ccCceeeEEecCccccccccccccccccccCCCcccccccch-hhheeecc
Confidence 99876554422 22 236666677666655555443 23344443
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=9e-09 Score=95.66 Aligned_cols=163 Identities=19% Similarity=0.186 Sum_probs=110.7
Q ss_pred eEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCE
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGEL 95 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~ 95 (621)
+..+..++.++ +||.+..+....+|++..... ..++|+..... ..-+++.|..+...
T Consensus 65 ~~~~~~s~~~~-----llAv~~~~K~~~~f~~~~~~~--~~kl~~~~~v~----------------~~~~ai~~~~~~~s 121 (390)
T KOG3914|consen 65 PALVLTSDSGR-----LVAVATSSKQRAVFDYRENPK--GAKLLDVSCVP----------------KRPTAISFIREDTS 121 (390)
T ss_pred ccccccCCCce-----EEEEEeCCCceEEEEEecCCC--cceeeeEeecc----------------cCcceeeeeeccce
Confidence 44556778887 888888887777554443332 22244333221 12233344443333
Q ss_pred EEEEc----CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 96 LASGD----DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 96 las~~----d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
...+. ...+.+|....+ ....+.||-..++.++|+||+++|+++..|..|+|-.......+..+
T Consensus 122 v~v~dkagD~~~~di~s~~~~--------~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesf---- 189 (390)
T KOG3914|consen 122 VLVADKAGDVYSFDILSADSG--------RCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESF---- 189 (390)
T ss_pred EEEEeecCCceeeeeeccccc--------CcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhh----
Confidence 33322 333455555432 23345689999999999999999999999999999887766554332
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
.-||..-|..++.-++ ..|++|+.|++|++||+.+|+.+.++
T Consensus 190 ----------------clGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L~t~ 231 (390)
T KOG3914|consen 190 ----------------CLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSGKLLDTC 231 (390)
T ss_pred ----------------ccccHhheeeeeeccC-ceeeecCCCCcEEEEecccCCccccc
Confidence 4589999999999865 46899999999999999999988655
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.1e-09 Score=102.13 Aligned_cols=218 Identities=14% Similarity=0.180 Sum_probs=149.5
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
.+|+..|.+++--.+.. -+++++.|.+|+ +|.+.........-....++..|+.+|.++-|
T Consensus 732 ~GH~~~iRai~AidNEN-----SFiSASkDKTVK--------------LWSik~EgD~~~tsaCQfTY~aHkk~i~~igf 792 (1034)
T KOG4190|consen 732 TGHQEKIRAIAAIDNEN-----SFISASKDKTVK--------------LWSIKPEGDEIGTSACQFTYQAHKKPIHDIGF 792 (1034)
T ss_pred cCcHHHhHHHHhccccc-----ceeeccCCceEE--------------EEEeccccCccccceeeeEhhhccCcccceee
Confidence 45777888887766665 899999999999 88887544433333345568899999999999
Q ss_pred ccCCCEEEEEcCCceEEEEeccCccccccceecccc---cccCCCeEEEEECC--CCCE-EEEEeCCCcEEEEEccCCCC
Q psy15549 90 SPNGELLASGDDVGKEIWYLTERESGIANVEFASDL---SRHQKAVNVVRFSP--NGEL-LASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 90 spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~---~~h~~~V~~i~~sp--~g~~-l~s~s~dg~i~vwd~~~~~~ 163 (621)
-.+-++++++ |+++.+||.-.+ ..+..+ ..| +.+..+..-+ +... ++-|+...+|+++|.+...-
T Consensus 793 L~~lr~i~Sc-D~giHlWDPFig-------r~Laq~~dapk~-~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~ 863 (1034)
T KOG4190|consen 793 LADLRSIASC-DGGIHLWDPFIG-------RLLAQMEDAPKE-GAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEW 863 (1034)
T ss_pred eeccceeeec-cCcceeeccccc-------chhHhhhcCccc-CCCceeEecccCcchheeeeccchhhheeeecccccc
Confidence 9998888765 788999997665 222211 122 2233333333 3333 34457888999999988875
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEc
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD 243 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~s 243 (621)
...+ . ...-.+....+++++..+.|+.++.+-..|.|.+.|.++|+.+..++.-.-....++ .
T Consensus 864 ~~E~---------------k-Vcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-a 926 (1034)
T KOG4190|consen 864 TCEL---------------K-VCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-A 926 (1034)
T ss_pred eeeE---------------E-eccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-C
Confidence 4322 0 011234557789999999999999999999999999999998887765444444443 3
Q ss_pred CCCCEEEEEeCCCcEEE-EEccCceeeeec
Q psy15549 244 PKNQYVATLSSDRSLRT-YSIQSKKVISRA 272 (621)
Q Consensus 244 p~~~~l~s~~~dg~i~i-wd~~~~~~~~~~ 272 (621)
|..+.|+....|.++.+ |..-.+....+.
T Consensus 927 psdq~L~~saldHslaVnWhaldgimh~q~ 956 (1034)
T KOG4190|consen 927 PSDQALAQSALDHSLAVNWHALDGIMHLQD 956 (1034)
T ss_pred chhHHHHhhcccceeEeeehhcCCeeeecc
Confidence 55556666666767766 766555544443
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.3e-08 Score=95.60 Aligned_cols=216 Identities=19% Similarity=0.231 Sum_probs=155.8
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
+-.+.|.+-|+.+..+-.. ++.+++.||.++ .|.-.. ....+++..+..|-+.|.+
T Consensus 3 eksymhrd~i~hv~~tka~------fiiqASlDGh~K--------------FWkKs~----isGvEfVKhFraHL~~I~s 58 (558)
T KOG0882|consen 3 EKSYMHRDVITHVFPTKAK------FIIQASLDGHKK--------------FWKKSR----ISGVEFVKHFRAHLGVILS 58 (558)
T ss_pred chhhcccceeeeEeeehhh------eEEeeecchhhh--------------hcCCCC----ccceeehhhhHHHHHHHHh
Confidence 3456788888888776554 999999999999 885432 2345667788999999999
Q ss_pred EEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEEC-CCCC---EEEE-EeCCCcEEEEEcc
Q psy15549 87 VRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFS-PNGE---LLAS-GDDESTIIVWKQK 159 (621)
Q Consensus 87 l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s-p~g~---~l~s-~s~dg~i~vwd~~ 159 (621)
++.+.+|.++.+.+ |..++++|+..-.- .....+..-.+. +.|. ..|. .|+. .-.+|.+.++|-.
T Consensus 59 l~~S~dg~L~~Sv~d~Dhs~KvfDvEn~Dm-----inmiKL~~lPg~---a~wv~skGd~~s~IAVs~~~sg~i~VvD~~ 130 (558)
T KOG0882|consen 59 LAVSYDGWLFRSVEDPDHSVKVFDVENFDM-----INMIKLVDLPGF---AEWVTSKGDKISLIAVSLFKSGKIFVVDGF 130 (558)
T ss_pred hhccccceeEeeccCcccceeEEEeeccch-----hhhcccccCCCc---eEEecCCCCeeeeEEeecccCCCcEEECCc
Confidence 99999999999965 78899999886521 111112222222 2232 2231 3433 3467899999976
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC------CcE-------
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK------GKN------- 226 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~------~~~------- 226 (621)
...+.. ...-.-|..+|.++.+++.+..+++....|.|.-|.... .+.
T Consensus 131 ~d~~q~-------------------~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~e 191 (558)
T KOG0882|consen 131 GDFCQD-------------------GYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHE 191 (558)
T ss_pred CCcCcc-------------------ceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCcccccccccccc
Confidence 655321 122346899999999999999999999999999998762 111
Q ss_pred --EEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 227 --LGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 227 --~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
+..+........++.|+|+|..+.+.+.|..|+++++.++++++.+.
T Consensus 192 TdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiD 240 (558)
T KOG0882|consen 192 TDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEID 240 (558)
T ss_pred chhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhh
Confidence 11122234567899999999999999999999999999999887775
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.2e-08 Score=89.20 Aligned_cols=146 Identities=16% Similarity=0.311 Sum_probs=95.1
Q ss_pred eEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc------CCce
Q psy15549 31 YRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD------DVGK 104 (621)
Q Consensus 31 ~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~------d~~v 104 (621)
+.+++++.||.+. +.+......... .+..-...-.+.++...+++|.++. -+..
T Consensus 102 t~V~~~~~dg~~~--------------v~s~~~~~~~~~------~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~ 161 (319)
T KOG4714|consen 102 NRVCIGYADGSLA--------------VFSTDKDLALMS------RIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNF 161 (319)
T ss_pred CceEecCCCceEE--------------EEechHHHhhhh------hcccccccccccceeecccEEecCCcceEeeccce
Confidence 3899999999999 555543111100 0111111122233334556666543 3345
Q ss_pred EEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCccccccccccee
Q psy15549 105 EIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWI 183 (621)
Q Consensus 105 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (621)
+.|++.... ..+.... -...|.+++-+| +...+++|+.||.+-+||+++....
T Consensus 162 ~a~~~~p~~------t~~~~~~-~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p------------------- 215 (319)
T KOG4714|consen 162 YANTLDPIK------TLIPSKK-ALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMP------------------- 215 (319)
T ss_pred eeecccccc------ccccccc-ccccchhhhCCcccccEEEEecCCCeEEEEEcccccch-------------------
Confidence 667665442 1111111 223488999999 4557778889999999999988543
Q ss_pred eeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCC
Q psy15549 184 VTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHK 223 (621)
Q Consensus 184 ~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~ 223 (621)
...+..|+..++.+-|+| ++..|+++++||.+..||..+
T Consensus 216 -~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 216 -VSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred -HHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 355789999999999999 678999999999999999763
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.2e-09 Score=104.77 Aligned_cols=208 Identities=18% Similarity=0.331 Sum_probs=142.5
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
++++|...|+.+-|+|..+ ..|++++-|..|..||+..+... ++ ........-..|
T Consensus 109 ~lhghsraitd~n~~~q~p----dVlatcsvdt~vh~wd~rSp~~p----~y----------------s~~~w~s~asqV 164 (1081)
T KOG0309|consen 109 VLHGHSRAITDINFNPQHP----DVLATCSVDTYVHAWDMRSPHRP----FY----------------STSSWRSAASQV 164 (1081)
T ss_pred EEecCccceeccccCCCCC----cceeeccccccceeeeccCCCcc----ee----------------eeecccccCcee
Confidence 5677999999999999987 69999999999994444443333 22 122233455678
Q ss_pred EEcc-CCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 88 RFSP-NGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 88 ~~sp-dg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
+|+. ++..||+...+.|.+|+...++ .++..+++|...|+.++|.. ....+.+++.||+|+.||......-.
T Consensus 165 kwnyk~p~vlasshg~~i~vwd~r~gs------~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~ 238 (1081)
T KOG0309|consen 165 KWNYKDPNVLASSHGNDIFVWDLRKGS------TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTES 238 (1081)
T ss_pred eecccCcchhhhccCCceEEEeccCCC------cceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccccc
Confidence 8986 6777887778889999999886 66778888999999999976 34578899999999999987654321
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCC--EEEE--E-------eCCCeEEEEECCC-CcEEEEeccC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST--HLIS--G-------SVDNTAIMWDVHK-GKNLGILTEH 233 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~--~l~s--~-------~~dg~i~vwd~~~-~~~~~~~~~~ 233 (621)
........+|+--.+.|-|. ++.- | ..+.....|+..+ .+++++|.+|
T Consensus 239 --------------------~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH 298 (1081)
T KOG0309|consen 239 --------------------KRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGH 298 (1081)
T ss_pred --------------------ceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCc
Confidence 11122233444445555322 1111 1 1122233444433 4678999999
Q ss_pred CcceEEEEEcCCC----------CEEEEEeCCCcEEEEEccC
Q psy15549 234 KKFVQGVAWDPKN----------QYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 234 ~~~v~~l~~sp~~----------~~l~s~~~dg~i~iwd~~~ 265 (621)
...|..+.|-..+ -.|++-+.|..+++|-+.+
T Consensus 299 ~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 299 DDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred chHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence 9988776664322 2489999999999997754
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.90 E-value=9.5e-07 Score=89.04 Aligned_cols=188 Identities=15% Similarity=0.117 Sum_probs=102.3
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEcCCceEEEEecc
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTE 111 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~ 111 (621)
.+++++.+|.+..+|..+.+. +|...... .+.+.....++.+++...++.+..||..+
T Consensus 107 ~v~v~~~~g~l~ald~~tG~~-----~W~~~~~~-----------------~~~~~p~v~~~~v~v~~~~g~l~a~d~~t 164 (377)
T TIGR03300 107 LVFVGTEKGEVIALDAEDGKE-----LWRAKLSS-----------------EVLSPPLVANGLVVVRTNDGRLTALDAAT 164 (377)
T ss_pred EEEEEcCCCEEEEEECCCCcE-----eeeeccCc-----------------eeecCCEEECCEEEEECCCCeEEEEEcCC
Confidence 777888888888555444332 44332211 11111111234444444477788888876
Q ss_pred CccccccceecccccccCCCe-----EEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeee
Q psy15549 112 RESGIANVEFASDLSRHQKAV-----NVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTK 186 (621)
Q Consensus 112 ~~~~~~~~~~~~~~~~h~~~V-----~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (621)
+. .+..+......+ ..... .+..++.+..++.+..+|+.+++.+......
T Consensus 165 G~-------~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~---------------- 219 (377)
T TIGR03300 165 GE-------RLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVA---------------- 219 (377)
T ss_pred Cc-------eeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccc----------------
Confidence 63 222111111100 01111 1246778888899999999888754221100
Q ss_pred eecCCC--CCeEEEEECC--CCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy15549 187 ILRGHL--EDVYDISWSP--TSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYS 262 (621)
Q Consensus 187 ~~~~~~--~~v~~i~~sp--d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd 262 (621)
...+.. .....+.-+| .+..+++++.+|.++.||..+|+.+..... . ....+. ..+..+++++.+|.|..+|
T Consensus 220 ~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~-~-~~~~p~--~~~~~vyv~~~~G~l~~~d 295 (377)
T TIGR03300 220 LPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDA-S-SYQGPA--VDDNRLYVTDADGVVVALD 295 (377)
T ss_pred cCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeecc-C-CccCce--EeCCEEEEECCCCeEEEEE
Confidence 000000 0000011111 245788888899999999999988766542 1 122222 2467788888999999999
Q ss_pred ccCceeee
Q psy15549 263 IQSKKVIS 270 (621)
Q Consensus 263 ~~~~~~~~ 270 (621)
..+++.+.
T Consensus 296 ~~tG~~~W 303 (377)
T TIGR03300 296 RRSGSELW 303 (377)
T ss_pred CCCCcEEE
Confidence 98887654
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.3e-07 Score=79.42 Aligned_cols=180 Identities=12% Similarity=0.070 Sum_probs=117.7
Q ss_pred EEEEEcc-----CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEE
Q psy15549 85 NVVRFSP-----NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWK 157 (621)
Q Consensus 85 ~~l~~sp-----dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd 157 (621)
..+.|-| ..-+||.|+ .+...+|...+.. ........|...|.-+.=..+ .--+..++.|.++++.+
T Consensus 71 ~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~------~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~ 144 (344)
T KOG4532|consen 71 TGMTFTPGSFINKCVTLADGGASGQFDLFACNTND------GHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMV 144 (344)
T ss_pred ecccccchHhhccccEEEeccccceeeeecccCcc------cceeeecccccchhhhhhhcccccceeeccCCcceeEEE
Confidence 3455555 345777775 8889999988654 223333334433332221112 22466778888899888
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCC--CeEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EE-E-Eecc
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLE--DVYDISWSPTSTHLISGSVDNTAIMWDVHKGK-NL-G-ILTE 232 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~-~~-~-~~~~ 232 (621)
++.+.... ..|.. .+.++++++|++++++.+....|..|.+.... .+ . ....
T Consensus 145 ~~~~s~~~-----------------------~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~ 201 (344)
T KOG4532|consen 145 VSGDSNKF-----------------------AVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAP 201 (344)
T ss_pred EecCcccc-----------------------eeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecc
Confidence 87665321 12322 37899999999999999999999999986532 22 2 1222
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 311 (621)
....--+..|+.....+|++..||++.|||++.......... ...+.+++.++.+.|++-|
T Consensus 202 t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~s------------------strp~hnGa~R~c~Fsl~g 262 (344)
T KOG4532|consen 202 TSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEIS------------------STRPHHNGAFRVCRFSLYG 262 (344)
T ss_pred cCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhc------------------ccCCCCCCceEEEEecCCC
Confidence 333445788999999999999999999999987654332221 1234577888899998854
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.4e-06 Score=78.22 Aligned_cols=205 Identities=12% Similarity=0.099 Sum_probs=119.4
Q ss_pred eEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC--
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG-- 93 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg-- 93 (621)
=+-++||||+. .||.+...|.|++||+.... ++.+...... ...-...|..+.|-+-.
T Consensus 46 WRkl~WSpD~t-----lLa~a~S~G~i~vfdl~g~~------lf~I~p~~~~---------~~d~~~Aiagl~Fl~~~~s 105 (282)
T PF15492_consen 46 WRKLAWSPDCT-----LLAYAESTGTIRVFDLMGSE------LFVIPPAMSF---------PGDLSDAIAGLIFLEYKKS 105 (282)
T ss_pred heEEEECCCCc-----EEEEEcCCCeEEEEecccce------eEEcCccccc---------CCccccceeeeEeeccccc
Confidence 36789999998 99999999999977665433 4444322110 11234677777775532
Q ss_pred -----CEEEEEcCCceEEEEeccCccccccceeccccc---ccCCCeEEEEECCCCCEEEEEeCCCc-----------EE
Q psy15549 94 -----ELLASGDDVGKEIWYLTERESGIANVEFASDLS---RHQKAVNVVRFSPNGELLASGDDEST-----------II 154 (621)
Q Consensus 94 -----~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~---~h~~~V~~i~~sp~g~~l~s~s~dg~-----------i~ 154 (621)
.+|+..-++.++-|.+..+... .+...+.+. .+...|.++.|+|..++|+.|+.... +.
T Consensus 106 ~~ws~ELlvi~Y~G~L~Sy~vs~gt~q--~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLt 183 (282)
T PF15492_consen 106 AQWSYELLVINYRGQLRSYLVSVGTNQ--GYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLT 183 (282)
T ss_pred cccceeEEEEeccceeeeEEEEcccCC--cceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCce
Confidence 4556666877777776432110 122233322 35679999999999888888764322 22
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCC
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHK 234 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 234 (621)
.|.+-++.+ | ...+. +-+...-..... ..+|.+-+.+.........
T Consensus 184 aWRiL~~~P---------------------------y---yk~v~-~~~~~~~~~~~~---~~~~~~~~~~~fs~~~~~~ 229 (282)
T PF15492_consen 184 AWRILSDSP---------------------------Y---YKQVT-SSEDDITASSKR---RGLLRIPSFKFFSRQGQEQ 229 (282)
T ss_pred EEEEcCCCC---------------------------c---EEEcc-ccCccccccccc---cceeeccceeeeeccccCC
Confidence 222222111 0 00000 101111111111 2233333322222223356
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCC
Q psy15549 235 KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSK 276 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 276 (621)
..|..|..||||..|++...+|.|.+|++.+..+........
T Consensus 230 d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~e 271 (282)
T PF15492_consen 230 DGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDE 271 (282)
T ss_pred CceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhh
Confidence 779999999999999999999999999999888777665443
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.9e-06 Score=79.79 Aligned_cols=224 Identities=17% Similarity=0.138 Sum_probs=127.9
Q ss_pred EEEECC-CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEEC-CCCCEEEEEe
Q psy15549 134 VVRFSP-NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS-PTSTHLISGS 211 (621)
Q Consensus 134 ~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s-pd~~~l~s~~ 211 (621)
++.|.+ ++.++++--..+.|..|+..++.. ....... ...+++. +++ .|+.+.
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~----------------------~~~~~~~--~~G~~~~~~~g-~l~v~~ 58 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEV----------------------EVIDLPG--PNGMAFDRPDG-RLYVAD 58 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEE----------------------EEEESSS--EEEEEEECTTS-EEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeE----------------------EEEecCC--CceEEEEccCC-EEEEEE
Confidence 578888 666777766789999999888753 1112222 6777777 565 555555
Q ss_pred CCCeEEEEECCCCcEEEEecc-----CCcceEEEEEcCCCCEEEEEeCC--------CcEEEEEccCceeeeecccCCCC
Q psy15549 212 VDNTAIMWDVHKGKNLGILTE-----HKKFVQGVAWDPKNQYVATLSSD--------RSLRTYSIQSKKVISRACRSKLP 278 (621)
Q Consensus 212 ~dg~i~vwd~~~~~~~~~~~~-----~~~~v~~l~~sp~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~ 278 (621)
..+ +.++|+.+++....... .......+++.|+|++.++.... |.|..++.. ++.......
T Consensus 59 ~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~---- 132 (246)
T PF08450_consen 59 SGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADG---- 132 (246)
T ss_dssp TTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEE----
T ss_pred cCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecC----
Confidence 544 56669988865443332 34567889999999977765543 456677766 443222211
Q ss_pred CCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceee
Q psy15549 279 VDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVA 358 (621)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (621)
-...+.++|+||++.|+++.. ..+.+..+++...............+.......-.
T Consensus 133 --------------------~~~pNGi~~s~dg~~lyv~ds----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG 188 (246)
T PF08450_consen 133 --------------------LGFPNGIAFSPDGKTLYVADS----FNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDG 188 (246)
T ss_dssp --------------------ESSEEEEEEETTSSEEEEEET----TTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEE
T ss_pred --------------------cccccceEECCcchheeeccc----ccceeEEEeccccccceeeeeeEEEcCCCCcCCCc
Confidence 112378999999998876542 33333333332100000000000011111111111
Q ss_pred eeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEE-cCCCCeEEEE
Q psy15549 359 VKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITW-SSDGKVLIAS 430 (621)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~-spdg~~l~s~ 430 (621)
+ ++..+|+..++....+.|.++|.. |+.+..+... ...+++++| .++.+.|+..
T Consensus 189 ~----------------~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p-~~~~t~~~fgg~~~~~L~vT 243 (246)
T PF08450_consen 189 L----------------AVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELP-VPRPTNCAFGGPDGKTLYVT 243 (246)
T ss_dssp E----------------EEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-S-SSSEEEEEEESTTSSEEEEE
T ss_pred c----------------eEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCC-CCCEEEEEEECCCCCEEEEE
Confidence 1 223356777777789999999988 8888877654 458999999 4676655544
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.4e-08 Score=84.70 Aligned_cols=207 Identities=15% Similarity=0.189 Sum_probs=118.1
Q ss_pred eEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCE
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGEL 95 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~ 95 (621)
|+.+.|+.+- .|+++..++.+..+-.-...+. ..|.-..+-. ....+..|+++-.+-+.+-.++.
T Consensus 39 ~~~~~~v~~~------~lf~~e~~~~~ss~g~~r~~~~---~~~~rt~~i~------~~~~~a~~sep~p~~~~s~~~t~ 103 (319)
T KOG4714|consen 39 LSKVSLSAEY------ILFTGETSSQIISLGKGRGRCI---SLWERDDGID------PFKVLAKNSEIDPNDACTMTDNR 103 (319)
T ss_pred EEEeechhhh------eeecccchhheeeeccceEEEe---chhhcccCcC------ceeeeeccCCCCCcccccccCCc
Confidence 7777787775 7888887777663322111111 0222222111 11122333333333333444666
Q ss_pred EEEEc-CCceEEEEeccCccccccceecccccc-cCCCeEEEEECCCCCEEEEEeC-----CCcEEEEEccCCCCCCCCC
Q psy15549 96 LASGD-DVGKEIWYLTERESGIANVEFASDLSR-HQKAVNVVRFSPNGELLASGDD-----ESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 96 las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~i~~sp~g~~l~s~s~-----dg~i~vwd~~~~~~~~~~~ 168 (621)
++++. |+.+.+++.+..- ...+.+.. |.+ -.+.+....+++|.++.. -+..+.|+++..+...
T Consensus 104 V~~~~~dg~~~v~s~~~~~------~~~~~i~~~~~~-~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~--- 173 (319)
T KOG4714|consen 104 VCIGYADGSLAVFSTDKDL------ALMSRIPSIHSG-SASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLI--- 173 (319)
T ss_pred eEecCCCceEEEEechHHH------hhhhhccccccc-ccccceeecccEEecCCcceEeeccceeeeccccccccc---
Confidence 77776 7778888776421 11111111 111 112223334555554431 2244555555443221
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcE-EEEeccCCcceEEEEEcC-C
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHKGKN-LGILTEHKKFVQGVAWDP-K 245 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~l~~sp-~ 245 (621)
.-......|.+++-+|. ..++++|+.||.+-+||.+.... ...+..|..++..+-|+| +
T Consensus 174 ------------------~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~ 235 (319)
T KOG4714|consen 174 ------------------PSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKN 235 (319)
T ss_pred ------------------ccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCC
Confidence 00111233899999994 45677888899999999988743 344578999999999999 5
Q ss_pred CCEEEEEeCCCcEEEEEccC
Q psy15549 246 NQYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~ 265 (621)
+..|+++++||.+-.||..+
T Consensus 236 p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 236 PEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred chheeEecCCCcEEEEcCCC
Confidence 67899999999999999865
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.9e-06 Score=86.38 Aligned_cols=209 Identities=15% Similarity=0.153 Sum_probs=124.3
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
.|.--+++..++ +++.|+.-|.+. +++-..+..... ...+-.+.+..+..|++..
T Consensus 35 ~v~lTc~dst~~-----~l~~GsS~G~ly--------------l~~R~~~~~~~~------~~~~~~~~~~~~~vs~~e~ 89 (726)
T KOG3621|consen 35 RVKLTCVDATEE-----YLAMGSSAGSVY--------------LYNRHTGEMRKL------KNEGATGITCVRSVSSVEY 89 (726)
T ss_pred eEEEEEeecCCc-----eEEEecccceEE--------------EEecCchhhhcc------cccCccceEEEEEecchhH
Confidence 455556666777 999999999999 888777765443 2333455667777899999
Q ss_pred EEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCccc
Q psy15549 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDE 174 (621)
Q Consensus 95 ~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 174 (621)
++|.|++++...|................--..|...|++++|++++..+++|...|+|.+-.++.. .....
T Consensus 90 lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~-~~~~~------- 161 (726)
T KOG3621|consen 90 LVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSR-QAFLS------- 161 (726)
T ss_pred hhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechh-hhhcc-------
Confidence 9999986665444433333222222222222348889999999999999999999999999988873 11111
Q ss_pred ccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe--ccCCcc-eEEEEEcCC----CC
Q psy15549 175 ENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL--TEHKKF-VQGVAWDPK----NQ 247 (621)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~-v~~l~~sp~----~~ 247 (621)
..+.+..-.+.|..+.+. ++.+|++.... ..+++.+.+. +..+ +...+. -...+|-|. .+
T Consensus 162 ---------~~q~il~~ds~IVQlD~~-q~~LLVStl~r--~~Lc~tE~et-i~QIG~k~R~~~~~~GACF~~g~~~~q~ 228 (726)
T KOG3621|consen 162 ---------KSQEILSEDSEIVQLDYL-QSYLLVSTLTR--CILCQTEAET-ITQIGKKPRKSLIDFGACFFPGQCKAQK 228 (726)
T ss_pred ---------ccceeeccCcceEEeecc-cceehHhhhhh--hheeecchhH-HHHhcCCCcCCccccceEEeeccccCCC
Confidence 013334456778888876 34444443322 3445554332 1111 111121 123445553 23
Q ss_pred EEEEEeCCCcEEEEEccC-ceeee
Q psy15549 248 YVATLSSDRSLRTYSIQS-KKVIS 270 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd~~~-~~~~~ 270 (621)
-++.++.-| .|+|..+- |..++
T Consensus 229 ~~IycaRPG-~RlWead~~G~V~~ 251 (726)
T KOG3621|consen 229 PQIYCARPG-LRLWEADFAGEVIK 251 (726)
T ss_pred ceEEEecCC-CceEEeecceeEEE
Confidence 344455555 58887753 44443
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.6e-06 Score=77.86 Aligned_cols=219 Identities=15% Similarity=0.174 Sum_probs=137.1
Q ss_pred EEeccc-cccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEc-cCCCE
Q psy15549 18 SVDIQL-KQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFS-PNGEL 95 (621)
Q Consensus 18 ~l~~sp-d~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s-pdg~~ 95 (621)
+++|.+ ++. ++++-...+.|. .|+..++.... +. ......+++. +++.+
T Consensus 4 gp~~d~~~g~-----l~~~D~~~~~i~--------------~~~~~~~~~~~--------~~--~~~~~G~~~~~~~g~l 54 (246)
T PF08450_consen 4 GPVWDPRDGR-----LYWVDIPGGRIY--------------RVDPDTGEVEV--------ID--LPGPNGMAFDRPDGRL 54 (246)
T ss_dssp EEEEETTTTE-----EEEEETTTTEEE--------------EEETTTTEEEE--------EE--SSSEEEEEEECTTSEE
T ss_pred ceEEECCCCE-----EEEEEcCCCEEE--------------EEECCCCeEEE--------Ee--cCCCceEEEEccCCEE
Confidence 567887 554 777777788888 77766554321 11 1126777777 66555
Q ss_pred EEEEcCCceEEEEeccCccccccceecccc--cc-cCCCeEEEEECCCCCEEEEEeCC--------CcEEEEEccCCCCC
Q psy15549 96 LASGDDVGKEIWYLTERESGIANVEFASDL--SR-HQKAVNVVRFSPNGELLASGDDE--------STIIVWKQKTDQDL 164 (621)
Q Consensus 96 las~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~-h~~~V~~i~~sp~g~~l~s~s~d--------g~i~vwd~~~~~~~ 164 (621)
+++ ..+++.+++...+. +..+... .. .....+.+++.|+|++.++.... |.|..++.. ++.
T Consensus 55 ~v~-~~~~~~~~d~~~g~-----~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~- 126 (246)
T PF08450_consen 55 YVA-DSGGIAVVDPDTGK-----VTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKV- 126 (246)
T ss_dssp EEE-ETTCEEEEETTTTE-----EEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEE-
T ss_pred EEE-EcCceEEEecCCCc-----EEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeE-
Confidence 555 45666777776652 1222222 11 34578899999999977775533 446666655 221
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEECCCCcE-------EEEeccCCcc
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI-SGSVDNTAIMWDVHKGKN-------LGILTEHKKF 236 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~-s~~~dg~i~vwd~~~~~~-------~~~~~~~~~~ 236 (621)
......-.....|+|+|+++.|+ +-+..+.|..+++..... ...+....+.
T Consensus 127 ---------------------~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~ 185 (246)
T PF08450_consen 127 ---------------------TVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGY 185 (246)
T ss_dssp ---------------------EEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCE
T ss_pred ---------------------EEEecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcC
Confidence 22223345578999999998776 456678899999863221 2222223334
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee-cCCCCeEE
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF-SPDGQLLI 315 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-spdg~~l~ 315 (621)
.-.+++..+|++.++....+.|.+++.. ++.+..+... ...+++++| -++.+.|+
T Consensus 186 pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p-----------------------~~~~t~~~fgg~~~~~L~ 241 (246)
T PF08450_consen 186 PDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELP-----------------------VPRPTNCAFGGPDGKTLY 241 (246)
T ss_dssp EEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-S-----------------------SSSEEEEEEESTTSSEEE
T ss_pred CCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCC-----------------------CCCEEEEEEECCCCCEEE
Confidence 7789999999988877788999999987 7777666422 124588999 46777776
Q ss_pred ecc
Q psy15549 316 APS 318 (621)
Q Consensus 316 ~~s 318 (621)
+.+
T Consensus 242 vTt 244 (246)
T PF08450_consen 242 VTT 244 (246)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.7e-05 Score=67.26 Aligned_cols=186 Identities=11% Similarity=0.058 Sum_probs=99.7
Q ss_pred eEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEe
Q psy15549 31 YRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYL 109 (621)
Q Consensus 31 ~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~ 109 (621)
++++.|+..+.+.-.|.++.+. +|...-+ ..|-+-+.- -|.+++.|. .+++.+.+.
T Consensus 24 T~v~igSHs~~~~avd~~sG~~-----~We~ilg-----------------~RiE~sa~v-vgdfVV~GCy~g~lYfl~~ 80 (354)
T KOG4649|consen 24 TLVVIGSHSGIVIAVDPQSGNL-----IWEAILG-----------------VRIECSAIV-VGDFVVLGCYSGGLYFLCV 80 (354)
T ss_pred eEEEEecCCceEEEecCCCCcE-----EeehhhC-----------------ceeeeeeEE-ECCEEEEEEccCcEEEEEe
Confidence 5888999999988555444443 4543222 122221111 366777777 888888888
Q ss_pred ccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeec
Q psy15549 110 TERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR 189 (621)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (621)
.+++ ....+..-..-=......+++.++..|+.|++.+..|..+..++... +
T Consensus 81 ~tGs-------~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyks---------------------k 132 (354)
T KOG4649|consen 81 KTGS-------QIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKS---------------------K 132 (354)
T ss_pred cchh-------heeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEec---------------------c
Confidence 8773 22222211111112345678999999999999999999988765322 2
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC--CcceEE--EEEcCCCCEEEEEeCCCcEEEEEccC
Q psy15549 190 GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH--KKFVQG--VAWDPKNQYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 190 ~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~~v~~--l~~sp~~~~l~s~~~dg~i~iwd~~~ 265 (621)
-..+...+-+..|-...|..+...|.+.--...+... ..+-.| .++|.+ ++. +..+..+.-||.+.-++ ..
T Consensus 133 cgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~-~~~w~~~~~~PiF~splcv---~~sv~i~~VdG~l~~f~-~s 207 (354)
T KOG4649|consen 133 CGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSS-TEFWAATRFGPIFASPLCV---GSSVIITTVDGVLTSFD-ES 207 (354)
T ss_pred cCCceeccceecCCCceEEEEeccceEEEEccCCCCc-ceehhhhcCCccccCceec---cceEEEEEeccEEEEEc-CC
Confidence 2222233344555223444455556555554444311 112111 222211 111 34455566677777776 45
Q ss_pred ceeeeec
Q psy15549 266 KKVISRA 272 (621)
Q Consensus 266 ~~~~~~~ 272 (621)
|+.+.+.
T Consensus 208 G~qvwr~ 214 (354)
T KOG4649|consen 208 GRQVWRP 214 (354)
T ss_pred CcEEEee
Confidence 5555543
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.2e-07 Score=86.39 Aligned_cols=157 Identities=12% Similarity=0.149 Sum_probs=118.8
Q ss_pred CCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 93 GELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 93 g~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
|-.+++|.+.++-+-++.++. .+.+. ....|.++.|...+++++.|...|.|..+|++....-..
T Consensus 225 gyhfs~G~sqqv~L~nvetg~--------~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~------ 289 (425)
T KOG2695|consen 225 GYHFSVGLSQQVLLTNVETGH--------QQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNG------ 289 (425)
T ss_pred eeeecccccceeEEEEeeccc--------ccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCC------
Confidence 334455668888888888763 22232 567899999999899999999999999999988743211
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcE---EEEeccCCcceEEE--EEcCCC
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKN---LGILTEHKKFVQGV--AWDPKN 246 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~~v~~l--~~sp~~ 246 (621)
|. ....-|.+.|+++..-. ++++|++.+.+|.|.+||++--++ +.+..+|-..-.-+ -..+..
T Consensus 290 ---------~~--a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~ee 358 (425)
T KOG2695|consen 290 ---------WC--AQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEE 358 (425)
T ss_pred ---------cc--eEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeeccccccccccccccccc
Confidence 11 22335888999998877 788999999999999999987666 78888885543322 334566
Q ss_pred CEEEEEeCCCcEEEEEccCceeeeecccC
Q psy15549 247 QYVATLSSDRSLRTYSIQSKKVISRACRS 275 (621)
Q Consensus 247 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 275 (621)
..+++++.|...|||.++.+.++.++...
T Consensus 359 g~I~s~GdDcytRiWsl~~ghLl~tipf~ 387 (425)
T KOG2695|consen 359 GSIFSVGDDCYTRIWSLDSGHLLCTIPFP 387 (425)
T ss_pred ceEEEccCeeEEEEEecccCceeeccCCC
Confidence 77888999999999999999998887543
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.7e-06 Score=84.02 Aligned_cols=312 Identities=12% Similarity=0.007 Sum_probs=160.5
Q ss_pred ccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccc-cc------cCcEEEEEEc---
Q psy15549 21 IQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLS-RH------QKAVNVVRFS--- 90 (621)
Q Consensus 21 ~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~-~h------~~~V~~l~~s--- 90 (621)
+-|-|+.|.++.+.+|+..|.|+||=+.+.+.+..|-+++......--..-+....+. ++ .+......+|
T Consensus 57 ~v~pg~~deyy~f~SgG~sG~~~v~G~PSmr~l~~ipvf~~~~~~G~G~~~esk~~l~~~~~~~~~~~gD~HHp~~s~t~ 136 (635)
T PRK02888 57 EVAPGELDEYYGFWSGGHSGEVRILGLPSMRELMRIPVFNRDSATGWGITNESKKVLGEGARGGKYLNGDTHHPHMSFTD 136 (635)
T ss_pred cCCCCCcccEEEEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHhhccccCCcccCCCcCCCcccccC
Confidence 4556777888999999999999999999999998888887654221100000111111 11 0111112222
Q ss_pred --cCCCEEEEEc--CCceEEEEeccCccc-cccceecccc-------cccCCCeEE-----EEECCCCCEEEEE-eCCCc
Q psy15549 91 --PNGELLASGD--DVGKEIWYLTERESG-IANVEFASDL-------SRHQKAVNV-----VRFSPNGELLASG-DDEST 152 (621)
Q Consensus 91 --pdg~~las~~--d~~v~iw~~~~~~~~-~~~~~~~~~~-------~~h~~~V~~-----i~~sp~g~~l~s~-s~dg~ 152 (621)
.||++|..-. ...|...++..-+.. +......+.. ..+++.|.+ +=++|||+.+... -..+.
T Consensus 137 g~ydGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~ 216 (635)
T PRK02888 137 GTYDGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSL 216 (635)
T ss_pred CccceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEE
Confidence 3788998877 334444444432110 0000000000 011222221 1133455443222 22345
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC----CeEEEEECCCCcEEE
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD----NTAIMWDVHKGKNLG 228 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d----g~i~vwd~~~~~~~~ 228 (621)
+.+.|..+.+.. ....- ......++++++|+++++.+.+ .++...+..+...+.
T Consensus 217 vSvID~etmeV~---------------------~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~v 274 (635)
T PRK02888 217 FTAVDAETMEVA---------------------WQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVV 274 (635)
T ss_pred EEEEECccceEE---------------------EEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEE
Confidence 555665554322 11111 2244678899999999888632 233333332222111
Q ss_pred EeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccC-----ceeeeecccCCCCCCCccccccccccccccCCccccee
Q psy15549 229 ILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQS-----KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303 (621)
Q Consensus 229 ~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 303 (621)
.+.-. .+ -++.++|++... .++.|.+.|..+ ...+..+.... ..+
T Consensus 275 vfni~--~i--ea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGK------------------------sPH 324 (635)
T PRK02888 275 VFNIA--RI--EEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPK------------------------NPH 324 (635)
T ss_pred EEchH--HH--HHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEEEECCC------------------------Ccc
Confidence 21110 01 133457887665 367899999987 34555443222 237
Q ss_pred eeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcE
Q psy15549 304 RLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRI 383 (621)
Q Consensus 304 ~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (621)
.+.++|||+++++++. .+.++.++++......
T Consensus 325 GV~vSPDGkylyVank----lS~tVSVIDv~k~k~~-------------------------------------------- 356 (635)
T PRK02888 325 GVNTSPDGKYFIANGK----LSPTVTVIDVRKLDDL-------------------------------------------- 356 (635)
T ss_pred ceEECCCCCEEEEeCC----CCCcEEEEEChhhhhh--------------------------------------------
Confidence 8999999999998874 3444444443311000
Q ss_pred EEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 384 VIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 384 l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
-++.| +.+ ......+.. .......+|.++|....|...|..|..|++..
T Consensus 357 -----~~~~~---~~~-~~vvaevev--GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 357 -----FDGKI---KPR-DAVVAEPEL--GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred -----hhccC---Ccc-ceEEEeecc--CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 00000 000 001222221 22345778999998888888999999999986
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.7e-07 Score=94.62 Aligned_cols=108 Identities=13% Similarity=0.195 Sum_probs=81.9
Q ss_pred CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q psy15549 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMW 219 (621)
Q Consensus 140 ~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vw 219 (621)
++..++.|+....+..+|+.+.+..+ ...-..+.|.-+.. +++++.+|...|+|.+-
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r---------------------~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~Lr 202 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETR---------------------TTNVSASGVTIMRY--NNRNLFCGDTRGTVFLR 202 (1118)
T ss_pred CCcceeecchhhheeeeecccceeee---------------------eeeccCCceEEEEe--cCcEEEeecccceEEee
Confidence 34467777777788889998887542 22222333555554 57899999999999999
Q ss_pred ECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeC---------CCcEEEEEccCceeeeec
Q psy15549 220 DVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS---------DRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 220 d~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~ 272 (621)
|.++.+.++++..|.+.|..+.. .|+.|++++. |..|++||++..+.+.-+
T Consensus 203 D~~s~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI 262 (1118)
T KOG1275|consen 203 DPNSFETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPI 262 (1118)
T ss_pred cCCcCceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCc
Confidence 99999999999999999976554 5999999875 567899999987665433
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.6e-08 Score=102.72 Aligned_cols=168 Identities=15% Similarity=0.225 Sum_probs=124.3
Q ss_pred ceeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe
Q psy15549 70 NVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD 148 (621)
Q Consensus 70 ~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s 148 (621)
.+.....+..|....+|++|+-+.++|+.|+ .|.|+++++..+ .......+|...|+.+.=+.+|..+++.+
T Consensus 1090 RFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG-------~~e~s~ncH~SavT~vePs~dgs~~Ltss 1162 (1516)
T KOG1832|consen 1090 RFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSG-------SMEESVNCHQSAVTLVEPSVDGSTQLTSS 1162 (1516)
T ss_pred hcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCc-------cccccccccccccccccccCCcceeeeec
Confidence 3444567888999999999999999999998 899999999988 55667789999999999999998777655
Q ss_pred CCC--cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE
Q psy15549 149 DES--TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN 226 (621)
Q Consensus 149 ~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~ 226 (621)
.-. -..+|++.+.... ... -..-.++.|+.....-+.|+......+||+.++.+
T Consensus 1163 s~S~PlsaLW~~~s~~~~--------------------~Hs----f~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~ 1218 (1516)
T KOG1832|consen 1163 SSSSPLSALWDASSTGGP--------------------RHS----FDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSP 1218 (1516)
T ss_pred cccCchHHHhccccccCc--------------------ccc----ccccceeehhhhHHHHHhcccccceEEEecccCcH
Confidence 332 4679998763221 011 12346788887655556666667899999999987
Q ss_pred EEEe-cc---CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 227 LGIL-TE---HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 227 ~~~~-~~---~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
+.++ .+ ....-.+..|+|+...++ .|| .+||++..+.++.+.
T Consensus 1219 l~tylt~~~~~~y~~n~a~FsP~D~LIl---ndG--vLWDvR~~~aIh~FD 1264 (1516)
T KOG1832|consen 1219 LQTYLTDTVTSSYSNNLAHFSPCDTLIL---NDG--VLWDVRIPEAIHRFD 1264 (1516)
T ss_pred HHHhcCcchhhhhhccccccCCCcceEe---eCc--eeeeeccHHHHhhhh
Confidence 7663 21 112235778999988776 677 489999887766654
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.3e-07 Score=92.89 Aligned_cols=187 Identities=16% Similarity=0.265 Sum_probs=132.5
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEcc
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
.+.++|++++ +++|+.|. +|.|.+.+.... . .....|+.. .-+|.++++|+.||+|.|-.+.
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~--------~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~ 101 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQGN--------P-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLF 101 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecCCc--------c-ccccccccc------ccCCceEEEecCCCcEEEeecc
Confidence 3456777766 68999998 778888887653 1 223334333 5589999999999999999998
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-----CCEEEEEeCCCeEEEEECC--CCcEEEEecc
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-----STHLISGSVDNTAIMWDVH--KGKNLGILTE 232 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-----~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~ 232 (621)
+.+.... .....++.+++++|+ .+++++|+..| +.++.-+ ..+....+..
T Consensus 102 ~~~~~~~----------------------~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~ 158 (846)
T KOG2066|consen 102 TDDEITQ----------------------YDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSE 158 (846)
T ss_pred CCcccee----------------------EecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeec
Confidence 8876422 245567999999997 57899999888 7776422 1111123556
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 312 (621)
..++|.++.|. |+++|-++.+| |++||+.+++.+..+......+ .....-..+.|.++.+
T Consensus 159 ~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~-----------------R~e~fpphl~W~~~~~ 218 (846)
T KOG2066|consen 159 GEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSV-----------------RPELFPPHLHWQDEDR 218 (846)
T ss_pred CccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCC-----------------CcccCCCceEecCCCe
Confidence 67899999998 89999998877 7999999998887765443211 1112235688988887
Q ss_pred eEEeccccccCCCCCCcceeee
Q psy15549 313 LLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 313 ~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
.++. +..++++..+.
T Consensus 219 LVIG-------W~d~v~i~~I~ 233 (846)
T KOG2066|consen 219 LVIG-------WGDSVKICSIK 233 (846)
T ss_pred EEEe-------cCCeEEEEEEe
Confidence 6664 56677777665
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.7e-05 Score=80.31 Aligned_cols=310 Identities=11% Similarity=0.057 Sum_probs=159.1
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccc-cCcEE-EEEEccCCCEEEEEcCCceEEEEe
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRH-QKAVN-VVRFSPNGELLASGDDVGKEIWYL 109 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~-~l~~spdg~~las~~d~~v~iw~~ 109 (621)
.+++++.+|.+.-+|..+.+. +|.......... +... ...+. .+.. .+++.++.+.++.+..+|.
T Consensus 71 ~vy~~~~~g~l~ald~~tG~~-----~W~~~~~~~~~~-------~~~~~~~~~~~~~~v-~~~~v~v~~~~g~l~ald~ 137 (394)
T PRK11138 71 KVYAADRAGLVKALDADTGKE-----IWSVDLSEKDGW-------FSKNKSALLSGGVTV-AGGKVYIGSEKGQVYALNA 137 (394)
T ss_pred EEEEECCCCeEEEEECCCCcE-----eeEEcCCCcccc-------cccccccccccccEE-ECCEEEEEcCCCEEEEEEC
Confidence 778888889998777776654 777654331100 0000 00111 0111 1334444344777888888
Q ss_pred ccCccccccceecccccccCCCeEE-EEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeee
Q psy15549 110 TERESGIANVEFASDLSRHQKAVNV-VRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL 188 (621)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~h~~~V~~-i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (621)
.+++ .+....... .+.+ ... .+..++.+..++.|..+|..+++.+-.+..... ....
T Consensus 138 ~tG~-------~~W~~~~~~-~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~------------~~~~ 195 (394)
T PRK11138 138 EDGE-------VAWQTKVAG-EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVP------------SLTL 195 (394)
T ss_pred CCCC-------CcccccCCC-ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCC------------cccc
Confidence 7763 222222111 1111 111 244677778889999999999986533211000 0000
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCc-------ceEEEEEcC--CCCEEEEEeCCCcEE
Q psy15549 189 RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKK-------FVQGVAWDP--KNQYVATLSSDRSLR 259 (621)
Q Consensus 189 ~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-------~v~~l~~sp--~~~~l~s~~~dg~i~ 259 (621)
.+...++ . .+..++.++.+|.+..+|..+|+.+........ ....+..+| .+..++.++.+|.+.
T Consensus 196 ~~~~sP~----v--~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ 269 (394)
T PRK11138 196 RGESAPA----T--AFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLV 269 (394)
T ss_pred cCCCCCE----E--ECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEE
Confidence 0111111 1 123567777889999999999887655421110 011111122 255677788899999
Q ss_pred EEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeee
Q psy15549 260 TYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTR 339 (621)
Q Consensus 260 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~ 339 (621)
.+|..+++.+....... ...+. .++..+++++ .++.+..++.......
T Consensus 270 ald~~tG~~~W~~~~~~-------------------------~~~~~--~~~~~vy~~~-----~~g~l~ald~~tG~~~ 317 (394)
T PRK11138 270 ALDLRSGQIVWKREYGS-------------------------VNDFA--VDGGRIYLVD-----QNDRVYALDTRGGVEL 317 (394)
T ss_pred EEECCCCCEEEeecCCC-------------------------ccCcE--EECCEEEEEc-----CCCeEEEEECCCCcEE
Confidence 99999998765432110 00111 1233344433 3444444433211000
Q ss_pred cccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceE-EE
Q psy15549 340 ACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLT-DI 418 (621)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~-~~ 418 (621)
- .... ... . ...+|.+ .++.+++++.+|.|+..|..+|+.+..... ....+. ..
T Consensus 318 W--~~~~--~~~-~-----~~~sp~v--------------~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~-~~~~~~s~P 372 (394)
T PRK11138 318 W--SQSD--LLH-R-----LLTAPVL--------------YNGYLVVGDSEGYLHWINREDGRFVAQQKV-DSSGFLSEP 372 (394)
T ss_pred E--cccc--cCC-C-----cccCCEE--------------ECCEEEEEeCCCEEEEEECCCCCEEEEEEc-CCCcceeCC
Confidence 0 0000 000 0 0011111 247788899999999999999998877643 222222 22
Q ss_pred EEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 419 TWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 419 ~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
.+ .+..|+.++.||.|+.++.
T Consensus 373 ~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 373 VV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred EE--ECCEEEEEeCCceEEEEeC
Confidence 22 2447888899999988764
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.1e-07 Score=58.70 Aligned_cols=39 Identities=28% Similarity=0.635 Sum_probs=36.7
Q ss_pred CcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy15549 224 GKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYS 262 (621)
Q Consensus 224 ~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd 262 (621)
++++.++.+|...|.+++|+|++.+|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 357889999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.56 E-value=3e-07 Score=58.01 Aligned_cols=39 Identities=38% Similarity=0.719 Sum_probs=36.2
Q ss_pred eeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15549 182 WIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWD 220 (621)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd 220 (621)
|++...+.+|...|++++|+|++.+|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 346688999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.4e-05 Score=73.30 Aligned_cols=263 Identities=14% Similarity=0.094 Sum_probs=140.6
Q ss_pred eecccccccCCCeEEEEECCCCC-EEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEE
Q psy15549 120 EFASDLSRHQKAVNVVRFSPNGE-LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198 (621)
Q Consensus 120 ~~~~~~~~h~~~V~~i~~sp~g~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 198 (621)
.....+.+|...|..++|+|... ++..++.+..|.|.|+++...+. .+..+ ..++++
T Consensus 184 kssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vs---------------------sy~a~-~~~wSC 241 (463)
T KOG1645|consen 184 KSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVS---------------------SYIAY-NQIWSC 241 (463)
T ss_pred chhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeee---------------------heecc-CCceee
Confidence 44456677888999999999665 78899999999999999987653 33445 789999
Q ss_pred EECCCC-CEEEEEeCCCeEEEEECCCCcE-EEEecc--CCcceEEEEE------cCCCCEEEEEeCCCcEEEEEccCcee
Q psy15549 199 SWSPTS-THLISGSVDNTAIMWDVHKGKN-LGILTE--HKKFVQGVAW------DPKNQYVATLSSDRSLRTYSIQSKKV 268 (621)
Q Consensus 199 ~~spd~-~~l~s~~~dg~i~vwd~~~~~~-~~~~~~--~~~~v~~l~~------sp~~~~l~s~~~dg~i~iwd~~~~~~ 268 (621)
+|.-|. ++|..|...|.|.|||++..+- +..+.+ ...+|..++. .+.|.+|+..+.+ +..|++.....
T Consensus 242 ~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~ 319 (463)
T KOG1645|consen 242 CWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAE 319 (463)
T ss_pred eeccCCcceeEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhcccc
Confidence 999865 5677788899999999986532 222211 1233433332 2334444444433 44555432110
Q ss_pred eeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCcee
Q psy15549 269 ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVC 348 (621)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~ 348 (621)
- .+....-...+...++++.+-.+.++......... ..++..-. ........++..
T Consensus 320 ~--------------------~p~vlele~pG~cismqy~~~snh~l~tyRs~pn~-p~~r~il~---~~d~~dG~pVc~ 375 (463)
T KOG1645|consen 320 C--------------------LPCVLELEPPGICISMQYHGVSNHLLLTYRSNPNF-PQSRFILG---RIDFRDGFPVCG 375 (463)
T ss_pred C--------------------CCcccccCCCcceeeeeecCccceEEEEecCCCCC-ccceeeee---eeccccCceeee
Confidence 0 00001112233445666666666666554210000 00000000 000000000000
Q ss_pred -cCCc-ccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE-cCCcEEEEeCCCCceeEEEecccccceEEEEEcC-CC
Q psy15549 349 -LPSL-QYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA-TENNILLYDTQHASPFAFIANIHYTKLTDITWSS-DG 424 (621)
Q Consensus 349 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp-dg 424 (621)
-..+ ......+...+ ......+..+++..+ +.+.+.+||..+.+.+..+. -..+|.+++... +|
T Consensus 376 ~r~~~~Gs~~~kl~t~~----------ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~--~~epv~Dicp~~~n~ 443 (463)
T KOG1645|consen 376 KRRTYFGSKQTKLSTTQ----------AIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQTLA--LSEPVLDICPNDTNG 443 (463)
T ss_pred ecccccCCccccccccc----------ceeccccccEEEEecCCcceeEEeccchhheeeecc--cCcceeecceeecCC
Confidence 0000 00000000000 111112234444333 45789999999999998885 447888887654 33
Q ss_pred -CeEEEEeCCCcEEEEEecC
Q psy15549 425 -KVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 425 -~~l~s~s~dg~i~iw~~~~ 443 (621)
.+|++- .|..++||..++
T Consensus 444 ~syLa~L-Td~~v~Iyk~es 462 (463)
T KOG1645|consen 444 SSYLALL-TDDRVHIYKNES 462 (463)
T ss_pred cchhhhe-ecceEEEEecCC
Confidence 466655 566789887653
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.1e-05 Score=79.21 Aligned_cols=116 Identities=14% Similarity=0.184 Sum_probs=81.9
Q ss_pred CCCeEE-EeccccccCCcceEEEEec----CCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 13 RDPVLS-VDIQLKQEKDNCYRIVTGG----ADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 13 ~~~v~~-l~~spd~~~~~~~~l~tg~----~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
.+.+.. ..|+|..+ ++|+++ ..|.|. |+- ++++.... .+.. -.++++
T Consensus 14 sdavsti~SWHPseP-----lfAVA~fS~er~GSVt--------------Ifa-dtGEPqr~-----Vt~P---~hatSL 65 (1416)
T KOG3617|consen 14 SDAVSTISSWHPSEP-----LFAVASFSPERGGSVT--------------IFA-DTGEPQRD-----VTYP---VHATSL 65 (1416)
T ss_pred ccccccccccCCCCc-----eeEEEEecCCCCceEE--------------EEe-cCCCCCcc-----cccc---eehhhh
Confidence 334433 46888887 888775 367777 653 22321111 0112 235679
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
+|+|..-.|+.|. -+.+.+|..... +.......|..+|..+.||++|..++++..-|.|.+|.......
T Consensus 66 CWHpe~~vLa~gwe~g~~~v~~~~~~-------e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~ 135 (1416)
T KOG3617|consen 66 CWHPEEFVLAQGWEMGVSDVQKTNTT-------ETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGE 135 (1416)
T ss_pred ccChHHHHHhhccccceeEEEecCCc-------eeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeeccc
Confidence 9999998999998 555789988765 44444567999999999999999999999999999998874433
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.48 E-value=0.00012 Score=68.20 Aligned_cols=218 Identities=13% Similarity=0.117 Sum_probs=123.3
Q ss_pred CeEEEEECC-CCCEEEEEeCCC-eEEEEECCCCcEEEEeccCCcc--eEEEEEcCCCCEEEEEeC-----CCcEEEEEcc
Q psy15549 194 DVYDISWSP-TSTHLISGSVDN-TAIMWDVHKGKNLGILTEHKKF--VQGVAWDPKNQYVATLSS-----DRSLRTYSIQ 264 (621)
Q Consensus 194 ~v~~i~~sp-d~~~l~s~~~dg-~i~vwd~~~~~~~~~~~~~~~~--v~~l~~sp~~~~l~s~~~-----dg~i~iwd~~ 264 (621)
....++.+| .+..++.+-.-| ...+||..+++....+....+. --.-+||+||++|++.-. .|.|-|||..
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 345688888 555666666655 5789999999988877543322 124579999999997644 4789999998
Q ss_pred -CceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCC--CCCcceeeeee-----
Q psy15549 265 -SKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSD--STRKPISVTHV----- 336 (621)
Q Consensus 265 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d--~~i~~~~~~~~----- 336 (621)
+.+.+.++..+.. .-..+.+.|||+.|+++.|+....- +..++ ++...
T Consensus 86 ~~~~ri~E~~s~GI-----------------------GPHel~l~pDG~tLvVANGGI~Thpd~GR~kL-Nl~tM~psL~ 141 (305)
T PF07433_consen 86 RGYRRIGEFPSHGI-----------------------GPHELLLMPDGETLVVANGGIETHPDSGRAKL-NLDTMQPSLV 141 (305)
T ss_pred CCcEEEeEecCCCc-----------------------ChhhEEEcCCCCEEEEEcCCCccCcccCceec-ChhhcCCceE
Confidence 5555555543321 1256899999999998887655331 11111 11110
Q ss_pred eeecccCCCce--ec--CCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE-cCC-------cEEEEeCCCCcee
Q psy15549 337 FTRACLNKPAV--CL--PSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA-TEN-------NILLYDTQHASPF 404 (621)
Q Consensus 337 ~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg-------~i~iwd~~~~~~~ 404 (621)
+.......... .+ ..++..+..+...+ + +.++.+. ..| -|.+++.. ..+
T Consensus 142 ~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~----------------~-G~V~~a~Q~qg~~~~~~PLva~~~~g--~~~ 202 (305)
T PF07433_consen 142 YLDARSGALLEQVELPPDLHQLSIRHLAVDG----------------D-GTVAFAMQYQGDPGDAPPLVALHRRG--GAL 202 (305)
T ss_pred EEecCCCceeeeeecCccccccceeeEEecC----------------C-CcEEEEEecCCCCCccCCeEEEEcCC--Ccc
Confidence 00000000000 01 11222222222221 1 2222222 222 12222222 212
Q ss_pred EEEe------cccccceEEEEEcCCCCeEEEEe-CCCcEEEEEecCCcCCcccCCCC
Q psy15549 405 AFIA------NIHYTKLTDITWSSDGKVLIASS-TDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 405 ~~~~------~~h~~~v~~~~~spdg~~l~s~s-~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
..+. ..-...+-+|+++++|.++++.| .-|.+.+||..+++++.....+.
T Consensus 203 ~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~D 259 (305)
T PF07433_consen 203 RLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLPD 259 (305)
T ss_pred eeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccCc
Confidence 2111 11235789999999999876555 77899999999999988776654
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.1e-06 Score=84.56 Aligned_cols=183 Identities=15% Similarity=0.213 Sum_probs=126.5
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
.+.++|++++.. +|+-|..+|.|+ +.+...... +...|+.. .-+
T Consensus 39 ~D~is~~av~~~-------~~~~GtH~g~v~--------------~~~~~~~~~---------~~~~~s~~------~~~ 82 (846)
T KOG2066|consen 39 NDAISCCAVHDK-------FFALGTHRGAVY--------------LTTCQGNPK---------TNFDHSSS------ILE 82 (846)
T ss_pred hhHHHHHHhhcc-------eeeeccccceEE--------------EEecCCccc---------cccccccc------ccC
Confidence 457888888843 999999999999 666553321 12334333 568
Q ss_pred CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-----CCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 93 GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-----GELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 93 g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-----g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
|.++++|+ ||.|.|-.+.+.. ....+ ....++.+++++|+ .+.+++|+..| +.++.-.=.....
T Consensus 83 Gey~asCS~DGkv~I~sl~~~~-------~~~~~-df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~- 152 (846)
T KOG2066|consen 83 GEYVASCSDDGKVVIGSLFTDD-------EITQY-DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKD- 152 (846)
T ss_pred CceEEEecCCCcEEEeeccCCc-------cceeE-ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCcc-
Confidence 99999999 7779888887663 22222 23457899999997 46899999988 7776432111110
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcce------EEE
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFV------QGV 240 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v------~~l 240 (621)
...+....++|.++.|. |+++|-++.+| |+|||+.+++.+..+......+ ..+
T Consensus 153 ------------------~v~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl 211 (846)
T KOG2066|consen 153 ------------------SVVLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHL 211 (846)
T ss_pred ------------------ceeeecCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCce
Confidence 12356678899999996 67888888776 8999999998887775433322 357
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcc
Q psy15549 241 AWDPKNQYVATLSSDRSLRTYSIQ 264 (621)
Q Consensus 241 ~~sp~~~~l~s~~~dg~i~iwd~~ 264 (621)
.|.++.+.++ |...+|+|..++
T Consensus 212 ~W~~~~~LVI--GW~d~v~i~~I~ 233 (846)
T KOG2066|consen 212 HWQDEDRLVI--GWGDSVKICSIK 233 (846)
T ss_pred EecCCCeEEE--ecCCeEEEEEEe
Confidence 7776654433 566689999887
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.3e-05 Score=73.39 Aligned_cols=111 Identities=14% Similarity=0.124 Sum_probs=74.0
Q ss_pred CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q psy15549 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMW 219 (621)
Q Consensus 140 ~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vw 219 (621)
++..+++++.++.|..||..+++.+..+ .+....... . ..++..+++++.++.|+.+
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~-------------------~~~~~~~~~--~--~~~~~~v~v~~~~~~l~~~ 91 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRF-------------------DLPGPISGA--P--VVDGGRVYVGTSDGSLYAL 91 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEE-------------------ECSSCGGSG--E--EEETTEEEEEETTSEEEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEe-------------------eccccccce--e--eecccccccccceeeeEec
Confidence 5667888889999999999998754221 111111111 1 1234567777788899999
Q ss_pred ECCCCcEEEEe-ccCC---cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 220 DVHKGKNLGIL-TEHK---KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 220 d~~~~~~~~~~-~~~~---~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
|..+|+.+... .... ...........+..++.+..++.|..+|+.+|+.+....
T Consensus 92 d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~ 149 (238)
T PF13360_consen 92 DAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYP 149 (238)
T ss_dssp ETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEE
T ss_pred ccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEee
Confidence 99999998874 3221 111222233338888888889999999999999877664
|
... |
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.44 E-value=1e-06 Score=80.55 Aligned_cols=100 Identities=12% Similarity=0.168 Sum_probs=81.2
Q ss_pred EEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC
Q psy15549 145 ASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG 224 (621)
Q Consensus 145 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~ 224 (621)
++.+.+..|-+-++.++.. +.+ ...+.|.++.|...+++++.|+..|.|..+|++.+
T Consensus 228 fs~G~sqqv~L~nvetg~~----------------------qsf-~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~r 284 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ----------------------QSF-QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCR 284 (425)
T ss_pred ecccccceeEEEEeecccc----------------------ccc-ccchhHHHHHhcccCCeeEecccCCcEEEEEeeec
Confidence 5556677788999988863 222 36788999999998999999999999999999865
Q ss_pred -----cEEEEeccCCcceEEEEEcC-CCCEEEEEeCCCcEEEEEccCcee
Q psy15549 225 -----KNLGILTEHKKFVQGVAWDP-KNQYVATLSSDRSLRTYSIQSKKV 268 (621)
Q Consensus 225 -----~~~~~~~~~~~~v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~~~~ 268 (621)
.+...+ -|...|+++..-. ++++|++.+.+|.|++||++.-++
T Consensus 285 nqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~ 333 (425)
T KOG2695|consen 285 NQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKC 333 (425)
T ss_pred ccCCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhc
Confidence 344444 4888899988776 688999999999999999987655
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.1e-06 Score=83.16 Aligned_cols=239 Identities=12% Similarity=0.111 Sum_probs=150.1
Q ss_pred cCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEE
Q psy15549 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL 207 (621)
Q Consensus 128 h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l 207 (621)
|...|+.+.-+ -.+++.+++.||.++.|.-..-.-+ +....+..|...|.+++.+-++.++
T Consensus 8 hrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGv------------------EfVKhFraHL~~I~sl~~S~dg~L~ 68 (558)
T KOG0882|consen 8 HRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGV------------------EFVKHFRAHLGVILSLAVSYDGWLF 68 (558)
T ss_pred ccceeeeEeee-hhheEEeeecchhhhhcCCCCccce------------------eehhhhHHHHHHHHhhhccccceeE
Confidence 66777766544 4679999999999999975431211 1235567788899999999999999
Q ss_pred EEEeC-CCeEEEEECCCCcEEEEeccC--CcceEEEEEcCCC--CEEEE-EeCCCcEEEEEccCceeeeecccCCCCCCC
Q psy15549 208 ISGSV-DNTAIMWDVHKGKNLGILTEH--KKFVQGVAWDPKN--QYVAT-LSSDRSLRTYSIQSKKVISRACRSKLPVDS 281 (621)
Q Consensus 208 ~s~~~-dg~i~vwd~~~~~~~~~~~~~--~~~v~~l~~sp~~--~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 281 (621)
.+.+. |..++++|+++...+..++.. .+.+ ++..++.. ..|++ .-.++.+.++|-....+..
T Consensus 69 ~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a-~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~----------- 136 (558)
T KOG0882|consen 69 RSVEDPDHSVKVFDVENFDMINMIKLVDLPGFA-EWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQD----------- 136 (558)
T ss_pred eeccCcccceeEEEeeccchhhhcccccCCCce-EEecCCCCeeeeEEeecccCCCcEEECCcCCcCcc-----------
Confidence 99777 999999999876655433321 1222 11222321 12333 3357889999875543211
Q ss_pred ccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeec
Q psy15549 282 SHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKC 361 (621)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (621)
.+...-|-.+|..+.+.+-+..+++.. ..|.+.-|.....+... -
T Consensus 137 ----------~~fkklH~sPV~~i~y~qa~Ds~vSiD-----~~gmVEyWs~e~~~qfP---------------r----- 181 (558)
T KOG0882|consen 137 ----------GYFKKLHFSPVKKIRYNQAGDSAVSID-----ISGMVEYWSAEGPFQFP---------------R----- 181 (558)
T ss_pred ----------ceecccccCceEEEEeeccccceeecc-----ccceeEeecCCCcccCc---------------c-----
Confidence 112334456677888888877777655 45566666543211000 0
Q ss_pred cceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 362 CPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
.-.-|.+....-+..+.. .....+++.|+|+|..+.+-+.|..|+++.+
T Consensus 182 ------------------------------~~l~~~~K~eTdLy~f~K-~Kt~pts~Efsp~g~qistl~~DrkVR~F~~ 230 (558)
T KOG0882|consen 182 ------------------------------TNLNFELKHETDLYGFPK-AKTEPTSFEFSPDGAQISTLNPDRKVRGFVF 230 (558)
T ss_pred ------------------------------ccccccccccchhhcccc-cccCccceEEccccCcccccCcccEEEEEEe
Confidence 001122222222222222 3456789999999999999999999999999
Q ss_pred cCCcCCcccCCCCCcccccCCC
Q psy15549 442 GDNEIGIPYVPPSGEESKENDP 463 (621)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~ 463 (621)
.+|++.+.+...........-+
T Consensus 231 KtGklvqeiDE~~t~~~~q~ks 252 (558)
T KOG0882|consen 231 KTGKLVQEIDEVLTDAQYQPKS 252 (558)
T ss_pred ccchhhhhhhccchhhhhcccc
Confidence 9999999887654444333333
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.41 E-value=0.00021 Score=71.02 Aligned_cols=173 Identities=15% Similarity=0.178 Sum_probs=91.3
Q ss_pred eEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecc---ccccc------
Q psy15549 58 IWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFAS---DLSRH------ 128 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~---~~~~h------ 128 (621)
|+|+.++.... +......+....|||+|+.+|...++.+.+++...+... .+..-- .+.|-
T Consensus 27 i~d~~~~~~~~--------l~~~~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~~~~--~lT~dg~~~i~nG~~dwvye 96 (353)
T PF00930_consen 27 IYDIETGEITP--------LTPPPPKLQDAKWSPDGKYIAFVRDNNLYLRDLATGQET--QLTTDGEPGIYNGVPDWVYE 96 (353)
T ss_dssp EEETTTTEEEE--------SS-EETTBSEEEE-SSSTEEEEEETTEEEEESSTTSEEE--ESES--TTTEEESB--HHHH
T ss_pred EEecCCCceEE--------CcCCccccccceeecCCCeeEEEecCceEEEECCCCCeE--EeccccceeEEcCccceecc
Confidence 77877754322 222256788999999999999999999988877655210 000000 00000
Q ss_pred ---CCCeEEEEECCCCCEEEEEeC-CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC
Q psy15549 129 ---QKAVNVVRFSPNGELLASGDD-ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS 204 (621)
Q Consensus 129 ---~~~V~~i~~sp~g~~l~s~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~ 204 (621)
-+.-..+.||||+++||.... +..|..+.+....... .....+..+.+-.-|
T Consensus 97 EEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~------------------------~~yp~~~~~~YPk~G 152 (353)
T PF00930_consen 97 EEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPD------------------------SQYPEVESIRYPKAG 152 (353)
T ss_dssp HHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSST------------------------ESS-EEEEEE--BTT
T ss_pred ccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCcc------------------------ccCCcccccccCCCC
Confidence 112346889999999988654 3445554432221100 001124444442222
Q ss_pred CEEEEEeCCCeEEEEECCCCcEEE--Ee---ccCCcceEEEEEcCCCCEEEE--EeCCC---cEEEEEccCcee
Q psy15549 205 THLISGSVDNTAIMWDVHKGKNLG--IL---TEHKKFVQGVAWDPKNQYVAT--LSSDR---SLRTYSIQSKKV 268 (621)
Q Consensus 205 ~~l~s~~~dg~i~vwd~~~~~~~~--~~---~~~~~~v~~l~~sp~~~~l~s--~~~dg---~i~iwd~~~~~~ 268 (621)
.--.. -.+.|+|+.+++... .. ......+..+.|.++++.|+. ...+. .+.++|..++..
T Consensus 153 ~~np~----v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~ 222 (353)
T PF00930_consen 153 DPNPR----VSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGET 222 (353)
T ss_dssp S---E----EEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTC
T ss_pred CcCCc----eEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCce
Confidence 21111 246778888776532 11 234567889999999984443 33332 466677766544
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.39 E-value=0.00014 Score=68.00 Aligned_cols=152 Identities=12% Similarity=0.042 Sum_probs=84.3
Q ss_pred cCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 91 PNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 91 pdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
.++.+++...++.+..|+..++ +.+..... ...+.... ...+..+++++.++.|..+|..+++.+..+
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG-------~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~--- 102 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTG-------KVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSI--- 102 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTS-------EEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEE---
T ss_pred eCCEEEEEcCCCEEEEEECCCC-------CEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeee---
Confidence 3344444445888888888776 22222221 11111111 124556677778889999999998864210
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcc----------eEEE
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF----------VQGV 240 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~----------v~~l 240 (621)
......... .........++..++++..++.|..+|+.+|+.+......... +..-
T Consensus 103 -------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~ 168 (238)
T PF13360_consen 103 -------------YLTSSPPAG-VRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGS 168 (238)
T ss_dssp -------------EE-SSCTCS-TB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEE
T ss_pred -------------ccccccccc-cccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccc
Confidence 011101111 1122222223778888888999999999999998777553322 1122
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCceee
Q psy15549 241 AWDPKNQYVATLSSDRSLRTYSIQSKKVI 269 (621)
Q Consensus 241 ~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 269 (621)
....++ .++.++.++.+..+|+.+++.+
T Consensus 169 ~~~~~~-~v~~~~~~g~~~~~d~~tg~~~ 196 (238)
T PF13360_consen 169 PVISDG-RVYVSSGDGRVVAVDLATGEKL 196 (238)
T ss_dssp EECCTT-EEEEECCTSSEEEEETTTTEEE
T ss_pred eEEECC-EEEEEcCCCeEEEEECCCCCEE
Confidence 222234 6666777775333488888744
|
... |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=6.1e-05 Score=76.29 Aligned_cols=237 Identities=9% Similarity=0.028 Sum_probs=128.7
Q ss_pred CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEE-EEECCCCCEEEEEeCCCeEEE
Q psy15549 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYD-ISWSPTSTHLISGSVDNTAIM 218 (621)
Q Consensus 140 ~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-i~~spd~~~l~s~~~dg~i~v 218 (621)
.+..++.++.+|.+..+|..+++.+-... +. ..+.+ ... .+..++.++.++.+..
T Consensus 119 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~-------------------~~---~~~~ssP~v--~~~~v~v~~~~g~l~a 174 (394)
T PRK11138 119 AGGKVYIGSEKGQVYALNAEDGEVAWQTK-------------------VA---GEALSRPVV--SDGLVLVHTSNGMLQA 174 (394)
T ss_pred ECCEEEEEcCCCEEEEEECCCCCCccccc-------------------CC---CceecCCEE--ECCEEEEECCCCEEEE
Confidence 35567788889999999999998764331 11 11111 111 2346777888999999
Q ss_pred EECCCCcEEEEeccCCcce-----EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccccccc
Q psy15549 219 WDVHKGKNLGILTEHKKFV-----QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLF 293 (621)
Q Consensus 219 wd~~~~~~~~~~~~~~~~v-----~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (621)
+|..+|+.+.........+ .+.... +..++.++.+|.+..+|..+++.+......... ......
T Consensus 175 ld~~tG~~~W~~~~~~~~~~~~~~~sP~v~--~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~---~~~~~~------ 243 (394)
T PRK11138 175 LNESDGAVKWTVNLDVPSLTLRGESAPATA--FGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPT---GATEID------ 243 (394)
T ss_pred EEccCCCEeeeecCCCCcccccCCCCCEEE--CCEEEEEcCCCEEEEEEccCChhhheeccccCC---Cccchh------
Confidence 9999999887765321111 111111 345667888999999999998876544211100 000000
Q ss_pred ccCCcccceeeeeecC--CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCC
Q psy15549 294 HDDTMKSFFRRLTFSP--DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPS 371 (621)
Q Consensus 294 ~~~~~~~~i~~~~~sp--dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (621)
....+.-+| .+..+++++ .++.+..++....... +... +.... .+
T Consensus 244 -------~~~~~~~sP~v~~~~vy~~~-----~~g~l~ald~~tG~~~--W~~~---~~~~~--------~~-------- 290 (394)
T PRK11138 244 -------RLVDVDTTPVVVGGVVYALA-----YNGNLVALDLRSGQIV--WKRE---YGSVN--------DF-------- 290 (394)
T ss_pred -------cccccCCCcEEECCEEEEEE-----cCCeEEEEECCCCCEE--Eeec---CCCcc--------Cc--------
Confidence 000001111 123344333 3444433333211000 0000 00000 00
Q ss_pred CCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccC
Q psy15549 372 DDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYV 451 (621)
Q Consensus 372 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~ 451 (621)
...++.+++++.+|.++.+|..+++.+-...........+... .+.+|+.++.||.|.++|..+|+++....
T Consensus 291 ------~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~ 362 (394)
T PRK11138 291 ------AVDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQK 362 (394)
T ss_pred ------EEECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence 1135678888899999999999997655432111111222222 24578888999999999999998776654
Q ss_pred C
Q psy15549 452 P 452 (621)
Q Consensus 452 ~ 452 (621)
.
T Consensus 363 ~ 363 (394)
T PRK11138 363 V 363 (394)
T ss_pred c
Confidence 3
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.1e-05 Score=83.21 Aligned_cols=148 Identities=13% Similarity=0.121 Sum_probs=111.4
Q ss_pred cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC---------CCc
Q psy15549 83 AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD---------EST 152 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~---------dg~ 152 (621)
.|.-++ .+++++.+|. .|.|.+-|.... +.++.+..|++.|..+.. .|+.|++||. |..
T Consensus 179 ~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~-------~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~F 247 (1118)
T KOG1275|consen 179 GVTIMR--YNNRNLFCGDTRGTVFLRDPNSF-------ETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPF 247 (1118)
T ss_pred ceEEEE--ecCcEEEeecccceEEeecCCcC-------ceeeeeeccccceeeeec--cCCeEEEeecccccccccccch
Confidence 344444 4678888888 888999998876 788999999999987655 6889999874 567
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEE---CCCC-cEE
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWD---VHKG-KNL 227 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd---~~~~-~~~ 227 (621)
|+|||++..+.+..++ -+. ...-+.|+|.- ..+++++..|...+-| +.+. ..+
T Consensus 248 vkVYDLRmmral~PI~---------------------~~~-~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~ 305 (1118)
T KOG1275|consen 248 VKVYDLRMMRALSPIQ---------------------FPY-GPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGV 305 (1118)
T ss_pred hhhhhhhhhhccCCcc---------------------ccc-CchhhhhcccccceEEEEecccceeeccccccCCCccce
Confidence 8999999988765441 111 12456777743 5788888899999998 3332 223
Q ss_pred EEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15549 228 GILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSI 263 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~ 263 (621)
..+......+.++.++++++.++.|..+|.|.+|.-
T Consensus 306 ~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 306 KMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD 341 (1118)
T ss_pred eEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence 344445566999999999999999999999999973
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.35 E-value=0.00016 Score=74.53 Aligned_cols=165 Identities=15% Similarity=0.189 Sum_probs=104.4
Q ss_pred cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCC-CEEEEEeCCC-----cEEE
Q psy15549 83 AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDES-----TIIV 155 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg-----~i~v 155 (621)
.|.| |++.+..++.|+ +|.|.+.+-.- ...+.+..+...|...-|.-++ .+|++.+.|+ .|+|
T Consensus 27 ~isc--~~s~~~~vvigt~~G~V~~Ln~s~--------~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llki 96 (933)
T KOG2114|consen 27 AISC--CSSSTGSVVIGTADGRVVILNSSF--------QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKI 96 (933)
T ss_pred ceeE--EcCCCceEEEeeccccEEEecccc--------eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEE
Confidence 4544 678888899888 77776665432 4456777777774344444444 6888877665 4899
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC----CCcEEEEec
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH----KGKNLGILT 231 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~----~~~~~~~~~ 231 (621)
|+++....... | . .................++.+++.+.+-+.+|+|-.+|.|..+.=. .+....-..
T Consensus 97 w~lek~~~n~s-P--~-----c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~ 168 (933)
T KOG2114|consen 97 WDLEKVDKNNS-P--Q-----CLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSH 168 (933)
T ss_pred ecccccCCCCC-c--c-----eeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeec
Confidence 99876542210 0 0 0000000000112245678899999998999999999999988421 122222222
Q ss_pred cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q psy15549 232 EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~ 265 (621)
....+|+.+++..++..++.+..-..|.+|.+..
T Consensus 169 ~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~g 202 (933)
T KOG2114|consen 169 RGKEPITGLALRSDGKSVLFVATTEQVMLYSLSG 202 (933)
T ss_pred cCCCCceeeEEecCCceeEEEEecceeEEEEecC
Confidence 3467899999999988745555566799999874
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.34 E-value=0.0001 Score=75.96 Aligned_cols=208 Identities=11% Similarity=0.129 Sum_probs=132.2
Q ss_pred eccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCc-EEEEEEccCCCEEEE
Q psy15549 20 DIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA-VNVVRFSPNGELLAS 98 (621)
Q Consensus 20 ~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~-V~~l~~spdg~~las 98 (621)
+|++.+. .+|.|+.+|.|. +.+-. +.....+..+... |..+-...+..+|++
T Consensus 30 c~~s~~~-----~vvigt~~G~V~--------------~Ln~s--------~~~~~~fqa~~~siv~~L~~~~~~~~L~s 82 (933)
T KOG2114|consen 30 CCSSSTG-----SVVIGTADGRVV--------------ILNSS--------FQLIRGFQAYEQSIVQFLYILNKQNFLFS 82 (933)
T ss_pred EEcCCCc-----eEEEeeccccEE--------------Eeccc--------ceeeehheecchhhhhHhhcccCceEEEE
Confidence 3566666 999999999876 44321 1223346666666 444433334467777
Q ss_pred Ec-CC-----ceEEEEeccCcccc-ccceecccccc-----cCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 99 GD-DV-----GKEIWYLTERESGI-ANVEFASDLSR-----HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 99 ~~-d~-----~v~iw~~~~~~~~~-~~~~~~~~~~~-----h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
.+ |. .++||++....... +.....+.+.. ...++.+++.+.+-+.+|+|-.+|.|..+.-+--+....
T Consensus 83 v~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgs 162 (933)
T KOG2114|consen 83 VGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGS 162 (933)
T ss_pred EeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhcccc
Confidence 55 33 37999998764332 22221112222 356788999999999999999999999885332211100
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-EEEeccCCcceEEEEEcCC
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN-LGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~l~~sp~ 245 (621)
-.........+|+.+++..++..++.......|.+|.+....+ ...+..|...+.|..|++.
T Consensus 163 -----------------r~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~ 225 (933)
T KOG2114|consen 163 -----------------RQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDG 225 (933)
T ss_pred -----------------ceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCC
Confidence 0122334567899999999887744444456799999974442 4456778888999999886
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeec
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
...|++++ +..+.+|+....+.-..+
T Consensus 226 t~qfIca~-~e~l~fY~sd~~~~cfaf 251 (933)
T KOG2114|consen 226 TYQFICAG-SEFLYFYDSDGRGPCFAF 251 (933)
T ss_pred CccEEEec-CceEEEEcCCCcceeeee
Confidence 66566554 456899998765554444
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.00019 Score=77.03 Aligned_cols=245 Identities=11% Similarity=0.168 Sum_probs=138.1
Q ss_pred cCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEE
Q psy15549 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL 207 (621)
Q Consensus 128 h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l 207 (621)
..+.|.++.|..+...++.+..+|.|.+-|..+... .....-...|.+++|+||+..+
T Consensus 67 gd~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~----------------------eivg~vd~GI~aaswS~Dee~l 124 (1265)
T KOG1920|consen 67 GDDEIVSVQFLADTNSICVITALGDIILVDPETLEL----------------------EIVGNVDNGISAASWSPDEELL 124 (1265)
T ss_pred CCcceEEEEEecccceEEEEecCCcEEEEcccccce----------------------eeeeeccCceEEEeecCCCcEE
Confidence 446899999999999999999999999998777652 2233456789999999999999
Q ss_pred EEEeCCCeEEEEECCCCcEEEEeccC-----CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCc
Q psy15549 208 ISGSVDNTAIMWDVHKGKNLGILTEH-----KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSS 282 (621)
Q Consensus 208 ~s~~~dg~i~vwd~~~~~~~~~~~~~-----~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 282 (621)
+..+..+++.+-. .+..++..-..+ .+..-.+-|-.....|= +..|.....+......
T Consensus 125 ~liT~~~tll~mT-~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfr--gs~gr~~~~~~~~~ek-------------- 187 (1265)
T KOG1920|consen 125 ALITGRQTLLFMT-KDFEPIAEKPLDADDERKSKFVNVGWGRKETQFR--GSEGRQAARQKIEKEK-------------- 187 (1265)
T ss_pred EEEeCCcEEEEEe-ccccchhccccccccccccccceecccccceeee--cchhhhcccccccccc--------------
Confidence 9999888776654 233333222111 11112233322111111 1111111111100000
Q ss_pred cccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeecc
Q psy15549 283 HELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCC 362 (621)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (621)
..... .....=+++.|-.||.++|+..-........+++|+....... .-....+...++.|.
T Consensus 188 ------~~~~~---~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drEg~Lns--------~se~~~~l~~~LsWk 250 (1265)
T KOG1920|consen 188 ------ALEQI---EQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDREGALNS--------TSEPVEGLQHSLSWK 250 (1265)
T ss_pred ------cccch---hhccCCceEEEccCCcEEEEEEEeccCCceeEEEecccchhhc--------ccCcccccccceeec
Confidence 00000 0111126799999999999855333323377888876521110 111112223344555
Q ss_pred ceeeecCCCCCCCCccCCCcEEEEEE---cCCcEEEEeCCCC---ceeEEEecccccceEEEEEcCCCCeEEE---EeCC
Q psy15549 363 PVLFELKPSDDKPLFKLPYRIVIAVA---TENNILLYDTQHA---SPFAFIANIHYTKLTDITWSSDGKVLIA---SSTD 433 (621)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~---~~~~~~~~~h~~~v~~~~~spdg~~l~s---~s~d 433 (621)
| .|..+++.. +++.|.+|....- ......+ .....|..++|+.++..||+ ....
T Consensus 251 P----------------sgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p-~de~~ve~L~Wns~sdiLAv~~~~~e~ 313 (1265)
T KOG1920|consen 251 P----------------SGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFP-LDEKEVEELAWNSNSDILAVVTSNLEN 313 (1265)
T ss_pred C----------------CCCeEeeeeecCCCCcEEEEecCCccccccccCCc-ccccchheeeecCCCCceeeeeccccc
Confidence 4 556666665 4567888875432 2111111 12334999999999999987 4444
Q ss_pred CcEEEEEecCCc
Q psy15549 434 GYCSIISFGDNE 445 (621)
Q Consensus 434 g~i~iw~~~~~~ 445 (621)
..|++|.+.+-.
T Consensus 314 ~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 314 SLVQLWTTGNYH 325 (1265)
T ss_pred ceEEEEEecCeE
Confidence 559999988653
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.00055 Score=68.94 Aligned_cols=147 Identities=19% Similarity=0.163 Sum_probs=85.7
Q ss_pred cccccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVW 156 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vw 156 (621)
+.........+.++|+|++++.++++...|+..... .. ...+.-..++|.+.+ .+|+-...++|.|+
T Consensus 28 lg~~~~~p~~ls~npngr~v~V~g~geY~iyt~~~~-------r~-----k~~G~g~~~vw~~~n-~yAv~~~~~~I~I~ 94 (443)
T PF04053_consen 28 LGSCEIYPQSLSHNPNGRFVLVCGDGEYEIYTALAW-------RN-----KAFGSGLSFVWSSRN-RYAVLESSSTIKIY 94 (443)
T ss_dssp EEE-SS--SEEEE-TTSSEEEEEETTEEEEEETTTT-------EE-----EEEEE-SEEEE-TSS-EEEEE-TTS-EEEE
T ss_pred CCCCCcCCeeEEECCCCCEEEEEcCCEEEEEEccCC-------cc-----cccCceeEEEEecCc-cEEEEECCCeEEEE
Confidence 334445678999999999999999999888883321 11 112345568899855 56777778889996
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcc
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF 236 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 236 (621)
.--.......+ . ....+..|-. |.+|+..+.+ .|.+||+.+++.+..+... +
T Consensus 95 kn~~~~~~k~i---------------------~-~~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~ 146 (443)
T PF04053_consen 95 KNFKNEVVKSI---------------------K-LPFSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVS--A 146 (443)
T ss_dssp ETTEE-TT---------------------------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS---E
T ss_pred EcCccccceEE---------------------c-CCcccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecC--C
Confidence 32222221111 1 1112333433 7777777644 8999999999999998633 4
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~ 265 (621)
|..+.|+++|.+++..+.+ .+.|++...
T Consensus 147 vk~V~Ws~~g~~val~t~~-~i~il~~~~ 174 (443)
T PF04053_consen 147 VKYVIWSDDGELVALVTKD-SIYILKYNL 174 (443)
T ss_dssp -EEEEE-TTSSEEEEE-S--SEEEEEE-H
T ss_pred CcEEEEECCCCEEEEEeCC-eEEEEEecc
Confidence 8999999999999988755 677776543
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.25 E-value=0.00094 Score=71.90 Aligned_cols=220 Identities=13% Similarity=0.186 Sum_probs=127.2
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc-
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ- 158 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~- 158 (621)
.+.|.++.|.-++..+..+. .|.|.+-+..+.. ......-...|.+++|+||+..++..+..+++.+-.-
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~--------~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~ 139 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLE--------LEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKD 139 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEcccccc--------eeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEecc
Confidence 36899999999887766665 7778777666542 2222234568999999999999999988887776542
Q ss_pred ---cCCCCCCCCCCCCcccccccccceee-eeeecC---------------------CCCCeEEEEECCCCCEEEEEeC-
Q psy15549 159 ---KTDQDLPEFPSSNLDEENVNKEHWIV-TKILRG---------------------HLEDVYDISWSPTSTHLISGSV- 212 (621)
Q Consensus 159 ---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------------------~~~~v~~i~~spd~~~l~s~~~- 212 (621)
-..+.+ ..... .......-.|.- ...+.+ -...=+.|.|--||+++|+...
T Consensus 140 f~~i~E~~L--~~d~~-~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~ 216 (1265)
T KOG1920|consen 140 FEPIAEKPL--DADDE-RKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVE 216 (1265)
T ss_pred ccchhcccc--ccccc-cccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEe
Confidence 111111 00000 000000000100 001111 1112246899999999998432
Q ss_pred ---C-CeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEe---CCCcEEEEEccCceeeeecccCCCCCCCcccc
Q psy15549 213 ---D-NTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLS---SDRSLRTYSIQSKKVISRACRSKLPVDSSHEL 285 (621)
Q Consensus 213 ---d-g~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 285 (621)
+ ..|+|||-+ |..-..-....+.=.+++|-|.|..+++.. +|+.|.+|.-...+ -..+... .
T Consensus 217 ~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~-hg~f~l~-~-------- 285 (1265)
T KOG1920|consen 217 SETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLR-HGEFVLP-F-------- 285 (1265)
T ss_pred ccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCcc-ccccccC-C--------
Confidence 3 789999975 543333233334446799999999988754 35678888754322 1111100 0
Q ss_pred ccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeee
Q psy15549 286 FDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 286 ~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
......+..++|+.++..|++..... ....+++|...
T Consensus 286 ----------p~de~~ve~L~Wns~sdiLAv~~~~~--e~~~v~lwt~~ 322 (1265)
T KOG1920|consen 286 ----------PLDEKEVEELAWNSNSDILAVVTSNL--ENSLVQLWTTG 322 (1265)
T ss_pred ----------cccccchheeeecCCCCceeeeeccc--ccceEEEEEec
Confidence 00111268999999999998843211 33447777654
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.4e-05 Score=72.37 Aligned_cols=222 Identities=10% Similarity=0.003 Sum_probs=125.2
Q ss_pred ccccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccccc
Q psy15549 2 KCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ 81 (621)
Q Consensus 2 ~~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~ 81 (621)
.++..++...|..-|..|+|||..+ -+|..++.+..|. |.|+.+.-... .+..|
T Consensus 182 ~fkssq~lp~~g~~IrdlafSp~~~----GLl~~asl~nkik--------------i~dlet~~~vs-------sy~a~- 235 (463)
T KOG1645|consen 182 DFKSSQILPGEGSFIRDLAFSPFNE----GLLGLASLGNKIK--------------IMDLETSCVVS-------SYIAY- 235 (463)
T ss_pred CcchhhcccccchhhhhhccCcccc----ceeeeeccCceEE--------------EEecccceeee-------heecc-
Confidence 4455567788888999999999886 3688899999999 77776554322 35556
Q ss_pred CcEEEEEEccCCCE-EEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEE------CCCCCEEEEEeCCCcE
Q psy15549 82 KAVNVVRFSPNGEL-LASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRF------SPNGELLASGDDESTI 153 (621)
Q Consensus 82 ~~V~~l~~spdg~~-las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~------sp~g~~l~s~s~dg~i 153 (621)
..+.+++|.-|... |.+|. .|.|.|||+...+.....+.- .+ ...+|..++. .+.|.+|+..+.+ +
T Consensus 236 ~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a--~~--t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l 309 (463)
T KOG1645|consen 236 NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELVA--NV--TINPVHKIAPVQPNKIFTSGGLLVFALTV--L 309 (463)
T ss_pred CCceeeeeccCCcceeEEeccCceEEEEEccCCCchHhhhhh--hh--ccCcceeecccCccccccccceEEeeehh--h
Confidence 78999999987654 44555 778999999887543221111 01 1223444433 2345555555543 5
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC-------eEE-EEECCCCc
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN-------TAI-MWDVHKGK 225 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg-------~i~-vwd~~~~~ 225 (621)
..|++........ . ....+..+.+.++.+.+-.++++...... .+- --|-.+|.
T Consensus 310 ~f~ei~~s~~~~p-----------------~-vlele~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~ 371 (463)
T KOG1645|consen 310 QFYEIVFSAECLP-----------------C-VLELEPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGF 371 (463)
T ss_pred hhhhhhccccCCC-----------------c-ccccCCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCc
Confidence 6676543322110 0 11123345566777777555555443320 011 11222333
Q ss_pred EEEEec-cCCc-c------eEEEEEcCCCCEEE-EEeCCCcEEEEEccCceeeeecc
Q psy15549 226 NLGILT-EHKK-F------VQGVAWDPKNQYVA-TLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 226 ~~~~~~-~~~~-~------v~~l~~sp~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
.+..-+ .+.+ . -..+.-.++.++++ ++...+.+.+||..+.+.++.+.
T Consensus 372 pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~ 428 (463)
T KOG1645|consen 372 PVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQTLA 428 (463)
T ss_pred eeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEeccchhheeeecc
Confidence 332211 1100 0 01122234556655 44456789999999999888774
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=4e-05 Score=78.47 Aligned_cols=110 Identities=14% Similarity=0.281 Sum_probs=87.9
Q ss_pred EEEEECCCCCEEEEEe----CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE
Q psy15549 133 NVVRFSPNGELLASGD----DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 133 ~~i~~sp~g~~l~s~s----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~ 208 (621)
+-..|+|...+||+++ ..|+|.|| .+++++-... .-.-.+++++|+|..-.|+
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIf-adtGEPqr~V----------------------t~P~hatSLCWHpe~~vLa 75 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIF-ADTGEPQRDV----------------------TYPVHATSLCWHPEEFVLA 75 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEE-ecCCCCCccc----------------------ccceehhhhccChHHHHHh
Confidence 4467999988888876 46789888 3555542211 1122356799999988899
Q ss_pred EEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q psy15549 209 SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 209 s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~ 265 (621)
.|-.-|.+.+|...+.+.......|..+|..+.||++|..|+++..-|.|.+|....
T Consensus 76 ~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~ 132 (1416)
T KOG3617|consen 76 QGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDV 132 (1416)
T ss_pred hccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeee
Confidence 999999999999887777666678999999999999999999999999999998764
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00047 Score=68.76 Aligned_cols=78 Identities=21% Similarity=0.356 Sum_probs=65.5
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCcee
Q psy15549 189 RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV 268 (621)
Q Consensus 189 ~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 268 (621)
....+.|.|++++|+...|+.|+.||.|.+||...+... +....-.++.++|+|+|..+++|+..|.+.+||+.-...
T Consensus 256 ipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi 333 (545)
T PF11768_consen 256 IPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPI 333 (545)
T ss_pred EecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCcc
Confidence 367788999999999999999999999999998766433 223445578899999999999999999999999865443
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.17 E-value=6.5e-05 Score=75.26 Aligned_cols=192 Identities=16% Similarity=0.216 Sum_probs=114.7
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEec---CC-ceEEeeeccCccccccceeEEeccccccccceeeccccccccCc
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGG---AD-SHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA 83 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~---~d-g~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~ 83 (621)
.+..-...+..-+|+|+++ .++.-. .. ..+. ++++..+..... ..+ .+.
T Consensus 187 ~l~~~~~~~~~p~ws~~~~-----~~~y~~f~~~~~~~i~--------------~~~l~~g~~~~i-----~~~---~g~ 239 (425)
T COG0823 187 KLTDSGSLILTPAWSPDGK-----KLAYVSFELGGCPRIY--------------YLDLNTGKRPVI-----LNF---NGN 239 (425)
T ss_pred EecccCcceeccccCcCCC-----ceEEEEEecCCCceEE--------------EEeccCCcccee-----ecc---CCc
Confidence 3344455677778899887 544432 12 3344 788877765432 112 333
Q ss_pred EEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CC--cEEEEEc
Q psy15549 84 VNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-ES--TIIVWKQ 158 (621)
Q Consensus 84 V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg--~i~vwd~ 158 (621)
-...+|+|||+.|+.+. ++...||-+...... ...+....+.-..-.|+|||++|+..+. .| .|.+++.
T Consensus 240 ~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~------~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~ 313 (425)
T COG0823 240 NGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN------LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDL 313 (425)
T ss_pred cCCccCCCCCCEEEEEECCCCCccEEEEcCCCCc------ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECC
Confidence 44567999999998876 655555554443321 2223333333346789999998887654 44 4556666
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-Ce--EEEEECCCCcEEEEeccCCc
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD-NT--AIMWDVHKGKNLGILTEHKK 235 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d-g~--i~vwd~~~~~~~~~~~~~~~ 235 (621)
+.... ..+......-..-.|+|||++|+..+.. |. |.+.|+.++...+.+. +..
T Consensus 314 ~g~~~----------------------~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt-~~~ 370 (425)
T COG0823 314 EGSQV----------------------TRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT-STY 370 (425)
T ss_pred CCCce----------------------eEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc-ccc
Confidence 65543 1222222222378899999999887753 44 6777776666544442 344
Q ss_pred ceEEEEEcCCCCEEEEEeCC
Q psy15549 236 FVQGVAWDPKNQYVATLSSD 255 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~d 255 (621)
......|.|++..++..+..
T Consensus 371 ~~e~ps~~~ng~~i~~~s~~ 390 (425)
T COG0823 371 LNESPSWAPNGRMIMFSSGQ 390 (425)
T ss_pred cCCCCCcCCCCceEEEeccC
Confidence 45566788898887755543
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00063 Score=69.61 Aligned_cols=74 Identities=18% Similarity=0.154 Sum_probs=56.7
Q ss_pred CCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcE------------EEEeccCCcceEEEEEcCCCCEEEEEeCCCc
Q psy15549 191 HLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKN------------LGILTEHKKFVQGVAWDPKNQYVATLSSDRS 257 (621)
Q Consensus 191 ~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~------------~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~ 257 (621)
-......+.++|||+++++++. +.+|.|+|+.+.+. +.......++ ...+|.++|+...+..-|..
T Consensus 319 VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGP-LHTaFDg~G~aytslf~dsq 397 (635)
T PRK02888 319 VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGP-LHTAFDGRGNAYTTLFLDSQ 397 (635)
T ss_pred CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCc-ceEEECCCCCEEEeEeecce
Confidence 3455678999999998887665 89999999987553 3333333333 46789999998888888999
Q ss_pred EEEEEccC
Q psy15549 258 LRTYSIQS 265 (621)
Q Consensus 258 i~iwd~~~ 265 (621)
|..|++..
T Consensus 398 v~kwn~~~ 405 (635)
T PRK02888 398 IVKWNIEA 405 (635)
T ss_pred eEEEehHH
Confidence 99999876
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00017 Score=72.38 Aligned_cols=185 Identities=17% Similarity=0.221 Sum_probs=114.4
Q ss_pred ccCcEEEEEEccCCCEEEEEc---CC--ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCc-
Q psy15549 80 HQKAVNVVRFSPNGELLASGD---DV--GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DEST- 152 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~---d~--~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~- 152 (621)
-...+..-+|+|++..++... .+ .+.++++..+.. ..+..+.++. ...+|+|||+.|+.+. .||.
T Consensus 191 ~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~-----~~i~~~~g~~---~~P~fspDG~~l~f~~~rdg~~ 262 (425)
T COG0823 191 SGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKR-----PVILNFNGNN---GAPAFSPDGSKLAFSSSRDGSP 262 (425)
T ss_pred cCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCcc-----ceeeccCCcc---CCccCCCCCCEEEEEECCCCCc
Confidence 345677788999999887654 22 377788877643 2333344443 3578999999777654 5665
Q ss_pred -EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CC--eEEEEECCCCcEEE
Q psy15549 153 -IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DN--TAIMWDVHKGKNLG 228 (621)
Q Consensus 153 -i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg--~i~vwd~~~~~~~~ 228 (621)
|.++|+.+.... .+....+.-..-.|+|||+.++..+. .| .|.+++++.+.. .
T Consensus 263 ~iy~~dl~~~~~~----------------------~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~ 319 (425)
T COG0823 263 DIYLMDLDGKNLP----------------------RLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-T 319 (425)
T ss_pred cEEEEcCCCCcce----------------------ecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-e
Confidence 555566666521 12222333336789999998887665 34 466777766554 3
Q ss_pred EeccCCcceEEEEEcCCCCEEEEEeCC-Cc--EEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeee
Q psy15549 229 ILTEHKKFVQGVAWDPKNQYVATLSSD-RS--LRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL 305 (621)
Q Consensus 229 ~~~~~~~~v~~l~~sp~~~~l~s~~~d-g~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 305 (621)
.+......-....|+|||++|+..+.. |. |.+.|+.++...+.+.. .......
T Consensus 320 riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~------------------------~~~~e~p 375 (425)
T COG0823 320 RLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTS------------------------TYLNESP 375 (425)
T ss_pred EeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccc------------------------cccCCCC
Confidence 333333322377899999999877753 44 66666655543333221 1122456
Q ss_pred eecCCCCeEEeccc
Q psy15549 306 TFSPDGQLLIAPSG 319 (621)
Q Consensus 306 ~~spdg~~l~~~s~ 319 (621)
.|.++|+.++..++
T Consensus 376 s~~~ng~~i~~~s~ 389 (425)
T COG0823 376 SWAPNGRMIMFSSG 389 (425)
T ss_pred CcCCCCceEEEecc
Confidence 88999998887763
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.0009 Score=67.83 Aligned_cols=163 Identities=15% Similarity=0.152 Sum_probs=104.1
Q ss_pred ccCcEEEEEEccCCCEEEEEcCCc-eEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy15549 80 HQKAVNVVRFSPNGELLASGDDVG-KEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~d~~-v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~ 158 (621)
|...|.--+++..+++++.|++.+ +.+|+-..+. -......+..+.+..+..+++..++|.|+..|.|.++-+
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~------~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql 105 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGE------MRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQL 105 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchh------hhcccccCccceEEEEEecchhHhhhhhcCCceEEeehh
Confidence 445666677888999999998555 5555554432 112222234556677788888889999999999999988
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC----cEEEEeccCC
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG----KNLGILTEHK 234 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~ 234 (621)
.......... +...-..|...|+|++|++++..+++|...|.|.+-.+.+. -..+.+....
T Consensus 106 ~~~~p~~~~~---------------~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~d 170 (726)
T KOG3621|consen 106 NKELPRDLDY---------------VTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSED 170 (726)
T ss_pred hccCCCccee---------------eccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccC
Confidence 7744321110 01112248899999999999999999999999999888762 1122333345
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEccCc
Q psy15549 235 KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSK 266 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~ 266 (621)
+.|..+.+. ..+|++++.-.. .+++...+
T Consensus 171 s~IVQlD~~--q~~LLVStl~r~-~Lc~tE~e 199 (726)
T KOG3621|consen 171 SEIVQLDYL--QSYLLVSTLTRC-ILCQTEAE 199 (726)
T ss_pred cceEEeecc--cceehHhhhhhh-heeecchh
Confidence 667666654 334443333332 34444433
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00077 Score=66.98 Aligned_cols=262 Identities=14% Similarity=0.112 Sum_probs=138.3
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCcccc--------------------ccceeEEecccccc--cccee
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRL--------------------KTGKIWYLTERESG--IANVE 72 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~--------------------~~~~iw~~~~~~~~--~~~~~ 72 (621)
.|++|.|+++.. -|++|...|.|.+|-+...+.. ....|-|+...... +..+.
T Consensus 3 ~v~~vs~a~~t~-----Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~ 77 (395)
T PF08596_consen 3 SVTHVSFAPETL-----ELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFL 77 (395)
T ss_dssp -EEEEEEETTTT-----EEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEE
T ss_pred eEEEEEecCCCc-----eEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccC
Confidence 488999999987 9999999999998877543222 13446666553322 23344
Q ss_pred eccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceeccc--c-cccCCCeEEEEECC-----CC--
Q psy15549 73 FASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASD--L-SRHQKAVNVVRFSP-----NG-- 141 (621)
Q Consensus 73 ~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~--~-~~h~~~V~~i~~sp-----~g-- 141 (621)
+...+....+.|++++.| |=-++|.|. ++.+.|.|++...--.. ..+.. + ......|+++.|+- |+
T Consensus 78 P~~l~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~--~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~yS 154 (395)
T PF08596_consen 78 PLTLLDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYN--ENIRESFLSKSSSSYVTSIEFSVMTLGGDGYS 154 (395)
T ss_dssp EEEEE---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEE--EEGGG--T-SS----EEEEEEEEEE-TTSSSE
T ss_pred chhheeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEee--ccccccccccccccCeeEEEEEEEecCCCccc
Confidence 555566678999999997 555888888 77899999966521000 11111 1 12345688888863 23
Q ss_pred -CEEEEEeCCCcEEEEEccC-CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEE-ECCC---------------
Q psy15549 142 -ELLASGDDESTIIVWKQKT-DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDIS-WSPT--------------- 203 (621)
Q Consensus 142 -~~l~s~s~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~-~spd--------------- 203 (621)
-+|++|...|.+.+|.+.- ...... -........+.+.|..+. |+.+
T Consensus 155 Si~L~vGTn~G~v~~fkIlp~~~g~f~---------------v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l 219 (395)
T PF08596_consen 155 SICLLVGTNSGNVLTFKILPSSNGRFS---------------VQFAGATTNHDSPILSIIPINADTGESALATISAMQGL 219 (395)
T ss_dssp EEEEEEEETTSEEEEEEEEE-GGG-EE---------------EEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGG
T ss_pred ceEEEEEeCCCCEEEEEEecCCCCceE---------------EEEeeccccCCCceEEEEEEECCCCCcccCchhHhhcc
Confidence 3788899999999998752 111000 001111124555555544 2211
Q ss_pred --C---CEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEc-----CCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 204 --S---THLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD-----PKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 204 --~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~s-----p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
+ ..++....+..++++...+.+..+...........+++- ..+..|++-..+|.|++|.+...+.+..+.
T Consensus 220 ~~g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~ 299 (395)
T PF08596_consen 220 SKGISIPGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVS 299 (395)
T ss_dssp GGT----EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE
T ss_pred ccCCCcCcEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhccc
Confidence 1 123334446789999998887766554332333344452 346678888999999999999988777664
Q ss_pred cCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 274 RSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
.... .....+....++++|..++..+
T Consensus 300 l~~~-------------------~d~~~~~~ssis~~Gdi~~~~g 325 (395)
T PF08596_consen 300 LPPP-------------------LDSRRLSSSSISRNGDIFYWTG 325 (395)
T ss_dssp -SS----------------------HHHHTT-EE-TTS-EEEE-S
T ss_pred CCCc-------------------cccccccccEECCCCCEEEEeC
Confidence 3211 0111235678899999777655
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.0073 Score=60.56 Aligned_cols=65 Identities=20% Similarity=0.293 Sum_probs=53.8
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCC
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIG 447 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~ 447 (621)
+...++.|+.||.|.+||...+...... ..-.++.++|+|+|..+++|+.-|.+.+||+.-+.+.
T Consensus 270 ~E~kLvlGC~DgSiiLyD~~~~~t~~~k---a~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi~ 334 (545)
T PF11768_consen 270 SEDKLVLGCEDGSIILYDTTRGVTLLAK---AEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPIK 334 (545)
T ss_pred ccceEEEEecCCeEEEEEcCCCeeeeee---ecccceEEEEcCCCcEEEEEcCCceEEEEEeecCccc
Confidence 7789999999999999998877433321 3456889999999999999999999999999855443
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.6e-06 Score=85.79 Aligned_cols=205 Identities=18% Similarity=0.246 Sum_probs=132.3
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc-
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP- 91 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp- 91 (621)
...+.|++.+-+.. ...+++|..+|.|. +-.+....... .....+|....++++|++
T Consensus 56 tqy~kcva~~y~~d---~cIlavG~atG~I~--------------l~s~r~~hdSs-----~E~tp~~ar~Ct~lAwneL 113 (783)
T KOG1008|consen 56 TQYVKCVASFYGND---RCILAVGSATGNIS--------------LLSVRHPHDSS-----AEVTPGYARPCTSLAWNEL 113 (783)
T ss_pred CCCceeehhhcCCc---hhhhhhccccCceE--------------EeecCCccccc-----ceecccccccccccccccc
Confidence 34577777654432 24899999999998 66555433220 113567888999999998
Q ss_pred CCCEEEEEc-----CCceEEEEeccCccccccceeccccc-ccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 92 NGELLASGD-----DVGKEIWYLTERESGIANVEFASDLS-RHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 92 dg~~las~~-----d~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
|...||+|- |..+.|||+...-..+.. ...+. +......+++|..+.+++.+|.....+.++|++.....
T Consensus 114 Dtn~LAagldkhrnds~~~Iwdi~s~ltvPke---~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~- 189 (783)
T KOG1008|consen 114 DTNHLAAGLDKHRNDSSLKIWDINSLLTVPKE---SPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDS- 189 (783)
T ss_pred cHHHHHhhhhhhcccCCccceecccccCCCcc---ccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhh-
Confidence 677888874 455899999876321111 11111 23345668899988889999998889999998843211
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEE-CCCCc-EEEEeccC----CcceE
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWD-VHKGK-NLGILTEH----KKFVQ 238 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd-~~~~~-~~~~~~~~----~~~v~ 238 (621)
...-....+..+...| .++++++-. ||.|-+|| ..+-+ ++..+... ...+.
T Consensus 190 ---------------------~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~ 247 (783)
T KOG1008|consen 190 ---------------------VSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLF 247 (783)
T ss_pred ---------------------hhhhhhhhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCccccee
Confidence 1112233466677888 677777665 99999999 33322 22222211 22488
Q ss_pred EEEEcCCC-CEEEEEeCC-CcEEEEEccC
Q psy15549 239 GVAWDPKN-QYVATLSSD-RSLRTYSIQS 265 (621)
Q Consensus 239 ~l~~sp~~-~~l~s~~~d-g~i~iwd~~~ 265 (621)
.++|.|.. ..+++...| ++|+.||+..
T Consensus 248 ~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 248 ALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred eEEeccCCcchhhhhccCcceEEEecccc
Confidence 99999954 335555554 7899999864
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.0055 Score=58.06 Aligned_cols=272 Identities=15% Similarity=0.131 Sum_probs=139.1
Q ss_pred EEEEEccCCCEEEEEc-----------CCceEEEEeccCccccccceecc-cccccCCCeEEEEECCCCCEEEEEe--CC
Q psy15549 85 NVVRFSPNGELLASGD-----------DVGKEIWYLTERESGIANVEFAS-DLSRHQKAVNVVRFSPNGELLASGD--DE 150 (621)
Q Consensus 85 ~~l~~spdg~~las~~-----------d~~v~iw~~~~~~~~~~~~~~~~-~~~~h~~~V~~i~~sp~g~~l~s~s--~d 150 (621)
-.+..||||+.+++++ .+-|.+||..+......-.-+.. ... .......++++.+|++++... =.
T Consensus 39 ~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~-~~~~~~~~~ls~dgk~~~V~N~TPa 117 (342)
T PF06433_consen 39 GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQ-VVPYKNMFALSADGKFLYVQNFTPA 117 (342)
T ss_dssp EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B---BS--GGGEEE-TTSSEEEEEEESSS
T ss_pred CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhe-ecccccceEEccCCcEEEEEccCCC
Confidence 3466899999988652 22378999887632100000000 000 001223467889999887753 34
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC-CCcEEEE
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH-KGKNLGI 229 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~-~~~~~~~ 229 (621)
.+|.|.|+..++.+..+ . - ..+..+--+++ .-+.+-|.||.+.-..+. .|+....
T Consensus 118 ~SVtVVDl~~~kvv~ei---------------------~-~-PGC~~iyP~~~-~~F~~lC~DGsl~~v~Ld~~Gk~~~~ 173 (342)
T PF06433_consen 118 TSVTVVDLAAKKVVGEI---------------------D-T-PGCWLIYPSGN-RGFSMLCGDGSLLTVTLDADGKEAQK 173 (342)
T ss_dssp EEEEEEETTTTEEEEEE---------------------E-G-TSEEEEEEEET-TEEEEEETTSCEEEEEETSTSSEEEE
T ss_pred CeEEEEECCCCceeeee---------------------c-C-CCEEEEEecCC-CceEEEecCCceEEEEECCCCCEeEe
Confidence 57889999888754222 1 1 11222221222 357778889999888887 4555422
Q ss_pred e----ccCCc-ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceee
Q psy15549 230 L----TEHKK-FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304 (621)
Q Consensus 230 ~----~~~~~-~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 304 (621)
. ..... .+..-++...+..++..+..|.|+-.|+........-.. .+..... ..
T Consensus 174 ~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~----------------~~~t~~e-----~~ 232 (342)
T PF06433_consen 174 STKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPW----------------SLLTDAE-----KA 232 (342)
T ss_dssp EEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEE----------------ESS-HHH-----HH
T ss_pred eccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcc----------------cccCccc-----cc
Confidence 1 11122 222344555566677788999998888866542211100 0000000 01
Q ss_pred eeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEE
Q psy15549 305 LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIV 384 (621)
Q Consensus 305 ~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 384 (621)
-.|-|-|-.+++.. ...-++|-+.+ ... .-.|+.
T Consensus 233 ~~WrPGG~Q~~A~~------~~~~rlyvLMh--~g~--------~gsHKd------------------------------ 266 (342)
T PF06433_consen 233 DGWRPGGWQLIAYH------AASGRLYVLMH--QGG--------EGSHKD------------------------------ 266 (342)
T ss_dssp TTEEE-SSS-EEEE------TTTTEEEEEEE--E----------TT-TTS------------------------------
T ss_pred cCcCCcceeeeeec------cccCeEEEEec--CCC--------CCCccC------------------------------
Confidence 13444443333221 00001110000 000 000000
Q ss_pred EEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEE-eCCCcEEEEEecCCcCCcccCCCC
Q psy15549 385 IAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIAS-STDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 385 ~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~-s~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
....|.+||+.+++.+.++... .++.+|+.+.|.+ +|++. ..++.+.+||..+|++++.+..-.
T Consensus 267 ----pgteVWv~D~~t~krv~Ri~l~--~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG 332 (342)
T PF06433_consen 267 ----PGTEVWVYDLKTHKRVARIPLE--HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQLG 332 (342)
T ss_dssp -----EEEEEEEETTTTEEEEEEEEE--EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---S
T ss_pred ----CceEEEEEECCCCeEEEEEeCC--CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhccC
Confidence 0126889999999999998643 4688999999877 56554 457999999999999888876543
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00079 Score=66.93 Aligned_cols=102 Identities=23% Similarity=0.377 Sum_probs=65.7
Q ss_pred CCCCCEEEEEe---------CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE
Q psy15549 138 SPNGELLASGD---------DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 138 sp~g~~l~s~s---------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~ 208 (621)
|||+++++... ..+.+.|||+.+++. ..+......+....|||+|+.++
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~----------------------~~l~~~~~~~~~~~~sP~g~~~~ 58 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEI----------------------TPLTPPPPKLQDAKWSPDGKYIA 58 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEE----------------------EESS-EETTBSEEEE-SSSTEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCce----------------------EECcCCccccccceeecCCCeeE
Confidence 57787776632 345788999998753 22222356788999999999999
Q ss_pred EEeCCCeEEEEECCCCcEEEEeccC-----------------CcceEEEEEcCCCCEEEEEeCC-CcEEEEE
Q psy15549 209 SGSVDNTAIMWDVHKGKNLGILTEH-----------------KKFVQGVAWDPKNQYVATLSSD-RSLRTYS 262 (621)
Q Consensus 209 s~~~dg~i~vwd~~~~~~~~~~~~~-----------------~~~v~~l~~sp~~~~l~s~~~d-g~i~iwd 262 (621)
... ++.|.++++.++...+..... -+.-..+.||||+++|+....| ..|+.+.
T Consensus 59 ~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~ 129 (353)
T PF00930_consen 59 FVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYP 129 (353)
T ss_dssp EEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEE
T ss_pred EEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEE
Confidence 886 678999998777544322111 1123568899999999977654 3444443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0043 Score=57.17 Aligned_cols=209 Identities=14% Similarity=0.202 Sum_probs=105.5
Q ss_pred cccccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceeccc--ccccCCCeEEEEECCCCCEEEEEeCCCcEE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASD--LSRHQKAVNVVRFSPNGELLASGDDESTII 154 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~--~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~ 154 (621)
+.+-...+..++|.|+...|++..|..-.|+.+...+ ..++. +.+ .+..-.|++..++.++++.-.++.+.
T Consensus 17 l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G------~vlr~i~l~g-~~D~EgI~y~g~~~~vl~~Er~~~L~ 89 (248)
T PF06977_consen 17 LPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLDG------KVLRRIPLDG-FGDYEGITYLGNGRYVLSEERDQRLY 89 (248)
T ss_dssp -TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT--------EEEEEE-SS--SSEEEEEE-STTEEEEEETTTTEEE
T ss_pred CCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCCC------CEEEEEeCCC-CCCceeEEEECCCEEEEEEcCCCcEE
Confidence 5555667999999998877777665544455554432 22222 222 35677899988887777766789999
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC---CcEEEEe-
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK---GKNLGIL- 230 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~---~~~~~~~- 230 (621)
++++.......... ...... ......+...+-.++|.|.++.|+.+-+..-..+|.+.. ...+...
T Consensus 90 ~~~~~~~~~~~~~~---------~~~~~~-l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~ 159 (248)
T PF06977_consen 90 IFTIDDDTTSLDRA---------DVQKIS-LGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSD 159 (248)
T ss_dssp EEEE----TT--EE---------EEEEEE----S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE
T ss_pred EEEEeccccccchh---------hceEEe-cccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeecc
Confidence 99985543211100 000000 011123556799999999888888887776667776653 2221111
Q ss_pred -------ccCCcceEEEEEcCCCCEEE-EEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccce
Q psy15549 231 -------TEHKKFVQGVAWDPKNQYVA-TLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFF 302 (621)
Q Consensus 231 -------~~~~~~v~~l~~sp~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 302 (621)
......+.+++++|....|+ .......|.++| .+|+.+..+....... .....-...
T Consensus 160 ~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~--------------gl~~~~~Qp 224 (248)
T PF06977_consen 160 DQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFH--------------GLSKDIPQP 224 (248)
T ss_dssp -HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGG--------------G-SS---SE
T ss_pred ccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCccc--------------CcccccCCc
Confidence 12334578999999765544 455567788888 5677666554222100 000001123
Q ss_pred eeeeecCCCCeEEec
Q psy15549 303 RRLTFSPDGQLLIAP 317 (621)
Q Consensus 303 ~~~~~spdg~~l~~~ 317 (621)
-.++|.++|+..++.
T Consensus 225 EGIa~d~~G~LYIvs 239 (248)
T PF06977_consen 225 EGIAFDPDGNLYIVS 239 (248)
T ss_dssp EEEEE-TT--EEEEE
T ss_pred cEEEECCCCCEEEEc
Confidence 689999999766654
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.0069 Score=63.03 Aligned_cols=75 Identities=11% Similarity=0.148 Sum_probs=49.3
Q ss_pred EEECCCCCEEEEEeCCC------------------eEEEEECCCCcEEEEeccCCcce------EEEEEc----CCCC--
Q psy15549 198 ISWSPTSTHLISGSVDN------------------TAIMWDVHKGKNLGILTEHKKFV------QGVAWD----PKNQ-- 247 (621)
Q Consensus 198 i~~spd~~~l~s~~~dg------------------~i~vwd~~~~~~~~~~~~~~~~v------~~l~~s----p~~~-- 247 (621)
.++.+.+..++.++.++ .|.-+|+.+|+.+..+..-.... ....+. -++.
T Consensus 222 pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~ 301 (488)
T cd00216 222 PTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPV 301 (488)
T ss_pred eeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCee
Confidence 45555566777776554 79999999999987764211111 011111 1333
Q ss_pred -EEEEEeCCCcEEEEEccCceeeeec
Q psy15549 248 -YVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 248 -~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
.++.++.+|.+..+|..+|+.+...
T Consensus 302 ~~V~~g~~~G~l~ald~~tG~~~W~~ 327 (488)
T cd00216 302 PAIVHAPKNGFFYVLDRTTGKLISAR 327 (488)
T ss_pred EEEEEECCCceEEEEECCCCcEeeEe
Confidence 5777888999999999999987665
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.025 Score=57.18 Aligned_cols=173 Identities=12% Similarity=0.073 Sum_probs=89.7
Q ss_pred CcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 82 KAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
+.|.++.|+.+..+++...++.++++++.... ............-....+.+..+..+|-.+++ .++.+.+..-...
T Consensus 81 ~~iv~~~wt~~e~LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~~~GivvLt--~~~~~~~v~n~~~ 157 (410)
T PF04841_consen 81 GRIVGMGWTDDEELVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFYKNGIVVLT--GNNRFYVVNNIDE 157 (410)
T ss_pred CCEEEEEECCCCeEEEEEcCCEEEEEeCCCce-eechhhhccccCcccccccccccCCCCEEEEC--CCCeEEEEeCccc
Confidence 79999999999888888889999999986432 00000111111112222333344445633333 3444444322211
Q ss_pred C-CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEE
Q psy15549 162 Q-DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240 (621)
Q Consensus 162 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 240 (621)
. ....++.. +. .......+........++.+....+....++.+.+.+-...+. + ...+++..+
T Consensus 158 ~~~~~~~~~~-p~----------~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i-~~~~~i~~i 222 (410)
T PF04841_consen 158 PVKLRRLPEI-PG----------LWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---I-DSDGPIIKI 222 (410)
T ss_pred cchhhccccC-CC----------cccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---c-cCCCCeEEE
Confidence 1 11111000 00 0000011111111133445555555555566666554332211 2 234679999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCceeeeec
Q psy15549 241 AWDPKNQYVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 241 ~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
++||+++++|.-..+|.+.+....-.+.+..+
T Consensus 223 avSpng~~iAl~t~~g~l~v~ssDf~~~~~e~ 254 (410)
T PF04841_consen 223 AVSPNGKFIALFTDSGNLWVVSSDFSEKLCEF 254 (410)
T ss_pred EECCCCCEEEEEECCCCEEEEECcccceeEEe
Confidence 99999999999999999988876555544444
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.0021 Score=63.89 Aligned_cols=133 Identities=17% Similarity=0.214 Sum_probs=82.7
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC-CCCCCCcc------------c---------ccccccceeeeeee
Q psy15549 131 AVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP-EFPSSNLD------------E---------ENVNKEHWIVTKIL 188 (621)
Q Consensus 131 ~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~-~~~~~~~~------------~---------~~~~~~~~~~~~~~ 188 (621)
.|+.+.|+++..-|++|...|.|.||.....+... .-.....+ . ...-...+.+...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 58899999998899999999999999876654432 11000000 0 00011234455566
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe--cc------CCcceEEEEEcC-----CC---CEEEEE
Q psy15549 189 RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL--TE------HKKFVQGVAWDP-----KN---QYVATL 252 (621)
Q Consensus 189 ~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~--~~------~~~~v~~l~~sp-----~~---~~l~s~ 252 (621)
....+.|++++.| |=.+++.|..+|.+.|.|++....+..- .. ....|+++.|.. |+ -.|++|
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG 161 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG 161 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence 6678999999998 5559999999999999999877766552 22 234678888862 22 457788
Q ss_pred eCCCcEEEEEcc
Q psy15549 253 SSDRSLRTYSIQ 264 (621)
Q Consensus 253 ~~dg~i~iwd~~ 264 (621)
...|.+.+|.+.
T Consensus 162 Tn~G~v~~fkIl 173 (395)
T PF08596_consen 162 TNSGNVLTFKIL 173 (395)
T ss_dssp ETTSEEEEEEEE
T ss_pred eCCCCEEEEEEe
Confidence 889999999774
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.0073 Score=57.26 Aligned_cols=163 Identities=11% Similarity=0.096 Sum_probs=90.8
Q ss_pred EEEEEccCCCEEEEEc---CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 85 NVVRFSPNGELLASGD---DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 85 ~~l~~spdg~~las~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
..+++|.||++++... ...|.|.|+... +.+..+. -.++....-+ ..+-|.+-+.||.+.-..++..
T Consensus 98 ~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~-------kvv~ei~-~PGC~~iyP~--~~~~F~~lC~DGsl~~v~Ld~~ 167 (342)
T PF06433_consen 98 NMFALSADGKFLYVQNFTPATSVTVVDLAAK-------KVVGEID-TPGCWLIYPS--GNRGFSMLCGDGSLLTVTLDAD 167 (342)
T ss_dssp GGEEE-TTSSEEEEEEESSSEEEEEEETTTT-------EEEEEEE-GTSEEEEEEE--ETTEEEEEETTSCEEEEEETST
T ss_pred cceEEccCCcEEEEEccCCCCeEEEEECCCC-------ceeeeec-CCCEEEEEec--CCCceEEEecCCceEEEEECCC
Confidence 4467899999988764 667889998876 4443332 1222221112 2245778888999999988855
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCe-EEEEECCCCCEEEEEeCCCeEEEEECCCCcEE--EEeccC-----
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDV-YDISWSPTSTHLISGSVDNTAIMWDVHKGKNL--GILTEH----- 233 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~--~~~~~~----- 233 (621)
.....- ....+.....++ ..-++...+..++.-+..|.|+--|+...... ..+...
T Consensus 168 Gk~~~~----------------~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~ 231 (342)
T PF06433_consen 168 GKEAQK----------------STKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEK 231 (342)
T ss_dssp SSEEEE----------------EEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHH
T ss_pred CCEeEe----------------eccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCcccc
Confidence 432100 011222222222 23344555556666788999998888654421 111110
Q ss_pred -----CcceEEEEEcCCCCEEEEEeCC---C-------cEEEEEccCceeeeecc
Q psy15549 234 -----KKFVQGVAWDPKNQYVATLSSD---R-------SLRTYSIQSKKVISRAC 273 (621)
Q Consensus 234 -----~~~v~~l~~sp~~~~l~s~~~d---g-------~i~iwd~~~~~~~~~~~ 273 (621)
.+.-.-+++++..+.|++.-.. + .|-+||+.+++.+.++.
T Consensus 232 ~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~ 286 (342)
T PF06433_consen 232 ADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIP 286 (342)
T ss_dssp HTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEE
T ss_pred ccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEe
Confidence 1223457888766666544221 1 47788888888888774
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0062 Score=56.12 Aligned_cols=212 Identities=13% Similarity=0.178 Sum_probs=109.7
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
.+.+..|+|+|+.. .++++....+.|. ..+.. ++.... ..+.+ .+..-.|++..+
T Consensus 21 ~~e~SGLTy~pd~~----tLfaV~d~~~~i~--------------els~~-G~vlr~-----i~l~g-~~D~EgI~y~g~ 75 (248)
T PF06977_consen 21 LDELSGLTYNPDTG----TLFAVQDEPGEIY--------------ELSLD-GKVLRR-----IPLDG-FGDYEGITYLGN 75 (248)
T ss_dssp -S-EEEEEEETTTT----EEEEEETTTTEEE--------------EEETT---EEEE-----EE-SS--SSEEEEEE-ST
T ss_pred cCCccccEEcCCCC----eEEEEECCCCEEE--------------EEcCC-CCEEEE-----EeCCC-CCCceeEEEECC
Confidence 33599999999865 3777777777776 44432 221111 11333 356778888888
Q ss_pred CCEEEEEc-CCceEEEEeccCcccc--ccceecc-cc-cccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 93 GELLASGD-DVGKEIWYLTERESGI--ANVEFAS-DL-SRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 93 g~~las~~-d~~v~iw~~~~~~~~~--~~~~~~~-~~-~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
+.++++.. ++.+.++.+....... ..+.... .+ ..+...+-.++|.|.++.|+.+-+..-..+|.+........+
T Consensus 76 ~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~ 155 (248)
T PF06977_consen 76 GRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDL 155 (248)
T ss_dssp TEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--
T ss_pred CEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccce
Confidence 87777765 7778888885432211 1111111 11 235567899999998887777777777777777652200000
Q ss_pred CCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEeccCC---------cce
Q psy15549 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHKGKNLGILTEHK---------KFV 237 (621)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~---------~~v 237 (621)
.......+ .........+.+++++|. +.+++.+..+..|.++| .+|+.+..+.-.. ...
T Consensus 156 -------~~~~~~~~---~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~Qp 224 (248)
T PF06977_consen 156 -------FVSDDQDL---DDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQP 224 (248)
T ss_dssp -------EEEE-HHH---H-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SE
T ss_pred -------eecccccc---ccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCc
Confidence 00000000 001234456889999995 45666777788999999 5787766553222 246
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEE
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTY 261 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iw 261 (621)
..|+|.++|+..+ .++-+...+|
T Consensus 225 EGIa~d~~G~LYI-vsEpNlfy~f 247 (248)
T PF06977_consen 225 EGIAFDPDGNLYI-VSEPNLFYRF 247 (248)
T ss_dssp EEEEE-TT--EEE-EETTTEEEEE
T ss_pred cEEEECCCCCEEE-EcCCceEEEe
Confidence 7899999996554 5566655544
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.022 Score=57.20 Aligned_cols=255 Identities=17% Similarity=0.157 Sum_probs=158.7
Q ss_pred cEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCC-EEEEEeCCCcEEEEEcc
Q psy15549 83 AVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE-LLASGDDESTIIVWKQK 159 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~-~l~s~s~dg~i~vwd~~ 159 (621)
....+...+++..+.... .+.+...+.... ............-..++.++.+. .+++...+..|.+.|..
T Consensus 32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n-------~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~ 104 (381)
T COG3391 32 GPGGVAVNPDGTQVYVANSGSNDVSVIDATSN-------TVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTA 104 (381)
T ss_pred CCceeEEcCccCEEEEEeecCceeeecccccc-------eeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCc
Confidence 456677888886555544 222333332211 11111111113345678888887 44455556899999976
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC---CCeEEEEECCCCcEEEEeccCCcc
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV---DNTAIMWDVHKGKNLGILTEHKKF 236 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~---dg~i~vwd~~~~~~~~~~~~~~~~ 236 (621)
+....... ..+. ....++++|+++.+..+.. ++.+.+.|..+.+.+........+
T Consensus 105 ~~~~~~~~--------------------~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P 162 (381)
T COG3391 105 TNTVLGSI--------------------PVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP 162 (381)
T ss_pred ccceeeEe--------------------eecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc
Confidence 66543221 1122 5678999999988777665 689999999888888775443344
Q ss_pred eEEEEEcCCCCEEEEEe-CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 237 VQGVAWDPKNQYVATLS-SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
..++++|+|..++.+. .++.|.+.|........ ......+ .....-..+.++|+|.+++
T Consensus 163 -~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~--~~~~~~~-----------------~~~~~P~~i~v~~~g~~~y 222 (381)
T COG3391 163 -TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR--GSVGSLV-----------------GVGTGPAGIAVDPDGNRVY 222 (381)
T ss_pred -ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec--ccccccc-----------------ccCCCCceEEECCCCCEEE
Confidence 7899999999777665 67899999976655442 1100000 0111225688999998777
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
+.... ..++.+..
T Consensus 223 V~~~~-------------------------------------------------------------------~~~~~v~~ 235 (381)
T COG3391 223 VANDG-------------------------------------------------------------------SGSNNVLK 235 (381)
T ss_pred EEecc-------------------------------------------------------------------CCCceEEE
Confidence 65410 01467777
Q ss_pred EeCCCCceeEEE-ecccccceEEEEEcCCCCeEEEEe-CCCcEEEEEecCCcCCcccCCCC
Q psy15549 396 YDTQHASPFAFI-ANIHYTKLTDITWSSDGKVLIASS-TDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 396 wd~~~~~~~~~~-~~~h~~~v~~~~~spdg~~l~s~s-~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
.|..++...... ..+-. ....+..+|+|+++.+.. ..+.+.+-|..+..+........
T Consensus 236 id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~ 295 (381)
T COG3391 236 IDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGN 295 (381)
T ss_pred EeCCCceEEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccc
Confidence 777777665542 11222 466789999999888874 45889999988877666554433
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.023 Score=55.07 Aligned_cols=197 Identities=15% Similarity=0.073 Sum_probs=86.2
Q ss_pred EeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccccc-CcEEEEEEccCCCEEE
Q psy15549 19 VDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ-KAVNVVRFSPNGELLA 97 (621)
Q Consensus 19 l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~l~~spdg~~la 97 (621)
=+|.+||+ .+|.++..||.-.+| +-|+.+++... |..+. .......++|+.+.++
T Consensus 41 ~~ft~dG~----kllF~s~~dg~~nly------------~lDL~t~~i~Q--------LTdg~g~~~~g~~~s~~~~~~~ 96 (386)
T PF14583_consen 41 NCFTDDGR----KLLFASDFDGNRNLY------------LLDLATGEITQ--------LTDGPGDNTFGGFLSPDDRALY 96 (386)
T ss_dssp --B-TTS-----EEEEEE-TTSS-EEE------------EEETTT-EEEE-----------SS-B-TTT-EE-TTSSEEE
T ss_pred CCcCCCCC----EEEEEeccCCCcceE------------EEEcccCEEEE--------CccCCCCCccceEEecCCCeEE
Confidence 36888987 466677778877744 55555554322 22222 2223456778888877
Q ss_pred EEc-CCceEEEEeccCccccccceecccccccCCCeEEEEEC--CCCCEEEEEeC----------------------CCc
Q psy15549 98 SGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFS--PNGELLASGDD----------------------EST 152 (621)
Q Consensus 98 s~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s--p~g~~l~s~s~----------------------dg~ 152 (621)
... ...++-.++.+.+ ....+......+-...|. .++..++-.-. ...
T Consensus 97 Yv~~~~~l~~vdL~T~e-------~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~ 169 (386)
T PF14583_consen 97 YVKNGRSLRRVDLDTLE-------ERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCR 169 (386)
T ss_dssp EEETTTEEEEEETTT---------EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EE
T ss_pred EEECCCeEEEEECCcCc-------EEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCce
Confidence 654 5667777777653 222223334444445553 35555443211 012
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeC---CC-eEEEEECCC-CcE
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSV---DN-TAIMWDVHK-GKN 226 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~---dg-~i~vwd~~~-~~~ 226 (621)
|.-.|+.+++. ..+.....-+..+.|+|. ...|+.|-+ +. .-+||-+++ +..
T Consensus 170 i~~idl~tG~~----------------------~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~ 227 (386)
T PF14583_consen 170 IFTIDLKTGER----------------------KVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSN 227 (386)
T ss_dssp EEEEETTT--E----------------------EEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS--
T ss_pred EEEEECCCCce----------------------eEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCc
Confidence 33334444331 222233455678899994 455555543 22 135565443 333
Q ss_pred EEEeccCC--cceEEEEEcCCCCEEEEEeC-----CCcEEEEEccCcee
Q psy15549 227 LGILTEHK--KFVQGVAWDPKNQYVATLSS-----DRSLRTYSIQSKKV 268 (621)
Q Consensus 227 ~~~~~~~~--~~v~~l~~sp~~~~l~s~~~-----dg~i~iwd~~~~~~ 268 (621)
...+..+. ..+..=-|.|||..|.--+. +..|.-+|+.+++.
T Consensus 228 ~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~ 276 (386)
T PF14583_consen 228 VKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGER 276 (386)
T ss_dssp -EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--E
T ss_pred ceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCc
Confidence 44443332 23445568999987664332 34566777777654
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.015 Score=51.98 Aligned_cols=110 Identities=9% Similarity=0.062 Sum_probs=78.3
Q ss_pred CCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15549 141 GELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWD 220 (621)
Q Consensus 141 g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd 220 (621)
..+++.|+..+.+.-.|..+++.. |+. --..+|.+-+.- -|++++.|+..|.+++.+
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~-----------------We~-----ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~ 79 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLI-----------------WEA-----ILGVRIECSAIV-VGDFVVLGCYSGGLYFLC 79 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEE-----------------eeh-----hhCceeeeeeEE-ECCEEEEEEccCcEEEEE
Confidence 457778888888888888888743 111 112223322222 467899999999999999
Q ss_pred CCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 221 VHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 221 ~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
..+|.....+.....--......+++..+..++.|+..+..|.++...+....
T Consensus 80 ~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 80 VKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred ecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecc
Confidence 99998877775433222234567889999999999999999999988776643
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0031 Score=60.94 Aligned_cols=151 Identities=13% Similarity=0.156 Sum_probs=74.8
Q ss_pred EEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccC-CCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 87 VRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQ-KAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 87 l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
=+|.+||+.|+.++ ++.-.+|.+.-.. ..+.+|..+. .......++|+.+.++.......|+-.|+.+.+.
T Consensus 41 ~~ft~dG~kllF~s~~dg~~nly~lDL~t------~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~ 114 (386)
T PF14583_consen 41 NCFTDDGRKLLFASDFDGNRNLYLLDLAT------GEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEE 114 (386)
T ss_dssp --B-TTS-EEEEEE-TTSS-EEEEEETTT-------EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--E
T ss_pred CCcCCCCCEEEEEeccCCCcceEEEEccc------CEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcE
Confidence 46788998777655 5555555554433 2233333332 2233466788888887666667888889988764
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEE--CCCCCEEEEEe----------------------CCCeEEEE
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISW--SPTSTHLISGS----------------------VDNTAIMW 219 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~--spd~~~l~s~~----------------------~dg~i~vw 219 (621)
. ..+.....-+-...| +.|+..++-.- -...|.-.
T Consensus 115 ~---------------------~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~i 173 (386)
T PF14583_consen 115 R---------------------VVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTI 173 (386)
T ss_dssp E---------------------EEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEE
T ss_pred E---------------------EEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEE
Confidence 2 223333333333444 33555543221 12346667
Q ss_pred ECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCC-----cEEEEEccC
Q psy15549 220 DVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDR-----SLRTYSIQS 265 (621)
Q Consensus 220 d~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg-----~i~iwd~~~ 265 (621)
|+.+|+....+. ....+..+.|+|....++.-+..| .-|||-+++
T Consensus 174 dl~tG~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~ 223 (386)
T PF14583_consen 174 DLKTGERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINT 223 (386)
T ss_dssp ETTT--EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEET
T ss_pred ECCCCceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEc
Confidence 888887655553 456677899999765555444433 236776654
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.002 Score=64.90 Aligned_cols=177 Identities=12% Similarity=0.120 Sum_probs=90.6
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
.-....|.++|+|+ ++++++ ||... |+...... ....+.-...+|++.
T Consensus 32 ~~~p~~ls~npngr-----~v~V~g-~geY~--------------iyt~~~~r------------~k~~G~g~~~vw~~~ 79 (443)
T PF04053_consen 32 EIYPQSLSHNPNGR-----FVLVCG-DGEYE--------------IYTALAWR------------NKAFGSGLSFVWSSR 79 (443)
T ss_dssp SS--SEEEE-TTSS-----EEEEEE-TTEEE--------------EEETTTTE------------EEEEEE-SEEEE-TS
T ss_pred CcCCeeEEECCCCC-----EEEEEc-CCEEE--------------EEEccCCc------------ccccCceeEEEEecC
Confidence 33578999999998 777755 44444 55411110 112345566789997
Q ss_pred CCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 93 GELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 93 g~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
+++.+.-....|.|+.--.. .....+.- ...+..+-. |.+|+..+.+ .|.+||+.+++.+..
T Consensus 80 n~yAv~~~~~~I~I~kn~~~-------~~~k~i~~-~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~------ 141 (443)
T PF04053_consen 80 NRYAVLESSSTIKIYKNFKN-------EVVKSIKL-PFSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRR------ 141 (443)
T ss_dssp SEEEEE-TTS-EEEEETTEE--------TT------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEE------
T ss_pred ccEEEEECCCeEEEEEcCcc-------ccceEEcC-CcccceEEc---CcEEEEECCC-CEEEEEhhHcceeeE------
Confidence 77666666788888643222 11111111 112333322 8777777655 899999999986532
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC-----------cEEEEeccCCcceEEEE
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG-----------KNLGILTEHKKFVQGVA 241 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~-----------~~~~~~~~~~~~v~~l~ 241 (621)
.. -..|..+.|+++|.+++..+.+ .+.|++.... .....+..-...|.+.+
T Consensus 142 ---------------i~--v~~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~ 203 (443)
T PF04053_consen 142 ---------------ID--VSAVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGC 203 (443)
T ss_dssp ---------------ES--S-E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEE
T ss_pred ---------------Ee--cCCCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEE
Confidence 22 2248999999999999998855 5777764322 02333333256788889
Q ss_pred EcCCCCEEEEEeCCCcEEE
Q psy15549 242 WDPKNQYVATLSSDRSLRT 260 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~i 260 (621)
|..+ .|+-.+.. .|+.
T Consensus 204 W~~d--~fiYtT~~-~lkY 219 (443)
T PF04053_consen 204 WVED--CFIYTTSN-HLKY 219 (443)
T ss_dssp EETT--EEEEE-TT-EEEE
T ss_pred EEcC--EEEEEcCC-eEEE
Confidence 9865 44444444 6665
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0058 Score=59.95 Aligned_cols=187 Identities=11% Similarity=0.108 Sum_probs=107.3
Q ss_pred eEEEEecC----------CceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc
Q psy15549 31 YRIVTGGA----------DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD 100 (621)
Q Consensus 31 ~~l~tg~~----------dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~ 100 (621)
.+|++|.. .|.|. ++++.........+++.... ...++|++++-- +.+|+++.
T Consensus 43 ~~ivVGT~~~~~~~~~~~~Gri~--------------v~~i~~~~~~~~~l~~i~~~-~~~g~V~ai~~~--~~~lv~~~ 105 (321)
T PF03178_consen 43 EYIVVGTAFNYGEDPEPSSGRIL--------------VFEISESPENNFKLKLIHST-EVKGPVTAICSF--NGRLVVAV 105 (321)
T ss_dssp EEEEEEEEE--TTSSS-S-EEEE--------------EEEECSS-----EEEEEEEE-EESS-EEEEEEE--TTEEEEEE
T ss_pred CEEEEEecccccccccccCcEEE--------------EEEEEcccccceEEEEEEEE-eecCcceEhhhh--CCEEEEee
Confidence 48888753 28888 66666531111123333332 346889998866 44477777
Q ss_pred CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC-CCCCCCCCcccccccc
Q psy15549 101 DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD-LPEFPSSNLDEENVNK 179 (621)
Q Consensus 101 d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~ 179 (621)
.+.+.+|++.... .+.....+.. ...+.++... +++|+.|.....+.++..+.... +.
T Consensus 106 g~~l~v~~l~~~~----~l~~~~~~~~-~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~-------------- 164 (321)
T PF03178_consen 106 GNKLYVYDLDNSK----TLLKKAFYDS-PFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLI-------------- 164 (321)
T ss_dssp TTEEEEEEEETTS----SEEEEEEE-B-SSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EE--------------
T ss_pred cCEEEEEEccCcc----cchhhheecc-eEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEE--------------
Confidence 8999999999874 1122222222 2255555554 66999999888899886655221 10
Q ss_pred cceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-------Cc-EE---EEeccCCcceEEE---EEcC-
Q psy15549 180 EHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK-------GK-NL---GILTEHKKFVQGV---AWDP- 244 (621)
Q Consensus 180 ~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~-------~~-~~---~~~~~~~~~v~~l---~~sp- 244 (621)
..........++++.|-++++.++.++.+|.+.++.... +. .+ ..+. ....|+++ ++.|
T Consensus 165 -----~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~-lg~~v~~~~~~~l~~~ 238 (321)
T PF03178_consen 165 -----LVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFH-LGDIVNSFRRGSLIPR 238 (321)
T ss_dssp -----EEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE--SS-EEEEEE--SS--
T ss_pred -----EEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEE-CCCccceEEEEEeeec
Confidence 111223455688999987767999999999999998752 22 22 2221 23456666 4445
Q ss_pred -CCC------EEEEEeCCCcEEEE
Q psy15549 245 -KNQ------YVATLSSDRSLRTY 261 (621)
Q Consensus 245 -~~~------~l~s~~~dg~i~iw 261 (621)
.+. .++.++.+|.|.+.
T Consensus 239 ~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 239 SGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred CCCCcccccceEEEEecCCEEEEE
Confidence 222 47778899988844
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.045 Score=49.83 Aligned_cols=101 Identities=18% Similarity=0.243 Sum_probs=68.4
Q ss_pred EEEECCC-CCEEEEEeCCCc-EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe
Q psy15549 134 VVRFSPN-GELLASGDDEST-IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS 211 (621)
Q Consensus 134 ~i~~sp~-g~~l~s~s~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~ 211 (621)
.|+|+|. ..-++.+-.-|+ ..++|....+....+... ..+.+.+|. .|||||.+|...-
T Consensus 72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~-------------~~RHfyGHG------vfs~dG~~LYATE 132 (366)
T COG3490 72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQ-------------EGRHFYGHG------VFSPDGRLLYATE 132 (366)
T ss_pred CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecc-------------cCceeeccc------ccCCCCcEEEeec
Confidence 4677774 345566655554 557888877765433111 013344553 5999999988765
Q ss_pred CC-----CeEEEEECCCC-cEEEEeccCCcceEEEEEcCCCCEEEEEe
Q psy15549 212 VD-----NTAIMWDVHKG-KNLGILTEHKKFVQGVAWDPKNQYVATLS 253 (621)
Q Consensus 212 ~d-----g~i~vwd~~~~-~~~~~~~~~~~~v~~l~~sp~~~~l~s~~ 253 (621)
+| |.|-|||.+.+ +.+..+..|.-....+.|.+||+.++.+.
T Consensus 133 ndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 133 NDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred CCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 43 78999998753 45667777877788899999999988663
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.15 Score=54.59 Aligned_cols=340 Identities=13% Similarity=0.117 Sum_probs=165.1
Q ss_pred cCcEEEEEEccCC------CEEEEEc-CCce-EEEEeccCccccccceecccccc--cCCCeEEEEECCCCCEEEEEeCC
Q psy15549 81 QKAVNVVRFSPNG------ELLASGD-DVGK-EIWYLTERESGIANVEFASDLSR--HQKAVNVVRFSPNGELLASGDDE 150 (621)
Q Consensus 81 ~~~V~~l~~spdg------~~las~~-d~~v-~iw~~~~~~~~~~~~~~~~~~~~--h~~~V~~i~~sp~g~~l~s~s~d 150 (621)
...|.|+.++|-| ++++.|. ++.+ .+........ .....+.+ -...|.-..|-.|..+|.++..|
T Consensus 530 e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~-----~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgd 604 (1096)
T KOG1897|consen 530 EYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLIL-----ITHEQLSGEIIPRSILLTTFEGDIHYLLVALGD 604 (1096)
T ss_pred cceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcce-----eeeeccCCCccchheeeEEeeccceEEEEEcCC
Confidence 5689999999842 3677776 5544 3333333210 11111111 22345556666678899999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
|.+.-|-++.......- .+...-...++.--.|+..++.-+.+..|.-..+|.- +++.+.+-
T Consensus 605 G~l~~fv~d~~tg~lsd-----------------~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~-n~kLv~sp 666 (1096)
T KOG1897|consen 605 GALLYFVLDINTGQLSD-----------------RKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSS-NGKLVYSP 666 (1096)
T ss_pred ceEEEEEEEcccceEcc-----------------ccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEec-CCcEEEec
Confidence 99887765544321100 0111112334444556554443333444665666653 44443322
Q ss_pred ccCCcceE-EEEEcCC--CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 231 TEHKKFVQ-GVAWDPK--NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 231 ~~~~~~v~-~l~~sp~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
-.- ..+. .+.|+.+ ...|+++ ..+.+++.-+..-+.+..- . -+.....+.+++
T Consensus 667 ls~-kev~~~c~f~s~a~~d~l~~~-~~~~l~i~tid~iqkl~ir---t-------------------vpl~~~prrI~~ 722 (1096)
T KOG1897|consen 667 LSL-KEVNHMCPFNSDAYPDSLASA-NGGALTIGTIDEIQKLHIR---T-------------------VPLGESPRRICY 722 (1096)
T ss_pred cch-HHhhhhcccccccCCceEEEe-cCCceEEEEecchhhccee---e-------------------ecCCCChhheEe
Confidence 111 1111 1223322 2345544 4456777766543322111 0 112233467788
Q ss_pred cCCCCeEEeccccccCCCCC---CcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEE
Q psy15549 308 SPDGQLLIAPSGCLENSDST---RKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIV 384 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 384 (621)
.+....+.+.+......... -+.......+. ......+..|+........+-....+..+ ++.++
T Consensus 723 q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD----~nTf~vl~~hef~~~E~~~Si~s~~~~~d--------~~t~~ 790 (1096)
T KOG1897|consen 723 QESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLD----QNTFEVLSSHEFERNETALSIISCKFTDD--------PNTYY 790 (1096)
T ss_pred cccceEEEEEecccccchhhcCCcceEEEEEEec----CCceeEEeeccccccceeeeeeeeeecCC--------CceEE
Confidence 77555555555332222221 00000001111 11111222222111111111110111111 13555
Q ss_pred EEEE----------cCCcEEEEeCCCCceeEEEec-ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCC
Q psy15549 385 IAVA----------TENNILLYDTQHASPFAFIAN-IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPP 453 (621)
Q Consensus 385 ~~~~----------~dg~i~iwd~~~~~~~~~~~~-~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~ 453 (621)
++|. ..|.|.+|....+..+..... .-.+.|.++.- -+|++||.- ...|++|++.+++.++.-..+
T Consensus 791 vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~-fngkllA~I--n~~vrLye~t~~~eLr~e~~~ 867 (1096)
T KOG1897|consen 791 VVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVE-FNGKLLAGI--NQSVRLYEWTTERELRIECNI 867 (1096)
T ss_pred EEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhh-hCCeEEEec--CcEEEEEEccccceehhhhcc
Confidence 5554 247899998887544444321 12344555432 267766654 568999999999777777777
Q ss_pred CCcccccCCCCCCCCcccCCCcccHHHhc
Q psy15549 454 SGEESKENDPTKGEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 454 ~~~~~~~~~~~~~~~~~s~~~~~~~~~w~ 482 (621)
...+..+.....|..++.++.-+++.+..
T Consensus 868 ~~~~~aL~l~v~gdeI~VgDlm~Sitll~ 896 (1096)
T KOG1897|consen 868 SNPIIALDLQVKGDEIAVGDLMRSITLLQ 896 (1096)
T ss_pred cCCeEEEEEEecCcEEEEeeccceEEEEE
Confidence 77777777777888777777666665543
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.059 Score=51.54 Aligned_cols=158 Identities=10% Similarity=0.097 Sum_probs=90.8
Q ss_pred cCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 91 PNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 91 pdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
..++.|+.|.++++.+++..... ...... +...|..+...++-+.|++-+ |+.++++++..-.........
T Consensus 5 ~~~~~L~vGt~~Gl~~~~~~~~~------~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~ 75 (275)
T PF00780_consen 5 SWGDRLLVGTEDGLYVYDLSDPS------KPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPL 75 (275)
T ss_pred cCCCEEEEEECCCEEEEEecCCc------cceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccc
Confidence 45788999998889999883221 111111 223399999999877766655 499999998877654311000
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEE--ECCCC-CEEEEEeCCCeEEEEECCCC-----cEEEEeccCCcceEEEEE
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDIS--WSPTS-THLISGSVDNTAIMWDVHKG-----KNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~--~spd~-~~l~s~~~dg~i~vwd~~~~-----~~~~~~~~~~~~v~~l~~ 242 (621)
...... ...........+..++ -...+ ..|+++. ...|.+|..... +..+.+. -...+..++|
T Consensus 76 ~~~~~~-------~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~-kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~ 146 (275)
T PF00780_consen 76 AFPKSR-------SLPTKLPETKGVSFFAVNGGHEGSRRLCVAV-KKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAF 146 (275)
T ss_pred cccccc-------cccccccccCCeeEEeeccccccceEEEEEE-CCEEEEEEEECCcccccceeEEEE-cCCCcEEEEE
Confidence 000000 0000111223344444 11233 3444444 558888887653 3445553 3467889999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceee
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVI 269 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~ 269 (621)
. ++.|+.|..++ ..+.|+.++...
T Consensus 147 ~--~~~i~v~~~~~-f~~idl~~~~~~ 170 (275)
T PF00780_consen 147 L--GNKICVGTSKG-FYLIDLNTGSPS 170 (275)
T ss_pred e--CCEEEEEeCCc-eEEEecCCCCce
Confidence 8 66777776554 788999876543
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.031 Score=56.47 Aligned_cols=69 Identities=13% Similarity=0.102 Sum_probs=46.5
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC-CcceEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy15549 192 LEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH-KKFVQGVAWDPKNQYVATLSSDRSLRTYS 262 (621)
Q Consensus 192 ~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~v~~l~~sp~~~~l~s~~~dg~i~iwd 262 (621)
.+++..|+.||+|+++|.-..+|.+.+....-.+.+..+... ......+.|.-+...++.- ...|.+..
T Consensus 216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~~--~~~l~lvg 285 (410)
T PF04841_consen 216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLSW--EDELLLVG 285 (410)
T ss_pred CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEEe--CCEEEEEC
Confidence 457999999999999999999999999987655555555433 3455677777544333222 33444444
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.083 Score=50.54 Aligned_cols=155 Identities=14% Similarity=0.180 Sum_probs=89.9
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEcCCceEEEEecc
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTE 111 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~ 111 (621)
.|+.|..+| +. +++......... ..+...|..+...++-+.|++-+|+.+.++++..
T Consensus 9 ~L~vGt~~G-l~--------------~~~~~~~~~~~~--------i~~~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~ 65 (275)
T PF00780_consen 9 RLLVGTEDG-LY--------------VYDLSDPSKPTR--------ILKLSSITQLSVLPELNLLLVLSDGQLYVYDLDS 65 (275)
T ss_pred EEEEEECCC-EE--------------EEEecCCcccee--------EeecceEEEEEEecccCEEEEEcCCccEEEEchh
Confidence 899999999 55 677622221111 1223349999999999999988899999999876
Q ss_pred Cccccccceec-------ccccccCCCeEEEE--ECCCCCEEEEEeCCCcEEEEEccCCCCCC-CCCCCCcccccccccc
Q psy15549 112 RESGIANVEFA-------SDLSRHQKAVNVVR--FSPNGELLASGDDESTIIVWKQKTDQDLP-EFPSSNLDEENVNKEH 181 (621)
Q Consensus 112 ~~~~~~~~~~~-------~~~~~h~~~V~~i~--~sp~g~~l~s~s~dg~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~ 181 (621)
-.......... .........+..++ -...+...+.......|.+|......... .
T Consensus 66 l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~--------------- 130 (275)
T PF00780_consen 66 LEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSK--------------- 130 (275)
T ss_pred hccccccccccccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccc---------------
Confidence 53221100000 00111223444444 11234334444445589999887642211 0
Q ss_pred eeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 182 WIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
..+.+ .-...+.+++|. ++.|+.|..+ ...+.|+.++.....+
T Consensus 131 --~~ke~-~lp~~~~~i~~~--~~~i~v~~~~-~f~~idl~~~~~~~l~ 173 (275)
T PF00780_consen 131 --LLKEI-SLPDPPSSIAFL--GNKICVGTSK-GFYLIDLNTGSPSELL 173 (275)
T ss_pred --eeEEE-EcCCCcEEEEEe--CCEEEEEeCC-ceEEEecCCCCceEEe
Confidence 01222 234678899998 4567777744 4888999877654443
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.11 Score=54.14 Aligned_cols=29 Identities=14% Similarity=0.130 Sum_probs=24.7
Q ss_pred CcEEEEEEcCCcEEEEeCCCCceeEEEec
Q psy15549 381 YRIVIAVATENNILLYDTQHASPFAFIAN 409 (621)
Q Consensus 381 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 409 (621)
++.+++++.||.|+.+|..+|+.+-....
T Consensus 406 g~~v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 406 GNLVFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred CCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence 46788888999999999999998887753
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00049 Score=68.77 Aligned_cols=82 Identities=12% Similarity=0.242 Sum_probs=72.5
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceE-EEEEcCCCCEEEEEeCCCcEEEEEccCcee
Q psy15549 190 GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ-GVAWDPKNQYVATLSSDRSLRTYSIQSKKV 268 (621)
Q Consensus 190 ~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~-~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 268 (621)
.-...+.-+.|+|.-.++|.+..+|.|.+..+. .+.+.++.-+...++ +++|.|||+.|++|-.||+|++.|+.++..
T Consensus 18 ~l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~ 96 (665)
T KOG4640|consen 18 SLPINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR 96 (665)
T ss_pred ccccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence 345568889999999999999999999999987 888888876777777 999999999999999999999999999887
Q ss_pred eeec
Q psy15549 269 ISRA 272 (621)
Q Consensus 269 ~~~~ 272 (621)
+...
T Consensus 97 l~~~ 100 (665)
T KOG4640|consen 97 LVSF 100 (665)
T ss_pred eecc
Confidence 7653
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.03 Score=60.05 Aligned_cols=133 Identities=16% Similarity=0.141 Sum_probs=84.1
Q ss_pred CCEEEEE-eCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCC-eEEEEECC-----CCCEEEEEeCC
Q psy15549 141 GELLASG-DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLED-VYDISWSP-----TSTHLISGSVD 213 (621)
Q Consensus 141 g~~l~s~-s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~sp-----d~~~l~s~~~d 213 (621)
.++|+.- .....|+-.|+..++.+ ..+..|... |..++-.. +...-+.|-.+
T Consensus 493 ~~mil~~~~~~~~ly~mDLe~GKVV---------------------~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~ 551 (794)
T PF08553_consen 493 RNMILLDPNNPNKLYKMDLERGKVV---------------------EEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSD 551 (794)
T ss_pred cceEeecCCCCCceEEEecCCCcEE---------------------EEeecCCCcceeEecccccccccCCCceEEEECC
Confidence 3344443 34567888899888854 333444332 44433211 13345677778
Q ss_pred CeEEEEECCCCc-EEEEec----cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccc
Q psy15549 214 NTAIMWDVHKGK-NLGILT----EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDK 288 (621)
Q Consensus 214 g~i~vwd~~~~~-~~~~~~----~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (621)
..+..||.+-.. .+..-. ......+|++-..+| +||+|+.+|.||+||- .+...++
T Consensus 552 n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT----------------- 612 (794)
T PF08553_consen 552 NSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKT----------------- 612 (794)
T ss_pred CceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhh-----------------
Confidence 899999998532 221111 133457788877776 5888999999999994 3322111
Q ss_pred cccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 289 VVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 289 ~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
....+..+|.++..+.||+++++.+
T Consensus 613 -----~lp~lG~pI~~iDvt~DGkwilaTc 637 (794)
T PF08553_consen 613 -----ALPGLGDPIIGIDVTADGKWILATC 637 (794)
T ss_pred -----cCCCCCCCeeEEEecCCCcEEEEee
Confidence 1234567889999999999999877
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.096 Score=53.57 Aligned_cols=114 Identities=18% Similarity=0.175 Sum_probs=67.8
Q ss_pred cEEEEEEccCCCEEEEEc--CC----ceEEEEeccCccccccceecc-cccccCCCeEEEEECCCCCEEEEEeCCC----
Q psy15549 83 AVNVVRFSPNGELLASGD--DV----GKEIWYLTERESGIANVEFAS-DLSRHQKAVNVVRFSPNGELLASGDDES---- 151 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~--d~----~v~iw~~~~~~~~~~~~~~~~-~~~~h~~~V~~i~~sp~g~~l~s~s~dg---- 151 (621)
.+....+||||++||.+- .| .++++|+.++ ..+. .+... ....+.|.++++.|+....+.
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg-------~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~ 195 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETG-------KFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRT 195 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTT-------EEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCC-------cCcCCccccc--ccceEEEeCCCCEEEEEEeCccccc
Confidence 444678999999999763 22 2788888876 2222 11111 122399999988776654332
Q ss_pred -------cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCC--CeEEEEECCCCCEEEEEeC---C-CeEEE
Q psy15549 152 -------TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLE--DVYDISWSPTSTHLISGSV---D-NTAIM 218 (621)
Q Consensus 152 -------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~i~~spd~~~l~s~~~---d-g~i~v 218 (621)
.|+.|.+.+...-. ...+..... ....+..++|+++|+.... + ..+.+
T Consensus 196 ~~~~~~~~v~~~~~gt~~~~d-------------------~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~ 256 (414)
T PF02897_consen 196 SDSGYPRQVYRHKLGTPQSED-------------------ELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYL 256 (414)
T ss_dssp -CCGCCEEEEEEETTS-GGG--------------------EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEE
T ss_pred ccCCCCcEEEEEECCCChHhC-------------------eeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEE
Confidence 36777776654210 122233222 2678889999998876443 2 45788
Q ss_pred EECCCC
Q psy15549 219 WDVHKG 224 (621)
Q Consensus 219 wd~~~~ 224 (621)
.++..+
T Consensus 257 ~d~~~~ 262 (414)
T PF02897_consen 257 LDLDDG 262 (414)
T ss_dssp EECCCT
T ss_pred Eecccc
Confidence 888764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.06 Score=54.02 Aligned_cols=206 Identities=14% Similarity=0.109 Sum_probs=128.9
Q ss_pred EEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEE
Q psy15549 17 LSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL 96 (621)
Q Consensus 17 ~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~l 96 (621)
..+++++++. ...++...+..|.++|.......+++.+ + .....++++++++.+
T Consensus 77 ~~i~v~~~~~----~vyv~~~~~~~v~vid~~~~~~~~~~~v--------------------G--~~P~~~~~~~~~~~v 130 (381)
T COG3391 77 AGVAVNPAGN----KVYVTTGDSNTVSVIDTATNTVLGSIPV--------------------G--LGPVGLAVDPDGKYV 130 (381)
T ss_pred cceeeCCCCC----eEEEecCCCCeEEEEcCcccceeeEeee--------------------c--cCCceEEECCCCCEE
Confidence 4667777776 3555555668888444222222211111 1 155678999999887
Q ss_pred EEEcC----CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcEEEEEccCCCCCCCCCCCC
Q psy15549 97 ASGDD----VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 97 as~~d----~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
..+.. +.+.+.+.... ...........+ ..++++|+|+.++.+. .++.|.+.|........ -.
T Consensus 131 YV~n~~~~~~~vsvid~~t~-------~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~--- 198 (381)
T COG3391 131 YVANAGNGNNTVSVIDAATN-------KVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GS--- 198 (381)
T ss_pred EEEecccCCceEEEEeCCCC-------eEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cc---
Confidence 77653 44555555444 333333222234 7899999999666655 78899999976665331 00
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEeccCCc-ceEEEEEcCCCC
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD---NTAIMWDVHKGKNLGILTEHKK-FVQGVAWDPKNQ 247 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~-~v~~l~~sp~~~ 247 (621)
......-......+.++|+|..+.+.... +.+...|..++........-.. ....+.++|+|.
T Consensus 199 -------------~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~ 265 (381)
T COG3391 199 -------------VGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGK 265 (381)
T ss_pred -------------cccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCC
Confidence 00011223345678999999876665543 5899999988877665222122 456789999999
Q ss_pred EEEEEeC-CCcEEEEEccCceeeeecc
Q psy15549 248 YVATLSS-DRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 248 ~l~s~~~-dg~i~iwd~~~~~~~~~~~ 273 (621)
++.+... .+.+.+-|..+........
T Consensus 266 ~~yv~~~~~~~V~vid~~~~~v~~~~~ 292 (381)
T COG3391 266 AAYVANSQGGTVSVIDGATDRVVKTGP 292 (381)
T ss_pred EEEEEecCCCeEEEEeCCCCceeeeec
Confidence 9888754 4889999988877666543
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.39 E-value=4.9e-05 Score=75.65 Aligned_cols=174 Identities=17% Similarity=0.202 Sum_probs=106.3
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccc-ccceeeccccccccCcE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESG-IANVEFASDLSRHQKAV 84 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~-~~~~~~~~~~~~h~~~V 84 (621)
.++.-.|..+.++++|++-.. +.||+|-...... ..+.|||..++-.. .....+.. +.....
T Consensus 95 ~E~tp~~ar~Ct~lAwneLDt----n~LAagldkhrnd----------s~~~Iwdi~s~ltvPke~~~fs~---~~l~gq 157 (783)
T KOG1008|consen 95 AEVTPGYARPCTSLAWNELDT----NHLAAGLDKHRND----------SSLKIWDINSLLTVPKESPLFSS---STLDGQ 157 (783)
T ss_pred ceecccccccccccccccccH----HHHHhhhhhhccc----------CCccceecccccCCCcccccccc---ccccCc
Confidence 355667788999999998643 3888884322221 23338888776221 11111111 234456
Q ss_pred EEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEc-cCC
Q psy15549 85 NVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQ-KTD 161 (621)
Q Consensus 85 ~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~-~~~ 161 (621)
.+++|-.+.+++.+|. ...+.++|+.... .....-.+..+..+...| .++|+++-. ||.|.+||. ..-
T Consensus 158 ns~cwlrd~klvlaGm~sr~~~ifdlRqs~--------~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rni 228 (783)
T KOG1008|consen 158 NSVCWLRDTKLVLAGMTSRSVHIFDLRQSL--------DSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNI 228 (783)
T ss_pred cccccccCcchhhcccccchhhhhhhhhhh--------hhhhhhhhhhcccceecCCCCCceeccc-cCceeeccchhhh
Confidence 6899998888888888 6689999987532 111122334566778888 777887766 899999993 222
Q ss_pred CCC-CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeC-CCeEEEEECC
Q psy15549 162 QDL-PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSV-DNTAIMWDVH 222 (621)
Q Consensus 162 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~-dg~i~vwd~~ 222 (621)
+.. ..+ ..........+..++|+|.. ..+++... .++|++||+.
T Consensus 229 enpl~~i-----------------~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 229 ENPLQII-----------------LRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred ccHHHHH-----------------hhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 211 100 01111223358999999943 35555555 4789999985
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.11 Score=49.96 Aligned_cols=148 Identities=11% Similarity=0.124 Sum_probs=84.1
Q ss_pred EEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 88 RFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 88 ~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
.|.++...|+.+. .+.|.-|+...+. ...+. +...+.++.....+..|+++.. -+.+++.+++....
T Consensus 31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~--------~~~~~-~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t 99 (307)
T COG3386 31 VWDPDRGALLWVDILGGRIHRLDPETGK--------KRVFP-SPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKIT 99 (307)
T ss_pred cCcCCCCEEEEEeCCCCeEEEecCCcCc--------eEEEE-CCCCcccceeecCCCeEEEEcc--ccEEEeccCCceeE
Confidence 4777777776666 5567777766442 11121 2233344444444445555543 36677765554321
Q ss_pred CCCCCCcccccccccceeeeeeecC-CCCCeEEEEECCCCCEEEEEeC-----------CCeEEEEECCCCcEEEEeccC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRG-HLEDVYDISWSPTSTHLISGSV-----------DNTAIMWDVHKGKNLGILTEH 233 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~spd~~~l~s~~~-----------dg~i~vwd~~~~~~~~~~~~~ 233 (621)
.+. ....+ .....+.+...|+|.+.++.-. -|.|+.+|. .+..+..+..+
T Consensus 100 ~~~-----------------~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~ 161 (307)
T COG3386 100 LLA-----------------EPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDD 161 (307)
T ss_pred Eec-----------------cccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCc
Confidence 110 11111 1245567888888876654332 143444443 56666666665
Q ss_pred CcceEEEEEcCCCCEEEEEeCC-CcEEEEEcc
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSD-RSLRTYSIQ 264 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~d-g~i~iwd~~ 264 (621)
-..-..|+||||++.|+.+... +.|.-|++.
T Consensus 162 ~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d 193 (307)
T COG3386 162 LTIPNGLAFSPDGKTLYVADTPANRIHRYDLD 193 (307)
T ss_pred EEecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence 5666789999999988877664 677777765
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.011 Score=62.17 Aligned_cols=194 Identities=14% Similarity=0.145 Sum_probs=101.3
Q ss_pred CCeEEEeccccccCCcceEEEEec------CCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGG------ADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~------~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
..+.+.+++|||+ .+|... .|+.-. ||-...+..... ...+ .....-
T Consensus 350 ~~vsspaiSpdG~-----~vA~v~~~~~~~~d~~s~--------------Lwv~~~gg~~~~------lt~g--~~~t~P 402 (591)
T PRK13616 350 GNITSAALSRSGR-----QVAAVVTLGRGAPDPASS--------------LWVGPLGGVAVQ------VLEG--HSLTRP 402 (591)
T ss_pred cCcccceECCCCC-----EEEEEEeecCCCCCcceE--------------EEEEeCCCccee------eecC--CCCCCc
Confidence 3678899999998 666554 244445 444332222111 0222 237888
Q ss_pred EEccCCCEEEEEcCC-ce-EEEEeccCccccc--cc--eecccccccCCCeEEEEECCCCCEEEEEeCCCcEEE---EEc
Q psy15549 88 RFSPNGELLASGDDV-GK-EIWYLTERESGIA--NV--EFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIV---WKQ 158 (621)
Q Consensus 88 ~~spdg~~las~~d~-~v-~iw~~~~~~~~~~--~~--~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~v---wd~ 158 (621)
.|+|||..|++..++ .+ ++.+.... .... .+ ..... ...+.|..+.|||||..||... +|.|.+ -..
T Consensus 403 sWspDG~~lw~v~dg~~~~~v~~~~~~-gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~ 478 (591)
T PRK13616 403 SWSLDADAVWVVVDGNTVVRVIRDPAT-GQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQT 478 (591)
T ss_pred eECCCCCceEEEecCcceEEEeccCCC-ceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeC
Confidence 999999988887644 21 22211110 0000 00 00111 2345799999999999888766 467776 333
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeee-cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-CcEEEEecc--CC
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKIL-RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK-GKNLGILTE--HK 234 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~--~~ 234 (621)
..+. ..+. ....+ ..-...+..+.|..++.++ ++..++...+|.+.- |.....+.. ..
T Consensus 479 ~~G~--~~l~---------------~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~~ 540 (591)
T PRK13616 479 EDGQ--YALT---------------NPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSRNLS 540 (591)
T ss_pred CCCc--eeec---------------ccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEecCCccccccCCCCcc
Confidence 3332 1110 00112 2233346889999998754 555555444554432 322222222 24
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcE
Q psy15549 235 KFVQGVAWDPKNQYVATLSSDRSL 258 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~dg~i 258 (621)
..+.+++-++. .++....+|.+
T Consensus 541 ~~v~~vaa~~~--~iyv~~~~g~~ 562 (591)
T PRK13616 541 APVVAVAASPS--TVYVTDARAVL 562 (591)
T ss_pred CceEEEecCCc--eEEEEcCCceE
Confidence 56667776652 45555666643
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.001 Score=66.62 Aligned_cols=94 Identities=21% Similarity=0.344 Sum_probs=74.4
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeE-EEEECCCCCEE
Q psy15549 129 QKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVY-DISWSPTSTHL 207 (621)
Q Consensus 129 ~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~spd~~~l 207 (621)
...|.-+.|+|.-.+||.+..+|.|.+..+. -+.+ -.+.-|...++ +++|.|||+.|
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRl---------------------wtip~p~~~v~~sL~W~~DGkll 77 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRL---------------------WTIPIPGENVTASLCWRPDGKLL 77 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-ccee---------------------EeccCCCCccceeeeecCCCCEE
Confidence 3467789999999999999999999999887 3332 23344555566 99999999999
Q ss_pred EEEeCCCeEEEEECCCCcEEEEe-ccCCcceEEEEEcC
Q psy15549 208 ISGSVDNTAIMWDVHKGKNLGIL-TEHKKFVQGVAWDP 244 (621)
Q Consensus 208 ~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~v~~l~~sp 244 (621)
|+|-.||+|++.|++++..+..+ ......|.++-|++
T Consensus 78 aVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 78 AVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred EEEecCCeEEEEEccCCCceeccccccccchheeeccc
Confidence 99999999999999999887763 23456677888863
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.015 Score=61.28 Aligned_cols=161 Identities=12% Similarity=0.124 Sum_probs=88.9
Q ss_pred ccCcEEEEEEccCCCEEEEEc-------CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC-C
Q psy15549 80 HQKAVNVVRFSPNGELLASGD-------DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE-S 151 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~-------d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d-g 151 (621)
....+.+.++||||+.+|... +..-.||-...++. ......+. ......|+|+|+.|++.... .
T Consensus 348 ~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~------~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~ 419 (591)
T PRK13616 348 QMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGV------AVQVLEGH--SLTRPSWSLDADAVWVVVDGNT 419 (591)
T ss_pred cccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCc------ceeeecCC--CCCCceECCCCCceEEEecCcc
Confidence 334688999999999888654 33446776554321 11112222 37788999999888777533 1
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEE---EECCCCcE-E
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIM---WDVHKGKN-L 227 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~v---wd~~~~~~-~ 227 (621)
.+++.+-.....+..+.. .. .+ . .. .....|..+.|||||.+++... +|.|++ -....|.. +
T Consensus 420 ~~~v~~~~~~gql~~~~v--------d~-ge-~-~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l 485 (591)
T PRK13616 420 VVRVIRDPATGQLARTPV--------DA-SA-V-AS--RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYAL 485 (591)
T ss_pred eEEEeccCCCceEEEEec--------cC-ch-h-hh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceee
Confidence 222222211111100000 00 00 0 00 2345799999999999988766 577777 44444541 1
Q ss_pred ---EEec-cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15549 228 ---GILT-EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSI 263 (621)
Q Consensus 228 ---~~~~-~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~ 263 (621)
..+. .-...+..+.|..++.++ ++..++...+|.+
T Consensus 486 ~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 486 TNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV 524 (591)
T ss_pred cccEEeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence 1122 223335789999988854 5555554455554
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.011 Score=58.40 Aligned_cols=148 Identities=9% Similarity=0.129 Sum_probs=96.5
Q ss_pred cCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCC--E-----EEEEeCCCcEEEEEccCC
Q psy15549 91 PNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE--L-----LASGDDESTIIVWKQKTD 161 (621)
Q Consensus 91 pdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~--~-----l~s~s~dg~i~vwd~~~~ 161 (621)
.+.++|+... .++++-.|+..+ +.+....-|.. |+-+.+.|+.+ . -+.|-.|..|+-||.+-.
T Consensus 343 ~dsnlil~~~~~~~~l~klDIE~G-------KIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~ 414 (644)
T KOG2395|consen 343 ADSNLILMDGGEQDKLYKLDIERG-------KIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQ 414 (644)
T ss_pred cccceEeeCCCCcCcceeeecccc-------eeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEeccccc
Confidence 3445555433 566777777777 66666666655 77788888654 2 234556888999998744
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-EEEeccCCcceEEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN-LGILTEHKKFVQGV 240 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~l 240 (621)
... .+ .|...+.+ .......|++-..+| ++++|+.+|.|++||- .+.. ...+.+...+|..+
T Consensus 415 ~~~-kl-------------~~~q~kqy-~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hV 477 (644)
T KOG2395|consen 415 GKN-KL-------------AVVQSKQY-STKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHV 477 (644)
T ss_pred Ccc-ee-------------eeeecccc-ccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeE
Confidence 321 00 11111111 223456777776666 8999999999999996 4443 34566778899999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcc
Q psy15549 241 AWDPKNQYVATLSSDRSLRTYSIQ 264 (621)
Q Consensus 241 ~~sp~~~~l~s~~~dg~i~iwd~~ 264 (621)
..+.+|++|+.. .+..+.+-++.
T Consensus 478 dvtadGKwil~T-c~tyLlLi~t~ 500 (644)
T KOG2395|consen 478 DVTADGKWILAT-CKTYLLLIDTL 500 (644)
T ss_pred EeeccCcEEEEe-cccEEEEEEEe
Confidence 999999998854 45666666653
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00084 Score=41.28 Aligned_cols=39 Identities=31% Similarity=0.550 Sum_probs=33.9
Q ss_pred CcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy15549 224 GKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYS 262 (621)
Q Consensus 224 ~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd 262 (621)
++++..+..|...|.++.|++++.++++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 345566777888999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.014 Score=62.49 Aligned_cols=145 Identities=8% Similarity=0.048 Sum_probs=93.8
Q ss_pred CCCEEEEEc--CCceEEEEeccCccccccceecccccccCCC-eEEEEECCC-------CCEEEEEeCCCcEEEEEccCC
Q psy15549 92 NGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKA-VNVVRFSPN-------GELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 92 dg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~-V~~i~~sp~-------g~~l~s~s~dg~i~vwd~~~~ 161 (621)
+.++|+... .+.+.-.|+..+ +.+.....|... |..+ .|+ ...-+.|-.+..+..||.+-.
T Consensus 492 d~~mil~~~~~~~~ly~mDLe~G-------KVV~eW~~~~~~~v~~~--~p~~K~aqlt~e~tflGls~n~lfriDpR~~ 562 (794)
T PF08553_consen 492 DRNMILLDPNNPNKLYKMDLERG-------KVVEEWKVHDDIPVVDI--APDSKFAQLTNEQTFLGLSDNSLFRIDPRLS 562 (794)
T ss_pred ccceEeecCCCCCceEEEecCCC-------cEEEEeecCCCcceeEe--cccccccccCCCceEEEECCCceEEeccCCC
Confidence 334444433 456777777776 556666666543 4443 342 234566777888999998854
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 241 (621)
... + .+.. ...........|++-+.+| +||+|+.+|.|++||--..+....+.+-..+|.+|.
T Consensus 563 ~~k--~-------------v~~~-~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iD 625 (794)
T PF08553_consen 563 GNK--L-------------VDSQ-SKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGID 625 (794)
T ss_pred CCc--e-------------eecc-ccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEE
Confidence 311 0 0000 1112345668888888777 799999999999999433333344556788999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEc
Q psy15549 242 WDPKNQYVATLSSDRSLRTYSI 263 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~iwd~ 263 (621)
.+.||+||+..+ +..|.+++.
T Consensus 626 vt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 626 VTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred ecCCCcEEEEee-cceEEEEEE
Confidence 999999988554 556777775
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.03 Score=43.56 Aligned_cols=101 Identities=15% Similarity=0.139 Sum_probs=67.2
Q ss_pred eEEEEECC---CC-CEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEE
Q psy15549 132 VNVVRFSP---NG-ELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL 207 (621)
Q Consensus 132 V~~i~~sp---~g-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l 207 (621)
|+++++.. +| +.|+.|+.|..||+|+-+.- + .. ..-...|++++-... ..+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e~--~---------------------~E-i~e~~~v~~L~~~~~-~~F 56 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDEI--V---------------------AE-ITETDKVTSLCSLGG-GRF 56 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCcE--E---------------------EE-EecccceEEEEEcCC-CEE
Confidence 56666654 33 48999999999999975422 1 11 233456777777665 579
Q ss_pred EEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcC-CC---CEEEEEeCCCcEEE
Q psy15549 208 ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP-KN---QYVATLSSDRSLRT 260 (621)
Q Consensus 208 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp-~~---~~l~s~~~dg~i~i 260 (621)
+.+..+|+|-+|+- ...+...+.... +.++.+.. ++ .-|++|-.+|.|-+
T Consensus 57 ~Y~l~NGTVGvY~~--~~RlWRiKSK~~-~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 57 AYALANGTVGVYDR--SQRLWRIKSKNQ-VTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred EEEecCCEEEEEeC--cceeeeeccCCC-eEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 99999999999975 444555554444 55555543 32 35888888887743
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.055 Score=51.85 Aligned_cols=51 Identities=10% Similarity=0.014 Sum_probs=36.1
Q ss_pred cccceEEEEEcCCCCeEEEEeCCC-cEEEEEecCCcCCcccCCCCCcccccCC
Q psy15549 411 HYTKLTDITWSSDGKVLIASSTDG-YCSIISFGDNEIGIPYVPPSGEESKEND 462 (621)
Q Consensus 411 h~~~v~~~~~spdg~~l~s~s~dg-~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 462 (621)
+.+..-.++...+|.+.+++-.+| .|.+|+.+ |+++..+..+....++..|
T Consensus 211 ~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~F 262 (307)
T COG3386 211 EPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAF 262 (307)
T ss_pred CCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceE
Confidence 345566778888888776554554 89999988 8888888777555555555
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.26 Score=48.45 Aligned_cols=198 Identities=13% Similarity=0.116 Sum_probs=79.4
Q ss_pred CCCEEEEEc--CCceEEEEeccCccccccceeccc--ccccC--CCeEEEEECCCCCEEEEEe--C----CCcEEEEEcc
Q psy15549 92 NGELLASGD--DVGKEIWYLTERESGIANVEFASD--LSRHQ--KAVNVVRFSPNGELLASGD--D----ESTIIVWKQK 159 (621)
Q Consensus 92 dg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~--~~~h~--~~V~~i~~sp~g~~l~s~s--~----dg~i~vwd~~ 159 (621)
+.++|+..+ .+.|.|.|+...-......+.+.. +.... ..-..+-.-|+|+.++++- . -|-+.+.|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 567888877 777899998854332222122211 11100 1222333457888888752 2 2456677766
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe--------------------CCCeEEEE
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS--------------------VDNTAIMW 219 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~--------------------~dg~i~vw 219 (621)
+.+.... |+. -.+....-+.+-|.|..+.++++. ....+.+|
T Consensus 166 tf~v~g~---------------We~---~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vW 227 (461)
T PF05694_consen 166 TFEVKGR---------------WEK---DRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVW 227 (461)
T ss_dssp T--EEEE-----------------S---B-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEE
T ss_pred cccccce---------------ecc---CCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEE
Confidence 5443211 110 011223345677788777777753 24679999
Q ss_pred ECCCCcEEEEeccCC--cceEEEEEcC--CCCE-EEEEeCCCcEEEEEc-cCceee--eecccCCCCCCCcccccccccc
Q psy15549 220 DVHKGKNLGILTEHK--KFVQGVAWDP--KNQY-VATLSSDRSLRTYSI-QSKKVI--SRACRSKLPVDSSHELFDKVVP 291 (621)
Q Consensus 220 d~~~~~~~~~~~~~~--~~v~~l~~sp--~~~~-l~s~~~dg~i~iwd~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 291 (621)
|+.+.+.++++.-.. .....+.|.. +..+ ++.+.-.++|..|-- ..++-. +.+.... ..+.
T Consensus 228 D~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~-----------~~v~ 296 (461)
T PF05694_consen 228 DWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPA-----------KKVE 296 (461)
T ss_dssp ETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE-------------EE--
T ss_pred ECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCC-----------cccC
Confidence 999999999885432 2345667754 4444 333333444444433 333311 1111100 0000
Q ss_pred ccccCC-------cccceeeeeecCCCCeEEecc
Q psy15549 292 LFHDDT-------MKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 292 ~~~~~~-------~~~~i~~~~~spdg~~l~~~s 318 (621)
-+.... ...-|+.+.+|.|.++|++++
T Consensus 297 ~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~ 330 (461)
T PF05694_consen 297 GWILPEMLKPFGAVPPLITDILISLDDRFLYVSN 330 (461)
T ss_dssp SS---GGGGGG-EE------EEE-TTS-EEEEEE
T ss_pred cccccccccccccCCCceEeEEEccCCCEEEEEc
Confidence 111111 244577888888888887765
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.32 Score=47.72 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=39.0
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeE---EEecccccceEEEEEcCCCCeEEEEeCCCcEE
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFA---FIANIHYTKLTDITWSSDGKVLIASSTDGYCS 437 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~ 437 (621)
.+.++++.-..+.|....+..+..+. .+.......+.+|++.|||.++++.+.+|.|.
T Consensus 270 ~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 270 RGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred cCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 45666666667788888887554322 22223445799999999999888888888874
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.5 Score=49.57 Aligned_cols=62 Identities=8% Similarity=0.074 Sum_probs=41.5
Q ss_pred CCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCC
Q psy15549 390 ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPP 453 (621)
Q Consensus 390 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~ 453 (621)
-|.|.-+|+.+++.+-....... ...+. ..-.|..++.++.||.++.+|..+|+.+-.+...
T Consensus 440 ~g~l~AiD~~tGk~~W~~~~~~p-~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g 501 (527)
T TIGR03075 440 MGSLIAWDPITGKIVWEHKEDFP-LWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTG 501 (527)
T ss_pred ceeEEEEeCCCCceeeEecCCCC-CCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence 36777889988887766543211 11111 1224557777888999999999999987766554
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.078 Score=54.26 Aligned_cols=104 Identities=20% Similarity=0.212 Sum_probs=63.4
Q ss_pred eEEEEECCCCCEEEEE-eCC----CeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCC-----------cE
Q psy15549 195 VYDISWSPTSTHLISG-SVD----NTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDR-----------SL 258 (621)
Q Consensus 195 v~~i~~spd~~~l~s~-~~d----g~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg-----------~i 258 (621)
+..+.++|||++||.+ +.. ..|+++|+.+++.+...-. ......+.|.++++.|+....+. .|
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~-~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v 204 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIE-NPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV 204 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEE-EEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccc-ccccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence 4467899999988865 333 4599999999977653211 11223499999998877665433 26
Q ss_pred EEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 259 RTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 259 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
+.|.+.+...-. ..+|...........+..++|+++|+...
T Consensus 205 ~~~~~gt~~~~d-------------------~lvfe~~~~~~~~~~~~~s~d~~~l~i~~ 245 (414)
T PF02897_consen 205 YRHKLGTPQSED-------------------ELVFEEPDEPFWFVSVSRSKDGRYLFISS 245 (414)
T ss_dssp EEEETTS-GGG--------------------EEEEC-TTCTTSEEEEEE-TTSSEEEEEE
T ss_pred EEEECCCChHhC-------------------eeEEeecCCCcEEEEEEecCcccEEEEEE
Confidence 667765543210 11222222222256789999999988766
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0017 Score=39.81 Aligned_cols=36 Identities=39% Similarity=0.624 Sum_probs=31.9
Q ss_pred eeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15549 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWD 220 (621)
Q Consensus 185 ~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd 220 (621)
...+..|...|.++.|++++.++++++.|+.+++|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 5 LKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 355567888999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.036 Score=59.54 Aligned_cols=102 Identities=19% Similarity=0.304 Sum_probs=76.1
Q ss_pred CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q psy15549 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMW 219 (621)
Q Consensus 140 ~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vw 219 (621)
.+..++.|+..|.+...|+...-.. + ..-..-.++|++++|+.+|..++.|-.+|.|.+|
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~--~------------------~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~ 157 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGP--L------------------HQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVW 157 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccch--h------------------hcCCccCCcceeeEecCCCceeccccCCCcEEEE
Confidence 4557899999999998887764210 0 1112345789999999999999999999999999
Q ss_pred ECCCCcEEEEeccCCcceEEEEE---cCCCCEEEEEeCCCcEEEEEc
Q psy15549 220 DVHKGKNLGILTEHKKFVQGVAW---DPKNQYVATLSSDRSLRTYSI 263 (621)
Q Consensus 220 d~~~~~~~~~~~~~~~~v~~l~~---sp~~~~l~s~~~dg~i~iwd~ 263 (621)
|+..++.++.+..|..+.+++-+ ..++..++++...|. +|.+
T Consensus 158 D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 158 DMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred EccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 99999999888777666555433 345566777777775 5654
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.081 Score=51.88 Aligned_cols=197 Identities=12% Similarity=0.154 Sum_probs=84.2
Q ss_pred EccCCCEEEEEc-------CCceEEEEeccCccccccceecccccc---cCCCeEEEEECCCCCEEEEEe----------
Q psy15549 89 FSPNGELLASGD-------DVGKEIWYLTERESGIANVEFASDLSR---HQKAVNVVRFSPNGELLASGD---------- 148 (621)
Q Consensus 89 ~spdg~~las~~-------d~~v~iw~~~~~~~~~~~~~~~~~~~~---h~~~V~~i~~sp~g~~l~s~s---------- 148 (621)
.-|+|++++++- .+++.+.|-++- ........ ....-..+-|.|..+.++|..
T Consensus 137 clp~G~imIS~lGd~~G~g~Ggf~llD~~tf-------~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~G 209 (461)
T PF05694_consen 137 CLPDGRIMISALGDADGNGPGGFVLLDGETF-------EVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKG 209 (461)
T ss_dssp E-SS--EEEEEEEETTS-S--EEEEE-TTT---------EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT-
T ss_pred ecCCccEEEEeccCCCCCCCCcEEEEcCccc-------cccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccC
Confidence 347898888752 234566665532 22221111 123345677788777787753
Q ss_pred ----------CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC--CCCEEEEEe-CCCe
Q psy15549 149 ----------DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP--TSTHLISGS-VDNT 215 (621)
Q Consensus 149 ----------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp--d~~~l~s~~-~dg~ 215 (621)
...++.+||+.+.+.++.+ .+.........+.|.. +..+=++++ ..++
T Consensus 210 f~~~d~~~~~yG~~l~vWD~~~r~~~Q~i-------------------dLg~~g~~pLEvRflH~P~~~~gFvg~aLss~ 270 (461)
T PF05694_consen 210 FNPEDLEAGKYGHSLHVWDWSTRKLLQTI-------------------DLGEEGQMPLEVRFLHDPDANYGFVGCALSSS 270 (461)
T ss_dssp --TTTHHHH-S--EEEEEETTTTEEEEEE-------------------ES-TTEEEEEEEEE-SSTT--EEEEEEE--EE
T ss_pred CChhHhhcccccCeEEEEECCCCcEeeEE-------------------ecCCCCCceEEEEecCCCCccceEEEEeccce
Confidence 2357999999998865333 1111122345566644 444433333 3445
Q ss_pred EEEEEC-CCCc----EEEEeccC-----------------CcceEEEEEcCCCCEEEEEeC-CCcEEEEEccCce---ee
Q psy15549 216 AIMWDV-HKGK----NLGILTEH-----------------KKFVQGVAWDPKNQYVATLSS-DRSLRTYSIQSKK---VI 269 (621)
Q Consensus 216 i~vwd~-~~~~----~~~~~~~~-----------------~~~v~~l~~sp~~~~l~s~~~-dg~i~iwd~~~~~---~~ 269 (621)
|..|-- ..++ .+..+... ..-|+.+..|.|.++|...+. +|.|+.||+..-. ++
T Consensus 271 i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~ 350 (461)
T PF05694_consen 271 IWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLV 350 (461)
T ss_dssp EEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEE
T ss_pred EEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEE
Confidence 555533 3332 22222110 234789999999999987775 8999999997632 22
Q ss_pred eecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 270 SRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
.++..... ......+......+.+....+..|-||+.|++.+
T Consensus 351 gqv~lGG~-------~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 351 GQVFLGGS-------IRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp EEEE-BTT-------TT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred eEEEECcE-------eccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence 22221110 0000111222334455567899999999999876
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.06 Score=41.97 Aligned_cols=101 Identities=14% Similarity=0.160 Sum_probs=60.4
Q ss_pred eEEEeccc---cccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 16 VLSVDIQL---KQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 16 v~~l~~sp---d~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
|++|++.. ||+ +.|++|+.|..|+ +|+-..- ..++. -.+.|.+++-...
T Consensus 2 V~al~~~d~d~dg~----~eLlvGs~D~~IR--------------vf~~~e~---------~~Ei~-e~~~v~~L~~~~~ 53 (111)
T PF14783_consen 2 VTALCLFDFDGDGE----NELLVGSDDFEIR--------------VFKGDEI---------VAEIT-ETDKVTSLCSLGG 53 (111)
T ss_pred eeEEEEEecCCCCc----ceEEEecCCcEEE--------------EEeCCcE---------EEEEe-cccceEEEEEcCC
Confidence 56666554 444 7999999999999 5543211 11222 2456888887777
Q ss_pred CCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECC-C--C-CEEEEEeCCCcEE
Q psy15549 93 GELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-N--G-ELLASGDDESTII 154 (621)
Q Consensus 93 g~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~--g-~~l~s~s~dg~i~ 154 (621)
+++.++-.+++|-+|+-... ....+.. ..++++.+.. + | .-|++|-.+|.|-
T Consensus 54 ~~F~Y~l~NGTVGvY~~~~R---------lWRiKSK-~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 54 GRFAYALANGTVGVYDRSQR---------LWRIKSK-NQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred CEEEEEecCCEEEEEeCcce---------eeeeccC-CCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 66555555888877765322 2222222 2355555543 3 2 2788888888774
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.17 Score=47.49 Aligned_cols=148 Identities=17% Similarity=0.178 Sum_probs=92.6
Q ss_pred cEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEE-cc
Q psy15549 83 AVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWK-QK 159 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd-~~ 159 (621)
.+.+.+++++|+.+|... ++.-.+|-...+.. ....+.+ ..+....|++++...+....+...+++. ..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~------~~~~~~g--~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~ 96 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGP------VRPVLTG--GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSA 96 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCc------ceeeccC--CccccccccCCCCEEEEEcCCCceEEEEecC
Confidence 789999999999888766 77777776665532 1111122 3677889999987777766666677774 22
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe---CCCeEEEEECC---CC------cEE
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS---VDNTAIMWDVH---KG------KNL 227 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~---~dg~i~vwd~~---~~------~~~ 227 (621)
.+..... ......-...|..+.+||||..++... .++.|.+--+. .+ ...
T Consensus 97 ~g~~~~~------------------~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~ 158 (253)
T PF10647_consen 97 SGTGEPV------------------EVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPR 158 (253)
T ss_pred CCcceeE------------------EecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccce
Confidence 3221100 011111112899999999999888765 34677766543 23 111
Q ss_pred EEeccCCcceEEEEEcCCCCEEEEEeCCC
Q psy15549 228 GILTEHKKFVQGVAWDPKNQYVATLSSDR 256 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~~~l~s~~~dg 256 (621)
.........+..+.|.+++.+++.+...+
T Consensus 159 ~~~~~~~~~v~~v~W~~~~~L~V~~~~~~ 187 (253)
T PF10647_consen 159 RVAPPLLSDVTDVAWSDDSTLVVLGRSAG 187 (253)
T ss_pred EecccccCcceeeeecCCCEEEEEeCCCC
Confidence 22223356789999999998777665543
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.021 Score=56.37 Aligned_cols=60 Identities=17% Similarity=0.179 Sum_probs=47.6
Q ss_pred CcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 381 YRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 381 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
+++|++|+.+|.|++||. .+....+...+-..+|..+..+.||++|+..+ +.++.+.++.
T Consensus 441 sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t~ 500 (644)
T KOG2395|consen 441 SGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDTL 500 (644)
T ss_pred CceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEEe
Confidence 478999999999999998 55545554456788999999999999887665 5577777754
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=96.62 E-value=1.1 Score=47.15 Aligned_cols=115 Identities=16% Similarity=0.156 Sum_probs=68.1
Q ss_pred CCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCe-------EEEEECCCCCEEEEEeCC
Q psy15549 141 GELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDV-------YDISWSPTSTHLISGSVD 213 (621)
Q Consensus 141 g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-------~~i~~spd~~~l~s~~~d 213 (621)
+..|+.++.++.|.-.|..+++.+-.+... ........ ..+++. +..++.++.+
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~-----------------~~~~~~~~~~~~~~~rg~av~--~~~v~v~t~d 129 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPK-----------------LPDDVIPVMCCDVVNRGVALY--DGKVFFGTLD 129 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCC-----------------CCcccccccccccccccceEE--CCEEEEEcCC
Confidence 456777777888999999998865433110 00000000 112222 3467778889
Q ss_pred CeEEEEECCCCcEEEEeccCCcc-eEEEEEcC--CCCEEEEEeC------CCcEEEEEccCceeeeeccc
Q psy15549 214 NTAIMWDVHKGKNLGILTEHKKF-VQGVAWDP--KNQYVATLSS------DRSLRTYSIQSKKVISRACR 274 (621)
Q Consensus 214 g~i~vwd~~~~~~~~~~~~~~~~-v~~l~~sp--~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~ 274 (621)
+.|.-+|..+|+.+......... -..+.-+| .+..++++.. +|.|..+|..+|+.+-.+..
T Consensus 130 g~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~ 199 (527)
T TIGR03075 130 ARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYT 199 (527)
T ss_pred CEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccC
Confidence 99999999999988766421110 00111122 1234554432 68999999999998877654
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.86 Score=49.75 Aligned_cols=120 Identities=16% Similarity=0.169 Sum_probs=71.8
Q ss_pred CCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEEC----------------CCC
Q psy15549 141 GELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS----------------PTS 204 (621)
Q Consensus 141 g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s----------------pd~ 204 (621)
+..|+.++.++.|.-.|..+++.+-++......... ..| ..++.+.+. ..+
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~------------~~~-~~cRGvay~~~p~~~~~~~~~~~p~~~~ 260 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAG------------RQH-QTCRGVSYYDAPAAAAGPAAPAAPADCA 260 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccc------------ccc-ccccceEEecCCcccccccccccccccC
Confidence 556777787888888898888876544221110000 000 001111111 134
Q ss_pred CEEEEEeCCCeEEEEECCCCcEEEEeccCCcceE-------------EEEEcC--CCCEEEEEeC----------CCcEE
Q psy15549 205 THLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ-------------GVAWDP--KNQYVATLSS----------DRSLR 259 (621)
Q Consensus 205 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~-------------~l~~sp--~~~~l~s~~~----------dg~i~ 259 (621)
..++.++.|+.|.-.|.++|+.+..+.. .+.|. .+.-.| .+..+++|+. +|.|+
T Consensus 261 ~rV~~~T~Dg~LiALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~ 339 (764)
T TIGR03074 261 RRIILPTSDARLIALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIR 339 (764)
T ss_pred CEEEEecCCCeEEEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEE
Confidence 5788899999999999999998877632 22110 111112 1345666643 68899
Q ss_pred EEEccCceeeeeccc
Q psy15549 260 TYSIQSKKVISRACR 274 (621)
Q Consensus 260 iwd~~~~~~~~~~~~ 274 (621)
-+|+.+|+.+-.+..
T Consensus 340 A~Da~TGkl~W~~~~ 354 (764)
T TIGR03074 340 AFDVNTGALVWAWDP 354 (764)
T ss_pred EEECCCCcEeeEEec
Confidence 999999999887753
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0018 Score=56.69 Aligned_cols=105 Identities=8% Similarity=-0.038 Sum_probs=65.5
Q ss_pred cEEEEEEcCCcEEEEeCCCCceeEEE-ecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCC-Ccccc
Q psy15549 382 RIVIAVATENNILLYDTQHASPFAFI-ANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPS-GEESK 459 (621)
Q Consensus 382 ~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~-~~~~~ 459 (621)
..+++|+.+|.|++|....-...... ..+.......+.--.++.+..+++.||.|+.|++.-++.......|. .....
T Consensus 71 ~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~ 150 (238)
T KOG2444|consen 71 AKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEE 150 (238)
T ss_pred ceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcce
Confidence 56888999999999987632111111 11111222223333455678889999999999999877666655555 33444
Q ss_pred cCCCCCCCCcccC--CCcccHHHhcccCc
Q psy15549 460 ENDPTKGEPVRSE--DKPRSAEQAKGEGK 486 (621)
Q Consensus 460 ~~~~~~~~~~~s~--~~~~~~~~w~~~~~ 486 (621)
......++.++.+ +.+..++.|+++.-
T Consensus 151 ~ivv~sd~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 151 LIVVGSDEFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred eEEecCCceEEeeccccchhhhhcchhhh
Confidence 4444555555555 77888888886544
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.61 Score=43.19 Aligned_cols=211 Identities=12% Similarity=0.124 Sum_probs=114.4
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
++..-+. .|.++.|+|+.+ .|++......-. ||=-..++.... ..+.+ -..--.
T Consensus 80 pi~g~~~-nvS~LTynp~~r-----tLFav~n~p~~i--------------VElt~~Gdlirt-----iPL~g-~~DpE~ 133 (316)
T COG3204 80 PILGETA-NVSSLTYNPDTR-----TLFAVTNKPAAI--------------VELTKEGDLIRT-----IPLTG-FSDPET 133 (316)
T ss_pred ccccccc-cccceeeCCCcc-----eEEEecCCCceE--------------EEEecCCceEEE-----ecccc-cCChhH
Confidence 3444454 499999999998 555555444443 554444443221 11222 122345
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccc--cce-ecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIA--NVE-FASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~--~~~-~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
+++..+|++.++-- +..+.++.+........ ..+ .+..........-.++|.|....|+.+-+-.-+.||.+....
T Consensus 134 Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~ 213 (316)
T COG3204 134 IEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSP 213 (316)
T ss_pred eEEecCCEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCC
Confidence 67777787777766 66777777665532111 101 111111225567789999988888888888778888776433
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEeccCCc------
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKNLGILTEHKK------ 235 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~------ 235 (621)
..-..+... . ......-.-..|.++.|++ .+.+|+.+.+++.+...|. .|..+..+..+.+
T Consensus 214 ~~l~~~~~~---~--------~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~-~G~~~~~lsL~~g~~gL~~ 281 (316)
T COG3204 214 SSLSVHASL---D--------PTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDL-SGEVIELLSLTKGNHGLSS 281 (316)
T ss_pred ccccccccc---C--------cccccceEeeccccceecCCCCcEEEEecCCceEEEEec-CCCeeeeEEeccCCCCCcc
Confidence 111110000 0 0000011124577888887 4566777777888888886 4554444422211
Q ss_pred ---ceEEEEEcCCCCEEEEEeCCC
Q psy15549 236 ---FVQGVAWDPKNQYVATLSSDR 256 (621)
Q Consensus 236 ---~v~~l~~sp~~~~l~s~~~dg 256 (621)
....++..++|...+ .|+-+
T Consensus 282 dipqaEGiamDd~g~lYI-vSEPn 304 (316)
T COG3204 282 DIPQAEGIAMDDDGNLYI-VSEPN 304 (316)
T ss_pred cCCCcceeEECCCCCEEE-EecCC
Confidence 234566666665333 34433
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.77 Score=43.88 Aligned_cols=183 Identities=15% Similarity=0.183 Sum_probs=89.4
Q ss_pred EEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 85 NVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 85 ~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
..+....++..++++..+ .||....++... ......-.+.+..+.-+++|++++++.......-||--...
T Consensus 107 ~~i~~l~~~~~~l~~~~G--~iy~T~DgG~tW-----~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~-- 177 (302)
T PF14870_consen 107 FGITALGDGSAELAGDRG--AIYRTTDGGKTW-----QAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTT-- 177 (302)
T ss_dssp EEEEEEETTEEEEEETT----EEEESSTTSSE-----EEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS--
T ss_pred eEEEEcCCCcEEEEcCCC--cEEEeCCCCCCe-----eEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCcc--
Confidence 334444445444444443 355555554321 22223444778889999999999888766666677643221
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEEC-CCCcEEEE----eccCCcceEE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDV-HKGKNLGI----LTEHKKFVQG 239 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~-~~~~~~~~----~~~~~~~v~~ 239 (621)
|. .........|..|.|.|++.+.+.+ ..|.|+.=+. ...+.-.. +....-.+..
T Consensus 178 -----------------w~--~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld 237 (302)
T PF14870_consen 178 -----------------WQ--PHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILD 237 (302)
T ss_dssp ------------------E--EEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEE
T ss_pred -----------------ce--EEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEE
Confidence 11 1223356789999999998776654 7888888772 12211111 1122334789
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 240 VAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 240 l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
++|.+++...++|+ .|.+ +.....|+.=+... ........+..+.|.++.+-++.+.
T Consensus 238 ~a~~~~~~~wa~gg-~G~l-~~S~DgGktW~~~~--------------------~~~~~~~n~~~i~f~~~~~gf~lG~ 294 (302)
T PF14870_consen 238 LAYRPPNEIWAVGG-SGTL-LVSTDGGKTWQKDR--------------------VGENVPSNLYRIVFVNPDKGFVLGQ 294 (302)
T ss_dssp EEESSSS-EEEEES-TT-E-EEESSTTSS-EE-G--------------------GGTTSSS---EEEEEETTEEEEE-S
T ss_pred EEecCCCCEEEEeC-CccE-EEeCCCCccceECc--------------------cccCCCCceEEEEEcCCCceEEECC
Confidence 99999888777665 4443 44444444322211 1112334457888887777777664
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.85 Score=43.59 Aligned_cols=73 Identities=12% Similarity=0.112 Sum_probs=43.1
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy15549 189 RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYS 262 (621)
Q Consensus 189 ~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd 262 (621)
..-.+.+..+.-++||.+++++.......-||-....-...-+.-...|..|.|.|++...+.+ ..|.|+.=+
T Consensus 141 ~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 141 SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp -S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 4555779999999999999888766666778754322222223356789999999998876644 888888777
|
|
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.53 Score=43.86 Aligned_cols=229 Identities=9% Similarity=0.102 Sum_probs=120.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECC------CCc-EEEEecc-----CCcceEEEEEcCCCC------------E
Q psy15549 193 EDVYDISWSPTSTHLISGSVDNTAIMWDVH------KGK-NLGILTE-----HKKFVQGVAWDPKNQ------------Y 248 (621)
Q Consensus 193 ~~v~~i~~spd~~~l~s~~~dg~i~vwd~~------~~~-~~~~~~~-----~~~~v~~l~~sp~~~------------~ 248 (621)
..-+.|+++|.+.+-++....+...+||.. ..+ .+.++.. .....+.+.|+.... .
T Consensus 23 ~N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~ 102 (336)
T TIGR03118 23 RNAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR 102 (336)
T ss_pred cccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence 345789999999888877778999999986 122 2333321 234567777775332 2
Q ss_pred EEEEeCCCcEEEEEccCcee---eeecccCCCCCCCccccccccccccccCCcccceeeeeecCC--CCeEEeccccccC
Q psy15549 249 VATLSSDRSLRTYSIQSKKV---ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD--GQLLIAPSGCLEN 323 (621)
Q Consensus 249 l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd--g~~l~~~s~~~~~ 323 (621)
++.+++||+|.-|...-... ...+ ++...........+++... +.+|+.+.-
T Consensus 103 Fif~tEdGTisaW~p~v~~t~~~~~~~-------------------~~d~s~~gavYkGLAi~~~~~~~~LYaadF---- 159 (336)
T TIGR03118 103 FLFVTEDGTLSGWAPALGTTRMTRAEI-------------------VVDASQQGNVYKGLAVGPTGGGDYLYAANF---- 159 (336)
T ss_pred EEEEeCCceEEeecCcCCcccccccEE-------------------EEccCCCcceeeeeEEeecCCCceEEEecc----
Confidence 67788999999998532221 0000 0000111122345565543 567766542
Q ss_pred CCCCCcceeeeeeeee--cccCCCceecCCcccceeeeeccceeeecCCCCC---CCCccCCCcEEEEEEcCCcEEEEeC
Q psy15549 324 SDSTRKPISVTHVFTR--ACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDD---KPLFKLPYRIVIAVATENNILLYDT 398 (621)
Q Consensus 324 ~d~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~dg~i~iwd~ 398 (621)
..++|.+++-...... ..+..+ ..-..|.|.....-.... ...-..+...=+.+..-|.|-+||+
T Consensus 160 ~~g~IDVFd~~f~~~~~~g~F~DP----------~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~ 229 (336)
T TIGR03118 160 RQGRIDVFKGSFRPPPLPGSFIDP----------ALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL 229 (336)
T ss_pred CCCceEEecCccccccCCCCccCC----------CCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcC
Confidence 4566666654321100 000000 001111111000000000 0000001111223334468889997
Q ss_pred CCCceeEEE-ecccccceEEEEEcC------CCCeEEEEeCCCcEEEEEecCCcCCcccCCCCC
Q psy15549 399 QHASPFAFI-ANIHYTKLTDITWSS------DGKVLIASSTDGYCSIISFGDNEIGIPYVPPSG 455 (621)
Q Consensus 399 ~~~~~~~~~-~~~h~~~v~~~~~sp------dg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~ 455 (621)
... .++++ ..+.-...+.|+..| .|.+|+---.||+|..||..+++.+..+....+
T Consensus 230 ~G~-l~~r~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G 292 (336)
T TIGR03118 230 NGQ-LLRRVASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDN 292 (336)
T ss_pred CCc-EEEEeccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCC
Confidence 654 44444 335556677888766 466777666799999999999988777766443
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.013 Score=37.89 Aligned_cols=36 Identities=19% Similarity=0.394 Sum_probs=31.1
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Q psy15549 191 HLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL 227 (621)
Q Consensus 191 ~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~ 227 (621)
....|.+++|+|...+||.++.+|.|.+|.+ +++.+
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qri 45 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQRI 45 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcCc
Confidence 3456999999999999999999999999998 55543
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=96.41 E-value=1.1 Score=48.56 Aligned_cols=76 Identities=25% Similarity=0.369 Sum_probs=53.6
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEECCC---------CcE--E-EEe--------ccCCcceEEEEEcCC---CCE
Q psy15549 192 LEDVYDISWSPTSTHLISGSVDNTAIMWDVHK---------GKN--L-GIL--------TEHKKFVQGVAWDPK---NQY 248 (621)
Q Consensus 192 ~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~---------~~~--~-~~~--------~~~~~~v~~l~~sp~---~~~ 248 (621)
.-.|..|.++|+|.+|+..+..|.+.+.=.+. |+. . +++ ..+...|..+.|+|. +..
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 35789999999999999988876544432211 111 1 111 134457899999996 588
Q ss_pred EEEEeCCCcEEEEEccCce
Q psy15549 249 VATLSSDRSLRTYSIQSKK 267 (621)
Q Consensus 249 l~s~~~dg~i~iwd~~~~~ 267 (621)
|++-..|+++|+||+....
T Consensus 164 l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred EEEEecCCEEEEEecCCCC
Confidence 9999999999999997543
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.013 Score=37.84 Aligned_cols=34 Identities=9% Similarity=0.300 Sum_probs=29.8
Q ss_pred cccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 411 HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 411 h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
....|..++|+|...+||.++.+|.|.++++ +++
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q 43 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ 43 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence 3457999999999999999999999999999 443
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.29 Score=48.04 Aligned_cols=147 Identities=11% Similarity=0.137 Sum_probs=89.3
Q ss_pred CCEEEEEc----------C-CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 93 GELLASGD----------D-VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 93 g~~las~~----------d-~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
..+|+.|. . |.+.++.+.........++.+... ...++|++++-- ++ +|+.+. .+.|.+|++...
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~-~~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~ 117 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHST-EVKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNS 117 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEE-EESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETT
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEE-eecCcceEhhhh-CC-EEEEee-cCEEEEEEccCc
Confidence 46777663 1 568888888742111223333332 346789888766 44 444444 478999999888
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-CcEEEEec--cCCcceE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK-GKNLGILT--EHKKFVQ 238 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~-~~~~~~~~--~~~~~v~ 238 (621)
+.+ ...........+.++... ++++++|+....+.++.... ...+..+. .....++
T Consensus 118 ~~l-------------------~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~ 176 (321)
T PF03178_consen 118 KTL-------------------LKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVT 176 (321)
T ss_dssp SSE-------------------EEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEE
T ss_pred ccc-------------------hhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEE
Confidence 721 112222233366777665 55999999888888875543 33233332 2345688
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQ 264 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~ 264 (621)
++.|-++++.++.+..+|.+.++...
T Consensus 177 ~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 177 AAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred EEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 88888777789999999999999875
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.35 Score=44.54 Aligned_cols=197 Identities=12% Similarity=0.081 Sum_probs=109.1
Q ss_pred CcEEEEEEccCCCEEEEEc-C--CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy15549 82 KAVNVVRFSPNGELLASGD-D--VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~ 158 (621)
.-...+.|..+|.++-+.+ - ..++.+++.++.. .....+.. .----.++.. ++++..-.-.++...+||.
T Consensus 45 aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~-----~~~~~l~~-~~FgEGit~~-~d~l~qLTWk~~~~f~yd~ 117 (264)
T PF05096_consen 45 AFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKV-----LQSVPLPP-RYFGEGITIL-GDKLYQLTWKEGTGFVYDP 117 (264)
T ss_dssp -EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSE-----EEEEE-TT-T--EEEEEEE-TTEEEEEESSSSEEEEEET
T ss_pred ccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcE-----EEEEECCc-cccceeEEEE-CCEEEEEEecCCeEEEEcc
Confidence 3456788888888887776 3 3478888887631 11111211 1111122332 3344455567889999999
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC--C--
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH--K-- 234 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~-- 234 (621)
.+-+.+..+ . ..+.=+.++ .|++.|+.+.....|+++|..+.+....+.-. .
T Consensus 118 ~tl~~~~~~---------------------~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~p 173 (264)
T PF05096_consen 118 NTLKKIGTF---------------------P-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRP 173 (264)
T ss_dssp TTTEEEEEE---------------------E--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE
T ss_pred ccceEEEEE---------------------e-cCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEE
Confidence 877654222 1 123445666 46778888887889999999988877666432 2
Q ss_pred -cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 235 -KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 235 -~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
..+..+.|- +|...|=.=....|...|..+|+....+....... ...............+.+|+.|....
T Consensus 174 v~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~--------~~~~~~~~~~~~dVLNGIAyd~~~~~ 244 (264)
T PF05096_consen 174 VSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRP--------EVGRDKSRQPDDDVLNGIAYDPETDR 244 (264)
T ss_dssp ---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHH--------HHTSTTST--TTS-EEEEEEETTTTE
T ss_pred CCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhh--------cccccccccccCCeeEeEeEeCCCCE
Confidence 235567775 56555545456678888999998877664221100 00000000111345689999998887
Q ss_pred EEecc
Q psy15549 314 LIAPS 318 (621)
Q Consensus 314 l~~~s 318 (621)
|.+.+
T Consensus 245 l~vTG 249 (264)
T PF05096_consen 245 LFVTG 249 (264)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77766
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.83 Score=48.48 Aligned_cols=60 Identities=13% Similarity=0.130 Sum_probs=34.2
Q ss_pred cEEEEeCCC-Cc--eeEEEecccccceEEEEEcCCCCeEEEEeCCC--cEEEEEecCCcCCcccCCCC
Q psy15549 392 NILLYDTQH-AS--PFAFIANIHYTKLTDITWSSDGKVLIASSTDG--YCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 392 ~i~iwd~~~-~~--~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg--~i~iw~~~~~~~~~~~~~~~ 454 (621)
.+..||..+ .+ .+..+.. .......+++ +|+..++|+.|| .+..||..+.+-...-..|+
T Consensus 481 ~ve~Ydp~~~~~W~~~~~m~~-~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~~ 545 (557)
T PHA02713 481 CIFRYNTNTYNGWELITTTES-RLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHICHQHS 545 (557)
T ss_pred eEEEecCCCCCCeeEccccCc-ccccceeEEE--CCEEEEEeeecceeehhhcCcccccccchhhhcC
Confidence 467888886 33 2222211 1112222223 788899999888 67778877766544444443
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.55 Score=41.74 Aligned_cols=101 Identities=8% Similarity=-0.045 Sum_probs=64.5
Q ss_pred eEEEEECCCCCEEE-EEeCCCcEEEEE--ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE
Q psy15549 132 VNVVRFSPNGELLA-SGDDESTIIVWK--QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 132 V~~i~~sp~g~~l~-s~s~dg~i~vwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~ 208 (621)
-+.++|+.+.+.+. +-+.+-+|.-|| ..++.....- ..+.+........-..-.+++..+|++.+
T Consensus 160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~------------~i~dlrk~~~~e~~~PDGm~ID~eG~L~V 227 (310)
T KOG4499|consen 160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRK------------VIFDLRKSQPFESLEPDGMTIDTEGNLYV 227 (310)
T ss_pred CccccccccCcEEEEEccCceEEeeeecCCCcccccCcc------------eeEEeccCCCcCCCCCCcceEccCCcEEE
Confidence 35688987776554 455677787787 5555432110 00000010000011112344466888888
Q ss_pred EEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcC
Q psy15549 209 SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244 (621)
Q Consensus 209 s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp 244 (621)
+.-..++|...|..+|+.+..+.-....|++++|--
T Consensus 228 a~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 228 ATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred EEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence 888899999999999999999988899999999973
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.031 Score=49.25 Aligned_cols=105 Identities=15% Similarity=0.211 Sum_probs=65.8
Q ss_pred CCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEE-EEECCCCCEEEEEeCCCeEEEE
Q psy15549 141 GELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYD-ISWSPTSTHLISGSVDNTAIMW 219 (621)
Q Consensus 141 g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-i~~spd~~~l~s~~~dg~i~vw 219 (621)
+..+++|+.+|.|.+|......... .....-...|.+ |.--.++.+..+++.+|.|+.|
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~--------------------d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~ 129 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHS--------------------DRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRAC 129 (238)
T ss_pred CceEEeecccceEEEecCCccchHH--------------------HhhhcccccceeccccccccceeEEeccCCceeee
Confidence 4578899999999999876333221 111112222322 3333356688899999999999
Q ss_pred ECCCCcEEEEeccCC-cceEEEEEcCCCCEEEEE--eCCCcEEEEEccC
Q psy15549 220 DVHKGKNLGILTEHK-KFVQGVAWDPKNQYVATL--SSDRSLRTYSIQS 265 (621)
Q Consensus 220 d~~~~~~~~~~~~~~-~~v~~l~~sp~~~~l~s~--~~dg~i~iwd~~~ 265 (621)
++.-.+.+.....|. .++..+..+..+++++++ |.|..++.|++..
T Consensus 130 n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 130 NIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 998888777776666 444444444455555555 5566666666543
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.88 E-value=1.6 Score=41.00 Aligned_cols=155 Identities=17% Similarity=0.187 Sum_probs=87.8
Q ss_pred CeEEEeccccccCCcceEEEEec-CCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGG-ADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~-~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
.+.+.++++|++ .+|... .++.-. +|-...+..... .+. ...+....|++++
T Consensus 25 ~~~s~AvS~dg~-----~~A~v~~~~~~~~--------------L~~~~~~~~~~~------~~~--g~~l~~PS~d~~g 77 (253)
T PF10647_consen 25 DVTSPAVSPDGS-----RVAAVSEGDGGRS--------------LYVGPAGGPVRP------VLT--GGSLTRPSWDPDG 77 (253)
T ss_pred cccceEECCCCC-----eEEEEEEcCCCCE--------------EEEEcCCCccee------ecc--CCccccccccCCC
Confidence 689999999998 665544 233333 333333322211 012 2367888999998
Q ss_pred CEEEEEc-CCceEEEEe-ccCccccccceecccccccCCCeEEEEECCCCCEEEEEe---CCCcEEEEEccCCCCC--CC
Q psy15549 94 ELLASGD-DVGKEIWYL-TERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD---DESTIIVWKQKTDQDL--PE 166 (621)
Q Consensus 94 ~~las~~-d~~v~iw~~-~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s---~dg~i~vwd~~~~~~~--~~ 166 (621)
...+... +...+++.. ..+... ........-...|..+++||||..+|... .++.|.+--+.....- ..
T Consensus 78 ~~W~v~~~~~~~~~~~~~~~g~~~----~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~ 153 (253)
T PF10647_consen 78 WVWTVDDGSGGVRVVRDSASGTGE----PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRR 153 (253)
T ss_pred CEEEEEcCCCceEEEEecCCCcce----eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcce
Confidence 8777766 555566642 222111 11111111112899999999999877655 3567777655433221 00
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg 214 (621)
+. ............+..++|.+++.+++.+...+
T Consensus 154 l~--------------~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~ 187 (253)
T PF10647_consen 154 LT--------------GPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAG 187 (253)
T ss_pred ec--------------cceEecccccCcceeeeecCCCEEEEEeCCCC
Confidence 00 01122233456899999999998777766543
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.61 Score=42.82 Aligned_cols=194 Identities=13% Similarity=0.108 Sum_probs=105.0
Q ss_pred eccccccCCcceEEEEecC-----CceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 20 DIQLKQEKDNCYRIVTGGA-----DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 20 ~~spd~~~~~~~~l~tg~~-----dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
.|||||+ +|...-. -|.|- |||...+-. -+.++..|.-.-..+.|.+||+
T Consensus 120 vfs~dG~-----~LYATEndfd~~rGViG--------------vYd~r~~fq------rvgE~~t~GiGpHev~lm~DGr 174 (366)
T COG3490 120 VFSPDGR-----LLYATENDFDPNRGVIG--------------VYDAREGFQ------RVGEFSTHGIGPHEVTLMADGR 174 (366)
T ss_pred ccCCCCc-----EEEeecCCCCCCCceEE--------------EEecccccc------eecccccCCcCcceeEEecCCc
Confidence 5899997 6655432 36677 777764322 2345777887888899999999
Q ss_pred EEEEEcCCceE--------------------EEEeccCccccccceeccccc--ccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 95 LLASGDDVGKE--------------------IWYLTERESGIANVEFASDLS--RHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 95 ~las~~d~~v~--------------------iw~~~~~~~~~~~~~~~~~~~--~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
.|+.+.. +|. +.+..++. +.....+. .+.-.|..++..+||..++-|-..|.
T Consensus 175 tlvvanG-GIethpdfgR~~lNldsMePSlvlld~atG~-----liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~ 248 (366)
T COG3490 175 TLVVANG-GIETHPDFGRTELNLDSMEPSLVLLDAATGN-----LIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGP 248 (366)
T ss_pred EEEEeCC-ceecccccCccccchhhcCccEEEEeccccc-----hhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCC
Confidence 9987642 222 22211220 11111222 34456788888888876655533221
Q ss_pred -----EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCcE
Q psy15549 153 -----IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVHKGKN 226 (621)
Q Consensus 153 -----i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~~~~~ 226 (621)
-.|=....++.+.-+... ..........|-+|+.+.+..+++.. -..+...+||..+|..
T Consensus 249 ~~d~ppLvg~~~~g~~l~~~~~p--------------ee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~v 314 (366)
T COG3490 249 RNDLPPLVGHFRKGEPLEFLDLP--------------EEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAV 314 (366)
T ss_pred CccCCcceeeccCCCcCcccCCC--------------HHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcE
Confidence 111111222222111000 01112334567788888755555544 4456778999999987
Q ss_pred EEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy15549 227 LGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYS 262 (621)
Q Consensus 227 ~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd 262 (621)
+..-.-. ....++ +...-|++.+.+|.+..+.
T Consensus 315 v~~a~l~--daaGva--~~~~gf~vssg~G~~~~~s 346 (366)
T COG3490 315 VSEAALP--DAAGVA--AAKGGFAVSSGQGRIIFYS 346 (366)
T ss_pred Eeccccc--ccccce--eccCceEEecCCceEEecc
Confidence 6543221 122233 2334466677788888774
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.036 Score=59.54 Aligned_cols=101 Identities=18% Similarity=0.269 Sum_probs=68.5
Q ss_pred CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 92 NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 92 dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
.+.+++.|+ .+.+...|+... +.+...-..-.++|++++|+.+|.+++.|-.+|.|.+||+..++..+.
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~n------L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~---- 167 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGN------LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKV---- 167 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcc------cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceee----
Confidence 456677777 455666666543 122233334567999999999999999999999999999999886533
Q ss_pred CcccccccccceeeeeeecCCCCC---eEEEEECCCCCEEEEEeCCCeEEEEEC
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLED---VYDISWSPTSTHLISGSVDNTAIMWDV 221 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~---v~~i~~spd~~~l~s~~~dg~i~vwd~ 221 (621)
+..|..+ |..+.+..++..++++...|. +|.+
T Consensus 168 -----------------i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 168 -----------------ITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred -----------------eeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 3333333 344445556667888887776 5544
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=95.78 E-value=2.2 Score=41.90 Aligned_cols=112 Identities=14% Similarity=0.197 Sum_probs=54.4
Q ss_pred eEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeec-cccccccCcEEEEEEccC--
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFA-SDLSRHQKAVNVVRFSPN-- 92 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~-~~~~~h~~~V~~l~~spd-- 92 (621)
-++|+|.|||+ +|++ ...|.|+ +++ ..+.. ...+... ............++++|+
T Consensus 4 P~~~a~~pdG~-----l~v~-e~~G~i~--------------~~~-~~g~~-~~~v~~~~~v~~~~~~gllgia~~p~f~ 61 (331)
T PF07995_consen 4 PRSMAFLPDGR-----LLVA-ERSGRIW--------------VVD-KDGSL-KTPVADLPEVFADGERGLLGIAFHPDFA 61 (331)
T ss_dssp EEEEEEETTSC-----EEEE-ETTTEEE--------------EEE-TTTEE-CEEEEE-TTTBTSTTBSEEEEEE-TTCC
T ss_pred ceEEEEeCCCc-----EEEE-eCCceEE--------------EEe-CCCcC-cceecccccccccccCCcccceeccccC
Confidence 47899999996 6554 5599998 555 22221 1111111 123445668899999994
Q ss_pred --CCEEEEEc-C--------CceEEEEeccCccccccce-eccccc---ccCCCeEEEEECCCCCEEEEEeC
Q psy15549 93 --GELLASGD-D--------VGKEIWYLTERESGIANVE-FASDLS---RHQKAVNVVRFSPNGELLASGDD 149 (621)
Q Consensus 93 --g~~las~~-d--------~~v~iw~~~~~~~~~~~~~-~~~~~~---~h~~~V~~i~~sp~g~~l~s~s~ 149 (621)
+.+.++.+ . ..|.-|............+ .+..+. .....-..|.|.|||.+.++.+.
T Consensus 62 ~n~~lYv~~t~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~ 133 (331)
T PF07995_consen 62 SNGYLYVYYTNADEDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGD 133 (331)
T ss_dssp CC-EEEEEEEEE-TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-
T ss_pred CCCEEEEEEEcccCCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCC
Confidence 44333333 1 1233344433311111111 111111 12334567999999976666554
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=95.67 E-value=1.5 Score=39.15 Aligned_cols=43 Identities=9% Similarity=0.045 Sum_probs=36.0
Q ss_pred CCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcC
Q psy15549 379 LPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSS 422 (621)
Q Consensus 379 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp 422 (621)
..|...+++-+.++|...|..+|+.+..+.- ....|+++||--
T Consensus 221 ~eG~L~Va~~ng~~V~~~dp~tGK~L~eikl-Pt~qitsccFgG 263 (310)
T KOG4499|consen 221 TEGNLYVATFNGGTVQKVDPTTGKILLEIKL-PTPQITSCCFGG 263 (310)
T ss_pred cCCcEEEEEecCcEEEEECCCCCcEEEEEEc-CCCceEEEEecC
Confidence 3567778888899999999999999998854 578899999953
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=2.7 Score=41.38 Aligned_cols=65 Identities=12% Similarity=0.183 Sum_probs=40.4
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEE-EECCCCcEEEE-eccCCcceEEEEEcCCCCEEEEEeCCCcEE
Q psy15549 192 LEDVYDISWSPTSTHLISGSVDNTAIM-WDVHKGKNLGI-LTEHKKFVQGVAWDPKNQYVATLSSDRSLR 259 (621)
Q Consensus 192 ~~~v~~i~~spd~~~l~s~~~dg~i~v-wd~~~~~~~~~-~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~ 259 (621)
...+..+.+.|++.+++++. .|.+.. ++- .++.-.. ...-...++++.+.++++.++++ ..|.++
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~~-gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~ 238 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWEP-GQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIR 238 (334)
T ss_pred cceEEEEEECCCCeEEEEeC-CceEEEEcCC-CCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEE
Confidence 45788999999987666655 554443 221 2222222 22344678899999998876654 567654
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.52 Score=50.00 Aligned_cols=64 Identities=3% Similarity=0.055 Sum_probs=38.5
Q ss_pred CCCEEEEEeCC------CeEEEEECCC-Cc--EEEEeccCCcceEEEEEcCCCCEEEEEeCCC--cEEEEEccCcee
Q psy15549 203 TSTHLISGSVD------NTAIMWDVHK-GK--NLGILTEHKKFVQGVAWDPKNQYVATLSSDR--SLRTYSIQSKKV 268 (621)
Q Consensus 203 d~~~l~s~~~d------g~i~vwd~~~-~~--~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg--~i~iwd~~~~~~ 268 (621)
+++..+.|+.+ ..+..||..+ .+ .+..+.........+.+ +|+..++|+.+| .+..||..+.+-
T Consensus 463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W 537 (557)
T PHA02713 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEW 537 (557)
T ss_pred CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCcccccc
Confidence 46667777654 2467899886 33 23333322222323333 578888899888 677888777653
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.49 Score=48.07 Aligned_cols=125 Identities=13% Similarity=0.157 Sum_probs=74.8
Q ss_pred ccccCcEEEEEEccCC-----CEEEEEcCCceEEEEeccCccccccceeccccc-ccCC--CeEEEEECCCCCEEEEEeC
Q psy15549 78 SRHQKAVNVVRFSPNG-----ELLASGDDVGKEIWYLTERESGIANVEFASDLS-RHQK--AVNVVRFSPNGELLASGDD 149 (621)
Q Consensus 78 ~~h~~~V~~l~~spdg-----~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~--~V~~i~~sp~g~~l~s~s~ 149 (621)
-|.-..|..+.|.|-+ .+||+-....|.||.+.....+...+...++.. +... --..+.|+|....|+.-..
T Consensus 53 iGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~ 132 (671)
T PF15390_consen 53 IGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTA 132 (671)
T ss_pred eeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEec
Confidence 3445679999999943 577777799999999874322211111111110 0011 1235779998887776555
Q ss_pred CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-CeEEEEECC
Q psy15549 150 ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD-NTAIMWDVH 222 (621)
Q Consensus 150 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d-g~i~vwd~~ 222 (621)
...-.++++...... .+.-....+-|.|.+|.+||++|+++-.. =.-++||-.
T Consensus 133 ~dvSV~~sV~~d~sr--------------------VkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 133 RDVSVLPSVHCDSSR--------------------VKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred CceeEeeeeeeCCce--------------------EEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 444345555544321 12222456779999999999988776433 345788854
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.3 Score=53.21 Aligned_cols=149 Identities=11% Similarity=0.030 Sum_probs=92.2
Q ss_pred CcEEEEEEccCCCEEEEEc-CC--ceEEEEeccCcccc----ccceecccccccCCCeEEEEECCCC-CEEEEEeCCCcE
Q psy15549 82 KAVNVVRFSPNGELLASGD-DV--GKEIWYLTERESGI----ANVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDESTI 153 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~--~v~iw~~~~~~~~~----~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg~i 153 (621)
-.|..+...+|++..++.. .+ -|..||+..-.... ..+..............++.|+|.- ...+.+..|+.|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl 180 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL 180 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence 3566666778888776654 33 36777776532211 0111111112223345678898843 245677788999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc-
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE- 232 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~- 232 (621)
++..+...... ..-.......+|++|+|.|+.++.|-..|++.-|-. .++....+..
T Consensus 181 ~V~~~~~~~~~---------------------v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P-~leik~~ip~P 238 (1405)
T KOG3630|consen 181 RVKSTKQLAQN---------------------VTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP-SLEIKSEIPEP 238 (1405)
T ss_pred hhhhhhhhhhh---------------------hcccCcccceeeEEeccccceeeEecCCCeEEEeec-ccceeecccCC
Confidence 98876544321 011234567899999999999999999999998865 3443333321
Q ss_pred ---CCcceEEEEEcCCCCEEEEE
Q psy15549 233 ---HKKFVQGVAWDPKNQYVATL 252 (621)
Q Consensus 233 ---~~~~v~~l~~sp~~~~l~s~ 252 (621)
....|.+|+|-....++++-
T Consensus 239 p~~e~yrvl~v~Wl~t~eflvvy 261 (1405)
T KOG3630|consen 239 PVEENYRVLSVTWLSTQEFLVVY 261 (1405)
T ss_pred CcCCCcceeEEEEecceeEEEEe
Confidence 24679999998777776654
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=95.28 E-value=3.1 Score=44.18 Aligned_cols=147 Identities=14% Similarity=0.109 Sum_probs=76.9
Q ss_pred CCCEEEEEc-C------CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC-C-----cEEEEEc
Q psy15549 92 NGELLASGD-D------VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE-S-----TIIVWKQ 158 (621)
Q Consensus 92 dg~~las~~-d------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d-g-----~i~vwd~ 158 (621)
.+.+++.|+ . ..+..+|...+.. .....+..... -.+++.. ++...++||.| | ++..||.
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w-----~~~a~m~~~r~-~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~ 356 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEW-----SSLAPMPSPRC-RVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDP 356 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcE-----eecCCCCcccc-cccEEEE-CCEEEEEccccCCCcccceEEEecC
Confidence 455666666 3 2356777766532 33333332222 2334443 45788888888 3 4667777
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCe-----EEEEECCCCcEEEE--ec
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNT-----AIMWDVHKGKNLGI--LT 231 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~-----i~vwd~~~~~~~~~--~~ 231 (621)
.+++- .....+...........+ +|...|+|+.||. +-.||..+.+--.. +.
T Consensus 357 ~~~~W-------------------~~~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~ 415 (571)
T KOG4441|consen 357 RTNQW-------------------TPVAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPML 415 (571)
T ss_pred CCCce-------------------eccCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCcccccCCCC
Confidence 66652 222222222222222222 6788888998864 66777765432211 11
Q ss_pred cCCcceEEEEEcCCCCEEEEEeCCC------cEEEEEccCcee
Q psy15549 232 EHKKFVQGVAWDPKNQYVATLSSDR------SLRTYSIQSKKV 268 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~~l~s~~~dg------~i~iwd~~~~~~ 268 (621)
........+. -+|...++||.++ ++..||..+.+-
T Consensus 416 ~~r~~~gv~~--~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W 456 (571)
T KOG4441|consen 416 TRRSGHGVAV--LGGKLYIIGGGDGSSNCLNSVECYDPETNTW 456 (571)
T ss_pred cceeeeEEEE--ECCEEEEEcCcCCCccccceEEEEcCCCCce
Confidence 1111121222 3477777887654 577888877653
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.33 Score=49.21 Aligned_cols=120 Identities=21% Similarity=0.330 Sum_probs=72.5
Q ss_pred CCCCCeEEEEECCC----CCEEEEEeCCCeEEEEECCC-----CcEEEEecc-C--Cc--ceEEEEEcCCCCEEEEEeCC
Q psy15549 190 GHLEDVYDISWSPT----STHLISGSVDNTAIMWDVHK-----GKNLGILTE-H--KK--FVQGVAWDPKNQYVATLSSD 255 (621)
Q Consensus 190 ~~~~~v~~i~~spd----~~~l~s~~~dg~i~vwd~~~-----~~~~~~~~~-~--~~--~v~~l~~sp~~~~l~s~~~d 255 (621)
+.-..|..+.|.|- -..|++.-....|.||.+.- .+.+..-.. . .- --..+.|+|....|++-...
T Consensus 54 GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~ 133 (671)
T PF15390_consen 54 GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTAR 133 (671)
T ss_pred eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecC
Confidence 44456899999983 33555566678899998852 222211111 1 11 12467899999988877666
Q ss_pred CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeee
Q psy15549 256 RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTH 335 (621)
Q Consensus 256 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~ 335 (621)
..-.+++++.....-. .+-...+.|.|.+|.+||+.|+++-| ..-.-++||-..
T Consensus 134 dvSV~~sV~~d~srVk----------------------aDi~~~G~IhCACWT~DG~RLVVAvG----SsLHSyiWd~~q 187 (671)
T PF15390_consen 134 DVSVLPSVHCDSSRVK----------------------ADIKTSGLIHCACWTKDGQRLVVAVG----SSLHSYIWDSAQ 187 (671)
T ss_pred ceeEeeeeeeCCceEE----------------------EeccCCceEEEEEecCcCCEEEEEeC----CeEEEEEecCch
Confidence 5545666543221111 11134567899999999999988765 333445666443
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.91 Score=45.42 Aligned_cols=104 Identities=13% Similarity=0.194 Sum_probs=55.5
Q ss_pred CeEEEEECCCCCEEEEEe-----------CCC-cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEE
Q psy15549 131 AVNVVRFSPNGELLASGD-----------DES-TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198 (621)
Q Consensus 131 ~V~~i~~sp~g~~l~s~s-----------~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 198 (621)
....|+|.++|+++++.. ..+ .|.+++-.++.-... ....+.......+.+
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d-----------------~~~vfa~~l~~p~Gi 77 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYD-----------------KSNVFAEELSMVTGL 77 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcc-----------------eeEEeecCCCCccce
Confidence 456789999999777653 223 666665433211100 012222333456889
Q ss_pred EECCCCCEEEEEeCCCeEEEEECCCC-----c--EE-EEecc----CCcceEEEEEcCCCCEEEEEe
Q psy15549 199 SWSPTSTHLISGSVDNTAIMWDVHKG-----K--NL-GILTE----HKKFVQGVAWDPKNQYVATLS 253 (621)
Q Consensus 199 ~~spd~~~l~s~~~dg~i~vwd~~~~-----~--~~-~~~~~----~~~~v~~l~~sp~~~~l~s~~ 253 (621)
++.+++ +++ ++.....++.|.... + .+ ..+.. +......++|.|||.+.++.+
T Consensus 78 ~~~~~G-lyV-~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 78 AVAVGG-VYV-ATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred eEecCC-EEE-eCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 999888 444 444443334454211 1 11 12222 234467899999998766544
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.49 Score=47.33 Aligned_cols=65 Identities=14% Similarity=0.190 Sum_probs=33.6
Q ss_pred CcEEEEEEccCCCEEEEEcCCceEEE-EeccCccccccce-ecccccc----cCCCeEEEEECCCCCEEEEEe
Q psy15549 82 KAVNVVRFSPNGELLASGDDVGKEIW-YLTERESGIANVE-FASDLSR----HQKAVNVVRFSPNGELLASGD 148 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d~~v~iw-~~~~~~~~~~~~~-~~~~~~~----h~~~V~~i~~sp~g~~l~s~s 148 (621)
.....+++.++| ++++ +...|..| +...........+ ....+.. +......++|.|||.+.++-+
T Consensus 72 ~~p~Gi~~~~~G-lyV~-~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 72 SMVTGLAVAVGG-VYVA-TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred CCccceeEecCC-EEEe-CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 456889999999 4444 43344333 3322111100111 1122222 234577899999998766554
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=95.18 E-value=4 Score=41.06 Aligned_cols=154 Identities=10% Similarity=0.105 Sum_probs=89.8
Q ss_pred ceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc-----CCCEEEEEcCCce
Q psy15549 30 CYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-----NGELLASGDDVGK 104 (621)
Q Consensus 30 ~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp-----dg~~las~~d~~v 104 (621)
...|++|+..|.++ |++..........+-+... -..+|..++.-. +...||.-.-..+
T Consensus 37 ~d~IivGS~~G~Lr--------------Iy~P~~~~~~~~~lllE~~---l~~PILqv~~G~F~s~~~~~~LaVLhP~kl 99 (418)
T PF14727_consen 37 SDKIIVGSYSGILR--------------IYDPSGNEFQPEDLLLETQ---LKDPILQVECGKFVSGSEDLQLAVLHPRKL 99 (418)
T ss_pred ccEEEEeccccEEE--------------EEccCCCCCCCccEEEEEe---cCCcEEEEEeccccCCCCcceEEEecCCEE
Confidence 36999999999999 7776544322211111111 246777776532 4467888888889
Q ss_pred EEEEeccCcccc--ccceecccccccCC--CeEEEEECC----C-CCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccc
Q psy15549 105 EIWYLTERESGI--ANVEFASDLSRHQK--AVNVVRFSP----N-GELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEE 175 (621)
Q Consensus 105 ~iw~~~~~~~~~--~~~~~~~~~~~h~~--~V~~i~~sp----~-g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~ 175 (621)
.||.+....... ...-.+..+..|.- ....+++-| . ..+|..=+.||.+.+++-+.....
T Consensus 100 ~vY~v~~~~g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~----------- 168 (418)
T PF14727_consen 100 SVYSVSLVDGTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFS----------- 168 (418)
T ss_pred EEEEEEecCCCcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEE-----------
Confidence 999885433220 00011122222322 233333333 2 247888899999999986554321
Q ss_pred cccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC
Q psy15549 176 NVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH 222 (621)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~ 222 (621)
..+.. .--.-.+.|++.-..|++++.+..+.-|...
T Consensus 169 ----------~~lp~-~llPgPl~Y~~~tDsfvt~sss~~l~~Yky~ 204 (418)
T PF14727_consen 169 ----------RFLPD-FLLPGPLCYCPRTDSFVTASSSWTLECYKYQ 204 (418)
T ss_pred ----------EEcCC-CCCCcCeEEeecCCEEEEecCceeEEEecHH
Confidence 12222 2222357788877889999988888888653
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=94.98 E-value=3.1 Score=38.74 Aligned_cols=128 Identities=17% Similarity=0.235 Sum_probs=89.9
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC-CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCce
Q psy15549 189 RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH-KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKK 267 (621)
Q Consensus 189 ~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~ 267 (621)
.+-...+.++.|+|+.+.|++......-.|+=-.+|+.+.++... -.....+.+..+|++.++--.++.+.++.+....
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADT 161 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence 344556999999999999988888777777766789988877431 2345678888888888888788999999887765
Q ss_pred eeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeee
Q psy15549 268 VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
.+..+... ..++-.....+...-.++|+|....|.++- ...-+.++...
T Consensus 162 ~~~~~~~~-------------~i~L~~~~k~N~GfEGlA~d~~~~~l~~aK-----Er~P~~I~~~~ 210 (316)
T COG3204 162 TVISAKVQ-------------KIPLGTTNKKNKGFEGLAWDPVDHRLFVAK-----ERNPIGIFEVT 210 (316)
T ss_pred cEEeccce-------------EEeccccCCCCcCceeeecCCCCceEEEEE-----ccCCcEEEEEe
Confidence 44333211 112222222245568899999999888877 56666666655
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=94.82 E-value=1 Score=47.38 Aligned_cols=120 Identities=12% Similarity=0.259 Sum_probs=73.7
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEEC--CCCCEEEEEeCCCcEEEEEc
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFS--PNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s--p~g~~l~s~s~dg~i~vwd~ 158 (621)
....-+.-|.-++..++.+ ...+.|||...+. ++....+ ...+.|.++.|. |+|+.+++.|..+.|.+|.-
T Consensus 30 ~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~-----lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q 103 (631)
T PF12234_consen 30 SNPSLISGSSIKKIAVVDSSRSELTIWDTRSGV-----LEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQ 103 (631)
T ss_pred CCcceEeecccCcEEEEECCCCEEEEEEcCCcE-----EEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence 3445555556566555544 5568999998763 2333333 446789999996 58899999899999999853
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeee--ecCCC-CCeEEEEECCCCCEEEEEeCCCeEEEEEC
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKI--LRGHL-EDVYDISWSPTSTHLISGSVDNTAIMWDV 221 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~v~~i~~spd~~~l~s~~~dg~i~vwd~ 221 (621)
....... ....|...+. +..|. .+|.+..|.++|.+++.++ +.+.|+|-
T Consensus 104 ~R~dy~~------------~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 104 LRYDYTN------------KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred cchhhhc------------CCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 2211110 0111222222 22333 5789999999996555443 57888864
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.045 Score=57.66 Aligned_cols=134 Identities=14% Similarity=0.120 Sum_probs=80.9
Q ss_pred cccccCcEEEEEEcc-CCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECC---CCCEEEEEeCCCc
Q psy15549 77 LSRHQKAVNVVRFSP-NGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP---NGELLASGDDEST 152 (621)
Q Consensus 77 ~~~h~~~V~~l~~sp-dg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp---~g~~l~s~s~dg~ 152 (621)
+++..+.|-.+.|.. +...++ -.-+...||++..-.+....--.++........+.-+.|.| +..++..+-.+++
T Consensus 128 ~kgf~G~v~dl~fah~~~pk~~-~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~ 206 (1283)
T KOG1916|consen 128 AKGFPGGVGDLQFAHTKCPKGR-RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGE 206 (1283)
T ss_pred HhcCCCCcccccccccCChHHH-HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCc
Confidence 456677788887754 212222 11345678887754332221111222222233445555655 5667777788889
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 232 (621)
|++........ ..+.+|...+..++|-..|-+++.+
T Consensus 207 i~lL~~~ra~~----------------------~l~rsHs~~~~d~a~~~~g~~~l~~---------------------- 242 (1283)
T KOG1916|consen 207 IRLLNINRALR----------------------SLFRSHSQRVTDMAFFAEGVLKLAS---------------------- 242 (1283)
T ss_pred eeEeeechHHH----------------------HHHHhcCCCcccHHHHhhchhhhee----------------------
Confidence 99887765542 3455688888888876655332222
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQ 264 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~ 264 (621)
.+|||..|+.++.||.++.|.+.
T Consensus 243 ---------lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 243 ---------LSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred ---------eCCCCcEEEEeecCCccceeeee
Confidence 78999999999999988888763
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=94.71 E-value=2.1 Score=45.57 Aligned_cols=169 Identities=10% Similarity=0.095 Sum_probs=96.2
Q ss_pred CCEEEEEcCCceEEEEeccCcccccc---ceec----------ccc--cccCCCeEEEEECC--CCCEEEEEeCCCcEEE
Q psy15549 93 GELLASGDDVGKEIWYLTERESGIAN---VEFA----------SDL--SRHQKAVNVVRFSP--NGELLASGDDESTIIV 155 (621)
Q Consensus 93 g~~las~~d~~v~iw~~~~~~~~~~~---~~~~----------~~~--~~h~~~V~~i~~sp--~g~~l~s~s~dg~i~v 155 (621)
+.+|+.+..+.|.||+.......... +... ... ..-...|+.|.... ....|+.|..||.|.+
T Consensus 49 ~n~LFiA~~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~~ 128 (717)
T PF08728_consen 49 RNLLFIAYQSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVLA 128 (717)
T ss_pred CCEEEEEECCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEEE
Confidence 78888888999999998754331100 0000 000 00123466665544 4458899999999999
Q ss_pred EEccCCCC-CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEEC--CCCCEEEEEeCCCeEEEEECCCC--cEEE-E
Q psy15549 156 WKQKTDQD-LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS--PTSTHLISGSVDNTAIMWDVHKG--KNLG-I 229 (621)
Q Consensus 156 wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s--pd~~~l~s~~~dg~i~vwd~~~~--~~~~-~ 229 (621)
|.+++-.. +..... ..... .......+.. ...-...++.++++ ...++||++++...|.||-.... +... .
T Consensus 129 Yyt~~I~~~i~~~~~-~~~~~-~~r~~i~P~f-~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~ 205 (717)
T PF08728_consen 129 YYTETIIEAIERFSE-DNDSG-FSRLKIKPFF-HLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVP 205 (717)
T ss_pred EEHHHHHHHHHhhcc-ccccc-cccccCCCCe-EeecCCceeEEEEEecCcceEEEEecCCceEEEEEEecccccccccc
Confidence 97632110 000000 00000 0000000001 11234478999998 78889999999888888765432 1111 1
Q ss_pred eccCCcceEEEEEcCCC-----C-EEEEEeCCCcEEEEEcc
Q psy15549 230 LTEHKKFVQGVAWDPKN-----Q-YVATLSSDRSLRTYSIQ 264 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp~~-----~-~l~s~~~dg~i~iwd~~ 264 (621)
-..+...|.+|+|-++. . +|++++-.|.+.+|++.
T Consensus 206 s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~ 246 (717)
T PF08728_consen 206 SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK 246 (717)
T ss_pred ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence 11356678899997643 2 67788889999998883
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=94.54 E-value=5.8 Score=39.85 Aligned_cols=40 Identities=13% Similarity=0.071 Sum_probs=31.9
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
...+.+++.+|++++.++...=|.|.++|+.++..++.++
T Consensus 307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWK 346 (415)
T PF14655_consen 307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWK 346 (415)
T ss_pred CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhc
Confidence 3457788899998888877677899999998888777665
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=94.52 E-value=4 Score=37.85 Aligned_cols=118 Identities=13% Similarity=0.026 Sum_probs=73.5
Q ss_pred CeEEEEECCCCCEEEEEeCCC--cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE
Q psy15549 131 AVNVVRFSPNGELLASGDDES--TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 131 ~V~~i~~sp~g~~l~s~s~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~ 208 (621)
....+.|..+|.++-+.+.-| .|+.+|+.+++..... .+. ..---..++... ++...
T Consensus 46 FTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~-------------------~l~-~~~FgEGit~~~-d~l~q 104 (264)
T PF05096_consen 46 FTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSV-------------------PLP-PRYFGEGITILG-DKLYQ 104 (264)
T ss_dssp EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEE-------------------E-T-TT--EEEEEEET-TEEEE
T ss_pred cCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEE-------------------ECC-ccccceeEEEEC-CEEEE
Confidence 355778877888888888766 7999999998753211 111 111122333332 23444
Q ss_pred EEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeec
Q psy15549 209 SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 209 s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
..-.++...+||..+.+.+.++.- .+.=..++ .+++.|+.......|+++|..+.+....+
T Consensus 105 LTWk~~~~f~yd~~tl~~~~~~~y-~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i 165 (264)
T PF05096_consen 105 LTWKEGTGFVYDPNTLKKIGTFPY-PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTI 165 (264)
T ss_dssp EESSSSEEEEEETTTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEE
T ss_pred EEecCCeEEEEccccceEEEEEec-CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEE
Confidence 455688999999999999888853 34556676 45667776666778999998887766554
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=94.42 E-value=9.4 Score=41.75 Aligned_cols=343 Identities=9% Similarity=0.071 Sum_probs=170.8
Q ss_pred CCCeEEEeccccccCCc-ceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 13 RDPVLSVDIQLKQEKDN-CYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~-~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
...|.|+.++|-+...+ ..++++|..+..+.+. --..+...... .......-...|...+|-.
T Consensus 530 e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l-------------~~~pd~~~~~~---~~l~~~~iPRSIl~~~~e~ 593 (1096)
T KOG1897|consen 530 EYEVACLDISPLGDAPNKSRLLAVGLWSDISMIL-------------TFLPDLILITH---EQLSGEIIPRSILLTTFEG 593 (1096)
T ss_pred cceeEEEecccCCCCCCcceEEEEEeecceEEEE-------------EECCCcceeee---eccCCCccchheeeEEeec
Confidence 45799999998754222 3478888777666511 11111111000 0000111123466666777
Q ss_pred CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 92 NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 92 dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
|+.+|.++. ||.+..+.+...... +...+...-...++.--.|+..++.-+.|..|.-..+|.....-....+
T Consensus 594 d~~yLlvalgdG~l~~fv~d~~tg~---lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~kLv~spl--- 667 (1096)
T KOG1897|consen 594 DIHYLLVALGDGALLYFVLDINTGQ---LSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLVYSPL--- 667 (1096)
T ss_pred cceEEEEEcCCceEEEEEEEcccce---EccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCCcEEEecc---
Confidence 788888887 666654444433211 1111112224456666667665543333344555556653322211110
Q ss_pred CcccccccccceeeeeeecCCCCCe-EEEEECCC--CCEEEEEeCCCeEEEEECCCCcE--EEEeccCCcceEEEEEcCC
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDV-YDISWSPT--STHLISGSVDNTAIMWDVHKGKN--LGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v-~~i~~spd--~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~l~~sp~ 245 (621)
.-..+ ..+.|+.+ ...|+++. .+.+.+.-+..-+. ++++. -....+.+++.+.
T Consensus 668 --------------------s~kev~~~c~f~s~a~~d~l~~~~-~~~l~i~tid~iqkl~irtvp-l~~~prrI~~q~~ 725 (1096)
T KOG1897|consen 668 --------------------SLKEVNHMCPFNSDAYPDSLASAN-GGALTIGTIDEIQKLHIRTVP-LGESPRRICYQES 725 (1096)
T ss_pred --------------------chHHhhhhcccccccCCceEEEec-CCceEEEEecchhhcceeeec-CCCChhheEeccc
Confidence 00001 11223222 13455544 44566665554332 23332 3344667788774
Q ss_pred CCEEEEEeCC--------------CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC-
Q psy15549 246 NQYVATLSSD--------------RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD- 310 (621)
Q Consensus 246 ~~~l~s~~~d--------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd- 310 (621)
...+++.+.. ..++++|-.+.+.+..... .....-..|.++.|..|
T Consensus 726 sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef-------------------~~~E~~~Si~s~~~~~d~ 786 (1096)
T KOG1897|consen 726 SLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEF-------------------ERNETALSIISCKFTDDP 786 (1096)
T ss_pred ceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEeeccc-------------------cccceeeeeeeeeecCCC
Confidence 4444444321 1366666666554443221 11122234567778888
Q ss_pred CCeEEecccccc-----CCCCCCcceeeeeeeeecccCCCceecCC--cccceeeeeccceeeecCCCCCCCCccCCCcE
Q psy15549 311 GQLLIAPSGCLE-----NSDSTRKPISVTHVFTRACLNKPAVCLPS--LQYYSVAVKCCPVLFELKPSDDKPLFKLPYRI 383 (621)
Q Consensus 311 g~~l~~~s~~~~-----~~d~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (621)
+.++++|++-.. ...|.+.++.... ......... .++.+.++. -.+|+
T Consensus 787 ~t~~vVGT~~v~Pde~ep~~GRIivfe~~e-------~~~L~~v~e~~v~Gav~aL~-----------------~fngk- 841 (1096)
T KOG1897|consen 787 NTYYVVGTGLVYPDENEPVNGRIIVFEFEE-------LNSLELVAETVVKGAVYALV-----------------EFNGK- 841 (1096)
T ss_pred ceEEEEEEEeeccCCCCcccceEEEEEEec-------CCceeeeeeeeeccceeehh-----------------hhCCe-
Confidence 778888774211 1233444444332 000001100 111111111 11223
Q ss_pred EEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 384 VIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 384 l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
+.++-+..|++|+..+.+.++.- ..|..++..+...-.|..++.|..=+++.+..+...+
T Consensus 842 -llA~In~~vrLye~t~~~eLr~e-~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~e 901 (1096)
T KOG1897|consen 842 -LLAGINQSVRLYEWTTERELRIE-CNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDE 901 (1096)
T ss_pred -EEEecCcEEEEEEccccceehhh-hcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccC
Confidence 33455678999999988666554 3477889999999999999999988888887776444
|
|
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=94.41 E-value=1.8 Score=42.65 Aligned_cols=162 Identities=14% Similarity=0.177 Sum_probs=102.5
Q ss_pred EEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 84 VNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 84 V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
-+.+-|...++.|.+...+++.=|-....+... ++.--....++|.++.||+|.+.||.--.+.+|.+++....+.
T Consensus 25 sngvFfDDaNkqlfavrSggatgvvvkgpndDV----piSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~ 100 (657)
T KOG2377|consen 25 SNGVFFDDANKQLFAVRSGGATGVVVKGPNDDV----PISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNS 100 (657)
T ss_pred ccceeeccCcceEEEEecCCeeEEEEeCCCCCC----CceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCch
Confidence 345556666667777667777777776654321 1222233556999999999999999999999999999854443
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-CcEEEEeccCCcceEEEEE
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK-GKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~l~~ 242 (621)
.... ...-......|....|+.+ .-+|.....| +-+|-... ...++..+.|...|.=..|
T Consensus 101 ~l~~-----------------~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~y 161 (657)
T KOG2377|consen 101 QLEY-----------------TQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMY 161 (657)
T ss_pred hhHH-----------------HHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEE
Confidence 2111 1112234456889999865 4566655444 55665433 2334555667788888889
Q ss_pred cCCCCEEEEEe--CCCcEEEEEccCcee
Q psy15549 243 DPKNQYVATLS--SDRSLRTYSIQSKKV 268 (621)
Q Consensus 243 sp~~~~l~s~~--~dg~i~iwd~~~~~~ 268 (621)
.++.+.++.++ ..+++.=+.++++..
T Consensus 162 c~et~v~LL~t~~~~n~lnpf~~~~~~v 189 (657)
T KOG2377|consen 162 CPETAVILLSTTVLENVLNPFHFRAGTM 189 (657)
T ss_pred ccccceEeeeccccccccccEEEeecee
Confidence 88887654443 345555566655543
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=94.33 E-value=2.4 Score=44.98 Aligned_cols=146 Identities=14% Similarity=0.166 Sum_probs=77.8
Q ss_pred CCCEEEEEc-CCc-----eEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC------cEEEEEcc
Q psy15549 92 NGELLASGD-DVG-----KEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES------TIIVWKQK 159 (621)
Q Consensus 92 dg~~las~~-d~~-----v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg------~i~vwd~~ 159 (621)
+|.+.|+|+ ++. +-.||...... .....+.......-.+.+ +|.+.++||.++ ++..||..
T Consensus 380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W-----~~va~m~~~r~~~gv~~~--~g~iYi~GG~~~~~~~l~sve~YDP~ 452 (571)
T KOG4441|consen 380 DGKLYAVGGFDGEKSLNSVECYDPVTNKW-----TPVAPMLTRRSGHGVAVL--GGKLYIIGGGDGSSNCLNSVECYDPE 452 (571)
T ss_pred CCEEEEEeccccccccccEEEecCCCCcc-----cccCCCCcceeeeEEEEE--CCEEEEEcCcCCCccccceEEEEcCC
Confidence 577777777 433 56777776643 333322222222222333 677888888654 46677777
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCe-----EEEEECCCCcEEEE--ecc
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNT-----AIMWDVHKGKNLGI--LTE 232 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~-----i~vwd~~~~~~~~~--~~~ 232 (621)
++.- ........-........+ ++.+.+.|+.|+. |..||..+.+-... +..
T Consensus 453 t~~W-------------------~~~~~M~~~R~~~g~a~~--~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~ 511 (571)
T KOG4441|consen 453 TNTW-------------------TLIAPMNTRRSGFGVAVL--NGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTS 511 (571)
T ss_pred CCce-------------------eecCCcccccccceEEEE--CCEEEEECCccCCCccceEEEEcCCCCceeEcccCcc
Confidence 6653 222222222222222222 5677888887763 67788876553322 222
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCC-----cEEEEEccCce
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDR-----SLRTYSIQSKK 267 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg-----~i~iwd~~~~~ 267 (621)
....+....+ ++...++|+.|| +|..||..+.+
T Consensus 512 ~rs~~g~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~d~ 549 (571)
T KOG4441|consen 512 PRSAVGVVVL--GGKLYAVGGFDGNNNLNTVECYDPETDT 549 (571)
T ss_pred ccccccEEEE--CCEEEEEecccCccccceeEEcCCCCCc
Confidence 2222322332 366777788775 57777766654
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=94.33 E-value=1.6 Score=45.98 Aligned_cols=137 Identities=14% Similarity=0.198 Sum_probs=81.1
Q ss_pred ceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCcceEEEEEc--CCCCEEEEEeCCCc
Q psy15549 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT-EHKKFVQGVAWD--PKNQYVATLSSDRS 257 (621)
Q Consensus 181 ~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~l~~s--p~~~~l~s~~~dg~ 257 (621)
.|.....+...-..+.-+.-+.-++..++-+....+.|||.+.+.....-. ...+.|..+.|. |+|+.+++.|....
T Consensus 18 ~w~~t~~~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~ 97 (631)
T PF12234_consen 18 EWLLTSTFETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHH 97 (631)
T ss_pred EEEEEEEEecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcE
Confidence 344455555555556666666666655555556789999998887544332 346789999885 68899999999999
Q ss_pred EEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCC
Q psy15549 258 LRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTR 328 (621)
Q Consensus 258 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i 328 (621)
|.+|.-......... | .......+....-...+|.+..|.++|..++.++......+..+
T Consensus 98 v~l~~Q~R~dy~~~~-----p------~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sGNqlfv~dk~~ 157 (631)
T PF12234_consen 98 VLLYTQLRYDYTNKG-----P------SWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSGNQLFVFDKWL 157 (631)
T ss_pred EEEEEccchhhhcCC-----c------ccceeEEEEeecCCCCCccceeEecCCeEEEEeCCEEEEECCCc
Confidence 999864221100000 0 00000001111112246789999999988877664433334333
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=94.22 E-value=2.1 Score=46.50 Aligned_cols=93 Identities=20% Similarity=0.339 Sum_probs=57.8
Q ss_pred cCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC-CCCCCCCCCCcccccccccceeeeeee--cCCCCCeEEEEECCC-
Q psy15549 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD-QDLPEFPSSNLDEENVNKEHWIVTKIL--RGHLEDVYDISWSPT- 203 (621)
Q Consensus 128 h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~spd- 203 (621)
-...|..|.++|+|++||..|..| |.|..+... .....+.... ....++...+...+ ..+...|..+.|+|.
T Consensus 83 ~~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~---~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s 158 (717)
T PF10168_consen 83 PLFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGK---KEINCRTVPVDERFFTSNSSLEIKQVRWHPWS 158 (717)
T ss_pred CceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCC---cceeEEEEEechhhccCCCCceEEEEEEcCCC
Confidence 345789999999999999988765 555555321 1111110000 01111122111112 244568999999995
Q ss_pred --CCEEEEEeCCCeEEEEECCCC
Q psy15549 204 --STHLISGSVDNTAIMWDVHKG 224 (621)
Q Consensus 204 --~~~l~s~~~dg~i~vwd~~~~ 224 (621)
+.+|++-..|+++++||+...
T Consensus 159 ~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 159 ESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CCCCeEEEEecCCEEEEEecCCC
Confidence 578999999999999999754
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=94.16 E-value=4.4 Score=43.07 Aligned_cols=63 Identities=10% Similarity=0.118 Sum_probs=34.2
Q ss_pred CCCEEEEEeCC--------CeEEEEECCCCcEEEE--eccCCcceEEEEEcCCCCEEEEEeCC-----CcEEEEEccCce
Q psy15549 203 TSTHLISGSVD--------NTAIMWDVHKGKNLGI--LTEHKKFVQGVAWDPKNQYVATLSSD-----RSLRTYSIQSKK 267 (621)
Q Consensus 203 d~~~l~s~~~d--------g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~~~~l~s~~~d-----g~i~iwd~~~~~ 267 (621)
++..++.|+.+ ..+.+||..+.+-... +.........+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 437 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 437 DGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKTNT 514 (534)
T ss_pred CCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence 55666666643 2388899876643221 1111111112222 56677777654 468888887654
|
|
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=94.07 E-value=5.7 Score=39.28 Aligned_cols=108 Identities=12% Similarity=0.186 Sum_probs=79.1
Q ss_pred cCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEc
Q psy15549 11 HNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 90 (621)
Q Consensus 11 ~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 90 (621)
..+++|.++.||+|.+ .||+--.+..|. +.+....+... ....+.+..+..|....|+
T Consensus 64 ~d~G~I~SIkFSlDnk-----ilAVQR~~~~v~--------------f~nf~~d~~~l---~~~~~ck~k~~~IlGF~W~ 121 (657)
T KOG2377|consen 64 DDKGEIKSIKFSLDNK-----ILAVQRTSKTVD--------------FCNFIPDNSQL---EYTQECKTKNANILGFCWT 121 (657)
T ss_pred cCCCceeEEEeccCcc-----eEEEEecCceEE--------------EEecCCCchhh---HHHHHhccCcceeEEEEEe
Confidence 3577999999999999 999999999998 66653322211 1222334445668999998
Q ss_pred cCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEE
Q psy15549 91 PNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG 147 (621)
Q Consensus 91 pdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~ 147 (621)
.+ .-+|.-.+.++-+|.+.... ..++....|...|.-..|.++.+.++-+
T Consensus 122 ~s-~e~A~i~~~G~e~y~v~pek------rslRlVks~~~nvnWy~yc~et~v~LL~ 171 (657)
T KOG2377|consen 122 SS-TEIAFITDQGIEFYQVLPEK------RSLRLVKSHNLNVNWYMYCPETAVILLS 171 (657)
T ss_pred cC-eeEEEEecCCeEEEEEchhh------hhhhhhhhcccCccEEEEccccceEeee
Confidence 76 77888888899999887653 4455667788899999999987754443
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=93.90 E-value=7.9 Score=38.92 Aligned_cols=88 Identities=13% Similarity=0.123 Sum_probs=63.0
Q ss_pred eeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEc----CC--------------
Q psy15549 184 VTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD----PK-------------- 245 (621)
Q Consensus 184 ~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~s----p~-------------- 245 (621)
....+......+.+++.+|++++.|+...-|.|.++|+.++..++.+++..+.= +.|- +.
T Consensus 299 ~r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAq--c~wi~~~~~~~~~~~~~~~~~~~~ 376 (415)
T PF14655_consen 299 MRFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQ--CGWIEVPEEGDRDRSNSNSPKSSS 376 (415)
T ss_pred eEEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccce--EEEEEeecccccccccccccCCCC
Confidence 344556667779999999999988888888999999999998888777654321 1121 11
Q ss_pred --CCE-EEEEeCCCcEEEEEccCceeeeecc
Q psy15549 246 --NQY-VATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 246 --~~~-l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
..+ ++-+-..|.|.||.++.|..+..+.
T Consensus 377 ~~~l~LvIyaprRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 377 RFALFLVIYAPRRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred cceEEEEEEeccCCeEEEEecCCCCEEEEEE
Confidence 112 2345668999999999988776553
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.69 E-value=9.3 Score=39.85 Aligned_cols=144 Identities=12% Similarity=0.067 Sum_probs=69.4
Q ss_pred cCCCEEEEEc-C--CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC---cEEEEEccCCCCC
Q psy15549 91 PNGELLASGD-D--VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES---TIIVWKQKTDQDL 164 (621)
Q Consensus 91 pdg~~las~~-d--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg---~i~vwd~~~~~~~ 164 (621)
-+|.+.+.|+ + ..+..|+...+.. .....+.........+.+ +|++.+.||.++ .+..||..++.
T Consensus 317 ~~~~iYviGG~~~~~sve~ydp~~n~W-----~~~~~l~~~r~~~~~~~~--~g~IYviGG~~~~~~~ve~ydp~~~~-- 387 (480)
T PHA02790 317 ANNKLYVVGGLPNPTSVERWFHGDAAW-----VNMPSLLKPRCNPAVASI--NNVIYVIGGHSETDTTTEYLLPNHDQ-- 387 (480)
T ss_pred ECCEEEEECCcCCCCceEEEECCCCeE-----EECCCCCCCCcccEEEEE--CCEEEEecCcCCCCccEEEEeCCCCE--
Confidence 4677777776 2 3466677554422 222333221212222222 677777777553 35667765543
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE--EeccCCcceEEEEE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLG--ILTEHKKFVQGVAW 242 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~--~~~~~~~~v~~l~~ 242 (621)
|.....+.........+. -+++..+.| |.+.+||..+.+-.. .+.........+.
T Consensus 388 -----------------W~~~~~m~~~r~~~~~~~--~~~~IYv~G---G~~e~ydp~~~~W~~~~~m~~~r~~~~~~v- 444 (480)
T PHA02790 388 -----------------WQFGPSTYYPHYKSCALV--FGRRLFLVG---RNAEFYCESSNTWTLIDDPIYPRDNPELII- 444 (480)
T ss_pred -----------------EEeCCCCCCccccceEEE--ECCEEEEEC---CceEEecCCCCcEeEcCCCCCCccccEEEE-
Confidence 322222221111122222 255566666 357788887654322 1211112222222
Q ss_pred cCCCCEEEEEeCC-----CcEEEEEccCce
Q psy15549 243 DPKNQYVATLSSD-----RSLRTYSIQSKK 267 (621)
Q Consensus 243 sp~~~~l~s~~~d-----g~i~iwd~~~~~ 267 (621)
-+|+..+.|+.+ ..+..||..+.+
T Consensus 445 -~~~~IYviGG~~~~~~~~~ve~Yd~~~~~ 473 (480)
T PHA02790 445 -VDNKLLLIGGFYRGSYIDTIEVYNNRTYS 473 (480)
T ss_pred -ECCEEEEECCcCCCcccceEEEEECCCCe
Confidence 356777777754 357778876654
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.67 E-value=7.8 Score=38.12 Aligned_cols=146 Identities=13% Similarity=0.123 Sum_probs=79.8
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE
Q psy15549 129 QKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 129 ~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~ 208 (621)
...+..+.+.|++.+++++. .|.+..- .+.+.. .|.. ....-...++++.+.++++.++
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s-~~~gg~-----------------tW~~--~~~~~~~~l~~i~~~~~g~~~~ 230 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSS-RGNFYST-WEPGQT-----------------AWTP--HQRNSSRRLQSMGFQPDGNLWM 230 (334)
T ss_pred cceEEEEEECCCCeEEEEeC-CceEEEE-cCCCCC-----------------eEEE--eeCCCcccceeeeEcCCCCEEE
Confidence 45788999999887766654 4544321 112211 1211 1223456789999999988777
Q ss_pred EEeCCCeEEEEECCCCcEEEEecc----CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccc
Q psy15549 209 SGSVDNTAIMWDVHKGKNLGILTE----HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHE 284 (621)
Q Consensus 209 s~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 284 (621)
++. .|.+++=....+..-..... ....+..+.+.|++..++ ++.+|.+. .....++.-......
T Consensus 231 vg~-~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~-~S~d~G~tW~~~~~~--------- 298 (334)
T PRK13684 231 LAR-GGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL-VSKDGGKTWEKDPVG--------- 298 (334)
T ss_pred Eec-CCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEE-EcCCCeEE-EeCCCCCCCeECCcC---------
Confidence 654 57665323344433222111 223577889999877655 55667554 344444332221100
Q ss_pred cccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 285 LFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 285 ~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
......+..+.|..+++.++++.
T Consensus 299 -----------~~~~~~~~~~~~~~~~~~~~~G~ 321 (334)
T PRK13684 299 -----------EEVPSNFYKIVFLDPEKGFVLGQ 321 (334)
T ss_pred -----------CCCCcceEEEEEeCCCceEEECC
Confidence 01122356778877777777765
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=93.59 E-value=2.4 Score=44.62 Aligned_cols=52 Identities=13% Similarity=0.371 Sum_probs=39.1
Q ss_pred CCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q psy15549 212 VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 212 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~ 265 (621)
..-.|+||++ +|+.+..+.-..+.+-.+.|+.+.. |++...+|++.+|++-.
T Consensus 62 a~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 62 ARPYIRIFNI-SGQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYGLLG 113 (829)
T ss_pred cceeEEEEec-cccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEeecch
Confidence 3456889987 6777766655555788999987655 56678999999999854
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.65 Score=50.84 Aligned_cols=160 Identities=13% Similarity=0.105 Sum_probs=93.8
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEe-cC-CceEEeeeccCccccccceeEEeccccccc----cceeecccccc
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTG-GA-DSHVFDYLLKIPHRLKTGKIWYLTERESGI----ANVEFASDLSR 79 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg-~~-dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~----~~~~~~~~~~~ 79 (621)
..+.++..-+|..+...+|+. ..++. +. +-.|. .+|+..-.... ..++..+....
T Consensus 93 ~t~~v~k~~pi~~~v~~~D~t-----~s~v~~tsng~~v~--------------~fD~~~fs~s~~~~~~pl~~s~ts~e 153 (1405)
T KOG3630|consen 93 LTFKVEKEIPIVIFVCFHDAT-----DSVVVSTSNGEAVY--------------SFDLEEFSESRYETTVPLKNSATSFE 153 (1405)
T ss_pred cceeeeccccceEEEeccCCc-----eEEEEEecCCceEE--------------EEehHhhhhhhhhhccccccccchhc
Confidence 456777777888888899876 44433 23 33566 44443321110 11111122233
Q ss_pred ccCcEEEEEEccCC--CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Q psy15549 80 HQKAVNVVRFSPNG--ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWK 157 (621)
Q Consensus 80 h~~~V~~l~~spdg--~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd 157 (621)
...-+.++.|+|.- ..++...|..+++..+..... .... -.-...+++++|+|.|+.++.|...|++.-|.
T Consensus 154 k~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~------~v~s-~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~ 226 (1405)
T KOG3630|consen 154 KPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQ------NVTS-FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYE 226 (1405)
T ss_pred cccccccccccCCccchhhhhccccchhhhhhhhhhh------hhcc-cCcccceeeEEeccccceeeEecCCCeEEEee
Confidence 34456788898854 344455588888887765421 1111 12345789999999999999999999998886
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEE
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLIS 209 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s 209 (621)
..-. ....+++.. ......|.+|+|-....++++
T Consensus 227 P~le-ik~~ip~Pp-----------------~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 227 PSLE-IKSEIPEPP-----------------VEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred cccc-eeecccCCC-----------------cCCCcceeEEEEecceeEEEE
Confidence 4433 112221110 011467889999876666665
|
|
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=93.06 E-value=8.7 Score=37.65 Aligned_cols=163 Identities=15% Similarity=0.195 Sum_probs=85.4
Q ss_pred cCcEEEEEEcc-CCCEEEEEcCCc------eEEEEeccCccccccce--ecccccccCC--------CeEEEEECCCCCE
Q psy15549 81 QKAVNVVRFSP-NGELLASGDDVG------KEIWYLTERESGIANVE--FASDLSRHQK--------AVNVVRFSPNGEL 143 (621)
Q Consensus 81 ~~~V~~l~~sp-dg~~las~~d~~------v~iw~~~~~~~~~~~~~--~~~~~~~h~~--------~V~~i~~sp~g~~ 143 (621)
-+.+..+.+.+ ++.+++...++. +..+.+.........+. ....+..-.+ ..-+|++.++|.+
T Consensus 19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~ 98 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF 98 (326)
T ss_pred cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence 35778899995 556666655555 44444443111111111 1111222111 3347888778888
Q ss_pred EEEEeCC------CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-----
Q psy15549 144 LASGDDE------STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV----- 212 (621)
Q Consensus 144 l~s~s~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~----- 212 (621)
+++.-.+ ..|..++.. +.....++.+........ ...-......+.+++++|+|+.|+++.+
T Consensus 99 ~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~------~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~ 171 (326)
T PF13449_consen 99 WISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDAN------GTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQ 171 (326)
T ss_pred EEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccC------ccccccCCCCeEEEEECCCCCEEEEEECccccC
Confidence 8777666 778888866 554443321110000000 0012235567899999999997666543
Q ss_pred CC--e-------EEE--EECCC-CcE----EEEecc-----CCcceEEEEEcCCCCEEE
Q psy15549 213 DN--T-------AIM--WDVHK-GKN----LGILTE-----HKKFVQGVAWDPKNQYVA 250 (621)
Q Consensus 213 dg--~-------i~v--wd~~~-~~~----~~~~~~-----~~~~v~~l~~sp~~~~l~ 250 (621)
|+ . +++ ||..+ +.. .+.+.. ....|..+.+-+++++|+
T Consensus 172 d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLv 230 (326)
T PF13449_consen 172 DGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLV 230 (326)
T ss_pred CCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEE
Confidence 22 1 444 45443 222 222222 345678888888888665
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=93.05 E-value=9 Score=38.50 Aligned_cols=116 Identities=12% Similarity=0.163 Sum_probs=64.9
Q ss_pred cCcEEEEEEccCCCEEEEEcCCceEEEEeccCccc-cccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEcc
Q psy15549 81 QKAVNVVRFSPNGELLASGDDVGKEIWYLTERESG-IANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~-~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
...+.++.|.+++.+++++..+.+ +|....+... ...+.... ...-...+..+.|.+++..+++| ..|.+.... +
T Consensus 280 ~~~l~~v~~~~dg~l~l~g~~G~l-~~S~d~G~~~~~~~f~~~~-~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D 355 (398)
T PLN00033 280 ARRIQNMGWRADGGLWLLTRGGGL-YVSKGTGLTEEDFDFEEAD-IKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-D 355 (398)
T ss_pred ccceeeeeEcCCCCEEEEeCCceE-EEecCCCCcccccceeecc-cCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-C
Confidence 456889999999999988866654 4444333110 00111110 01112358889999887765554 567665543 3
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMW 219 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vw 219 (621)
.++. |.....-..-....+.+.|.++++.+++| .+|.|.-|
T Consensus 356 ~G~t------------------W~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il~~ 396 (398)
T PLN00033 356 GGKS------------------WKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLLRY 396 (398)
T ss_pred CCcc------------------eeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEEEe
Confidence 3332 11111112334568899998776656554 47776554
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.56 Score=29.41 Aligned_cols=31 Identities=16% Similarity=0.120 Sum_probs=25.7
Q ss_pred CCeEEEEECCCC---CEEEEEeCCCeEEEEECCC
Q psy15549 193 EDVYDISWSPTS---THLISGSVDNTAIMWDVHK 223 (621)
Q Consensus 193 ~~v~~i~~spd~---~~l~s~~~dg~i~vwd~~~ 223 (621)
+.|+++.|+|.. .+|+.+-..|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 468999999854 4788887789999999985
|
It contains a characteristic DLL sequence motif. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=93.03 E-value=16 Score=39.94 Aligned_cols=111 Identities=12% Similarity=0.141 Sum_probs=67.9
Q ss_pred CCeEEEEECCCCCEEEEEeC-----CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC
Q psy15549 130 KAVNVVRFSPNGELLASGDD-----ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS 204 (621)
Q Consensus 130 ~~V~~i~~sp~g~~l~s~s~-----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~ 204 (621)
-.+..+.|+|+|++|+.+.. .-.|++.|+.++..+.. .+.+ . -..++|++|+
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~--------------------~i~~-~--~~~~~w~~D~ 183 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPE--------------------LLDN-V--EPSFVWANDS 183 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCc--------------------cccC-c--ceEEEEeeCC
Confidence 34667899999998887542 23688899987753311 1111 1 1459999999
Q ss_pred CEEEEEeCC------CeEEEEECCCC--cEEEEeccCCcceE-EEEEcCCCCEEEEEeC---CCcEEEEEc
Q psy15549 205 THLISGSVD------NTAIMWDVHKG--KNLGILTEHKKFVQ-GVAWDPKNQYVATLSS---DRSLRTYSI 263 (621)
Q Consensus 205 ~~l~s~~~d------g~i~vwd~~~~--~~~~~~~~~~~~v~-~l~~sp~~~~l~s~~~---dg~i~iwd~ 263 (621)
+.|+....+ ..|+.+++.++ +....+........ .+..+.++++++..+. ++.+.+|+.
T Consensus 184 ~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 184 WTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred CEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 876665432 46888888887 33333433223232 3334448887665443 356888884
|
|
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=92.85 E-value=7.8 Score=35.77 Aligned_cols=150 Identities=15% Similarity=0.144 Sum_probs=88.8
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC---------CCcE
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD---------ESTI 153 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~---------dg~i 153 (621)
.-..|..-|||..-++-+...|.-.+-++.+. ..+.+ ....-........|.+.|++-+++.. .+.|
T Consensus 105 ~Phgiv~gpdg~~Witd~~~aI~R~dpkt~ev--t~f~l--p~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i 180 (353)
T COG4257 105 SPHGIVVGPDGSAWITDTGLAIGRLDPKTLEV--TRFPL--PLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVI 180 (353)
T ss_pred CCceEEECCCCCeeEecCcceeEEecCcccce--EEeec--ccccCCCcccceeeCCCccEEEeeccccceecCcccCce
Confidence 34456667777655554333444444333321 11111 23334456778889999998888752 1234
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE--ec
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI--LT 231 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~--~~ 231 (621)
++|+... ...-+.|+..|||..-++.-.+..|-..|..++..... -.
T Consensus 181 ~vfpaPq-------------------------------G~gpyGi~atpdGsvwyaslagnaiaridp~~~~aev~p~P~ 229 (353)
T COG4257 181 SVFPAPQ-------------------------------GGGPYGICATPDGSVWYASLAGNAIARIDPFAGHAEVVPQPN 229 (353)
T ss_pred eeeccCC-------------------------------CCCCcceEECCCCcEEEEeccccceEEcccccCCcceecCCC
Confidence 4444332 23456788999999888877777888888766632211 12
Q ss_pred cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCce
Q psy15549 232 EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKK 267 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~ 267 (621)
......+.+--+|.|+.-++....+.+..||.....
T Consensus 230 ~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s 265 (353)
T COG4257 230 ALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS 265 (353)
T ss_pred cccccccccccCccCcEEEeccCCceeeEeCccccc
Confidence 222334556667788887777667788888765543
|
|
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=92.84 E-value=8.6 Score=36.22 Aligned_cols=230 Identities=13% Similarity=0.084 Sum_probs=114.6
Q ss_pred eEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccc-----cccCcEEEEEEc
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLS-----RHQKAVNVVRFS 90 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~-----~h~~~V~~l~~s 90 (621)
-+.|+|+|.+. +.++....+...+||....... .-.. .+..++. ......+.+.|+
T Consensus 25 ~WGia~~p~~~-----~WVadngT~~~TlYdg~~~~~~---------g~~~-----~L~vtiP~~~~~~~~~~PTGiVfN 85 (336)
T TIGR03118 25 AWGLSYRPGGP-----FWVANTGTGTATLYVGNPDTQP---------LVQD-----PLVVVIPAPPPLAAEGTPTGQVFN 85 (336)
T ss_pred cceeEecCCCC-----EEEecCCcceEEeecCCccccc---------CCcc-----ceEEEecCCCCCCCCCCccEEEEe
Confidence 47899999998 8888888899995555411100 0000 0111111 112345666666
Q ss_pred cCCC-------------EEEEEcCCceEEEEeccCccccccceeccccc-ccCCCe-EEEEECC--CCCEEEEEe-CCCc
Q psy15549 91 PNGE-------------LLASGDDVGKEIWYLTERESGIANVEFASDLS-RHQKAV-NVVRFSP--NGELLASGD-DEST 152 (621)
Q Consensus 91 pdg~-------------~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V-~~i~~sp--~g~~l~s~s-~dg~ 152 (621)
.... +|.+..++.|.-|.......... .....+. ...+.| ..+++.. .+.+|+.+. ..++
T Consensus 86 ~~~~F~vt~~g~~~~a~Fif~tEdGTisaW~p~v~~t~~~--~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~ 163 (336)
T TIGR03118 86 GSDTFVVSGEGITGPSRFLFVTEDGTLSGWAPALGTTRMT--RAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGR 163 (336)
T ss_pred CCCceEEcCCCcccceeEEEEeCCceEEeecCcCCccccc--ccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCc
Confidence 4333 34444477788887543311000 0001111 111223 2344443 345555543 5788
Q ss_pred EEEEEccCCCCC--CCCCCCCcc--cccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Q psy15549 153 IIVWKQKTDQDL--PEFPSSNLD--EENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLG 228 (621)
Q Consensus 153 i~vwd~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~ 228 (621)
|.|+|-.-.... ..+...... ..+++ ....+..-.|+...-.++...=+.|..-|.|-+||+ .|..++
T Consensus 164 IDVFd~~f~~~~~~g~F~DP~iPagyAPFn-------Iqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~-~G~l~~ 235 (336)
T TIGR03118 164 IDVFKGSFRPPPLPGSFIDPALPAGYAPFN-------VQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL-NGQLLR 235 (336)
T ss_pred eEEecCccccccCCCCccCCCCCCCCCCcc-------eEEECCeEEEEEEecCCcccccccCCCcceEEEEcC-CCcEEE
Confidence 999975433221 011000000 00000 000111112222233333333344455688999997 688888
Q ss_pred Eecc--CCcceEEEEEcC------CCCEEEEEeCCCcEEEEEccCceeeeeccc
Q psy15549 229 ILTE--HKKFVQGVAWDP------KNQYVATLSSDRSLRTYSIQSKKVISRACR 274 (621)
Q Consensus 229 ~~~~--~~~~v~~l~~sp------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 274 (621)
.+.. .-...+.|+..| .+.+|+---.||+|..||..+++.+-.+..
T Consensus 236 r~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~ 289 (336)
T TIGR03118 236 RVASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLD 289 (336)
T ss_pred EeccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecC
Confidence 7732 233456677655 356666445599999999999887766653
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.69 Score=42.10 Aligned_cols=85 Identities=12% Similarity=0.196 Sum_probs=60.4
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccc------
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLS------ 78 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~------ 78 (621)
.|.+..++. +.. +..++. +|++-..+|.++ +||+..++.......+...+.
T Consensus 6 ~P~i~Lgs~--~~~--l~~~~~-----~Ll~iT~~G~l~--------------vWnl~~~k~~~~~~Si~pll~~~~~~~ 62 (219)
T PF07569_consen 6 LPPIVLGSP--VSF--LECNGS-----YLLAITSSGLLY--------------VWNLKKGKAVLPPVSIAPLLNSSPVSD 62 (219)
T ss_pred cCcEecCCc--eEE--EEeCCC-----EEEEEeCCCeEE--------------EEECCCCeeccCCccHHHHhccccccc
Confidence 466777663 444 445565 899999999999 777777665544333333333
Q ss_pred -cccCcEEEEEEccCCCEEEEEcCCceEEEEeccC
Q psy15549 79 -RHQKAVNVVRFSPNGELLASGDDVGKEIWYLTER 112 (621)
Q Consensus 79 -~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~ 112 (621)
.....|..+.++.+|.-|++-+++....|+..-+
T Consensus 63 ~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~L~ 97 (219)
T PF07569_consen 63 KSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPDLG 97 (219)
T ss_pred CCCCCcEEEEEEcCCCCEEEEEeCCCEEEeccccc
Confidence 4567889999999999998888888888887654
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=92.55 E-value=0.52 Score=29.53 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=25.8
Q ss_pred cceEEEEEcCCC---CEEEEEeCCCcEEEEEccC
Q psy15549 235 KFVQGVAWDPKN---QYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 235 ~~v~~l~~sp~~---~~l~s~~~dg~i~iwd~~~ 265 (621)
+.|+++.|+|.. .+|+.+-.-|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 468999999854 4788887789999999985
|
It contains a characteristic DLL sequence motif. |
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=92.19 E-value=23 Score=39.52 Aligned_cols=76 Identities=12% Similarity=0.165 Sum_probs=51.2
Q ss_pred CCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCc-----EEEEeccCC----------cceEEEEEcCCCCEEEEEeCC
Q psy15549 192 LEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGK-----NLGILTEHK----------KFVQGVAWDPKNQYVATLSSD 255 (621)
Q Consensus 192 ~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~-----~~~~~~~~~----------~~v~~l~~sp~~~~l~s~~~d 255 (621)
..+...++|+| +...||+....|...||++.... .......+. ..-..+.|.++-+.|++++ .
T Consensus 145 g~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~-r 223 (765)
T PF10214_consen 145 GFPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCN-R 223 (765)
T ss_pred CCccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEc-C
Confidence 34677899999 55789999999999999992111 111111111 2234788888877787665 4
Q ss_pred CcEEEEEccCcee
Q psy15549 256 RSLRTYSIQSKKV 268 (621)
Q Consensus 256 g~i~iwd~~~~~~ 268 (621)
..+.++|+.+...
T Consensus 224 ~~l~~~d~~~~~~ 236 (765)
T PF10214_consen 224 SKLMLIDFESNWQ 236 (765)
T ss_pred CceEEEECCCCCc
Confidence 5688999887654
|
These proteins are found in fungi. |
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=92.17 E-value=8.2 Score=34.42 Aligned_cols=162 Identities=15% Similarity=0.192 Sum_probs=82.2
Q ss_pred ccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC---C---cEEEE-EccCC-
Q psy15549 90 SPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE---S---TIIVW-KQKTD- 161 (621)
Q Consensus 90 spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d---g---~i~vw-d~~~~- 161 (621)
++.+.++++++...|.+|++..... .....+..- +.|..+.++..|+||++--.+ . .+|+| +.+..
T Consensus 26 ~g~d~Lfva~~g~~Vev~~l~~~~~-----~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~ 99 (215)
T PF14761_consen 26 GGPDALFVAASGCKVEVYDLEQEEC-----PLLCTFSTV-GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQK 99 (215)
T ss_pred cCCceEEEEcCCCEEEEEEcccCCC-----ceeEEEcch-hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhc
Confidence 3433444556677899999984322 334444332 689999999999999985322 2 56765 22222
Q ss_pred ---CCCC-CCCCCCcccc--cccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-E-----EE
Q psy15549 162 ---QDLP-EFPSSNLDEE--NVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN-L-----GI 229 (621)
Q Consensus 162 ---~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~-~-----~~ 229 (621)
..+. .+.+...... .......+ .....-...+.+++-.|-..-|+.|+ ++.+.+|.+..... . ..
T Consensus 100 ~~~~~v~vRiaG~~v~~~~~~~~~~qle--iiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~~~~~~~~~~lD 176 (215)
T PF14761_consen 100 EENSPVRVRIAGHRVTPSFNESSKDQLE--IIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQTIQSEKFSFLD 176 (215)
T ss_pred ccCCcEEEEEcccccccCCCCccccceE--EEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEEEEecccccEEe
Confidence 1111 0101000000 00000011 11112355678888888443455555 46788997754322 1 11
Q ss_pred ec----c-CC-cceEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15549 230 LT----E-HK-KFVQGVAWDPKNQYVATLSSDRSLRTYSI 263 (621)
Q Consensus 230 ~~----~-~~-~~v~~l~~sp~~~~l~s~~~dg~i~iwd~ 263 (621)
+. . |. -.+..+++. +.|+|..+ +-.++++.+
T Consensus 177 Fe~~l~~~~~~~~p~~v~ic--~~yiA~~s-~~ev~Vlkl 213 (215)
T PF14761_consen 177 FERSLIDHIDNFKPTQVAIC--EGYIAVMS-DLEVLVLKL 213 (215)
T ss_pred chhhhhheecCceEEEEEEE--eeEEEEec-CCEEEEEEE
Confidence 11 1 11 124555665 67787665 445666654
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=91.83 E-value=24 Score=38.99 Aligned_cols=62 Identities=8% Similarity=0.064 Sum_probs=42.4
Q ss_pred CCeEEEEECCCCcEEEEeccCCcce---------EEEEEcC-CCC---EEEEEeCCCcEEEEEccCceeeeeccc
Q psy15549 213 DNTAIMWDVHKGKNLGILTEHKKFV---------QGVAWDP-KNQ---YVATLSSDRSLRTYSIQSKKVISRACR 274 (621)
Q Consensus 213 dg~i~vwd~~~~~~~~~~~~~~~~v---------~~l~~sp-~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~ 274 (621)
.+.|.-.|+++|+....++.....+ .-+.+.. +|+ .++.++.+|.+.++|.++|+.+.....
T Consensus 413 ~~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~e 487 (764)
T TIGR03074 413 SSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVEE 487 (764)
T ss_pred cceEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeecee
Confidence 3567788999999887765421111 1122222 553 688899999999999999998876544
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=91.80 E-value=14 Score=39.35 Aligned_cols=63 Identities=16% Similarity=0.172 Sum_probs=32.6
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEE--eccCCcceEEEEEcCCCCEEEEEeCC------CcEEEEEccCce
Q psy15549 203 TSTHLISGSVD-----NTAIMWDVHKGKNLGI--LTEHKKFVQGVAWDPKNQYVATLSSD------RSLRTYSIQSKK 267 (621)
Q Consensus 203 d~~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~~~~l~s~~~d------g~i~iwd~~~~~ 267 (621)
++..++.|+.+ ..+..||..+.+-... +...... .+++ .-+++..+.|+.+ ..+..||..+.+
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~-~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~ 417 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYN-PCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNK 417 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCcc-ceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCe
Confidence 56777777765 3577788776543221 1111111 1122 2346666666632 346777776654
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=91.80 E-value=4.7 Score=43.07 Aligned_cols=121 Identities=11% Similarity=0.151 Sum_probs=74.0
Q ss_pred CcEEEEEEcc--CCCEEEEEc-CCceEEEEeccCcccc-------------ccceecccccccCCCeEEEEEC--CCCCE
Q psy15549 82 KAVNVVRFSP--NGELLASGD-DVGKEIWYLTERESGI-------------ANVEFASDLSRHQKAVNVVRFS--PNGEL 143 (621)
Q Consensus 82 ~~V~~l~~sp--dg~~las~~-d~~v~iw~~~~~~~~~-------------~~~~~~~~~~~h~~~V~~i~~s--p~g~~ 143 (621)
..|+.|.... +...|+.+. ||.|.+|....--... ....+...+ .-...+++++++ ...++
T Consensus 101 HtIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~-~v~~SaWGLdIh~~~~~rl 179 (717)
T PF08728_consen 101 HTINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHL-RVGASAWGLDIHDYKKSRL 179 (717)
T ss_pred ceeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEe-ecCCceeEEEEEecCcceE
Confidence 3466666554 334555555 7789999764311000 001111111 123478999998 77889
Q ss_pred EEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC---C---EEEEEeCCCeEE
Q psy15549 144 LASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS---T---HLISGSVDNTAI 217 (621)
Q Consensus 144 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~---~---~l~s~~~dg~i~ 217 (621)
||+++....|.||-+......... ..-..|...|-+|+|-++. . .|++++-.|.+.
T Consensus 180 IAVSsNs~~VTVFaf~l~~~r~~~------------------~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~ 241 (717)
T PF08728_consen 180 IAVSSNSQEVTVFAFALVDERFYH------------------VPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVW 241 (717)
T ss_pred EEEecCCceEEEEEEecccccccc------------------ccccccccCCCeeEeecCCCCCccceEEEEEeccCcEE
Confidence 999998888888866553211100 0012366778899997733 2 778888899999
Q ss_pred EEEC
Q psy15549 218 MWDV 221 (621)
Q Consensus 218 vwd~ 221 (621)
+|++
T Consensus 242 ~~~I 245 (717)
T PF08728_consen 242 TFKI 245 (717)
T ss_pred EEEE
Confidence 9887
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=91.56 E-value=14 Score=36.20 Aligned_cols=119 Identities=12% Similarity=0.177 Sum_probs=65.6
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCc------EEEEEccCCC-CCCCCCCCCc-ccccccccceeeeeeecCCCCCeEEEEE
Q psy15549 129 QKAVNVVRFSPNGELLASGDDEST------IIVWKQKTDQ-DLPEFPSSNL-DEENVNKEHWIVTKILRGHLEDVYDISW 200 (621)
Q Consensus 129 ~~~V~~i~~sp~g~~l~s~s~dg~------i~vwd~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 200 (621)
-+.+..+.+.+++..+++.+.+|. +..+++.... ....+..... ...... ...+........+|++
T Consensus 19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~------G~~~~~~~~D~Egi~~ 92 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPD------GQPFPKNGLDPEGIAV 92 (326)
T ss_pred cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCC------CCcCCcCCCChhHeEE
Confidence 356788999876566666677776 5555554411 1110000000 000000 0001111124567888
Q ss_pred CCCCCEEEEEeCC------CeEEEEECCCCcEEEEec---------------cCCcceEEEEEcCCCCEEEEEeC
Q psy15549 201 SPTSTHLISGSVD------NTAIMWDVHKGKNLGILT---------------EHKKFVQGVAWDPKNQYVATLSS 254 (621)
Q Consensus 201 spd~~~l~s~~~d------g~i~vwd~~~~~~~~~~~---------------~~~~~v~~l~~sp~~~~l~s~~~ 254 (621)
.++|.++++.-.+ ..|+.++.. |+.+..+. .....+.+|+++|+|+.|+++.+
T Consensus 93 ~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E 166 (326)
T PF13449_consen 93 PPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAME 166 (326)
T ss_pred ecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEEC
Confidence 7788877776666 788888865 65544331 13446789999999997776644
|
|
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=91.16 E-value=10 Score=33.48 Aligned_cols=70 Identities=13% Similarity=0.049 Sum_probs=39.9
Q ss_pred CCCEEEEEeC--CCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEE-EeCCCcEEEEEccCceeeeec
Q psy15549 203 TSTHLISGSV--DNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT-LSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 203 d~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s-~~~dg~i~iwd~~~~~~~~~~ 272 (621)
+|.++.+.+. ...|++||+.+++.+....-....+..=-...-|.++.. .=.+|.-.+||.++.+.+..+
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~ 127 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRF 127 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhccc
Confidence 5555666554 357999999999887655332111111001111333333 235788889998887766554
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.74 E-value=2.4 Score=41.67 Aligned_cols=167 Identities=14% Similarity=0.142 Sum_probs=96.6
Q ss_pred cccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCC----CeE-EEEECCCCCEEEEEeCCCcE
Q psy15549 79 RHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQK----AVN-VVRFSPNGELLASGDDESTI 153 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~----~V~-~i~~sp~g~~l~s~s~dg~i 153 (621)
.-...|..+-..|||+.|..-+...+.++++....-... +......+ .|+ .+..-..|..|+.++.||.|
T Consensus 218 ~~~~~v~qllL~Pdg~~LYv~~g~~~~v~~L~~r~l~~r-----kl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~v 292 (733)
T COG4590 218 VPFSDVSQLLLTPDGKTLYVRTGSELVVALLDKRSLQIR-----KLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLV 292 (733)
T ss_pred CCccchHhhEECCCCCEEEEecCCeEEEEeecccccchh-----hhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCce
Confidence 334567778889999999887778888998876532111 11111111 121 11223346678888899988
Q ss_pred EEE-EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc
Q psy15549 154 IVW-KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 154 ~vw-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 232 (621)
.-| |++.... ..+ ...+.+.-....+..+.--.+.+-+++-+..|++.++.....+.+ .+..
T Consensus 293 sQWFdvr~~~~-p~l---------------~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~l-L~~~ 355 (733)
T COG4590 293 SQWFDVRRDGQ-PHL---------------NHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLL-LFER 355 (733)
T ss_pred eeeeeeecCCC-Ccc---------------eeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcce-ehhh
Confidence 877 4443332 111 011222222233333333334456777788888888765433332 2222
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCcee
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV 268 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 268 (621)
.-..+.-+++||++.+|++- ..|.++++.+++...
T Consensus 356 ~~~~~~~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr~P 390 (733)
T COG4590 356 AYQAPQLVAMSPNQAYLLSE-DQGKIRLAQLENRNP 390 (733)
T ss_pred hhcCcceeeeCcccchheee-cCCceEEEEecCCCC
Confidence 23356778999999999854 457899998876543
|
|
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=90.32 E-value=7.9 Score=31.57 Aligned_cols=116 Identities=11% Similarity=0.073 Sum_probs=67.0
Q ss_pred EEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccccc-ceeeccccccccCcEEEEEEcc-----
Q psy15549 18 SVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIA-NVEFASDLSRHQKAVNVVRFSP----- 91 (621)
Q Consensus 18 ~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~-~~~~~~~~~~h~~~V~~l~~sp----- 91 (621)
.-.|....+ .|+.++..|.|. |++......... .-..++ +-.-...|++|+-.+
T Consensus 3 iGkfDG~~p-----cL~~aT~~gKV~--------------IH~ph~~~~~~~~~~~~i~-~LNin~~italaaG~l~~~~ 62 (136)
T PF14781_consen 3 IGKFDGVHP-----CLACATTGGKVF--------------IHNPHERGQRTGRQDSDIS-FLNINQEITALAAGRLKPDD 62 (136)
T ss_pred EEEeCCCce-----eEEEEecCCEEE--------------EECCCccccccccccCcee-EEECCCceEEEEEEecCCCC
Confidence 445666666 889999999998 666554322110 000011 222345677776443
Q ss_pred CCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECC---CCCEEEEEeCCCcEEEEEccCC
Q psy15549 92 NGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP---NGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 92 dg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp---~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
+...|+.|+...+..||+..... .+. +.-.+.|+++.+-. ...-|+..+.+..|.-||.+..
T Consensus 63 ~~D~LliGt~t~llaYDV~~N~d-----~Fy---ke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~ 127 (136)
T PF14781_consen 63 GRDCLLIGTQTSLLAYDVENNSD-----LFY---KEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGN 127 (136)
T ss_pred CcCEEEEeccceEEEEEcccCch-----hhh---hhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCc
Confidence 45689999999999999987642 111 22346677777632 1223444444556766665544
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=90.19 E-value=0.83 Score=48.72 Aligned_cols=71 Identities=15% Similarity=0.227 Sum_probs=46.4
Q ss_pred cCcEEEEEEcc---CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEE-----------ECCCCCEEE
Q psy15549 81 QKAVNVVRFSP---NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVR-----------FSPNGELLA 145 (621)
Q Consensus 81 ~~~V~~l~~sp---dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~-----------~sp~g~~l~ 145 (621)
...+.-+.|.| +.-++-.+. ++.+++..+.... ...+.+|...+..++ .+|||+.||
T Consensus 180 gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~--------~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a 251 (1283)
T KOG1916|consen 180 GSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRAL--------RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFA 251 (1283)
T ss_pred CCCcceeeecccccccceeeeccCCCceeEeeechHH--------HHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEE
Confidence 34445555655 444554554 6667777766532 244555776666555 488999999
Q ss_pred EEeCCCcEEEEEcc
Q psy15549 146 SGDDESTIIVWKQK 159 (621)
Q Consensus 146 s~s~dg~i~vwd~~ 159 (621)
.+..||.++.|.+.
T Consensus 252 ~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 252 WAISDGSVGFYQIY 265 (1283)
T ss_pred EeecCCccceeeee
Confidence 99999998888754
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=90.16 E-value=1.3 Score=40.25 Aligned_cols=64 Identities=13% Similarity=0.140 Sum_probs=49.2
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEE------ec-------ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFI------AN-------IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~------~~-------~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
.+.++++.+.+|.+++||+.+++.+... .. .....|..+.++.+|.-|++-+ +|..+.|+.+-+
T Consensus 21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L~ 97 (219)
T PF07569_consen 21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDLG 97 (219)
T ss_pred CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccccc
Confidence 5688999999999999999998754332 11 2456789999999998777765 578899987644
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >COG5290 IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=90.11 E-value=14 Score=39.49 Aligned_cols=94 Identities=18% Similarity=0.304 Sum_probs=51.4
Q ss_pred EEEECCCCCEEEEEeCCC-----cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE
Q psy15549 134 VVRFSPNGELLASGDDES-----TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 134 ~i~~sp~g~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~ 208 (621)
.+.|-|+|..+++-+.|| .|..+.-..-+ ...+ ..-.+-...+..++|+-....++
T Consensus 251 ~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLr-HGef------------------~lr~~~dEk~~~~~wn~~s~vla 311 (1243)
T COG5290 251 QLSWKPQGSKYATIGTDGCSTSESVIFFERNGLR-HGEF------------------DLRVGCDEKAFLENWNLLSTVLA 311 (1243)
T ss_pred ccccccCCceeeeeccCCCCCcceEEEEccCCcc-cCCc------------------cccCCchhhhhhhhhhHHHHHHH
Confidence 478999999999977554 35555422211 1111 01112333456677776555555
Q ss_pred EEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC
Q psy15549 209 SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247 (621)
Q Consensus 209 s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~ 247 (621)
.+ ..+.+.+|-..+-.-.....-.-..+.-+.|+|...
T Consensus 312 v~-~~n~~~lwttkNyhWYLK~e~~ip~~s~vkwhpe~~ 349 (1243)
T COG5290 312 VA-EGNLLKLWTTKNYHWYLKVERQIPGISYVKWHPEEK 349 (1243)
T ss_pred Hh-hcceEEEEEccceEEEEEEeecCCCcceeeeccccC
Confidence 43 356799997654432222222334466788998543
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=90.11 E-value=10 Score=40.15 Aligned_cols=53 Identities=19% Similarity=0.202 Sum_probs=38.9
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec--cCCcceEEEEEcCC
Q psy15549 192 LEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT--EHKKFVQGVAWDPK 245 (621)
Q Consensus 192 ~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~~l~~sp~ 245 (621)
...+.-+..||+.++|+--...|.|.+-+++..++...+. .|.. ...++|.-+
T Consensus 216 ~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~-p~qm~Wcgn 270 (829)
T KOG2280|consen 216 NSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDP-PKQMAWCGN 270 (829)
T ss_pred CceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCc-hHhceeecC
Confidence 3568889999999999999999999999888777666654 2222 235666543
|
|
| >PF04192 Utp21: Utp21 specific WD40 associated putative domain ; InterPro: IPR007319 A large ribonuclear protein complex is required for the processing of the small-ribosomal-subunit rRNA - the small-subunit (SSU) processome [, ] | Back alignment and domain information |
|---|
Probab=89.67 E-value=0.18 Score=46.13 Aligned_cols=38 Identities=26% Similarity=0.187 Sum_probs=27.5
Q ss_pred CCCceEEEEEecCCcccchhhHHHHHHHhhhcchhhhc
Q psy15549 575 KTPRRVQLITLSSPNRKRKQDEEKIRETIKENDAKKAC 612 (621)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (621)
+.+-...|||||.-++.+|+....|..|.+||++|++-
T Consensus 22 ~~Qi~~~LiTLS~lP~srWq~Ll~LD~IK~RNKPkepp 59 (237)
T PF04192_consen 22 PEQIDEDLITLSGLPRSRWQNLLNLDVIKERNKPKEPP 59 (237)
T ss_pred hhhhCccceeeccCCHHHHHHHHHHHHHHHhCCCCCCC
Confidence 33444689999997777766666666666789988754
|
This preribosomal complex contains the U3 snoRNA and at least 40 proteins, which have the following properties: They are nucleolar. They are able to coimmunoprecipitate with the U3 snoRNA and Mpp10 (a protein specific to the SSU processome). They are required for 18S rRNA biogenesis. There appears to be a linkage between polymerase I transcription and the formation of the SSU processome; as some, but not all, of the SSU processome components are required for pre-rRNA transcription initiation. These SSU processome components have been termed t-Utps. They form a pre-complex with pre-18S rRNA in the absence of snoRNA U3 and other SSU processome components. It has been proposed that the t-Utp complex proteins are both rDNA and rRNA binding proteins that are involved in the initiation of pre18S rRNA transcription. Initially binding to rDNA then associating with the 5' end of the nascent pre18S rRNA. The t-Utpcomplex forms the nucleus around which the rest of the SSU processome components, including snoRNA U3, assemble []. From electron microscopy the SSU processome may correspond to the terminal knobs visualized at the 5' ends of nascent 18S rRNA. Utp21 is a component of the SSU processome, which is required for pre-18S rRNA processing. It interacts with Utp18 [].; GO: 0006364 rRNA processing, 0032040 small-subunit processome |
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=89.37 E-value=14 Score=34.08 Aligned_cols=151 Identities=15% Similarity=0.164 Sum_probs=73.0
Q ss_pred eEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEcC----CceEEEEeccCccccccceecccccccCCCeE
Q psy15549 58 IWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD----VGKEIWYLTERESGIANVEFASDLSRHQKAVN 133 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~d----~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 133 (621)
+||+.++..... . + ...-...+=.|-+||++|.+|++ ..+++++.........-.+....+. ....--
T Consensus 50 ~yD~~tn~~rpl-----~-v-~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~-~~RWYp 121 (243)
T PF07250_consen 50 EYDPNTNTFRPL-----T-V-QTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQ-SGRWYP 121 (243)
T ss_pred EEecCCCcEEec-----c-C-CCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECccccc-CCCccc
Confidence 888887654321 0 1 11122233357789999999872 3467777544111000011111121 122223
Q ss_pred EEEECCCCCEEEEEeCCC-cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeec-CCCCC-eEEEEECCCCCEEEEE
Q psy15549 134 VVRFSPNGELLASGDDES-TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR-GHLED-VYDISWSPTSTHLISG 210 (621)
Q Consensus 134 ~i~~sp~g~~l~s~s~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-v~~i~~spd~~~l~s~ 210 (621)
....-|||+.|+.|+... +..+|.-...... ...+....... ..... ---+...|+|++|+.+
T Consensus 122 T~~~L~DG~vlIvGG~~~~t~E~~P~~~~~~~--------------~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~a 187 (243)
T PF07250_consen 122 TATTLPDGRVLIVGGSNNPTYEFWPPKGPGPG--------------PVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFA 187 (243)
T ss_pred cceECCCCCEEEEeCcCCCcccccCCccCCCC--------------ceeeecchhhhccCccccCceEEEcCCCCEEEEE
Confidence 344567999999888763 2223322111000 00000000000 01111 1245667899999988
Q ss_pred eCCCeEEEEECCCCcEEEEecc
Q psy15549 211 SVDNTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 211 ~~dg~i~vwd~~~~~~~~~~~~ 232 (621)
..+. .|||..+.+.++.+..
T Consensus 188 n~~s--~i~d~~~n~v~~~lP~ 207 (243)
T PF07250_consen 188 NRGS--IIYDYKTNTVVRTLPD 207 (243)
T ss_pred cCCc--EEEeCCCCeEEeeCCC
Confidence 8654 5678887776666643
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=89.33 E-value=1.9 Score=37.68 Aligned_cols=30 Identities=23% Similarity=0.311 Sum_probs=25.1
Q ss_pred CeEEEEECCCC------CEEEEEeCCCcEEEEEccC
Q psy15549 131 AVNVVRFSPNG------ELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 131 ~V~~i~~sp~g------~~l~s~s~dg~i~vwd~~~ 160 (621)
.|..++|||.| -+||+.+.++.|.||....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 78999999954 2888999999999998654
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.29 E-value=19 Score=33.72 Aligned_cols=195 Identities=14% Similarity=0.086 Sum_probs=109.4
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
+-+..+.|+.+ +...+..+.-++ |.|+.+...... ...+.- .+--.++ .-.|
T Consensus 87 ~l~~Dv~vse~-------yvyvad~ssGL~--------------IvDIS~P~sP~~----~~~lnt-~gyaygv--~vsG 138 (370)
T COG5276 87 DLFADVRVSEE-------YVYVADWSSGLR--------------IVDISTPDSPTL----IGFLNT-DGYAYGV--YVSG 138 (370)
T ss_pred hhhheeEeccc-------EEEEEcCCCceE--------------EEeccCCCCcce----eccccC-CceEEEE--EecC
Confidence 34555666654 555555666677 677766554332 111111 1223333 4458
Q ss_pred CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 94 ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 94 ~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
+++..+. +++..+.|+...... ....+.......-..++.| |++-..+..|+-+.+-|+.......-
T Consensus 139 n~aYVadlddgfLivdvsdpssP----~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvl------ 206 (370)
T COG5276 139 NYAYVADLDDGFLIVDVSDPSSP----QLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVL------ 206 (370)
T ss_pred CEEEEeeccCcEEEEECCCCCCc----eeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeE------
Confidence 8888887 999999999877543 2233333333444556664 66777777888899999987764311
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec--cCCc--ceEEEEEcCCCCE
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT--EHKK--FVQGVAWDPKNQY 248 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~--~v~~l~~sp~~~~ 248 (621)
.........++++..+++.-+++... --+.+-|..+.+....+- .... .++.+..+ +++
T Consensus 207 -------------i~~~n~g~g~~sv~vsdnr~y~vvy~--egvlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs--~~~ 269 (370)
T COG5276 207 -------------IGSYNTGPGTYSVSVSDNRAYLVVYD--EGVLIVDVSGPSSPTVFGSYETSNPVSISTVPVS--GEY 269 (370)
T ss_pred -------------EEEEecCCceEEEEecCCeeEEEEcc--cceEEEecCCCCCceEeeccccCCcccccceecc--cce
Confidence 11112233678888887765555443 346677776655333331 1111 22223333 666
Q ss_pred EEEEeCCCcEEEEEccC
Q psy15549 249 VATLSSDRSLRTYSIQS 265 (621)
Q Consensus 249 l~s~~~dg~i~iwd~~~ 265 (621)
...+..+.-+.+-|+..
T Consensus 270 ~Yvadga~gl~~idisn 286 (370)
T COG5276 270 AYVADGAKGLPIIDISN 286 (370)
T ss_pred eeeeccccCceeEeccC
Confidence 66666666666666643
|
|
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=89.27 E-value=41 Score=37.52 Aligned_cols=172 Identities=16% Similarity=0.233 Sum_probs=102.2
Q ss_pred cccCcEEEEEEc---c----CCCEEEEEcCCceEEEEeccC------cc--ccccceecccccc---cCCCeEEEEECC-
Q psy15549 79 RHQKAVNVVRFS---P----NGELLASGDDVGKEIWYLTER------ES--GIANVEFASDLSR---HQKAVNVVRFSP- 139 (621)
Q Consensus 79 ~h~~~V~~l~~s---p----dg~~las~~d~~v~iw~~~~~------~~--~~~~~~~~~~~~~---h~~~V~~i~~sp- 139 (621)
.-..+|..|+|+ . ..++|++=....+.|+...-. .. ......++..+.. ...+...++|+|
T Consensus 77 ~~~~PI~qI~fa~~~~~~~~~~~~l~Vrt~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP~ 156 (765)
T PF10214_consen 77 DDGSPIKQIKFATLSESFDEKSRWLAVRTETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNPW 156 (765)
T ss_pred CCCCCeeEEEecccccccCCcCcEEEEEcCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEeccC
Confidence 456789999998 2 235788877788888872221 11 1111222333322 234667899999
Q ss_pred CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecC-------CCCCeEEEEECCCCCEEEEEeC
Q psy15549 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRG-------HLEDVYDISWSPTSTHLISGSV 212 (621)
Q Consensus 140 ~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~i~~spd~~~l~s~~~ 212 (621)
+.+.||.....|.-.||++........ ..|.......+ .......+.|.++.+.|+.++.
T Consensus 157 ~~~q~AiVD~~G~Wsvw~i~~~~~~~~-------------~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r 223 (765)
T PF10214_consen 157 DQRQFAIVDEKGNWSVWDIKGRPKRKS-------------SNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR 223 (765)
T ss_pred ccceEEEEeccCcEEEEEeccccccCC-------------cceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC
Confidence 556999999999999999932221110 00000000001 1144567899988888888874
Q ss_pred CCeEEEEECCCCcEEE-Ee-ccCCcceEEEEEcCCC-CEEEEEeCCCcEEEEEccC
Q psy15549 213 DNTAIMWDVHKGKNLG-IL-TEHKKFVQGVAWDPKN-QYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 213 dg~i~vwd~~~~~~~~-~~-~~~~~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~ 265 (621)
..+.++|+.+..... .. ......|..+.-+|.. .+++.. ....|...++..
T Consensus 224 -~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiL-Ts~eiiw~~~~~ 277 (765)
T PF10214_consen 224 -SKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFIL-TSKEIIWLDVKS 277 (765)
T ss_pred -CceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEE-ecCeEEEEEccC
Confidence 568999998776533 21 2244678888888862 222222 235677777766
|
These proteins are found in fungi. |
| >PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[] | Back alignment and domain information |
|---|
Probab=88.69 E-value=44 Score=37.13 Aligned_cols=86 Identities=22% Similarity=0.183 Sum_probs=51.0
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeE
Q psy15549 235 KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL 314 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l 314 (621)
..|.++....-+.+++.+-.||+|.++|..+.+.+........+........+.- |..... ..+..++|||.+..+
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~G---f~fp~~-~~~~~vafSPt~c~~ 335 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAG---FHFPCI-QPPLHVAFSPTMCSL 335 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccc---cccccC-CCCceEEECcccceE
Confidence 4566777777778899999999999999998876655410000000000000000 011111 144568999999888
Q ss_pred EeccccccCCCCCCc
Q psy15549 315 IAPSGCLENSDSTRK 329 (621)
Q Consensus 315 ~~~s~~~~~~d~~i~ 329 (621)
+... .++.+.
T Consensus 336 v~~~-----~~~~~~ 345 (753)
T PF11635_consen 336 VQID-----EDGKTK 345 (753)
T ss_pred EEEe-----cCCCce
Confidence 8877 566655
|
It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM. |
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=88.55 E-value=31 Score=35.26 Aligned_cols=58 Identities=9% Similarity=-0.020 Sum_probs=36.9
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecc-ccc-ccCCCeEEEEECCCC
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFAS-DLS-RHQKAVNVVRFSPNG 141 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~-~~~-~h~~~V~~i~~sp~g 141 (621)
..-..|+|.|||++|++-- .+.|++++....... .+..+. ... ...+....|+|+|+-
T Consensus 30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~--~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEVK--VVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCcee--eeecCCceeccCCCCceeeEEECCCc
Confidence 4578899999999998877 588888865433211 001111 111 135778999999873
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12 | Back alignment and domain information |
|---|
Probab=88.03 E-value=25 Score=33.61 Aligned_cols=197 Identities=15% Similarity=0.120 Sum_probs=90.9
Q ss_pred eEEEEECCCCcEEEEecc------CCcceEEEEEcCCC-----CEEEEE-eCCCcEEEEEccCceeeeecccCCCCCCCc
Q psy15549 215 TAIMWDVHKGKNLGILTE------HKKFVQGVAWDPKN-----QYVATL-SSDRSLRTYSIQSKKVISRACRSKLPVDSS 282 (621)
Q Consensus 215 ~i~vwd~~~~~~~~~~~~------~~~~v~~l~~sp~~-----~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 282 (621)
.|.+||+.+++.++++.- ..+.+..+.+.... .+++.+ +..+-|-++|+.+++.-+.+.....+.+..
T Consensus 35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~ 114 (287)
T PF03022_consen 35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDA 114 (287)
T ss_dssp EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SS
T ss_pred EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccc
Confidence 678888888887776632 24567778777632 233333 334679999999998776665433322211
Q ss_pred cccccccccccccCCcccceeeeeecC---CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeee
Q psy15549 283 HELFDKVVPLFHDDTMKSFFRRLTFSP---DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAV 359 (621)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~i~~~~~sp---dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (621)
........ .+. ....+..++.+| +|++|+... -...++|.+.............. .....+..+
T Consensus 115 ~~~~i~g~-~~~---~~dg~~gial~~~~~d~r~LYf~~------lss~~ly~v~T~~L~~~~~~~~~---~~~~~v~~l 181 (287)
T PF03022_consen 115 GPFTIGGE-SFQ---WPDGIFGIALSPISPDGRWLYFHP------LSSRKLYRVPTSVLRDPSLSDAQ---ALASQVQDL 181 (287)
T ss_dssp EEEEETTE-EEE---ETTSEEEEEE-TTSTTS-EEEEEE------TT-SEEEEEEHHHHCSTT--HHH----HHHT-EEE
T ss_pred cceeccCc-eEe---cCCCccccccCCCCCCccEEEEEe------CCCCcEEEEEHHHhhCccccccc---cccccceec
Confidence 11111111 111 112256677765 777777554 11122333221111110000000 000001110
Q ss_pred eccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc---eeEEE-eccc-ccceEEEEEcC--CCCeEEEE
Q psy15549 360 KCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS---PFAFI-ANIH-YTKLTDITWSS--DGKVLIAS 430 (621)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~-~~~h-~~~v~~~~~sp--dg~~l~s~ 430 (621)
.- .........+...|..+++--..+.|..|+..+.- ....+ .... -..+.++.+.+ +|.+.+.+
T Consensus 182 G~------k~~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~s 253 (287)
T PF03022_consen 182 GD------KGSQSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLS 253 (287)
T ss_dssp EE---------SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred cc------cCCCCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEE
Confidence 00 00011112233355666677778899999988721 11222 1222 35678899988 77655544
|
5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B. |
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=88.03 E-value=4.4 Score=40.78 Aligned_cols=80 Identities=23% Similarity=0.334 Sum_probs=55.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEEC---------CCCcEEEE---e--------ccCCcceEEEEEcCCC---CEE
Q psy15549 193 EDVYDISWSPTSTHLISGSVDNTAIMWDV---------HKGKNLGI---L--------TEHKKFVQGVAWDPKN---QYV 249 (621)
Q Consensus 193 ~~v~~i~~spd~~~l~s~~~dg~i~vwd~---------~~~~~~~~---~--------~~~~~~v~~l~~sp~~---~~l 249 (621)
-.|..+..++.|..++..+.+|.+.++=. ++|+.... + ....-.+..++|+|+. ..|
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL 183 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL 183 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence 35778889999999999998997665531 23322211 1 1112246688999976 678
Q ss_pred EEEeCCCcEEEEEccCceeeeec
Q psy15549 250 ATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 250 ~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
..-+.|..||+||+...+.+...
T Consensus 184 ~iL~sdnviRiy~lS~~telylq 206 (741)
T KOG4460|consen 184 VLLTSDNVIRIYSLSEPTELYLQ 206 (741)
T ss_pred EEEecCcEEEEEecCCcchhhcc
Confidence 88899999999999876665433
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=87.90 E-value=9.7 Score=38.36 Aligned_cols=108 Identities=17% Similarity=0.202 Sum_probs=67.6
Q ss_pred EEEEccCC--------CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECC----CCCEEEEEeCCCcE
Q psy15549 86 VVRFSPNG--------ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP----NGELLASGDDESTI 153 (621)
Q Consensus 86 ~l~~spdg--------~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp----~g~~l~s~s~dg~i 153 (621)
-+.|.|+. +.|+..++.+|.-.|....+.... + ......++.-.|+. ...|+|.++..|-|
T Consensus 513 vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~----v---~esKdY~tKn~Fss~~tTesGyIa~as~kGDi 585 (776)
T COG5167 513 VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIK----V---VESKDYKTKNKFSSGMTTESGYIAAASRKGDI 585 (776)
T ss_pred eeecCCchhHHhcCccceEEeecccceEEecccccCCcee----e---eeehhccccccccccccccCceEEEecCCCce
Confidence 45666643 456666777776666554432110 0 01112222233332 34599999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH 222 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~ 222 (621)
++||--..... ..+.+....|..+..+.+|+++++.+. ..+.+.|+.
T Consensus 586 rLyDRig~rAK---------------------talP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~ 632 (776)
T COG5167 586 RLYDRIGKRAK---------------------TALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVP 632 (776)
T ss_pred eeehhhcchhh---------------------hcCcccccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence 99995544432 445677888999999999999887774 456676653
|
|
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=87.67 E-value=6.6 Score=34.28 Aligned_cols=30 Identities=17% Similarity=0.329 Sum_probs=24.8
Q ss_pred CCeEEEEECCCC------CEEEEEeCCCeEEEEECC
Q psy15549 193 EDVYDISWSPTS------THLISGSVDNTAIMWDVH 222 (621)
Q Consensus 193 ~~v~~i~~spd~------~~l~s~~~dg~i~vwd~~ 222 (621)
..|..++|||.| .+|++.+.++.|.||...
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 379999999954 478888899999999764
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=87.39 E-value=15 Score=41.62 Aligned_cols=159 Identities=13% Similarity=0.126 Sum_probs=90.6
Q ss_pred EEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEE--------CCCCCEEEEEeCCCcEEEEEc
Q psy15549 87 VRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRF--------SPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 87 l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~--------sp~g~~l~s~s~dg~i~vwd~ 158 (621)
+-+-|.=...-..-|+.+.+|+...+. ....+.+-...|..+.. -|.=++++.-+.--.|.++-+
T Consensus 84 mGiFpeI~RaWiTiDn~L~lWny~~~~-------e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV 156 (1311)
T KOG1900|consen 84 MGIFPEIGRAWITIDNNLFLWNYESDN-------ELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGV 156 (1311)
T ss_pred eccchhhcceEEEeCCeEEEEEcCCCC-------ccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEE
Confidence 334454444445568899999999853 23344444455555543 333334444444445777655
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEE--EECCCC---c-E------
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIM--WDVHKG---K-N------ 226 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~v--wd~~~~---~-~------ 226 (621)
.-........ .+............|.|+....+|+.+++| .||.|+- |....+ + +
T Consensus 157 ~~~~~~~~~~------------~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G-~dg~lyEl~Yq~~~gWf~~rc~Kiclt 223 (1311)
T KOG1900|consen 157 SFDEFTGELS------------IFNTSFKISVDGVSVNCITYTENGRIFFAG-RDGNLYELVYQAEDGWFGSRCRKICLT 223 (1311)
T ss_pred EeccccCccc------------ccccceeeecCCceEEEEEeccCCcEEEee-cCCCEEEEEEeccCchhhcccccccCc
Confidence 4332211110 000001223346678999977788766655 5664432 222221 1 1
Q ss_pred ----------EEEec-cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q psy15549 227 ----------LGILT-EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 227 ----------~~~~~-~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~ 265 (621)
+-.+. .+..+|..++.....+.+.+-+..|+|.+||+..
T Consensus 224 ~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 224 KSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred hhHHHHhhhhhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 11122 4567899999988888999999999999999976
|
|
| >KOG1898|consensus | Back alignment and domain information |
|---|
Probab=87.20 E-value=55 Score=36.56 Aligned_cols=57 Identities=9% Similarity=0.123 Sum_probs=35.0
Q ss_pred EEEEEcCCcEEEEeCCCCceeEEEeccc-ccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 384 VIAVATENNILLYDTQHASPFAFIANIH-YTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 384 l~~~~~dg~i~iwd~~~~~~~~~~~~~h-~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
.+-++-...+++||+...++++.....+ ...|+.+.+ .+..++.|..--.|.++.+.
T Consensus 947 ~~LagvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt--~~~RI~VgD~qeSV~~~~y~ 1004 (1205)
T KOG1898|consen 947 RVLAGVGRFLRLYDLGKKKLLRKCELKFIPNRISSIQT--YGARIVVGDIQESVHFVRYR 1004 (1205)
T ss_pred EEEEecccEEEEeeCChHHHHhhhhhccCceEEEEEee--cceEEEEeeccceEEEEEEe
Confidence 4445566789999998877666543323 445667766 34567777654455554444
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=86.63 E-value=14 Score=37.36 Aligned_cols=148 Identities=7% Similarity=0.027 Sum_probs=83.3
Q ss_pred ccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCC-------EEEEEeCCCcEEEEEccC
Q psy15549 90 SPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE-------LLASGDDESTIIVWKQKT 160 (621)
Q Consensus 90 spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~-------~l~s~s~dg~i~vwd~~~ 160 (621)
..|..+|..-+ .+.+.-.|+..+ +.+....-|... -+.|.|+.+ .-+.|-.+..|.-.|.+-
T Consensus 476 ~~dssli~~dg~~~~kLykmDIErG-------kvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~ 546 (776)
T COG5167 476 DNDSSLIYLDGGERDKLYKMDIERG-------KVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRA 546 (776)
T ss_pred cCCcceEEecCCCcccceeeecccc-------eeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccc
Confidence 34555555543 444555555555 555555555544 467777432 123344455565556543
Q ss_pred CCC-CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEE
Q psy15549 161 DQD-LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQG 239 (621)
Q Consensus 161 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 239 (621)
... +... ..+. ........+..-. ...++|.++..|.|++||--.......+.+....|..
T Consensus 547 ~gNKi~v~----------------esKd-Y~tKn~Fss~~tT-esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~ 608 (776)
T COG5167 547 RGNKIKVV----------------ESKD-YKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKH 608 (776)
T ss_pred cCCceeee----------------eehh-ccccccccccccc-cCceEEEecCCCceeeehhhcchhhhcCcccccceee
Confidence 321 1000 0000 1112223333333 3459999999999999995433344455667788999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEccC
Q psy15549 240 VAWDPKNQYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 240 l~~sp~~~~l~s~~~dg~i~iwd~~~ 265 (621)
+..+.+|+++++.+. ..+.+-|++-
T Consensus 609 idvta~Gk~ilaTCk-~yllL~d~~i 633 (776)
T COG5167 609 IDVTANGKHILATCK-NYLLLTDVPI 633 (776)
T ss_pred eEeecCCcEEEEeec-ceEEEEeccc
Confidence 999999999876654 4677777653
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=86.38 E-value=34 Score=35.68 Aligned_cols=64 Identities=6% Similarity=-0.024 Sum_probs=34.3
Q ss_pred CCCEEEEEeCC--CeEEEEECCCCcEEE--EeccCCcceEEEEEcCCCCEEEEEeCCC---cEEEEEccCcee
Q psy15549 203 TSTHLISGSVD--NTAIMWDVHKGKNLG--ILTEHKKFVQGVAWDPKNQYVATLSSDR---SLRTYSIQSKKV 268 (621)
Q Consensus 203 d~~~l~s~~~d--g~i~vwd~~~~~~~~--~~~~~~~~v~~l~~sp~~~~l~s~~~dg---~i~iwd~~~~~~ 268 (621)
++.+.+.|+.+ ..+..||..+.+-.. .+.........+ .-+|+..+.|+.++ .+..||..+.+-
T Consensus 318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~--~~~g~IYviGG~~~~~~~ve~ydp~~~~W 388 (480)
T PHA02790 318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVA--SINNVIYVIGGHSETDTTTEYLLPNHDQW 388 (480)
T ss_pred CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEE--EECCEEEEecCcCCCCccEEEEeCCCCEE
Confidence 67777777754 357788876553221 111111111122 23467777777653 467788766543
|
|
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=86.13 E-value=24 Score=40.29 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=27.8
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC
Q psy15549 190 GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH 222 (621)
Q Consensus 190 ~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~ 222 (621)
+.......++|+|.-.+++.++..|.|++|-..
T Consensus 33 G~~~~~~~~afD~~q~llai~t~tg~i~~yg~~ 65 (993)
T KOG1983|consen 33 GFPSTPSALAFDPTQGLLAIGTRTGAIKIYGQP 65 (993)
T ss_pred CCCCCCcceeeccccceEEEEEecccEEEeccc
Confidence 444566789999999999999999999999754
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=86.04 E-value=41 Score=33.93 Aligned_cols=61 Identities=15% Similarity=0.236 Sum_probs=37.5
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCCCcE--EEEeccCCcceEEEEEcCCCCEEEEEeCCCcE
Q psy15549 195 VYDISWSPTSTHLISGSVDNTAIMWDVHKGKN--LGILTEHKKFVQGVAWDPKNQYVATLSSDRSL 258 (621)
Q Consensus 195 v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i 258 (621)
...+..++|+.+++.+.....++-||- +.. ...-......++.+.|.+++..++++ ..|.+
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~--G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l 303 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEP--GQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGL 303 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCC--CCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceE
Confidence 555677888887777765443444543 322 11122335568899999999877755 56654
|
|
| >PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[] | Back alignment and domain information |
|---|
Probab=85.44 E-value=66 Score=35.79 Aligned_cols=128 Identities=14% Similarity=0.082 Sum_probs=75.3
Q ss_pred CeEEEEECC----C---CCEEEEEeC----CCcEEEEEccCCCCCC--CCCCCC---cc-cccccccceeeeeeecCCCC
Q psy15549 131 AVNVVRFSP----N---GELLASGDD----ESTIIVWKQKTDQDLP--EFPSSN---LD-EENVNKEHWIVTKILRGHLE 193 (621)
Q Consensus 131 ~V~~i~~sp----~---g~~l~s~s~----dg~i~vwd~~~~~~~~--~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~ 193 (621)
.++.+.|-+ . -..|++.+. ...|..|.+......- .|.... .. ........|.....+. ...
T Consensus 182 ~LthL~ils~~~~~~~~p~Ili~~~~~~~~~SiI~RweL~~~~~~lh~~F~ql~s~~~~~~~~~~~~~l~~~~~i~-~~~ 260 (753)
T PF11635_consen 182 QLTHLEILSPTPDKDSAPEILIVYSSPNTPSSIIERWELREEQQPLHPAFQQLGSKKNSSSEPPPTYRLRRLDDIT-LNK 260 (753)
T ss_pred cceeEEEeccCCCCCCCCeEEEEEEcCCCCCcEEEEEEEEccCcccchhhhhcCCCCcCCCCCCCceeEEEecccc-cCC
Confidence 566777754 1 124444432 3479999988765221 111110 00 1111122232222222 345
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe----cc---------------CCcceEEEEEcCCCCEEEEEeC
Q psy15549 194 DVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL----TE---------------HKKFVQGVAWDPKNQYVATLSS 254 (621)
Q Consensus 194 ~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~----~~---------------~~~~v~~l~~sp~~~~l~s~~~ 254 (621)
.|.+++...-+.+++....||+|.++|-.+.+.+... .. .-..+..++|||.+.-++....
T Consensus 261 ~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~~ 340 (753)
T PF11635_consen 261 RVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQIDE 340 (753)
T ss_pred eEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEec
Confidence 6888888888889999999999999998776544333 10 1112345789999999998888
Q ss_pred CCcEE
Q psy15549 255 DRSLR 259 (621)
Q Consensus 255 dg~i~ 259 (621)
+|.+.
T Consensus 341 ~~~~~ 345 (753)
T PF11635_consen 341 DGKTK 345 (753)
T ss_pred CCCce
Confidence 98866
|
It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM. |
| >KOG4659|consensus | Back alignment and domain information |
|---|
Probab=85.35 E-value=77 Score=36.46 Aligned_cols=81 Identities=20% Similarity=0.195 Sum_probs=42.8
Q ss_pred EEEEEcCCCCEEEEEeCCCc-EEEEEccCceeeeecccCCCCCCCccccccccc---cccccCCcccceeeeeecCCCCe
Q psy15549 238 QGVAWDPKNQYVATLSSDRS-LRTYSIQSKKVISRACRSKLPVDSSHELFDKVV---PLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
.+++++++|...++-+.... =++--+.+...+..+.+...+............ ..+....+-..+.+++.+|||..
T Consensus 596 r~Iavg~~G~lyvaEsD~rriNrvr~~~tdg~i~ilaGa~S~C~C~~~~~cdcfs~~~~~At~A~lnsp~alaVsPdg~v 675 (1899)
T KOG4659|consen 596 RDIAVGTDGALYVAESDGRRINRVRKLSTDGTISILAGAKSPCSCDVAACCDCFSLRDVAATQAKLNSPYALAVSPDGDV 675 (1899)
T ss_pred hceeecCCceEEEEeccchhhhheEEeccCceEEEecCCCCCCCcccccCCccccccchhhhccccCCcceEEECCCCcE
Confidence 57888888876554433222 123333344455555555554443332211111 11222333445689999999998
Q ss_pred EEecc
Q psy15549 314 LIAPS 318 (621)
Q Consensus 314 l~~~s 318 (621)
+++-.
T Consensus 676 ~IAD~ 680 (1899)
T KOG4659|consen 676 IIADS 680 (1899)
T ss_pred EEecC
Confidence 88755
|
|
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=85.19 E-value=22 Score=40.52 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=30.6
Q ss_pred ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 410 IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 410 ~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
.+..+|..++....-..|.+-+..|+|.+|++..
T Consensus 240 ~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 240 SSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 4678999999988888899999999999999986
|
|
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=84.87 E-value=5.3 Score=24.75 Aligned_cols=40 Identities=25% Similarity=0.287 Sum_probs=27.7
Q ss_pred CCCCEEEEEeC-CCeEEEEECCCCcEEEEeccCCcceEEEEE
Q psy15549 202 PTSTHLISGSV-DNTAIMWDVHKGKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 202 pd~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~ 242 (621)
|++++|+++.. ++.|.++|..+++.+..+... .....++|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg-~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG-GYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC-CCCceEEe
Confidence 57777776654 789999999988887777542 33344544
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=84.67 E-value=29 Score=31.07 Aligned_cols=125 Identities=10% Similarity=0.127 Sum_probs=68.4
Q ss_pred CEEEEEeCCCeEEEEECC--CCcEEEEeccCCcceEEEEEcCCCCEEEEEeCC---C---cEEEE-EccCc----eeee-
Q psy15549 205 THLISGSVDNTAIMWDVH--KGKNLGILTEHKKFVQGVAWDPKNQYVATLSSD---R---SLRTY-SIQSK----KVIS- 270 (621)
Q Consensus 205 ~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~d---g---~i~iw-d~~~~----~~~~- 270 (621)
..|+.+...+.|.+|++. ..+...+|.. -+.|..+.++..|+||++--.+ . .+|+| +.+.. ..+.
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v 107 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV 107 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence 345454667889999998 3445566653 4788999999999999987543 2 56665 22221 2222
Q ss_pred ecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeee
Q psy15549 271 RACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFT 338 (621)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~ 338 (621)
++.++.......... .....+. .-+......+++-.|-.--|++++ ++.+.+|.+.....
T Consensus 108 RiaG~~v~~~~~~~~-~~qleii-ElPl~~~p~ciaCC~~tG~LlVg~------~~~l~lf~l~~~~~ 167 (215)
T PF14761_consen 108 RIAGHRVTPSFNESS-KDQLEII-ELPLSEPPLCIACCPVTGNLLVGC------GNKLVLFTLKYQTI 167 (215)
T ss_pred EEcccccccCCCCcc-ccceEEE-EecCCCCCCEEEecCCCCCEEEEc------CCEEEEEEEEEEEE
Confidence 222221111111000 0011111 122344567788877544444444 67888888765443
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=84.45 E-value=14 Score=37.47 Aligned_cols=98 Identities=20% Similarity=0.223 Sum_probs=56.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeee--cCCCCCeEEEEECCCC--
Q psy15549 129 QKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL--RGHLEDVYDISWSPTS-- 204 (621)
Q Consensus 129 ~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~spd~-- 204 (621)
...|..+..++.|..++-.|.+|.+.++=.+.-.....+...+ ...+++...+...+ ....-.+..++|+|+.
T Consensus 103 ~feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk---~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~ 179 (741)
T KOG4460|consen 103 LFEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGK---STVNCRTTPVAERFFTSSTSLTLKQAAWHPSSIL 179 (741)
T ss_pred eEEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCC---ceEEEEeecccceeeccCCceeeeeccccCCccC
Confidence 3467788889999999999999855443211111111110000 00111111111111 1222346788999965
Q ss_pred -CEEEEEeCCCeEEEEECCCCcEEEE
Q psy15549 205 -THLISGSVDNTAIMWDVHKGKNLGI 229 (621)
Q Consensus 205 -~~l~s~~~dg~i~vwd~~~~~~~~~ 229 (621)
.+|..-+.|..|++||+.....++.
T Consensus 180 D~hL~iL~sdnviRiy~lS~~telyl 205 (741)
T KOG4460|consen 180 DPHLVLLTSDNVIRIYSLSEPTELYL 205 (741)
T ss_pred CceEEEEecCcEEEEEecCCcchhhc
Confidence 6788888899999999987665543
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=83.82 E-value=74 Score=35.00 Aligned_cols=112 Identities=7% Similarity=-0.052 Sum_probs=58.0
Q ss_pred CeEEEeccccccCCcceEEEEecC-Cc----eEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGA-DS----HVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~-dg----~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
.+..+.+|||++ +|+.+.. +| .++ +-|+.++..... .+.+ .-..++|
T Consensus 128 ~l~~~~~Spdg~-----~la~~~d~~G~E~~~l~--------------v~d~~tg~~l~~------~i~~---~~~~~~w 179 (686)
T PRK10115 128 TLGGMAITPDNT-----IMALAEDFLSRRQYGIR--------------FRNLETGNWYPE------LLDN---VEPSFVW 179 (686)
T ss_pred EEeEEEECCCCC-----EEEEEecCCCcEEEEEE--------------EEECCCCCCCCc------cccC---cceEEEE
Confidence 367788999998 7776633 22 233 667765542111 1111 1156899
Q ss_pred ccCCCEEEEEc-C-C-----ceEEEEeccCccccccceecccccccCCCeE-EEEECCCCCEEEEEe---CCCcEEEEEc
Q psy15549 90 SPNGELLASGD-D-V-----GKEIWYLTERESGIANVEFASDLSRHQKAVN-VVRFSPNGELLASGD---DESTIIVWKQ 158 (621)
Q Consensus 90 spdg~~las~~-d-~-----~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~-~i~~sp~g~~l~s~s---~dg~i~vwd~ 158 (621)
++|++.|+... + + .|..+++.++.... ..+ +........ .+..+.++++++..+ .++.+.+++.
T Consensus 180 ~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d---~lv--~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 180 ANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQD---ELV--YEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred eeCCCEEEEEEecCCCCCCCEEEEEECCCChhHC---eEE--EeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 99998777654 2 2 23444444431110 111 222222232 333344788766543 3457888885
Q ss_pred c
Q psy15549 159 K 159 (621)
Q Consensus 159 ~ 159 (621)
.
T Consensus 255 ~ 255 (686)
T PRK10115 255 E 255 (686)
T ss_pred c
Confidence 3
|
|
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=83.79 E-value=9.5 Score=40.67 Aligned_cols=72 Identities=15% Similarity=0.246 Sum_probs=45.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCC----CcEEEEe--c--------------------cCCcceEEEEEcC----CCCEEEE
Q psy15549 202 PTSTHLISGSVDNTAIMWDVHK----GKNLGIL--T--------------------EHKKFVQGVAWDP----KNQYVAT 251 (621)
Q Consensus 202 pd~~~l~s~~~dg~i~vwd~~~----~~~~~~~--~--------------------~~~~~v~~l~~sp----~~~~l~s 251 (621)
++...|+.+..||.+....... +...... . .....+..++++. +..+|++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 4666888888899888887664 2221111 0 0123345566666 6789999
Q ss_pred EeCCCcEEEEEccCceeeeecc
Q psy15549 252 LSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 252 ~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
.+.|+.+|+||+.+++++....
T Consensus 236 l~~D~~LRiW~l~t~~~~~~~~ 257 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLATID 257 (547)
T ss_dssp EETTSEEEEEETTTTCEEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEec
Confidence 9999999999999999977654
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >KOG2063|consensus | Back alignment and domain information |
|---|
Probab=83.71 E-value=79 Score=35.26 Aligned_cols=72 Identities=19% Similarity=0.286 Sum_probs=46.1
Q ss_pred eccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccccc------ceeeccccccccCcEEEEEEccCC
Q psy15549 20 DIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIA------NVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 20 ~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~------~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
++...|. .|..|+.+|.+. +|.+........ ...+...+ +..+|..+...+.-
T Consensus 21 ~va~~~~-----~l~vGt~~G~L~--------------lY~i~~~~~~~~~~~~~~~~~~~~~~--~kk~i~~l~~~~~~ 79 (877)
T KOG2063|consen 21 CVAAYGN-----HLYVGTRDGDLY--------------LYSIYERGNPESVELVTETVKFEKEF--SKKPINKLLVCASL 79 (877)
T ss_pred HHHHhCC-----EEEEEcCCCcEE--------------EEeccccccccchhhhcchhHHhhhh--ccchhHHHhhcchh
Confidence 4444555 999999999999 555544321111 01111122 25677777777777
Q ss_pred CEEEEEcCCceEEEEeccC
Q psy15549 94 ELLASGDDVGKEIWYLTER 112 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~~ 112 (621)
.++.+-+|+.+.++++..-
T Consensus 80 ~~ll~l~dsqi~~~~l~~~ 98 (877)
T KOG2063|consen 80 ELLLILSDSQIAVHKLPEL 98 (877)
T ss_pred cchheecCCcceeeecCcc
Confidence 7888888999988888765
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=83.40 E-value=3.8 Score=25.05 Aligned_cols=29 Identities=14% Similarity=0.232 Sum_probs=19.5
Q ss_pred cccCcEEEEEEccCCCEEEEEc--C--CceEEE
Q psy15549 79 RHQKAVNVVRFSPNGELLASGD--D--VGKEIW 107 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~--d--~~v~iw 107 (621)
...+.-....|||||+.|+.++ + +...||
T Consensus 6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3445677889999999999877 3 444554
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=83.16 E-value=0.22 Score=49.15 Aligned_cols=142 Identities=13% Similarity=0.258 Sum_probs=92.3
Q ss_pred EEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEE-EEeCCCcEEEEEccCC
Q psy15549 84 VNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLA-SGDDESTIIVWKQKTD 161 (621)
Q Consensus 84 V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~-s~s~dg~i~vwd~~~~ 161 (621)
--...|-+.+.-++.++ +..+..||-... ....+ ..++....++|.-++..++ .+-..+.+.+||+.+.
T Consensus 37 pi~~~w~~e~~nlavaca~tiv~~YD~agq--------~~le~-n~tg~aldm~wDkegdvlavlAek~~piylwd~n~e 107 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANTIVIYYDKAGQ--------VILEL-NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSE 107 (615)
T ss_pred cceeeEecCCCceehhhhhhHHHhhhhhcc--------eeccc-CCchhHhhhhhccccchhhhhhhcCCCeeechhhhh
Confidence 33455777665566655 666777776542 11111 2344556788888777554 4556789999999876
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 241 (621)
..- ..-.+....-.-+.|++....++.+...|.+.|++..+.+.+-..-.|...+++++
T Consensus 108 ytq---------------------qLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~a 166 (615)
T KOG2247|consen 108 YTQ---------------------QLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIA 166 (615)
T ss_pred hHH---------------------HHhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEE
Confidence 421 00111111222278999888999999999999999888776666655888999999
Q ss_pred EcCCCCEEEEEeCCC
Q psy15549 242 WDPKNQYVATLSSDR 256 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg 256 (621)
+.+.+..+. ++.|.
T Consensus 167 v~lEd~vil-~dcd~ 180 (615)
T KOG2247|consen 167 VTLEDYVIL-CDCDN 180 (615)
T ss_pred ecccceeee-cCcHH
Confidence 998765443 44443
|
|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=82.26 E-value=26 Score=35.80 Aligned_cols=56 Identities=14% Similarity=0.131 Sum_probs=33.5
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCc--e---eEEEecccccceEEEEEcCCC-CeEEEEeCCCcE
Q psy15549 380 PYRIVIAVATENNILLYDTQHAS--P---FAFIANIHYTKLTDITWSSDG-KVLIASSTDGYC 436 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~--~---~~~~~~~h~~~v~~~~~spdg-~~l~s~s~dg~i 436 (621)
.+..|+++-..+.|+...+.... . ...+... ..+|.+|+.+||| .+.+..+..|.+
T Consensus 368 ~g~llv~~L~~~~l~r~~l~~~~~~v~~~~~~~~~~-~~RiRdv~~~pDg~~iy~~td~~g~~ 429 (454)
T TIGR03606 368 ENSLLIPSLKRGVIYRIKLDPDYSTVYGDAVPMFKT-NNRYRDVIASPDGNVLYVATDNFGNV 429 (454)
T ss_pred CCCEEEEEcCCCeEEEEEecCCcceecceeEEeecC-CCeeEEEEECCCCCEEEEEEcCCCcc
Confidence 34566666667778777775442 1 1223232 4689999999997 544444455543
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=82.00 E-value=6.6 Score=23.96 Aligned_cols=30 Identities=23% Similarity=0.411 Sum_probs=20.0
Q ss_pred cCCcceEEEEEcCCCCEEEEEeC-C--CcEEEE
Q psy15549 232 EHKKFVQGVAWDPKNQYVATLSS-D--RSLRTY 261 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~~l~s~~~-d--g~i~iw 261 (621)
.....-....|+|||++|+.++. + |...||
T Consensus 6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34556678899999999886654 4 555555
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=81.95 E-value=37 Score=30.19 Aligned_cols=181 Identities=14% Similarity=0.174 Sum_probs=94.9
Q ss_pred CCCEEEEEc---CCceEEEEeccCccccccceeccccc---ccCCCeEEEEECCCCCEE-EEEeCCCcEEEEEccCCCCC
Q psy15549 92 NGELLASGD---DVGKEIWYLTERESGIANVEFASDLS---RHQKAVNVVRFSPNGELL-ASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 92 dg~~las~~---d~~v~iw~~~~~~~~~~~~~~~~~~~---~h~~~V~~i~~sp~g~~l-~s~s~dg~i~vwd~~~~~~~ 164 (621)
+|.++.+.+ ...|++|++..+.. .....+. .....|+. -|+++ +-.-.+|.-..+|.++-+++
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~-----~~s~~l~~~~~FgEGit~-----~gd~~y~LTw~egvaf~~d~~t~~~l 124 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQE-----IFSEKLAPDTVFGEGITK-----LGDYFYQLTWKEGVAFKYDADTLEEL 124 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceE-----EEEeecCCccccccceee-----ccceEEEEEeccceeEEEChHHhhhh
Confidence 456666655 55689999987632 1111111 01112221 12222 23446788889999888876
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc--CCcc---eEE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE--HKKF---VQG 239 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~---v~~ 239 (621)
..+ .-.+.=+.++ .|++.|+.++....++.-|..+.....++.- ...+ +..
T Consensus 125 g~~----------------------~y~GeGWgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNE 180 (262)
T COG3823 125 GRF----------------------SYEGEGWGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNE 180 (262)
T ss_pred ccc----------------------ccCCcceeee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccc
Confidence 544 1222334444 3555577766666777777766544333321 1122 233
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 240 VAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 240 l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
+.|- +|...|-.=.+..|...+..+|+.+.-+.......... ....+....+.+++.|++..++..+
T Consensus 181 LE~V-dG~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~-----------~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 181 LEWV-DGELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELN-----------LDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred eeee-ccEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcC-----------ccccccccccceeecCcCCeEEEec
Confidence 4442 45555444445556666777777776665433222111 1112233457899999986665544
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.43 E-value=8 Score=38.27 Aligned_cols=172 Identities=12% Similarity=0.109 Sum_probs=90.7
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccc-ccCcEE-EEEE
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSR-HQKAVN-VVRF 89 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~-~l~~ 89 (621)
-..+|..+-..|||+ .|..-+. ..+. |+++........ ++...-.+ ....|+ .+..
T Consensus 219 ~~~~v~qllL~Pdg~-----~LYv~~g-~~~~--------------v~~L~~r~l~~r--kl~~dspg~~~~~Vte~l~l 276 (733)
T COG4590 219 PFSDVSQLLLTPDGK-----TLYVRTG-SELV--------------VALLDKRSLQIR--KLVDDSPGDSRHQVTEQLYL 276 (733)
T ss_pred CccchHhhEECCCCC-----EEEEecC-CeEE--------------EEeecccccchh--hhhhcCCCchHHHHHHHHHH
Confidence 345678888999998 6666555 5566 555554433221 00000011 001121 1112
Q ss_pred ccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 90 SPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 90 spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
-..|..|..++ |+.|.-|-....... ..+..++.++-....+..+.-..+.+-+++-+..|++.++.-...+.+
T Consensus 277 L~Gg~SLLv~~~dG~vsQWFdvr~~~~-p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~l---- 351 (733)
T COG4590 277 LSGGFSLLVVHEDGLVSQWFDVRRDGQ-PHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLL---- 351 (733)
T ss_pred HhCceeEEEEcCCCceeeeeeeecCCC-CcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcce----
Confidence 23455555555 777766654332221 223333333333333433332234456777788888888765444432
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI 229 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~ 229 (621)
.+..-...+..+++||.+.+|++-. .|.++++.+++..+-.+
T Consensus 352 ------------------L~~~~~~~~~~~~~Sp~~~~Ll~e~-~gki~~~~l~Nr~Peis 393 (733)
T COG4590 352 ------------------LFERAYQAPQLVAMSPNQAYLLSED-QGKIRLAQLENRNPEIS 393 (733)
T ss_pred ------------------ehhhhhcCcceeeeCcccchheeec-CCceEEEEecCCCCCcc
Confidence 1112223567789999999888754 57899998877654433
|
|
| >PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A | Back alignment and domain information |
|---|
Probab=80.08 E-value=84 Score=33.11 Aligned_cols=217 Identities=11% Similarity=0.070 Sum_probs=104.5
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCc---EEEEeccC-CcceEEEEEcCCC-CEEEEEeCCC--cEEEEEccCceeeeecc
Q psy15549 201 SPTSTHLISGSVDNTAIMWDVHKGK---NLGILTEH-KKFVQGVAWDPKN-QYVATLSSDR--SLRTYSIQSKKVISRAC 273 (621)
Q Consensus 201 spd~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~-~~~v~~l~~sp~~-~~l~s~~~dg--~i~iwd~~~~~~~~~~~ 273 (621)
..++..++.+..+|.+....+.... .+..+ +. .....++++..+| .+|+.|+.-| .+..|....-+.+..+.
T Consensus 219 ~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~-g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~ 297 (504)
T PF10433_consen 219 DKDGDRILLQDEDGDLYLLTLDNDGGSISITYL-GTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLP 297 (504)
T ss_dssp STTSSEEEEEETTSEEEEEEEEEEEEEEEEEEE-EE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE-
T ss_pred cCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEc-CCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEecc
Confidence 4567789999999999988776533 12222 22 3445677776655 4677777644 45555533333333331
Q ss_pred cCCCCCCCccccccccccccccCCcccceeeeeecCC----CC------eEEeccccccCCCCCCcceeeeeeee-----
Q psy15549 274 RSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD----GQ------LLIAPSGCLENSDSTRKPISVTHVFT----- 338 (621)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd----g~------~l~~~s~~~~~~d~~i~~~~~~~~~~----- 338 (621)
.-++|..+++... .. .|++++|.. .++.+++...--...
T Consensus 298 ------------------------N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g--~~gsL~~lr~Gi~~~~~~~~ 351 (504)
T PF10433_consen 298 ------------------------NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAG--KRGSLRILRNGIGIEGLELA 351 (504)
T ss_dssp ---------------------------SEEEEEEE-TSSSSS-------EEEEEESSG--GG-EEEEEEESBEEE--EEE
T ss_pred ------------------------CcCCccceEEeccccCCCCcccccceEEEEECcC--CCCcEEEEeccCCceeeeee
Confidence 1234455555321 11 455555432 455555543211111
Q ss_pred ecccCC--CceecCC----cccceeeeeccceeeecCC-CCCC-------CCccCCCcEEEEEEc-C--------CcEEE
Q psy15549 339 RACLNK--PAVCLPS----LQYYSVAVKCCPVLFELKP-SDDK-------PLFKLPYRIVIAVAT-E--------NNILL 395 (621)
Q Consensus 339 ~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~l~~~~~-d--------g~i~i 395 (621)
...... ....+.. +...+.+......++.... +... .-|..+...++++.- + ..|++
T Consensus 352 ~~~l~~v~~iW~l~~~~~~~~~lv~S~~~~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~~~~ivQVt~~~i~l 431 (504)
T PF10433_consen 352 SSELPGVTGIWTLKLSSSDHSYLVLSFPNETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVGDGRIVQVTPKGIRL 431 (504)
T ss_dssp EEEESTEEEEEEE-SSSSSBSEEEEEESSEEEEEEES----SSEEEEE---TS-SSS-EEEEEEETTTEEEEEESSEEEE
T ss_pred ccCCCCceEEEEeeecCCCceEEEEEcCCceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcCCCeEEEEecCeEEE
Confidence 000000 0001111 3334444444445555541 1111 145566677777765 3 25677
Q ss_pred EeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcC
Q psy15549 396 YDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~ 446 (621)
.+...++............|.+.+.. +.+++.+-.++.+.++.++....
T Consensus 432 ~~~~~~~~~~~w~~~~~~~I~~a~~~--~~~v~v~~~~~~~~~~~~~~~~~ 480 (504)
T PF10433_consen 432 IDLEDGKLTQEWKPPAGSIIVAASIN--DPQVLVALSGGELVYFELDDNKI 480 (504)
T ss_dssp EESSSTSEEEEEE-TTS---SEEEES--SSEEEEEE-TTEEEEEEEETTEE
T ss_pred EECCCCeEEEEEeCCCCCeEEEEEEC--CCEEEEEEeCCcEEEEEEECCce
Confidence 77777766655433344566666664 34677777788999999987655
|
... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 621 | ||||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 2e-15 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 8e-15 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 8e-15 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 2e-14 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 2e-14 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 2e-14 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 2e-14 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 2e-14 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 2e-14 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 2e-14 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 2e-14 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 2e-14 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 3e-14 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 3e-14 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 3e-14 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 5e-14 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 7e-14 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 8e-14 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 3e-12 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 2e-11 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 2e-11 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 4e-08 | ||
| 2bcj_B | 340 | Crystal Structure Of G Protein-coupled Receptor Kin | 8e-08 | ||
| 2bcj_B | 340 | Crystal Structure Of G Protein-coupled Receptor Kin | 2e-05 | ||
| 1a0r_B | 340 | Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA- | 8e-08 | ||
| 1a0r_B | 340 | Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA- | 2e-05 | ||
| 1got_B | 340 | Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer | 8e-08 | ||
| 1got_B | 340 | Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer | 2e-05 | ||
| 1gg2_B | 340 | G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet | 9e-08 | ||
| 1gg2_B | 340 | G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet | 2e-05 | ||
| 3sn6_B | 351 | Crystal Structure Of The Beta2 Adrenergic Receptor- | 9e-08 | ||
| 3sn6_B | 351 | Crystal Structure Of The Beta2 Adrenergic Receptor- | 2e-05 | ||
| 2xzm_R | 343 | Crystal Structure Of The Eukaryotic 40s Ribosomal S | 9e-08 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 1e-07 | ||
| 2hes_X | 330 | Cytosolic Iron-sulphur Assembly Protein- 1 Length = | 1e-07 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 8e-07 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 2e-04 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 1e-06 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 2e-06 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 7e-05 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 2e-06 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 7e-05 | ||
| 4ggd_A | 431 | Structural Analysis Of Human Cdc20 Supports Multisi | 3e-06 | ||
| 4gga_A | 420 | Structural Analysis Of Human Cdc20 Supports Multi-S | 4e-06 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 6e-06 | ||
| 2pbi_B | 354 | The Multifunctional Nature Of Gbeta5RGS9 REVEALED F | 9e-06 | ||
| 4ggc_A | 318 | Structural Analysis Of Human Cdc20 Supports Multi-S | 1e-05 | ||
| 1nr0_A | 611 | Two Seven-Bladed Beta-Propeller Domains Revealed By | 1e-05 | ||
| 1nr0_A | 611 | Two Seven-Bladed Beta-Propeller Domains Revealed By | 5e-04 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 1e-05 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 1e-05 | ||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 1e-05 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 2e-05 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 3e-05 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 4e-05 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 5e-05 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 1e-04 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 2e-04 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 4e-04 | ||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 4e-04 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 4e-04 | ||
| 3iz6_a | 380 | Localization Of The Small Subunit Ribosomal Protein | 4e-04 | ||
| 2yba_A | 422 | Crystal Structure Of Nurf55 In Complex With Histone | 5e-04 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 6e-04 |
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340 | Back alignment and structure |
|
| >pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340 | Back alignment and structure |
|
| >pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340 | Back alignment and structure |
|
| >pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340 | Back alignment and structure |
|
| >pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351 | Back alignment and structure |
|
| >pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351 | Back alignment and structure |
|
| >pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431 | Back alignment and structure |
|
| >pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354 | Back alignment and structure |
|
| >pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318 | Back alignment and structure |
|
| >pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611 | Back alignment and structure |
|
| >pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380 | Back alignment and structure |
|
| >pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 621 | |||
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 100.0 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 100.0 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.98 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.98 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.98 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.98 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.98 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.98 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.97 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.97 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.97 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.97 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.96 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.96 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.96 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.96 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.96 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.96 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.95 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.95 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.94 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.94 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.93 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.93 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.93 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.93 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.92 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.92 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.92 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.91 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.91 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.9 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.9 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.9 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.9 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.9 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.89 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.89 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.89 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.89 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.88 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.88 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.87 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.87 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.86 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.86 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.86 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.85 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.85 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.85 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.84 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.83 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.82 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.8 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.8 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.79 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.79 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.79 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.77 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.75 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.75 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.73 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.73 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.73 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.7 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.69 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.69 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.69 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.69 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.67 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.67 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.66 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.66 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.65 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.64 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.63 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.63 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.61 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.6 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.6 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.59 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.59 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.59 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.58 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.58 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.57 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.56 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.54 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.53 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.52 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.5 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.49 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.48 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.48 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.47 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.45 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.43 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.37 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.36 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.35 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.34 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.34 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.34 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.34 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.33 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.31 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.3 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 99.29 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.28 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.26 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.26 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.19 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.18 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.15 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.15 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 99.1 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 99.08 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 99.07 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.03 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.03 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.02 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.99 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.97 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.95 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.92 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.89 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.89 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.87 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.87 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.83 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.81 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.78 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.67 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.65 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.64 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.63 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.6 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.57 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.55 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.54 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.51 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.49 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.48 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.48 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.47 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.45 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.45 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.43 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.41 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.4 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.4 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.39 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.36 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.36 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.34 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.33 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.31 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.3 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.29 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.26 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.26 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.21 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 98.21 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.2 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.19 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 98.16 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.16 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.14 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.08 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.07 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.01 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.0 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.92 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.91 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.86 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.86 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.84 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.83 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.81 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.79 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.68 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.68 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.59 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 97.58 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.53 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.52 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.52 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.51 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.49 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.45 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.42 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.4 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.4 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 97.4 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.4 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.37 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.35 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 97.33 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 97.32 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.28 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.23 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.2 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 97.11 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.1 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 96.89 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 96.88 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 96.68 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 96.64 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 96.61 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 96.43 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 96.3 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 96.29 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 96.25 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 96.24 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 96.23 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 96.2 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 96.18 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 96.06 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 96.04 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 95.99 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 95.8 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 95.7 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 95.48 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 95.46 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 95.29 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 95.14 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 95.04 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 94.4 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 94.35 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 94.04 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 93.7 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 92.61 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 92.09 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 91.53 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 91.5 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 91.42 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 88.36 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 87.94 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 87.53 | |
| 3q6k_A | 381 | 43.2 kDa salivary protein; beta propeller, binding | 81.21 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 81.2 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 80.01 |
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-50 Score=432.72 Aligned_cols=417 Identities=16% Similarity=0.194 Sum_probs=320.0
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCcccc-------cc-----------------------
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRL-------KT----------------------- 55 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~-------~~----------------------- 55 (621)
...+.+|.+.|++++|+|||+ +||+|+.||.|++||+...... +.
T Consensus 52 ~~~~~~h~~~v~~~~~spdg~-----~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~ 126 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSPSGY-----YCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE 126 (611)
T ss_dssp CEEECCCSSCEEEEEECTTSS-----EEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS
T ss_pred CeEecCCCCceEEEEECCCCc-----EEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC
Confidence 345667999999999999999 9999999999999998532211 01
Q ss_pred --ceeEEeccccccccceeeccccccccCcEEEEEEccCCC-EEEEEc-CCceEEEEeccCccccccceecccccccCCC
Q psy15549 56 --GKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE-LLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKA 131 (621)
Q Consensus 56 --~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~-~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~ 131 (621)
+.||.+..+.. ...+.+|...|++++|+|++. .|++|+ |+.|++|+.... .....+.+|...
T Consensus 127 ~~~~v~~wd~~~~-------~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~-------~~~~~l~~H~~~ 192 (611)
T 1nr0_A 127 RFGHVFLFDTGTS-------NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-------KFKSTFGEHTKF 192 (611)
T ss_dssp CSEEEEETTTCCB-------CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-------EEEEEECCCSSC
T ss_pred ceeEEEEeeCCCC-------cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC-------eEeeeeccccCc
Confidence 12222222222 235789999999999999987 588887 889999997654 566778999999
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe
Q psy15549 132 VNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS 211 (621)
Q Consensus 132 V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~ 211 (621)
|.+++|+|+|++|++|+.|++|++||+.+++....+... .....+|...|.+++|+|++++|++++
T Consensus 193 V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~--------------~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDD--------------SLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCT--------------TSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccc--------------cccccccCCCEEEEEECCCCCEEEEEe
Confidence 999999999999999999999999999887654221000 001127999999999999999999999
Q ss_pred CCCeEEEEECCCCcEEE-------------------------------------------EeccCCcceEEEEEcCCCCE
Q psy15549 212 VDNTAIMWDVHKGKNLG-------------------------------------------ILTEHKKFVQGVAWDPKNQY 248 (621)
Q Consensus 212 ~dg~i~vwd~~~~~~~~-------------------------------------------~~~~~~~~v~~l~~sp~~~~ 248 (621)
.|++|++||+.+++++. .+.+|...|.+++|+|+|++
T Consensus 259 ~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~ 338 (611)
T 1nr0_A 259 ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKT 338 (611)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred CCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCE
Confidence 99999999998876543 33478889999999999999
Q ss_pred EEEEeCCCcEEEEEccCceeeeecc-cCCCCCCC-----ccc----cccccc----------------------------
Q psy15549 249 VATLSSDRSLRTYSIQSKKVISRAC-RSKLPVDS-----SHE----LFDKVV---------------------------- 290 (621)
Q Consensus 249 l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~-----~~~----~~~~~~---------------------------- 290 (621)
|++++.|+.|++||+.++.....+. .+...+.. ... ..+...
T Consensus 339 l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (611)
T 1nr0_A 339 LFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA 418 (611)
T ss_dssp EEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEE
T ss_pred EEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEE
Confidence 9999999999999999887655431 11111000 000 000000
Q ss_pred ----------------ccccc-----CCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceec
Q psy15549 291 ----------------PLFHD-----DTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCL 349 (621)
Q Consensus 291 ----------------~~~~~-----~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~ 349 (621)
.++.. ..+...+.+++|+|||++|++++ .|+.+++|++...... ....
T Consensus 419 ~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs-----~D~~v~lwd~~~~~~~-----~~~~- 487 (611)
T 1nr0_A 419 VSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGG-----QDSKVHVYKLSGASVS-----EVKT- 487 (611)
T ss_dssp ECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEE-----TTSEEEEEEEETTEEE-----EEEE-
T ss_pred EeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeC-----CCCeEEEEEccCCcee-----eeec-
Confidence 00000 01234578999999999999999 8999999998632110 0111
Q ss_pred CCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC-CceeEE-EecccccceEEEEEcCCCCeE
Q psy15549 350 PSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH-ASPFAF-IANIHYTKLTDITWSSDGKVL 427 (621)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~-~~~~h~~~v~~~~~spdg~~l 427 (621)
..|...+.++.|+| ++++|++++.|+.|++||+.+ ++.+.. ...+|...|++++|+|||++|
T Consensus 488 ~~h~~~v~~v~fsp----------------dg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~l 551 (611)
T 1nr0_A 488 IVHPAEITSVAFSN----------------NGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL 551 (611)
T ss_dssp EECSSCEEEEEECT----------------TSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEE
T ss_pred cCCCCceEEEEECC----------------CCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEE
Confidence 45777888899888 789999999999999999988 555443 233599999999999999999
Q ss_pred EEEeCCCcEEEEEecCCc-CC-cccCCC-CCcccccCCCCCCCCcccCCCcccHHHhcc
Q psy15549 428 IASSTDGYCSIISFGDNE-IG-IPYVPP-SGEESKENDPTKGEPVRSEDKPRSAEQAKG 483 (621)
Q Consensus 428 ~s~s~dg~i~iw~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~ 483 (621)
|+|+.|++|++|++.++. .. ..+.+| ...+..+.|++++. +++++.|+.|++|++
T Consensus 552 asgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 552 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp EEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred EEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 999999999999999865 33 456677 78899999999998 999999999999986
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-48 Score=414.71 Aligned_cols=412 Identities=15% Similarity=0.214 Sum_probs=300.8
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
..+++.+.+++|+|||+ +||+++ ++.|+ ||++.++.... .+.+|...|++++|
T Consensus 15 ~~~~g~~~~~~~spdg~-----~l~~~~-~~~v~--------------l~~~~~~~~~~-------~~~~h~~~v~~~~~ 67 (611)
T 1nr0_A 15 RTARGTAVVLGNTPAGD-----KIQYCN-GTSVY--------------TVPVGSLTDTE-------IYTEHSHQTTVAKT 67 (611)
T ss_dssp CCCTTCCCCCEECTTSS-----EEEEEE-TTEEE--------------EEETTCSSCCE-------EECCCSSCEEEEEE
T ss_pred CcccCceeEEeeCCCCC-----EEEeCC-CCEEE--------------EecCCCcccCe-------EecCCCCceEEEEE
Confidence 34678899999999998 999988 46888 99987655433 48899999999999
Q ss_pred ccCCCEEEEEc-CCceEEEEeccCccccccceecccc-------------------------------------------
Q psy15549 90 SPNGELLASGD-DVGKEIWYLTERESGIANVEFASDL------------------------------------------- 125 (621)
Q Consensus 90 spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~------------------------------------------- 125 (621)
+|+|++||+|+ |+.|+|||+..+.. .....+
T Consensus 68 spdg~~lasg~~d~~v~lWd~~~~~~-----~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~ 142 (611)
T 1nr0_A 68 SPSGYYCASGDVHGNVRIWDTTQTTH-----ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGN 142 (611)
T ss_dssp CTTSSEEEEEETTSEEEEEESSSTTC-----CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBC
T ss_pred CCCCcEEEEEeCCCCEEEeECCCCcc-----eeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcce
Confidence 99999999998 88899999864321 112233
Q ss_pred -cccCCCeEEEEECCCCC-EEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC
Q psy15549 126 -SRHQKAVNVVRFSPNGE-LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT 203 (621)
Q Consensus 126 -~~h~~~V~~i~~sp~g~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd 203 (621)
.+|...|++++|+|++. .|++|+.|++|++||..+.+ ....+.+|...|++++|+|+
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~---------------------~~~~l~~H~~~V~~v~fspd 201 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK---------------------FKSTFGEHTKFVHSVRYNPD 201 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE---------------------EEEEECCCSSCEEEEEECTT
T ss_pred ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe---------------------EeeeeccccCceEEEEECCC
Confidence 34444555555555443 35555555555555543332 34667899999999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEec-------cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCC
Q psy15549 204 STHLISGSVDNTAIMWDVHKGKNLGILT-------EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSK 276 (621)
Q Consensus 204 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~-------~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 276 (621)
+++|++++.|+.|++||+.+++.+..+. +|.+.|.+++|+|++++|++++.|++|++||+.+++.+..+....
T Consensus 202 g~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~ 281 (611)
T 1nr0_A 202 GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGT 281 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCC
Confidence 9999999999999999999999988884 799999999999999999999999999999999998877664321
Q ss_pred CCCCC-------cc----cccccccc---------ccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeee
Q psy15549 277 LPVDS-------SH----ELFDKVVP---------LFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHV 336 (621)
Q Consensus 277 ~~~~~-------~~----~~~~~~~~---------~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~ 336 (621)
..... .. ...+.... ......|...|.+++|+|||++|++++ .|+.+++|++...
T Consensus 282 ~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s-----~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 282 RIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSAD-----AEGHINSWDISTG 356 (611)
T ss_dssp SGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-----TTSCEEEEETTTC
T ss_pred CccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEe-----CCCcEEEEECCCC
Confidence 10000 00 00011111 112345778899999999999999999 8999999997532
Q ss_pred eeecccCCCceecCCcccceeeeeccc-------------------------------------eeeecCCCC-------
Q psy15549 337 FTRACLNKPAVCLPSLQYYSVAVKCCP-------------------------------------VLFELKPSD------- 372 (621)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~------- 372 (621)
....... ..|...+.++.+++ ....+.+++
T Consensus 357 ~~~~~~~------~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 430 (611)
T 1nr0_A 357 ISNRVFP------DVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC 430 (611)
T ss_dssp CEEECSS------CSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE
T ss_pred ceeeecc------cCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEe
Confidence 2111100 01111111111110 000000110
Q ss_pred ---------------------CCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEe
Q psy15549 373 ---------------------DKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASS 431 (621)
Q Consensus 373 ---------------------~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s 431 (621)
....++++++++++++.|+.|++||+.++........+|...|++++|+|||++|++++
T Consensus 431 ~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s 510 (611)
T 1nr0_A 431 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATD 510 (611)
T ss_dssp SSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEc
Confidence 12346778899999999999999999887542222246999999999999999999999
Q ss_pred CCCcEEEEEecC-CcCCcc--cCCCCCcccccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 432 TDGYCSIISFGD-NEIGIP--YVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 432 ~dg~i~iw~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
.|++|++|++.+ +++... +..|...+..+.|+|+|+.+++++.|+.+++|++..
T Consensus 511 ~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 511 QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp TTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred CCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 999999999997 666554 344888999999999999999999999999999764
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=400.59 Aligned_cols=362 Identities=22% Similarity=0.370 Sum_probs=315.2
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
.....|...|.+++|+|+++ +|++++.|+.|+ +|+.... ....+.+|...|.+
T Consensus 215 ~~~~~~~~~v~~~~~s~dg~-----~l~~~~~d~~i~--------------~w~~~~~--------~~~~~~~~~~~v~~ 267 (577)
T 2ymu_A 215 QTLTGHSSSVRGVAFSPDGQ-----TIASASDDKTVK--------------LWNRNGQ--------LLQTLTGHSSSVNG 267 (577)
T ss_dssp EEEECCSSCEEEEEECTTSS-----CEEEEETTSCEE--------------EECTTSC--------EEEEECCCSSCEEE
T ss_pred EEEecCCCCEEEEEECCCCC-----EEEEEeCCCEEE--------------EEeCCCC--------EEEEEecCCCCEEE
Confidence 34566888999999999998 999999999999 8885422 23357889999999
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
++|+|++++|++++ ++.+++|+... .....+.+|...|.+++|+|++++|++++.|+.|++||+....
T Consensus 268 v~~~~d~~~l~~~~~d~~i~~w~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~--- 336 (577)
T 2ymu_A 268 VAFRPDGQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH--- 336 (577)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTS--------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE---
T ss_pred EEEcCCCCEEEEEeCCCEEEEEeCCC--------cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe---
Confidence 99999999999988 88899999653 4456678999999999999999999999999999999976543
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~ 245 (621)
...+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+..|...|.+++|+|+
T Consensus 337 -------------------~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d 396 (577)
T 2ymu_A 337 -------------------LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPD 396 (577)
T ss_dssp -------------------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTT
T ss_pred -------------------eEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCC
Confidence 2556789999999999999999999999999999995 67888899999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCC
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSD 325 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d 325 (621)
+++|++++.|+.|++||. +++.+..+. .+...|.+++|+||+++|++++ .|
T Consensus 397 g~~l~~~~~d~~v~~~~~-~~~~~~~~~-----------------------~~~~~v~~~~~s~d~~~l~~~~-----~d 447 (577)
T 2ymu_A 397 GQTIASASDDKTVKLWNR-NGQLLQTLT-----------------------GHSSSVWGVAFSPDDQTIASAS-----DD 447 (577)
T ss_dssp SSCEEEEETTSEEEEECT-TCCEEEEEE-----------------------CCSSCEEEEEECTTSSEEEEEE-----TT
T ss_pred CCEEEEEeCCCEEEEEeC-CCCEEEEec-----------------------CCCCCeEEEEECCCCCEEEEEc-----CC
Confidence 999999999999999996 455555443 3345679999999999999998 89
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA 405 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 405 (621)
+.+++|+.. ......+.+|...+.++.|+| ++.+|++++.|+.|++||. +++.+.
T Consensus 448 ~~v~~w~~~--------~~~~~~~~~~~~~v~~~~~sp----------------d~~~las~~~d~~i~iw~~-~~~~~~ 502 (577)
T 2ymu_A 448 KTVKLWNRN--------GQLLQTLTGHSSSVRGVAFSP----------------DGQTIASASDDKTVKLWNR-NGQLLQ 502 (577)
T ss_dssp SEEEEEETT--------SCEEEEEECCSSCEEEEEECT----------------TSCEEEEEETTSEEEEEET-TSCEEE
T ss_pred CEEEEEECC--------CCEEEEEcCCCCCEEEEEEcC----------------CCCEEEEEeCCCEEEEEcC-CCCEEE
Confidence 999999853 233445667888888888887 7789999999999999995 677777
Q ss_pred EEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhc
Q psy15549 406 FIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 406 ~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~ 482 (621)
.+ .+|...|++++|+|||++||+++.||.|++||. ++++...+.+|...+..+.|+|+++.+++++.|+.|++|+
T Consensus 503 ~~-~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 503 TL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EE-ECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EE-eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 77 469999999999999999999999999999995 6788888999999999999999999999999999999995
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-45 Score=371.33 Aligned_cols=286 Identities=21% Similarity=0.369 Sum_probs=257.8
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
.+.+|.++|++++|+|++. +|++|+.||.|+ |||+.++.... .+.+|.+.|.++
T Consensus 103 ~l~gh~~~V~~~~~~p~~~-----~l~s~s~Dg~i~--------------vwd~~~~~~~~-------~l~~h~~~V~~v 156 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFS-----VMVSASEDATIK--------------VWDYETGDFER-------TLKGHTDSVQDI 156 (410)
T ss_dssp EEECCSSCEEEEEECSSSS-----EEEEEESSSCEE--------------EEETTTCCCCE-------EECCCSSCEEEE
T ss_pred eecccCCcEEEEEEcCCCC-----EEEEEeCCCeEE--------------EEECCCCcEEE-------EEeccCCcEEEE
Confidence 4567999999999999998 999999999999 99988776543 488999999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
+|+|++++|++|+ |+.|++|++... ..+..+.+|...|.+++|+|++++|++|+.|++|++||+.++..+
T Consensus 157 ~~~~~~~~l~sgs~D~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~-- 227 (410)
T 1vyh_C 157 SFDHSGKLLASCSADMTIKLWDFQGF-------ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV-- 227 (410)
T ss_dssp EECTTSSEEEEEETTSCCCEEETTSS-------CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE--
T ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCC-------ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE--
Confidence 9999999999998 889999999876 667788999999999999999999999999999999999988753
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC-
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK- 245 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~- 245 (621)
..+.+|...|.++.|+|++.+|++|+.|+.|++||+.++++...+..|...|.+++|+|+
T Consensus 228 -------------------~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 288 (410)
T 1vyh_C 228 -------------------KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPES 288 (410)
T ss_dssp -------------------EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSC
T ss_pred -------------------EEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcc
Confidence 667899999999999999999999999999999999999999999999999999999996
Q ss_pred -------------------CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeee
Q psy15549 246 -------------------NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLT 306 (621)
Q Consensus 246 -------------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 306 (621)
+.+|++|+.|+.|++||++++..+..+.. +...|.+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~-----------------------h~~~v~~v~ 345 (410)
T 1vyh_C 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-----------------------HDNWVRGVL 345 (410)
T ss_dssp GGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC-----------------------CSSCEEEEE
T ss_pred cccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC-----------------------CCCcEEEEE
Confidence 67899999999999999999988776643 344578899
Q ss_pred ecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEE
Q psy15549 307 FSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIA 386 (621)
Q Consensus 307 ~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (621)
|+|+|++|++++
T Consensus 346 ~~~~g~~l~s~s-------------------------------------------------------------------- 357 (410)
T 1vyh_C 346 FHSGGKFILSCA-------------------------------------------------------------------- 357 (410)
T ss_dssp ECSSSSCEEEEE--------------------------------------------------------------------
T ss_pred EcCCCCEEEEEe--------------------------------------------------------------------
Confidence 999887776654
Q ss_pred EEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 387 VATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 387 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
.|+.|++||+.+++.+..+ .+|...|++++|+|++.+|++|+.||+|++|++
T Consensus 358 --~D~~i~vwd~~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 358 --DDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp --TTTEEEEECCTTSCCCEEE-ECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred --CCCeEEEEECCCCceEEEE-cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 7899999999999888888 469999999999999999999999999999986
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=391.42 Aligned_cols=381 Identities=23% Similarity=0.393 Sum_probs=324.1
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
.....|...|.+++|+|+++ +|++|+.|+.|+ +|+... + ....+.+|...|.+
T Consensus 174 ~~~~~~~~~v~~~~~~~~~~-----~l~~~~~d~~v~--------------~w~~~~-~-------~~~~~~~~~~~v~~ 226 (577)
T 2ymu_A 174 QTLTGHSSSVWGVAFSPDGQ-----TIASASDDKTVK--------------LWNRNG-Q-------LLQTLTGHSSSVRG 226 (577)
T ss_dssp EEEECCSSCEEEEEECTTSS-----CEEEEETTSEEE--------------EECTTS-C-------EEEEEECCSSCEEE
T ss_pred eeccCCCcceeeeeecCCCC-----EEEEEcCCCEEE--------------EEeCCC-c-------EEEEEecCCCCEEE
Confidence 34556888999999999998 999999999999 888532 1 23357889999999
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
++|+|++++|++++ ++.+++|+... ..+..+.+|...|.+++|+|++++|++++.|+.|++|+....
T Consensus 227 ~~~s~dg~~l~~~~~d~~i~~w~~~~--------~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~---- 294 (577)
T 2ymu_A 227 VAFSPDGQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQ---- 294 (577)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTTS--------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC----
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCC--------CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc----
Confidence 99999999999988 88899998643 456678899999999999999999999999999999996432
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~ 245 (621)
....+.+|...|.+++|+|++++|++++.|+.|++||+. +..+..+..|...|.+++|+|+
T Consensus 295 ------------------~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~ 355 (577)
T 2ymu_A 295 ------------------LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPD 355 (577)
T ss_dssp ------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTT
T ss_pred ------------------EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCC
Confidence 136678999999999999999999999999999999975 5566778899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCC
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSD 325 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d 325 (621)
+++|++++.|+.|++||. +++.+..+. .+...|.+++|+|+|++|++++ .|
T Consensus 356 g~~l~~~~~dg~v~~~~~-~~~~~~~~~-----------------------~~~~~v~~~~~s~dg~~l~~~~-----~d 406 (577)
T 2ymu_A 356 GQTIASASDDKTVKLWNR-NGQLLQTLT-----------------------GHSSSVRGVAFSPDGQTIASAS-----DD 406 (577)
T ss_dssp SSEEEEEETTSEEEEEET-TCCEEEEEE-----------------------CCSSCEEEEEECTTSSCEEEEE-----TT
T ss_pred CCEEEEEeCCCEEEEEcC-CCCEEEEec-----------------------CCCCCeEEEEECCCCCEEEEEe-----CC
Confidence 999999999999999996 455555543 2345679999999999999998 89
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA 405 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 405 (621)
+.+++|+.. ......+.+|...+.++.|+| ++.++++++.|+.|++||. +++.+.
T Consensus 407 ~~v~~~~~~--------~~~~~~~~~~~~~v~~~~~s~----------------d~~~l~~~~~d~~v~~w~~-~~~~~~ 461 (577)
T 2ymu_A 407 KTVKLWNRN--------GQLLQTLTGHSSSVWGVAFSP----------------DDQTIASASDDKTVKLWNR-NGQLLQ 461 (577)
T ss_dssp SEEEEECTT--------CCEEEEEECCSSCEEEEEECT----------------TSSEEEEEETTSEEEEEET-TSCEEE
T ss_pred CEEEEEeCC--------CCEEEEecCCCCCeEEEEECC----------------CCCEEEEEcCCCEEEEEEC-CCCEEE
Confidence 999999853 233445667788888888887 7789999999999999996 456666
Q ss_pred EEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 406 FIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 406 ~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
.+ .+|...|++++|+|||++|++++.|+.|++|+. ++++...+..|...+..+.|+|+++.+++++.|+.|++|+..+
T Consensus 462 ~~-~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 462 TL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp EE-ECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred EE-cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 66 469999999999999999999999999999995 6788889999999999999999999999999999999999888
Q ss_pred cccccccc------CCCCCCCc
Q psy15549 486 KVLGEKQT------GNKVSPTD 501 (621)
Q Consensus 486 ~~~~~~~~------~~~~s~~~ 501 (621)
+.+..+.+ ...|+|++
T Consensus 540 ~~~~~~~~h~~~v~~~~fs~dg 561 (577)
T 2ymu_A 540 QLLQTLTGHSSSVWGVAFSPDG 561 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTS
T ss_pred CEEEEEcCCCCCEEEEEEcCCC
Confidence 77766654 34456655
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=353.90 Aligned_cols=292 Identities=20% Similarity=0.335 Sum_probs=253.0
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
...|.++|++|+|+|+++ .+..+|++|+.|+.|+ ||++..... .....+.+|...|.+++
T Consensus 28 ~~~H~~~V~~v~~~~~~~-~~~~~l~tgs~D~~v~--------------vW~~~~~~~-----~~~~~l~gh~~~v~~~~ 87 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKK-ENSETVVTGSLDDLVK--------------VWKWRDERL-----DLQWSLEGHQLGVVSVD 87 (321)
T ss_dssp TTSSSSCEEEEEEC--------CEEEEEETTSCEE--------------EEEEETTEE-----EEEEEECCCSSCEEEEE
T ss_pred cccCCCcEEEEEEecCCC-CCCCEEEEEcCCCCEE--------------EEECCCCCe-----eeeeeeccCCCCEEEEE
Confidence 347999999999998642 1223899999999999 888875432 23345789999999999
Q ss_pred EccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 89 FSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 89 ~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
|++++.++++++ |+.|++|++..+ ..+..+..|...+.+++|+|++++|++++.||.|++|++.+++..
T Consensus 88 ~~~~~~~l~s~s~D~~i~lWd~~~~-------~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~--- 157 (321)
T 3ow8_A 88 ISHTLPIAASSSLDAHIRLWDLENG-------KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE--- 157 (321)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTT-------EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE---
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCC-------CEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee---
Confidence 999999999998 899999999877 566777888899999999999999999999999999999887643
Q ss_pred CCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC
Q psy15549 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247 (621)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~ 247 (621)
..+..|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|+++
T Consensus 158 ------------------~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~ 219 (321)
T 3ow8_A 158 ------------------YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 219 (321)
T ss_dssp ------------------EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSC
T ss_pred ------------------EEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCC
Confidence 55677888999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCC
Q psy15549 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDST 327 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~ 327 (621)
+|++++.|+.|++||+++++....+. .+...|.+++|+|++++|++++
T Consensus 220 ~l~s~s~dg~i~iwd~~~~~~~~~~~-----------------------~h~~~v~~~~~sp~~~~l~s~s--------- 267 (321)
T 3ow8_A 220 LLVTASDDGYIKIYDVQHANLAGTLS-----------------------GHASWVLNVAFCPDDTHFVSSS--------- 267 (321)
T ss_dssp EEEEECTTSCEEEEETTTCCEEEEEC-----------------------CCSSCEEEEEECTTSSEEEEEE---------
T ss_pred EEEEEcCCCeEEEEECCCcceeEEEc-----------------------CCCCceEEEEECCCCCEEEEEe---------
Confidence 99999999999999999887766654 3345578899999887776654
Q ss_pred CcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEE
Q psy15549 328 RKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFI 407 (621)
Q Consensus 328 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 407 (621)
.|+.|++||+.+++++..+
T Consensus 268 -------------------------------------------------------------~D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 268 -------------------------------------------------------------SDKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp -------------------------------------------------------------TTSCEEEEETTTTEEEEEE
T ss_pred -------------------------------------------------------------CCCcEEEEeCCCCEEEEEE
Confidence 7899999999999998888
Q ss_pred ecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 408 ANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 408 ~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
. +|...|.+++|+|+|++|++++.||.|++||+.
T Consensus 287 ~-~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 287 F-DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp C-CCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred c-CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 4 699999999999999999999999999999963
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=357.05 Aligned_cols=291 Identities=21% Similarity=0.367 Sum_probs=253.2
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
..+.+|.++|++++|+|+++ +|++|+.||.|+ |||+.++.... .+..|...|.+
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~-----~l~s~s~Dg~v~--------------iWd~~~~~~~~-------~~~~~~~~v~~ 102 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSR-----LLLSASQDGKLI--------------IWDSYTTNKVH-------AIPLRSSWVMT 102 (340)
T ss_dssp EEECCCSSCEEEEEECTTSS-----EEEEEETTTEEE--------------EEETTTCCEEE-------EEECSSSCEEE
T ss_pred eeecCCCCceEEEEECCCCC-----EEEEEeCCCcEE--------------EEECCCCCcce-------EeecCCccEEE
Confidence 45667999999999999998 999999999999 99887665433 37789999999
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
++|+|+|++|++|+ |+.+++|++..... .......+.+|...|.++.|++++. |++++.|++|++||+.++..+
T Consensus 103 ~~~s~~~~~l~s~~~d~~v~iw~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~- 177 (340)
T 1got_B 103 CAYAPSGNYVACGGLDNICSIYNLKTREG---NVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQT- 177 (340)
T ss_dssp EEECTTSSEEEEEETTCEEEEEETTTCSB---SCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEE-
T ss_pred EEECCCCCEEEEEeCCCeEEEEECccCCC---cceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEE-
Confidence 99999999999988 88899999876532 1244556789999999999998774 889999999999999887643
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~ 245 (621)
..+.+|...|.+++|+|++++|++|+.|+.|++||++++.++..+.+|...|.+++|+|+
T Consensus 178 --------------------~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~ 237 (340)
T 1got_B 178 --------------------TTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN 237 (340)
T ss_dssp --------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred --------------------EEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCC
Confidence 667899999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCC
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSD 325 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d 325 (621)
+++|++++.||.|++||+++++.+..+.. ......|.+++|+|+|++|++++
T Consensus 238 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~---------------------~~~~~~v~~~~~s~~g~~l~~g~------- 289 (340)
T 1got_B 238 GNAFATGSDDATCRLFDLRADQELMTYSH---------------------DNIICGITSVSFSKSGRLLLAGY------- 289 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECC---------------------TTCCSCEEEEEECTTSSEEEEEE-------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEcc---------------------CCcccceEEEEECCCCCEEEEEC-------
Confidence 99999999999999999998876655421 11223578888888887776654
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA 405 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 405 (621)
.|+.|++||+.+++.+.
T Consensus 290 ---------------------------------------------------------------~d~~i~vwd~~~~~~~~ 306 (340)
T 1got_B 290 ---------------------------------------------------------------DDFNCNVWDALKADRAG 306 (340)
T ss_dssp ---------------------------------------------------------------TTSEEEEEETTTCCEEE
T ss_pred ---------------------------------------------------------------CCCeEEEEEcccCcEee
Confidence 78999999999998888
Q ss_pred EEecccccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 406 FIANIHYTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 406 ~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
.+ .+|...|++++|+|+|++|++|+.||+|+|||
T Consensus 307 ~~-~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 307 VL-AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred Ee-ecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 77 46999999999999999999999999999996
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=352.30 Aligned_cols=295 Identities=20% Similarity=0.325 Sum_probs=251.6
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
...+.+|.++|+|++|+|+++ +||+|+.||.|+ |||..++.... .+..|...|.
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~-----~l~s~s~Dg~v~--------------vWd~~~~~~~~-------~~~~~~~~v~ 110 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKR-----RIVSSSQDGKVI--------------VWDSFTTNKEH-------AVTMPCTWVM 110 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSS-----EEEEEETTSEEE--------------EEETTTCCEEE-------EEECSSSCCC
T ss_pred EEEecCCCCeEEEEEECCCCC-----EEEEEeCCCeEE--------------EEECCCCCcce-------EEecCCCCEE
Confidence 455678999999999999998 999999999999 88877665433 3667889999
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
+++|+|+|.+|++|+ |+.+++|++....... .......+.+|...|.+++|+|++..|++++.|++|++||+.+++.+
T Consensus 111 ~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~ 189 (354)
T 2pbi_B 111 ACAYAPSGCAIACGGLDNKCSVYPLTFDKNEN-MAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL 189 (354)
T ss_dssp EEEECTTSSEEEEESTTSEEEEEECCCCTTCC-SGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEECCCCCEEEEeeCCCCEEEEEEecccccc-ccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE
Confidence 999999999999998 8899999987542211 11334556789999999999999999999999999999999988753
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP--TSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp--d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~ 242 (621)
..+.+|...|.+++|+| ++++|++|+.||.|++||+++++++..+..|...|.+++|
T Consensus 190 ---------------------~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~ 248 (354)
T 2pbi_B 190 ---------------------QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRY 248 (354)
T ss_dssp ---------------------EEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred ---------------------EEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence 66789999999999988 5789999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
+|++.+|++++.|++|++||++.++.+..+... .....+.+++|+|+|.+|+++
T Consensus 249 ~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~---------------------~~~~~~~~~~~s~~g~~l~~g----- 302 (354)
T 2pbi_B 249 YPSGDAFASGSDDATCRLYDLRADREVAIYSKE---------------------SIIFGASSVDFSLSGRLLFAG----- 302 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCT---------------------TCCSCEEEEEECTTSSEEEEE-----
T ss_pred eCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC---------------------CcccceeEEEEeCCCCEEEEE-----
Confidence 999999999999999999999987765544211 112245677888877766654
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
+.|+.|++||+.+++
T Consensus 303 -----------------------------------------------------------------~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 303 -----------------------------------------------------------------YNDYTINVWDVLKGS 317 (354)
T ss_dssp -----------------------------------------------------------------ETTSCEEEEETTTCS
T ss_pred -----------------------------------------------------------------ECCCcEEEEECCCCc
Confidence 478999999999998
Q ss_pred eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 403 PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 403 ~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
.+..+ .+|...|++++|+|||++|++|+.||+|++|+
T Consensus 318 ~~~~l-~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 318 RVSIL-FGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEE-CCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eEEEE-ECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 88877 46999999999999999999999999999995
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-44 Score=359.57 Aligned_cols=311 Identities=23% Similarity=0.365 Sum_probs=257.2
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
..+.+|.++|++++|+|+++ +|++|+.||.|+ |||+.++.... .+..|...|.+
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~-----~l~s~s~D~~v~--------------iWd~~~~~~~~-------~~~~h~~~v~~ 113 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKN-----WIVSASQDGRLI--------------VWNALTSQKTH-------AIKLHCPWVME 113 (380)
T ss_dssp EEECCCSSCEEEEEECTTSS-----CEEEEETTSEEE--------------EEETTTTEEEE-------EEECCCTTCCC
T ss_pred ecccccccEEEEEEEcCCCC-----EEEEEeCCCeEE--------------EEECCCCccce-------EEecCCCCEEE
Confidence 45678999999999999998 999999999999 99987765433 47889999999
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
++|+|+|++|++|+ |+.+++|++...............+.+|.+.|.++.|+|+ +..|++|+.|++|++||+.+++.+
T Consensus 114 ~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~ 193 (380)
T 3iz6_a 114 CAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRI 193 (380)
T ss_dssp CEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEE
T ss_pred EEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEE
Confidence 99999999999998 8999999997643322233445678899999999999996 457999999999999999988754
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECC-CCcEEEEeccCCcceEEEEE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVH-KGKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~~v~~l~~ 242 (621)
..+. .....+|...|.+++|++ ++++|++|+.|+.|++||++ .+..+..+.+|...|.+++|
T Consensus 194 ~~~~----------------~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~ 257 (380)
T 3iz6_a 194 SIFG----------------SEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKF 257 (380)
T ss_dssp EEEC----------------CCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEE
T ss_pred EEee----------------cccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEE
Confidence 2210 011257999999999987 88999999999999999998 45778889999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
+|++++|++++.||+|++||+++++.+..+..+... .......+.+++|+|+|++|++++
T Consensus 258 ~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~----------------~~~~~~~v~~~~~s~~g~~l~~g~---- 317 (380)
T 3iz6_a 258 FPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDR----------------NDNELPIVTSVAFSISGRLLFAGY---- 317 (380)
T ss_dssp CTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSS----------------SCCSSCSCSEEEECSSSSEEEEEC----
T ss_pred ecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccc----------------cccccCceEEEEECCCCCEEEEEE----
Confidence 999999999999999999999999887766432211 011223467888888887777655
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
.||.|++||+..++
T Consensus 318 ------------------------------------------------------------------~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 318 ------------------------------------------------------------------SNGDCYVWDTLLAE 331 (380)
T ss_dssp ------------------------------------------------------------------TTSCEEEEETTTCC
T ss_pred ------------------------------------------------------------------CCCCEEEEECCCCc
Confidence 67889999998888
Q ss_pred eeEEEe---cccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 403 PFAFIA---NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 403 ~~~~~~---~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
.+..+. .+|...|++++|+|||++|++|+.||+|++|++...+
T Consensus 332 ~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 332 MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred eEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 776652 4699999999999999999999999999999988653
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=348.83 Aligned_cols=321 Identities=21% Similarity=0.301 Sum_probs=237.5
Q ss_pred eeeecCCC-CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 7 EISWHNRD-PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 7 ~~~~~h~~-~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
..+..|.+ .|++++|+|+++ +||+|+.|+.|+ ||++..+..... .....+|...|.
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~-----~las~~~D~~i~--------------iw~~~~~~~~~~----~~~~~~h~~~v~ 65 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGT-----LLASCGGDRRIR--------------IWGTEGDSWICK----SVLSEGHQRTVR 65 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSS-----CEEEEETTSCEE--------------EEEEETTEEEEE----EEECSSCSSCEE
T ss_pred eeecCCCCCcEEEEEECCCCC-----EEEEEcCCCeEE--------------EEEcCCCcceee----eeeccccCCcEE
Confidence 34445666 999999999998 999999999999 888876532111 112468999999
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
+++|+|+|++|++|+ |+.+++|+..... ......+.+|...|.+++|+|++++|++|+.|++|++||+.+....
T Consensus 66 ~~~~sp~g~~l~s~s~D~~v~iw~~~~~~-----~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 66 KVAWSPCGNYLASASFDATTCIWKKNQDD-----FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY 140 (345)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEECCC------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCE
T ss_pred EEEECCCCCEEEEEECCCcEEEEEccCCC-----eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCe
Confidence 999999999999998 8899999987652 2456778899999999999999999999999999999999876432
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEeccCCcceEEEEE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK--NLGILTEHKKFVQGVAW 242 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~l~~ 242 (621)
.....+.+|...|.+++|+|++++|++++.|+.|++||+.++. +...+.+|...|.+++|
T Consensus 141 ------------------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~ 202 (345)
T 3fm0_A 141 ------------------ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF 202 (345)
T ss_dssp ------------------EEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred ------------------EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEE
Confidence 1235678899999999999999999999999999999998875 45678899999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
+|++++|++++.|++|++|+.........+. +....+....+....
T Consensus 203 sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~---- 248 (345)
T 3fm0_A 203 DPSGQRLASCSDDRTVRIWRQYLPGNEQGVA------------------------------CSGSDPSWKCICTLS---- 248 (345)
T ss_dssp CTTSSEEEEEETTSCEEEEEEECTTCTTCCC------------------------------CC---CEEEEEEEEC----
T ss_pred CCCCCEEEEEeCCCeEEEeccccCCCCccce------------------------------eeccCCccceeEEec----
Confidence 9999999999999999999974322110000 000000000000000
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
..|...+..+.|+| .+..+++++.|+.|++|+.....
T Consensus 249 ---------------------------~~h~~~v~~v~~~~----------------~~~~l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 249 ---------------------------GFHSRTIYDIAWCQ----------------LTGALATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp ---------------------------SSCSSCEEEEEECT----------------TTCCEEEEETTSCEEEEEECTTS
T ss_pred ---------------------------CCCCCcEEEEEEec----------------CCCEEEEEeCCCeEEEEEeCCCC
Confidence 01223334444443 34455666677778888765542
Q ss_pred --------eeEEEecccccceEEEEEcCCCC-eEEEEeCCCcEEEEEecCCcCCccc
Q psy15549 403 --------PFAFIANIHYTKLTDITWSSDGK-VLIASSTDGYCSIISFGDNEIGIPY 450 (621)
Q Consensus 403 --------~~~~~~~~h~~~v~~~~~spdg~-~l~s~s~dg~i~iw~~~~~~~~~~~ 450 (621)
.......+|...|++++|+|++. +||+|+.||+|++|++.+++....+
T Consensus 286 ~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 286 DPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp CTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred CcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 11222347999999999999984 9999999999999999987755443
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-44 Score=363.16 Aligned_cols=307 Identities=18% Similarity=0.304 Sum_probs=269.5
Q ss_pred cccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcE
Q psy15549 75 SDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTI 153 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i 153 (621)
..+.+|.+.|++++|+|++.+|++|+ |+.|++|++..+ .....+.+|...|.+++|+|++++|++|+.|++|
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~-------~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-------DFERTLKGHTDSVQDISFDHSGKLLASCSADMTI 174 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC-------CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCC
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 45789999999999999999999998 889999999877 5667888999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH 233 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 233 (621)
++||+.+.+.+ ..+.+|...|.+++|+|++++|++|+.|+.|++||+.++.++..+.+|
T Consensus 175 ~iwd~~~~~~~---------------------~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h 233 (410)
T 1vyh_C 175 KLWDFQGFECI---------------------RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 233 (410)
T ss_dssp CEEETTSSCEE---------------------ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEeCCCCcee---------------------EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC
Confidence 99999887643 566799999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
...|.++.|+|++.+|++|+.|+.|++||+.+++....+.. +...|.+++|+|++.+
T Consensus 234 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~-----------------------h~~~v~~~~~~~~~~~ 290 (410)
T 1vyh_C 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-----------------------HRHVVECISWAPESSY 290 (410)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-----------------------CSSCEEEEEECCSCGG
T ss_pred CccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecC-----------------------CCceEEEEEEcCcccc
Confidence 99999999999999999999999999999999887766643 3456789999998875
Q ss_pred EEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcE
Q psy15549 314 LIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNI 393 (621)
Q Consensus 314 l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 393 (621)
...... .+.. ......++.++++++.|+.|
T Consensus 291 ~~~~~~-----~~~~---------------------------------------------~~~~~~~g~~l~sgs~D~~i 320 (410)
T 1vyh_C 291 SSISEA-----TGSE---------------------------------------------TKKSGKPGPFLLSGSRDKTI 320 (410)
T ss_dssp GGGGGC-----CSCC----------------------------------------------------CCEEEEEETTSEE
T ss_pred cchhhh-----cccc---------------------------------------------ccccCCCCCEEEEEeCCCeE
Confidence 433220 0000 00011145789999999999
Q ss_pred EEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCC
Q psy15549 394 LLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSED 473 (621)
Q Consensus 394 ~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 473 (621)
++||+.++.++..+. +|...|++++|+|+|++|++|+.||.|++||+.++++...+..|...+..+.+++++..+++++
T Consensus 321 ~iwd~~~~~~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 321 KMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399 (410)
T ss_dssp EEEETTTTEEEEEEE-CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEE
T ss_pred EEEECCCCceEEEEE-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEe
Confidence 999999999888884 6999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHhcc
Q psy15549 474 KPRSAEQAKG 483 (621)
Q Consensus 474 ~~~~~~~w~~ 483 (621)
.|+.+++|+.
T Consensus 400 ~D~~i~vW~~ 409 (410)
T 1vyh_C 400 VDQTVKVWEC 409 (410)
T ss_dssp TTSEEEEEC-
T ss_pred CCCcEEEEeC
Confidence 9999999974
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=341.03 Aligned_cols=294 Identities=19% Similarity=0.269 Sum_probs=247.5
Q ss_pred ceeeecCCCCeEEEeccccc-cCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQ-EKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~-~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
...+.+|.++|++++|+|++ . +|++|+.|+.|+ +|++...... .......+.+|...|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~-----~l~s~s~D~~v~--------------~W~~~~~~~~--~~~~~~~~~~h~~~v 68 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPN-----LLLSASRDKTLI--------------SWKLTGDDQK--FGVPVRSFKGHSHIV 68 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTT-----EEEEEETTSEEE--------------EEEEEEETTE--EEEEEEEEECCSSCE
T ss_pred EEEEccccceEEEEEccCCCcc-----EEEEecCCccEE--------------EecCCCCCcc--ccccceEEeCCcccE
Confidence 34566899999999999976 5 999999999999 8888654321 112345688999999
Q ss_pred EEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 85 NVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 85 ~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
.+++|+|+|++|++|+ |+.|++||+..+ .....+.+|...|.+++|+|++.+|++|+.|++|++||+....
T Consensus 69 ~~~~~s~dg~~l~s~s~D~~v~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~- 140 (319)
T 3frx_A 69 QDCTLTADGAYALSASWDKTLRLWDVATG-------ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC- 140 (319)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTT-------EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE-
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCC-------CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-
Confidence 9999999999999998 889999999887 6677889999999999999999999999999999999986432
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC------CCEEEEEeCCCeEEEEECCCCcEEEEeccCCcce
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT------STHLISGSVDNTAIMWDVHKGKNLGILTEHKKFV 237 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd------~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v 237 (621)
...+.+|...|.++.|+|. +..|++++.|+.|++||+++++....+.+|...|
T Consensus 141 ---------------------~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v 199 (319)
T 3frx_A 141 ---------------------LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNI 199 (319)
T ss_dssp ---------------------EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCE
T ss_pred ---------------------EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcE
Confidence 3567789999999999984 4589999999999999999999999999999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
.+++|+|++++|++++.||.|++||+.+++.+..+.. ...|.+++|+|++.+|+++
T Consensus 200 ~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~------------------------~~~v~~~~~sp~~~~la~~ 255 (319)
T 3frx_A 200 NTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA------------------------QDEVFSLAFSPNRYWLAAA 255 (319)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC------------------------CSCEEEEEECSSSSEEEEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC------------------------CCcEEEEEEcCCCCEEEEE
Confidence 9999999999999999999999999999988776632 2347899999999888775
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEe
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYD 397 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 397 (621)
. ++.+++|+
T Consensus 256 ~-----------------------------------------------------------------------~~~i~v~~ 264 (319)
T 3frx_A 256 T-----------------------------------------------------------------------ATGIKVFS 264 (319)
T ss_dssp E-----------------------------------------------------------------------TTEEEEEE
T ss_pred c-----------------------------------------------------------------------CCCcEEEE
Confidence 5 22355555
Q ss_pred CCCCceeEEEe-------cccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 398 TQHASPFAFIA-------NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 398 ~~~~~~~~~~~-------~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
+..+..+..+. ..|...+.+++|+|||++|++|+.||.|++|++.++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 265 LDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp ETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred eCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 55544333332 235668999999999999999999999999999864
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-43 Score=339.97 Aligned_cols=296 Identities=18% Similarity=0.310 Sum_probs=252.6
Q ss_pred CccccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccc
Q psy15549 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRH 80 (621)
Q Consensus 1 m~~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h 80 (621)
|+++......+|.+.|++++|+|+++ +|++|+.||.|+ +||+.++... ..+..|
T Consensus 1 ~~l~~~~~~~~h~~~V~~~~fsp~~~-----~l~s~~~dg~v~--------------lWd~~~~~~~-------~~~~~~ 54 (304)
T 2ynn_A 1 MKLDIKKTFSNRSDRVKGIDFHPTEP-----WVLTTLYSGRVE--------------LWNYETQVEV-------RSIQVT 54 (304)
T ss_dssp -CCCCEEEEEEECSCEEEEEECSSSS-----EEEEEETTSEEE--------------EEETTTTEEE-------EEEECC
T ss_pred CcceeEEeecCCCCceEEEEECCCCC-----EEEEEcCCCcEE--------------EEECCCCcee-------EEeecc
Confidence 78888888999999999999999998 999999999999 9998776543 347889
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEcc
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
...|.+++|+|++++|++|+ |+.|++|++..+ ..+..+.+|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 55 ~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~ 127 (304)
T 2ynn_A 55 ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG-------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (304)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGG
T ss_pred CCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC-------cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECC
Confidence 99999999999999999998 888999999887 5677788999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCcce
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKNLGILT-EHKKFV 237 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v 237 (621)
++.. ....+.+|...|.+++|+| ++.+|++|+.|+.|++||+.++.....+. .|...+
T Consensus 128 ~~~~--------------------~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v 187 (304)
T 2ynn_A 128 NNWA--------------------LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV 187 (304)
T ss_dssp GTTE--------------------EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCE
T ss_pred CCcc--------------------hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcE
Confidence 7643 2356789999999999999 67899999999999999998877665553 566789
Q ss_pred EEEEEcC--CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 238 QGVAWDP--KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 238 ~~l~~sp--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
..+.|+| ++.+|++++.|+.|++||+++++.+..+..+ ...|.+++|+|++.+|+
T Consensus 188 ~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h-----------------------~~~v~~~~~~p~~~~l~ 244 (304)
T 2ynn_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH-----------------------MSNVSFAVFHPTLPIII 244 (304)
T ss_dssp EEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECC-----------------------SSCEEEEEECSSSSEEE
T ss_pred EEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCC-----------------------CCCEEEEEECCCCCEEE
Confidence 9999987 7789999999999999999999888776533 34568888888877666
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
+++ .||.|++
T Consensus 245 s~s----------------------------------------------------------------------~Dg~i~i 254 (304)
T 2ynn_A 245 SGS----------------------------------------------------------------------EDGTLKI 254 (304)
T ss_dssp EEE----------------------------------------------------------------------TTSCEEE
T ss_pred EEc----------------------------------------------------------------------CCCeEEE
Confidence 544 7899999
Q ss_pred EeCCCCceeEEEecccccceEEEEEcCCCC--eEEEEeCCCcEEEEEecCC
Q psy15549 396 YDTQHASPFAFIANIHYTKLTDITWSSDGK--VLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~~v~~~~~spdg~--~l~s~s~dg~i~iw~~~~~ 444 (621)
||+.+++.+..+. .|...+.+++|+|++. +|++|+.|| +.+|++...
T Consensus 255 Wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 255 WNSSTYKVEKTLN-VGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGND 303 (304)
T ss_dssp EETTTCCEEEEEC-CSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC--
T ss_pred EECCCCceeeecc-CCCccEEEEEECCCCCceEEEEecCCc-eEEEEeccC
Confidence 9999999888884 5888999999999885 577776555 778887653
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=343.86 Aligned_cols=288 Identities=22% Similarity=0.337 Sum_probs=257.5
Q ss_pred ccccccCcEEEEEEccC----CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC
Q psy15549 76 DLSRHQKAVNVVRFSPN----GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE 150 (621)
Q Consensus 76 ~~~~h~~~V~~l~~spd----g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d 150 (621)
.+.+|.+.|.+++|+|+ +.+|++|+ |+.|+||++.... ......+.+|...|.+++|++++.++++++.|
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~-----~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D 101 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER-----LDLQWSLEGHQLGVVSVDISHTLPIAASSSLD 101 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC-----eeeeeeeccCCCCEEEEEECCCCCEEEEEeCC
Confidence 46789999999999985 67899988 9999999998652 23455688999999999999999999999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
++|++||+.+++.+ ..+..|...+.+++|+|++++|++++.||.|++|++.+++....+
T Consensus 102 ~~i~lWd~~~~~~~---------------------~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~ 160 (321)
T 3ow8_A 102 AHIRLWDLENGKQI---------------------KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL 160 (321)
T ss_dssp SEEEEEETTTTEEE---------------------EEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEE
T ss_pred CcEEEEECCCCCEE---------------------EEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEe
Confidence 99999999988653 556778888999999999999999999999999999999999999
Q ss_pred ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 231 TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 231 ~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
..|...|.+++|+|++++|++++.||.|++||+++++.+..+..+ ...|.+++|+|+
T Consensus 161 ~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h-----------------------~~~v~~l~~spd 217 (321)
T 3ow8_A 161 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH-----------------------AMPIRSLTFSPD 217 (321)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-----------------------SSCCCEEEECTT
T ss_pred cCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccc-----------------------CCceeEEEEcCC
Confidence 999999999999999999999999999999999999887776533 345688999999
Q ss_pred CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 311 g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
+++|++++ .|
T Consensus 218 ~~~l~s~s----------------------------------------------------------------------~d 227 (321)
T 3ow8_A 218 SQLLVTAS----------------------------------------------------------------------DD 227 (321)
T ss_dssp SCEEEEEC----------------------------------------------------------------------TT
T ss_pred CCEEEEEc----------------------------------------------------------------------CC
Confidence 88877765 67
Q ss_pred CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcc
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVR 470 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (621)
+.|++||+.+++....+ .+|...|.+++|+|+|++|++++.||+|++||+.++++...+..|...+..+.+++++..++
T Consensus 228 g~i~iwd~~~~~~~~~~-~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~ 306 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGTL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIV 306 (321)
T ss_dssp SCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CeEEEEECCCcceeEEE-cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEE
Confidence 89999999998888777 56999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccHHHhcc
Q psy15549 471 SEDKPRSAEQAKG 483 (621)
Q Consensus 471 s~~~~~~~~~w~~ 483 (621)
+++.|+.+++|+.
T Consensus 307 s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 307 SVGDDQEIHIYDC 319 (321)
T ss_dssp EEETTCCEEEEEC
T ss_pred EEeCCCeEEEEeC
Confidence 9999999999985
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=407.35 Aligned_cols=401 Identities=18% Similarity=0.195 Sum_probs=316.2
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
....|.+.|++++|+|+++ +||+|+.||.|+ +||+.++.... .+.+|.+.|.++
T Consensus 610 ~~~~h~~~v~~~~~s~~~~-----~l~s~~~d~~i~--------------vw~~~~~~~~~-------~~~~h~~~v~~~ 663 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQ-----RIASCGADKTLQ--------------VFKAETGEKLL-------DIKAHEDEVLCC 663 (1249)
T ss_dssp EECCCSSCEEEEEECTTSS-----EEEEEETTSCEE--------------EEETTTCCEEE-------EECCCSSCEEEE
T ss_pred EEecccccEEEEEECCCCC-----EEEEEeCCCeEE--------------EEECCCCCEEE-------EeccCCCCEEEE
Confidence 3457999999999999999 999999999999 99988776433 478999999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC--CCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--NGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp--~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
+|+|+|++|++++ |+.|++|++..+ ..+..+.+|...|.+++|+| ++.++++|+.|+.|++||+.++...
T Consensus 664 ~~s~~~~~l~s~~~d~~v~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~ 736 (1249)
T 3sfz_A 664 AFSSDDSYIATCSADKKVKIWDSATG-------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR 736 (1249)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEE
T ss_pred EEecCCCEEEEEeCCCeEEEEECCCC-------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchh
Confidence 9999999999988 888999999887 66778889999999999999 5568999999999999999988743
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe--------------
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL-------------- 230 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~-------------- 230 (621)
..+.+|...|++++|+|++++|++++.||.|++||+.++.....+
T Consensus 737 ---------------------~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1249)
T 3sfz_A 737 ---------------------NTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPE 795 (1249)
T ss_dssp ---------------------EEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------
T ss_pred ---------------------heecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccc
Confidence 667799999999999999999999999999999999876544332
Q ss_pred -----------------------------------------ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceee
Q psy15549 231 -----------------------------------------TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVI 269 (621)
Q Consensus 231 -----------------------------------------~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 269 (621)
.+|...|.+++|+|+++++++++.||.|++||+.++..+
T Consensus 796 ~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~ 875 (1249)
T 3sfz_A 796 DVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKV 875 (1249)
T ss_dssp CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEE
T ss_pred cccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence 157788999999999999999999999999999999888
Q ss_pred eecccCCCCCCCccc----------cccccccccccC-------------------------------------------
Q psy15549 270 SRACRSKLPVDSSHE----------LFDKVVPLFHDD------------------------------------------- 296 (621)
Q Consensus 270 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~------------------------------------------- 296 (621)
..+..+...+....- ..+..+.+|...
T Consensus 876 ~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1249)
T 3sfz_A 876 ADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQ 955 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCC
T ss_pred eecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcce
Confidence 777666543321100 011122222100
Q ss_pred ---CcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeeccc---CCCc------------------------
Q psy15549 297 ---TMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACL---NKPA------------------------ 346 (621)
Q Consensus 297 ---~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~---~~~~------------------------ 346 (621)
.....+.+++|+|+++++++++ .++.+.+|+.......... ...+
T Consensus 956 ~~~~~~~~i~~~~~sp~g~~l~~g~-----~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vw 1030 (1249)
T 3sfz_A 956 IDYLPEAQVSCCCLSPHLEYVAFGD-----EDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVW 1030 (1249)
T ss_dssp EEEECCSCEEEEEECTTSSEEEEEE-----TTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEE
T ss_pred EEEcccCcEEEEEEcCCCCEEEEEc-----CCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 0123456666666666666666 5666666664322111110 0000
Q ss_pred -------eecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEE
Q psy15549 347 -------VCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDIT 419 (621)
Q Consensus 347 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~ 419 (621)
.....+...+.++.+ .++..+++++.|+.|++||+.+++.+..+ .+|...|++++
T Consensus 1031 d~~~~~~~~~~~~~~~v~~~~~-----------------~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~~~~v~~~~ 1092 (1249)
T 3sfz_A 1031 NWQTGDYVFLQAHQETVKDFRL-----------------LQDSRLLSWSFDGTVKVWNVITGRIERDF-TCHQGTVLSCA 1092 (1249)
T ss_dssp ETTTTEEECCBCCSSCEEEEEE-----------------CSSSEEEEEESSSEEEEEETTTTCCCEEE-ECCSSCCCCEE
T ss_pred ECCCCceEEEecCCCcEEEEEE-----------------cCCCcEEEEECCCcEEEEECCCCceeEEE-cccCCcEEEEE
Confidence 011122222223222 34577899999999999999999988888 46999999999
Q ss_pred EcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 420 WSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 420 ~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
|+|+|++|++++.||+|++|++.++.....+..|...+..+.+++++..+++++.|+.+++|++..
T Consensus 1093 ~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~ 1158 (1249)
T 3sfz_A 1093 ISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSD 1158 (1249)
T ss_dssp ECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSS
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 999999999999999999999999999999999999999999999999999999999999999664
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-43 Score=348.24 Aligned_cols=300 Identities=15% Similarity=0.214 Sum_probs=234.1
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
..|.+.|++|+|||||+ +||+|+.|.. ++||.. +++|+...+..... +.....+|...|.+++|
T Consensus 39 ~~H~~~V~~v~fSpDG~-----~las~s~d~~-~~wd~~-------v~~~~~~~~~~~~~---~~~~~~~~~~~V~~~~~ 102 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGA-----LLLAASSLSS-RTWGGS-------IWVFKDPEGAPNES---LCTAGVQTEAGVTDVAW 102 (357)
T ss_dssp -CCCSEEEEEEECSSSC-----EEEEEECSSS-SSCCEE-------EEEESSCC---CGG---GCSEEEECSSCEEEEEE
T ss_pred ccccCCEEEEEECCCCC-----EEEEEcCCCC-ccccCe-------EEEEECCCCCccee---EecccCCCCCCEEEEEE
Confidence 45899999999999999 9999998432 333211 11777766543222 22345678999999999
Q ss_pred ccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 90 SPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 90 spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
+|++++|+++.++.|+||++..+.... .......+|...|++++|+|++++|++|+.|+.|++||+.+++.+
T Consensus 103 s~d~~~l~~s~dg~v~lWd~~~~~~~~---~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~----- 174 (357)
T 4g56_B 103 VSEKGILVASDSGAVELWEILEKESLL---VNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVL----- 174 (357)
T ss_dssp ETTTEEEEEETTSCEEEC--------C---CCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEE-----
T ss_pred cCCCCEEEEECCCEEEEeeccccceeE---EEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE-----
Confidence 999998888889999999998763211 112234579999999999999999999999999999999988643
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEec--cCCcceEEEEEcCC-
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST-HLISGSVDNTAIMWDVHKGKNLGILT--EHKKFVQGVAWDPK- 245 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~-~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~~l~~sp~- 245 (621)
..+.+|...|++++|+|++. ++++++.||.|++||++++++...+. .+...+.+++|+|+
T Consensus 175 ----------------~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~ 238 (357)
T 4g56_B 175 ----------------KSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEK 238 (357)
T ss_dssp ----------------EEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTS
T ss_pred ----------------EEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcc
Confidence 66789999999999999874 78999999999999999988766553 46778999999997
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC-eEEeccccccCC
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ-LLIAPSGCLENS 324 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~-~l~~~s~~~~~~ 324 (621)
+.+|++|+.|+.|++||+++++.+..+.. +...|.+++|+|++. +|+
T Consensus 239 ~~~la~g~~d~~i~~wd~~~~~~~~~~~~-----------------------~~~~v~~l~~sp~~~~~la--------- 286 (357)
T 4g56_B 239 DDTFACGDETGNVSLVNIKNPDSAQTSAV-----------------------HSQNITGLAYSYHSSPFLA--------- 286 (357)
T ss_dssp TTEEEEEESSSCEEEEESSCGGGCEEECC-----------------------CSSCEEEEEECSSSSCCEE---------
T ss_pred cceEEEeecccceeEEECCCCcEeEEEec-----------------------cceeEEEEEEcCCCCCEEE---------
Confidence 46889999999999999999887666542 344578899998864 344
Q ss_pred CCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCcee
Q psy15549 325 DSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPF 404 (621)
Q Consensus 325 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 404 (621)
+++.|++|+|||+.+++.+
T Consensus 287 -------------------------------------------------------------sgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 287 -------------------------------------------------------------SISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp -------------------------------------------------------------EEETTSCEEEECTTSCEEE
T ss_pred -------------------------------------------------------------EEeCCCEEEEEECCCCcEe
Confidence 3457899999999998877
Q ss_pred EEEecccccceEEEEEcC-CCCeEEEEeCCCcEEEEEecCC
Q psy15549 405 AFIANIHYTKLTDITWSS-DGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 405 ~~~~~~h~~~v~~~~~sp-dg~~l~s~s~dg~i~iw~~~~~ 444 (621)
..+ +|...|++++|+| |+++|++++.||+|++|++.+.
T Consensus 306 ~~~--~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 306 RDL--SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEC--CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEC--CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 654 5999999999998 8999999999999999999754
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=341.58 Aligned_cols=302 Identities=17% Similarity=0.236 Sum_probs=232.8
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
..|...|.+++|+|||+ +|++++ |+.+++||.. +|.+........ .........|...|.+++|
T Consensus 27 ~~~~~~v~~~~fs~dG~-----~l~~~s-d~~~r~Wd~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~ 90 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGA-----LLLGAS-SLSGRCWAGS---------LWLFKDPCAAPN-EGFCSAGVQTEAGVADLTW 90 (344)
T ss_dssp SSCCSEEEEEEECTTSC-----EEEEEE-CCSSSCCCEE---------EEEESSGGGTTC-GGGCSEEEEESSCEEEEEE
T ss_pred ccccCCEEEEEECCCCC-----EEEEEe-CCceEEeece---------eeeeccccccCC-cceeeeeeccCCCEEEEEE
Confidence 35677899999999998 888877 7788855432 333322211110 0011123346778999999
Q ss_pred ccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 90 SPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 90 spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
+|++.+++++.|+.|+||++..+... ......+.+|...|++++|+|+|++|++|+.|++|++||+.+++.+
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~---~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~----- 162 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETL---IVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL----- 162 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSC---EEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-----
T ss_pred eCCCeEEEEECCCEEEEEeccCCCce---eEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE-----
Confidence 99976555555999999999876421 1222345689999999999999999999999999999999988753
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEec--cCCcceEEEEEcCC-
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKGKNLGILT--EHKKFVQGVAWDPK- 245 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~~l~~sp~- 245 (621)
..+.+|...|++++|+|++ .+|++++.|+.|++||+++++....+. .+...+.+++|+|+
T Consensus 163 ----------------~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 226 (344)
T 4gqb_B 163 ----------------SSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQ 226 (344)
T ss_dssp ----------------EEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSC
T ss_pred ----------------EEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCC
Confidence 6778999999999999988 478999999999999999999888774 35567899999995
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC-eEEeccccccCC
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ-LLIAPSGCLENS 324 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~-~l~~~s~~~~~~ 324 (621)
+++|++|+.||.|++||+++++.+..+.. +...|++++|+|++. +|++
T Consensus 227 ~~~l~sg~~dg~v~~wd~~~~~~~~~~~~-----------------------h~~~v~~v~fsp~g~~~las-------- 275 (344)
T 4gqb_B 227 SEVFVFGDENGTVSLVDTKSTSCVLSSAV-----------------------HSQCVTGLVFSPHSVPFLAS-------- 275 (344)
T ss_dssp TTEEEEEETTSEEEEEESCC--CCEEEEC-----------------------CSSCEEEEEECSSSSCCEEE--------
T ss_pred CcceEEeccCCcEEEEECCCCcEEEEEcC-----------------------CCCCEEEEEEccCCCeEEEE--------
Confidence 57889999999999999999888776653 345678999999874 4444
Q ss_pred CCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCcee
Q psy15549 325 DSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPF 404 (621)
Q Consensus 325 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 404 (621)
++.|++|+|||+.+++.+
T Consensus 276 --------------------------------------------------------------gs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 276 --------------------------------------------------------------LSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp --------------------------------------------------------------EETTSCEEEECTTCCEEE
T ss_pred --------------------------------------------------------------EeCCCeEEEEECCCCcEE
Confidence 457899999999988765
Q ss_pred EEEecccccceEEEEEcCCCC-eEEEEeCCCcEEEEEecCCcC
Q psy15549 405 AFIANIHYTKLTDITWSSDGK-VLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 405 ~~~~~~h~~~v~~~~~spdg~-~l~s~s~dg~i~iw~~~~~~~ 446 (621)
. + .+|...|++++|+|+++ +|++++.||+|++|++.+..+
T Consensus 294 ~-~-~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 294 R-S-QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp E-E-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred E-E-cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 4 3 47999999999999987 567899999999999987554
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-42 Score=340.46 Aligned_cols=299 Identities=22% Similarity=0.277 Sum_probs=238.2
Q ss_pred ceeeecCCCCeEEEec-----cc-cccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccc
Q psy15549 6 PEISWHNRDPVLSVDI-----QL-KQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSR 79 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~-----sp-d~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~ 79 (621)
...+.+|.++|++++| ++ +++ +||+|+.|+.|+ +|++...............+.+
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~-----~l~sgs~D~~v~--------------iWd~~~~~~~~~~~~~~~~l~~ 74 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSP-----VLISGSRDKTVM--------------IWKLYEEEQNGYFGIPHKALTG 74 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCC-----EEEEEETTSCEE--------------EEEECSSCCSSBSEEEEEEECC
T ss_pred eeeeccchhhhhheeeEEEeecCCCCC-----EEEEEcCCCEEE--------------EEECCcCCcccccccccchhcc
Confidence 3456789999999999 66 887 999999999999 8888755432222233456889
Q ss_pred ccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy15549 80 HQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~ 158 (621)
|...|.+++|+|++.+|++|+ |+.|++|++..+ .....+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 75 h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~-------~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 75 HNHFVSDLALSQENCFAISSSWDKTLRLWDLRTG-------TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp CSSCEEEEEECSSTTEEEEEETTSEEEEEETTSS-------CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-------cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 999999999999999999998 889999999877 566778899999999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC----------CEEEEEeCCCeEEEEECCCCcEEE
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS----------THLISGSVDNTAIMWDVHKGKNLG 228 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~----------~~l~s~~~dg~i~vwd~~~~~~~~ 228 (621)
...... . .....+|...|.+++|+|++ .+|++++.|+.|++|| .+.+...
T Consensus 148 ~~~~~~-~------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~ 207 (343)
T 2xzm_R 148 LGECKF-S------------------SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRY 207 (343)
T ss_dssp SSCEEE-E------------------CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEE
T ss_pred cCCcee-e------------------eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeE
Confidence 743211 0 01223788999999999987 7899999999999999 4667778
Q ss_pred EeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCce-eeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 229 ILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKK-VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 229 ~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
.+.+|...|.+++|+|+|++|++|+.||.|++||+.... ....+ .....|.+++|
T Consensus 208 ~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~------------------------~~~~~v~~v~~ 263 (343)
T 2xzm_R 208 TFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREF------------------------DAGSTINQIAF 263 (343)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEE------------------------ECSSCEEEEEE
T ss_pred EEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceee------------------------cCCCcEEEEEE
Confidence 888999999999999999999999999999999985432 22111 11234788999
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
+|++.+++++
T Consensus 264 sp~~~~la~~---------------------------------------------------------------------- 273 (343)
T 2xzm_R 264 NPKLQWVAVG---------------------------------------------------------------------- 273 (343)
T ss_dssp CSSSCEEEEE----------------------------------------------------------------------
T ss_pred CCCCCEEEEE----------------------------------------------------------------------
Confidence 9988776543
Q ss_pred EcCCcEEEEeCCCCceeE--EEe----------cccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 388 ATENNILLYDTQHASPFA--FIA----------NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 388 ~~dg~i~iwd~~~~~~~~--~~~----------~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
.|+.|++||+.+++... .+. .+|...|++++|+|+|++|++|+.||.|++|++.++.
T Consensus 274 -~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 274 -TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp -ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred -CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 23445555555443322 111 2577889999999999999999999999999998653
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=384.08 Aligned_cols=426 Identities=14% Similarity=0.148 Sum_probs=292.2
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
...+|.+.|++|+|+|+++ +||+|+.||.|+ ||+....+... ...|...|.++
T Consensus 12 ~~~gh~~~V~~lafspdg~-----~lAsgs~Dg~I~--------------lw~~~~~~~~~--------~~~~~~~V~~l 64 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQN-----LLAIATVTGEVH--------------IYGQQQVEVVI--------KLEDRSAIKEM 64 (902)
T ss_dssp EEEECSSCEEEEEEETTTT-----EEEEEETTSEEE--------------EECSTTCEEEE--------ECSSCCCEEEE
T ss_pred cccCCCCCcEEEEECCCCC-----EEEEEeCCCEEE--------------EEeCCCcEEEE--------EcCCCCCEEEE
Confidence 4567899999999999999 999999999999 88876543211 23478899999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
+|+| |++|++++ |+.|++|++..+ ..+..+. |...|++++|+|++++|++|+.||.|++||+.++... .
T Consensus 65 ~fsp-g~~L~S~s~D~~v~lWd~~~~-------~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~ 134 (902)
T 2oaj_A 65 RFVK-GIYLVVINAKDTVYVLSLYSQ-------KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-S 134 (902)
T ss_dssp EEET-TTEEEEEETTCEEEEEETTTC-------SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-E
T ss_pred EEcC-CCEEEEEECcCeEEEEECCCC-------cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-c
Confidence 9999 88888887 889999999876 3444443 6689999999999999999999999999999876531 0
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEeccC------------
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHKGKNLGILTEH------------ 233 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~------------ 233 (621)
+.. ...|.....+.+|...|++++|+|+ +..|++|+.||.| +||+++++.+..+..|
T Consensus 135 ~~i---------~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~ 204 (902)
T 2oaj_A 135 FKL---------DNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSE 204 (902)
T ss_dssp EEE---------CCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCC
T ss_pred cee---------ccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccc
Confidence 000 0000000234679999999999996 5789999999999 9999999988888765
Q ss_pred ------CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeee--cccCCCCCCCccccccccccccccCCcccceeee
Q psy15549 234 ------KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISR--ACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL 305 (621)
Q Consensus 234 ------~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 305 (621)
...|.+++|+|+|++|++++.||.|++||+++++.+.. +......... .. .......+...|.++
T Consensus 205 ~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~-~~------~~~~~~~~~~~V~~v 277 (902)
T 2oaj_A 205 KTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQ-PD------YIRDSSTNAAKISKV 277 (902)
T ss_dssp CTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCC-TT------CCCCCSSCCCEEEEE
T ss_pred ccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCC-Cc------CCCCCccccCCeeEE
Confidence 46799999999999999999999999999999887653 2100000000 00 000000123356777
Q ss_pred eec----CCC-CeEEeccccccCCCCCCcceeeee-----------------------eeeeccc---------------
Q psy15549 306 TFS----PDG-QLLIAPSGCLENSDSTRKPISVTH-----------------------VFTRACL--------------- 342 (621)
Q Consensus 306 ~~s----pdg-~~l~~~s~~~~~~d~~i~~~~~~~-----------------------~~~~~~~--------------- 342 (621)
+|+ |++ .+|++++.........+.+|++.. .+.....
T Consensus 278 ~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~ 357 (902)
T 2oaj_A 278 YWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPY 357 (902)
T ss_dssp EEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSH
T ss_pred EEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCC
Confidence 774 443 334444311000112444444210 0000000
Q ss_pred ----C-----------C------------------CceecCCcccceeeeecccee---------------eecC---CC
Q psy15549 343 ----N-----------K------------------PAVCLPSLQYYSVAVKCCPVL---------------FELK---PS 371 (621)
Q Consensus 343 ----~-----------~------------------~~~~~~~~~~~~~~~~~~~~~---------------~~~~---~~ 371 (621)
. . ....+..+...+.++.+.+.- ..+. ..
T Consensus 358 ~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~ 437 (902)
T 2oaj_A 358 FAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRT 437 (902)
T ss_dssp HHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCC
T ss_pred cCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCC
Confidence 0 0 000111122223333322100 0000 00
Q ss_pred CCCCCccCCCcEEEEEEcCCcEEEEeCCCCcee----EEEe------cccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 372 DDKPLFKLPYRIVIAVATENNILLYDTQHASPF----AFIA------NIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 372 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~------~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
.....|+++++.+++++.|++|++||+.++... .... .+|...|++++|+|||++||+|+.||+|+||++
T Consensus 438 v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~ 517 (902)
T 2oaj_A 438 KRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKY 517 (902)
T ss_dssp CCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred CCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEe
Confidence 112345678899999999999999999887532 1111 168889999999999999999999999999999
Q ss_pred cCCc---------------------------------------------CCcccCCCCCcccccCCCCCCCCcccCCCcc
Q psy15549 442 GDNE---------------------------------------------IGIPYVPPSGEESKENDPTKGEPVRSEDKPR 476 (621)
Q Consensus 442 ~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 476 (621)
.+++ +...+..|...+..+.|+|+| .+++++.|+
T Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~ 596 (902)
T 2oaj_A 518 EVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAG 596 (902)
T ss_dssp EECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTS
T ss_pred cCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCC
Confidence 9773 245567788999999999999 999999999
Q ss_pred cHHHhcccCccc
Q psy15549 477 SAEQAKGEGKVL 488 (621)
Q Consensus 477 ~~~~w~~~~~~~ 488 (621)
.|++|++++..+
T Consensus 597 tv~lwd~~~~~~ 608 (902)
T 2oaj_A 597 SLMLIDRRGPAI 608 (902)
T ss_dssp EEEEEETTTTEE
T ss_pred cEEEEECCCCeE
Confidence 999999877543
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=334.14 Aligned_cols=311 Identities=19% Similarity=0.324 Sum_probs=228.0
Q ss_pred ccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccc-cc-cc
Q psy15549 4 TIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDL-SR-HQ 81 (621)
Q Consensus 4 ~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~-~~-h~ 81 (621)
+....+..|.++|++++|+|+ +||+|+.|+.|+ +|++..+... ....+ .+ |.
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~-------~las~~~D~~i~--------------lw~~~~~~~~-----~~~~~~~~~h~ 58 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG-------ILATGSTDRKIK--------------LVSVKYDDFT-----LIDVLDETAHK 58 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT-------EEEEEESSSCEE--------------EEECSSSCCE-----EEEEECTTCCC
T ss_pred ccceeeccCCCceeeeccCCC-------EEEEEcCCCEEE--------------EEEecCCCeE-----EEEEEecCCcc
Confidence 344566789999999999986 899999999999 8888754221 12223 34 99
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
..|.+++|+|++++|++|+ |+.|+||++...............+.+|...|.+++|+|++++|++|+.|++|++||+..
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~ 138 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDE 138 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCT
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccC
Confidence 9999999999999999998 899999998643211112245667889999999999999999999999999999999954
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC--cEEEEeccCCcceE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG--KNLGILTEHKKFVQ 238 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~ 238 (621)
.... +.....+.+|...|.+++|+|++.+|++++.|+.|++||+.++ +++..+.+|...|.
T Consensus 139 ~~~~-----------------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~ 201 (330)
T 2hes_X 139 SGEE-----------------YECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVW 201 (330)
T ss_dssp TCCC-----------------CEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred CCCC-----------------eEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEE
Confidence 3211 1123667899999999999999999999999999999999876 67888999999999
Q ss_pred EEEEcCC--CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccc-cCCcccceeeeeecCCCCeEE
Q psy15549 239 GVAWDPK--NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFH-DDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 239 ~l~~sp~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~spdg~~l~ 315 (621)
+++|+|+ +.+|++++.|++|++||+..+...... ....... ...+...|.+++|+++
T Consensus 202 ~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~---------------~~~~~~~~~~~h~~~v~~v~~s~~----- 261 (330)
T 2hes_X 202 SSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ---------------EWVCEAILPDVHKRQVYNVAWGFN----- 261 (330)
T ss_dssp EEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE---------------EEEEEEECCSCCSSCEEEEEECTT-----
T ss_pred EEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc---------------eeEEeeecccccccceEEEEEcCC-----
Confidence 9999998 778999999999999998754210000 0000000 0112334455555433
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
+.|++++.||.|++
T Consensus 262 ------------------------------------------------------------------~~l~s~~~dg~v~i 275 (330)
T 2hes_X 262 ------------------------------------------------------------------GLIASVGADGVLAV 275 (330)
T ss_dssp ------------------------------------------------------------------SCEEEEETTSCEEE
T ss_pred ------------------------------------------------------------------CEEEEEeCCCEEEE
Confidence 34566668889999
Q ss_pred EeCCCCc--eeEEEeccccc-ceEEEEEcC--CCCeEEEEeCCCcEEEEEecC
Q psy15549 396 YDTQHAS--PFAFIANIHYT-KLTDITWSS--DGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 396 wd~~~~~--~~~~~~~~h~~-~v~~~~~sp--dg~~l~s~s~dg~i~iw~~~~ 443 (621)
||..++. .+.....+|.. .|.+++|+| ++++||+|+.||+|+||++.+
T Consensus 276 w~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 276 YEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 9987764 33333346776 899999999 789999999999999999864
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-42 Score=368.41 Aligned_cols=406 Identities=15% Similarity=0.133 Sum_probs=313.4
Q ss_pred ceeeecCCCC-eEEEeccc--cccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccc-cccceeecccccccc
Q psy15549 6 PEISWHNRDP-VLSVDIQL--KQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERES-GIANVEFASDLSRHQ 81 (621)
Q Consensus 6 ~~~~~~h~~~-v~~l~~sp--d~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~-~~~~~~~~~~~~~h~ 81 (621)
......|.+. |++++|+| +++ +||+|+.||.|+ +|++.++.. ..........+..|.
T Consensus 56 ~~~~~~h~~~~v~~~~~sp~~~~~-----~l~s~~~dg~v~--------------vw~~~~~~~~~~~~~~~~~~~~~~~ 116 (615)
T 1pgu_A 56 VVQFTGHGSSVVTTVKFSPIKGSQ-----YLCSGDESGKVI--------------VWGWTFDKESNSVEVNVKSEFQVLA 116 (615)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCC-----EEEEEETTSEEE--------------EEEEEEEGGGTEEEEEEEEEEECCS
T ss_pred ceEEecCCCceEEEEEECcCCCCC-----EEEEecCCCEEE--------------EEeCCCCcccccccccccchhhccc
Confidence 3455678899 99999999 998 999999999999 998865410 000122344578899
Q ss_pred CcEEEEEEccCCCEEEEEcCC-----ceEEEEeccCccccccceecccccccCCCeEEEEECCCCC-EEEEEeCCCcEEE
Q psy15549 82 KAVNVVRFSPNGELLASGDDV-----GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE-LLASGDDESTIIV 155 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d~-----~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~-~l~s~s~dg~i~v 155 (621)
..|.+++|+|++++|++++++ .|.+|+ .+ .....+.+|...|.+++|+|+++ +|++++.|+.|++
T Consensus 117 ~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~v 187 (615)
T 1pgu_A 117 GPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SG-------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVF 187 (615)
T ss_dssp SCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TC-------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEE
T ss_pred ccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CC-------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEE
Confidence 999999999999999998843 567776 33 45667889999999999999998 8999999999999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCC---CeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEe-
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLE---DVYDISWSPT-STHLISGSVDNTAIMWDVHKGKNLGIL- 230 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~~~~~- 230 (621)
||+.+.+. ...+.+|.. .|.+++|+|+ +++|++++.||.|++||+.+++.+..+
T Consensus 188 wd~~~~~~---------------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 246 (615)
T 1pgu_A 188 YQGPPFKF---------------------SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIE 246 (615)
T ss_dssp EETTTBEE---------------------EEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECC
T ss_pred EeCCCcce---------------------eeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEec
Confidence 99887764 356778888 9999999999 999999999999999999999999998
Q ss_pred c---cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCC---------ccc----cccccccc--
Q psy15549 231 T---EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDS---------SHE----LFDKVVPL-- 292 (621)
Q Consensus 231 ~---~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---------~~~----~~~~~~~~-- 292 (621)
. .|...|.+++|+ ++++|++++.|+.|++||+++++.+..+..+..+... +.. ..+....+
T Consensus 247 ~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d 325 (615)
T 1pgu_A 247 DDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 325 (615)
T ss_dssp BTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEE
T ss_pred ccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEE
Confidence 6 899999999999 9999999999999999999999887776654211100 000 00011111
Q ss_pred -------ccc---------------------------------CCcccceeeeeecCCCCeEEeccccccCCCCCCccee
Q psy15549 293 -------FHD---------------------------------DTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPIS 332 (621)
Q Consensus 293 -------~~~---------------------------------~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~ 332 (621)
... ..+...|.+++| +++..|++++ .|+.+++|+
T Consensus 326 ~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~-----~d~~i~~~~ 399 (615)
T 1pgu_A 326 LGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSIS-----WDDTLKVNG 399 (615)
T ss_dssp TTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEE-----TTTEEEETT
T ss_pred CCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEe-----CCCCEEEEE
Confidence 111 234445566666 4466677766 677888887
Q ss_pred eeeeeeec-------------------------c--cCCCc---------------------------------------
Q psy15549 333 VTHVFTRA-------------------------C--LNKPA--------------------------------------- 346 (621)
Q Consensus 333 ~~~~~~~~-------------------------~--~~~~~--------------------------------------- 346 (621)
+....... . .....
T Consensus 400 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~ 479 (615)
T 1pgu_A 400 ITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEV 479 (615)
T ss_dssp EEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEE
T ss_pred cccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccc
Confidence 65421000 0 00000
Q ss_pred --eecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcC--
Q psy15549 347 --VCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSS-- 422 (621)
Q Consensus 347 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp-- 422 (621)
..+..+...+.+ ..+++++++|++++.|+.|++||+.+++.+..+...|...|++++|+|
T Consensus 480 ~~~~~~~~~~~v~~----------------~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 543 (615)
T 1pgu_A 480 SFDLKTPLRAKPSY----------------ISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAE 543 (615)
T ss_dssp EEECSSCCSSCEEE----------------EEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC
T ss_pred cccccCCccCceEE----------------EEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcc
Confidence 111112222222 334558899999999999999999999988877444999999999999
Q ss_pred --------CCCeEEEEeCCCcEEEEEecCC-cCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhccc
Q psy15549 423 --------DGKVLIASSTDGYCSIISFGDN-EIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 423 --------dg~~l~s~s~dg~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
++++|++++.||.|++|++.++ .+...+..|...+..+.|++++. +++++.|+.+++|++.
T Consensus 544 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 544 KGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp ------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred ccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 9999999999999999999998 78888999999999999999999 9999999999999875
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=336.05 Aligned_cols=327 Identities=15% Similarity=0.189 Sum_probs=276.0
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
|.++|.+++|+|||+ +++++..++.+. +|......... ...+|...|.+++|+|
T Consensus 8 ~~~~v~~~~~s~dg~-----~~~~~~~~~~~~--------------~~~~~~~~~~~-------~~~~h~~~v~~~~~~~ 61 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQ-----MQPVPFPPDALI--------------GPGIPRHARQI-------NTLNHGEVVCAVTISN 61 (337)
T ss_dssp EEEECCEEEECSSSC-----EEECCCCTTSSS--------------STTCCSEEEEE-------EEECCSSCCCEEEECS
T ss_pred cCCceeEEEECCCCC-----EEEeecCCCcEe--------------ccccCCccccc-------eeccCCCceEEEEEec
Confidence 566899999999998 998888777666 65443332211 2457999999999999
Q ss_pred CCCEEEEEcCCceEEEEeccCccccccceecccc--cccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 92 NGELLASGDDVGKEIWYLTERESGIANVEFASDL--SRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 92 dg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
++++|++++++.+++|++..+... .....+ .+|...|.+++|+|++++|++++.||.|++||+.+++..
T Consensus 62 ~~~~l~~~~dg~i~iw~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~----- 132 (337)
T 1gxr_A 62 PTRHVYTGGKGCVKVWDISHPGNK----SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR----- 132 (337)
T ss_dssp SSSEEEEECBSEEEEEETTSTTCC----SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--E-----
T ss_pred CCcEEEEcCCCeEEEEECCCCCce----eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcc-----
Confidence 999999999999999999876321 122222 278899999999999999999999999999999887532
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEE
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYV 249 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 249 (621)
....+..|...|.+++|+|++++|++++.||.|++||+++++.+..+..|...|.+++|+|++++|
T Consensus 133 --------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 198 (337)
T 1gxr_A 133 --------------IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKL 198 (337)
T ss_dssp --------------EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred --------------eeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEE
Confidence 235667899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCc
Q psy15549 250 ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRK 329 (621)
Q Consensus 250 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~ 329 (621)
++++.||.|++||+++++.+..+. +...+.+++|+|+++++++++ .++.++
T Consensus 199 ~~~~~dg~i~~~d~~~~~~~~~~~------------------------~~~~v~~~~~s~~~~~l~~~~-----~~~~i~ 249 (337)
T 1gxr_A 199 WTGGLDNTVRSWDLREGRQLQQHD------------------------FTSQIFSLGYCPTGEWLAVGM-----ESSNVE 249 (337)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEE------------------------CSSCEEEEEECTTSSEEEEEE-----TTSCEE
T ss_pred EEEecCCcEEEEECCCCceEeeec------------------------CCCceEEEEECCCCCEEEEEc-----CCCcEE
Confidence 999999999999999988766542 234578999999999999998 899999
Q ss_pred ceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEec
Q psy15549 330 PISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIAN 409 (621)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 409 (621)
+|++... ....+..+...+..+.|+| +++++++++.||.|++||+.+++.+...
T Consensus 250 ~~~~~~~--------~~~~~~~~~~~v~~~~~~~----------------~~~~l~~~~~dg~i~~~~~~~~~~~~~~-- 303 (337)
T 1gxr_A 250 VLHVNKP--------DKYQLHLHESCVLSLKFAY----------------CGKWFVSTGKDNLLNAWRTPYGASIFQS-- 303 (337)
T ss_dssp EEETTSS--------CEEEECCCSSCEEEEEECT----------------TSSEEEEEETTSEEEEEETTTCCEEEEE--
T ss_pred EEECCCC--------CeEEEcCCccceeEEEECC----------------CCCEEEEecCCCcEEEEECCCCeEEEEe--
Confidence 9997632 2334566777888888887 7789999999999999999999888554
Q ss_pred ccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 410 IHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 410 ~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
.|...|++++|+|++++|++++.||.|++|++.
T Consensus 304 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 304 KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 388899999999999999999999999999974
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=371.24 Aligned_cols=406 Identities=15% Similarity=0.153 Sum_probs=310.2
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCc-EEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA-VNV 86 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~-V~~ 86 (621)
....|.+.|.+++|+|+++ +|++++ ++.|+ ||++.++... .+....+.+|... |.+
T Consensus 13 ~~~~~~~~v~~~~~spdg~-----~l~~~~-~~~v~--------------v~~~~~~~~~---~~~~~~~~~h~~~~v~~ 69 (615)
T 1pgu_A 13 QPSTQRNFTTHLSYDPTTN-----AIAYPC-GKSAF--------------VRCLDDGDSK---VPPVVQFTGHGSSVVTT 69 (615)
T ss_dssp CCCCCTTCCCCCEEETTTT-----EEEEEE-TTEEE--------------EEECCSSCCS---SCSEEEECTTTTSCEEE
T ss_pred CCCCccCceeEEEECCCCC-----EEEEec-CCeEE--------------EEECCCCCCc---cccceEEecCCCceEEE
Confidence 3446888999999999998 999998 78898 9998866111 0123458899999 999
Q ss_pred EEEcc--CCCEEEEEc-CCceEEEEeccCcc-ccccceecccccccCCCeEEEEECCCCCEEEEEeCC----CcEEEEEc
Q psy15549 87 VRFSP--NGELLASGD-DVGKEIWYLTERES-GIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE----STIIVWKQ 158 (621)
Q Consensus 87 l~~sp--dg~~las~~-d~~v~iw~~~~~~~-~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d----g~i~vwd~ 158 (621)
++|+| ++++|++++ |+.|++|++..+.. ..........+..|...|.+++|+|++++|++++.+ +.|++||
T Consensus 70 ~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d- 148 (615)
T 1pgu_A 70 VKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD- 148 (615)
T ss_dssp EEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-
T ss_pred EEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-
Confidence 99999 999999998 88899999964310 000115566777899999999999999999999987 6888888
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEeccCCc--
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST-HLISGSVDNTAIMWDVHKGKNLGILTEHKK-- 235 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-- 235 (621)
.++. ...+.+|...|.+++|+|+++ +|++++.|+.|++||+.+++.+..+..|..
T Consensus 149 -~~~~---------------------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~ 206 (615)
T 1pgu_A 149 -SGNS---------------------LGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQG 206 (615)
T ss_dssp -TCCE---------------------EEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTT
T ss_pred -CCCc---------------------ceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCC
Confidence 3332 366778999999999999997 899999999999999999999999999999
Q ss_pred -ceEEEEEcCC-CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 236 -FVQGVAWDPK-NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 236 -~v~~l~~sp~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
.|.+++|+|+ +++|++++.||.|++||+.+++.+..+... ...+...|.+++|+ ++.+
T Consensus 207 ~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-------------------~~~~~~~v~~~~~~-~~~~ 266 (615)
T 1pgu_A 207 SFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDD-------------------QEPVQGGIFALSWL-DSQK 266 (615)
T ss_dssp CCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBT-------------------TBCCCSCEEEEEES-SSSE
T ss_pred ceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccc-------------------ccccCCceEEEEEc-CCCE
Confidence 9999999999 999999999999999999998887766210 00234557888888 8888
Q ss_pred EEeccccccCCCCCCcceeeeeeeeeccc--------------------------------------CCCceecCCcccc
Q psy15549 314 LIAPSGCLENSDSTRKPISVTHVFTRACL--------------------------------------NKPAVCLPSLQYY 355 (621)
Q Consensus 314 l~~~s~~~~~~d~~i~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~ 355 (621)
|++++ .|+.+++|++......... ......+.+|...
T Consensus 267 l~~~~-----~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 341 (615)
T 1pgu_A 267 FATVG-----ADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKG 341 (615)
T ss_dssp EEEEE-----TTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSC
T ss_pred EEEEc-----CCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCC
Confidence 88887 7788888875421111000 0111223334444
Q ss_pred eeeeeccce------------------------------------eeecCCCCCCCCcc---------------------
Q psy15549 356 SVAVKCCPV------------------------------------LFELKPSDDKPLFK--------------------- 378 (621)
Q Consensus 356 ~~~~~~~~~------------------------------------~~~~~~~~~~~~~~--------------------- 378 (621)
+.++.| |. +.....++...++.
T Consensus 342 v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~ 420 (615)
T 1pgu_A 342 ITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFT 420 (615)
T ss_dssp EEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEE
T ss_pred EEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCE
Confidence 444443 21 00000000000000
Q ss_pred ---------------------------------CCCcEEEEEEc-CCcEEEEeCCCCceeEEEecccccceEEEEEcCCC
Q psy15549 379 ---------------------------------LPYRIVIAVAT-ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDG 424 (621)
Q Consensus 379 ---------------------------------~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg 424 (621)
..+.++++++. |+.|++||+.+++.......+|...|++++|+|+|
T Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 500 (615)
T 1pgu_A 421 AVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE 500 (615)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTS
T ss_pred EEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCC
Confidence 00567778888 88999999888765422334689999999999999
Q ss_pred CeEEEEeCCCcEEEEEecCCcCCcccCC-CCCcccccCCCC----------CCCCcccCCCcccHHHhcccC
Q psy15549 425 KVLIASSTDGYCSIISFGDNEIGIPYVP-PSGEESKENDPT----------KGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 425 ~~l~s~s~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~s~~~~~~~~~w~~~~ 485 (621)
++|++++.||.|++|++.+++....+.. |...+..+.++| ++..+++++.|+.+++|++..
T Consensus 501 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 572 (615)
T 1pgu_A 501 TYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR 572 (615)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSC
T ss_pred CEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCC
Confidence 9999999999999999999999888888 999999999999 999999999999999999765
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-42 Score=339.99 Aligned_cols=292 Identities=16% Similarity=0.230 Sum_probs=256.3
Q ss_pred eccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC
Q psy15549 73 FASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES 151 (621)
Q Consensus 73 ~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg 151 (621)
....+.+|.+.|.+++|+|++++|++|+ |+.|++|+...+ .....+..|...|.+++|+|++++|++|+.|+
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~-------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~ 119 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT-------NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDN 119 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC-------CEEEEEECSSSCEEEEEECTTSSEEEEEETTC
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-------CcceEeecCCccEEEEEECCCCCEEEEEeCCC
Confidence 3456899999999999999999999998 889999998876 55667788999999999999999999999999
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 231 (621)
.|++|++.+..... .....+.+|...|.++.|++++ .|++++.|+.|++||+.+++.+..+.
T Consensus 120 ~v~iw~~~~~~~~~-----------------~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~ 181 (340)
T 1got_B 120 ICSIYNLKTREGNV-----------------RVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFT 181 (340)
T ss_dssp EEEEEETTTCSBSC-----------------EEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred eEEEEECccCCCcc-----------------eeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEc
Confidence 99999998764321 1235678999999999999887 48899999999999999999999999
Q ss_pred cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC
Q psy15549 232 EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 311 (621)
+|...|.+++|+|++++|++|+.|+.|++||++++..+..+.. +...|.+++|+|++
T Consensus 182 ~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~-----------------------h~~~v~~v~~~p~~ 238 (340)
T 1got_B 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-----------------------HESDINAICFFPNG 238 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC-----------------------CSSCEEEEEECTTS
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC-----------------------CcCCEEEEEEcCCC
Confidence 9999999999999999999999999999999999887766642 34457889999988
Q ss_pred CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
++|++++ .|+
T Consensus 239 ~~l~s~s----------------------------------------------------------------------~d~ 248 (340)
T 1got_B 239 NAFATGS----------------------------------------------------------------------DDA 248 (340)
T ss_dssp SEEEEEE----------------------------------------------------------------------TTS
T ss_pred CEEEEEc----------------------------------------------------------------------CCC
Confidence 7776654 788
Q ss_pred cEEEEeCCCCceeEEEec-ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcc
Q psy15549 392 NILLYDTQHASPFAFIAN-IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVR 470 (621)
Q Consensus 392 ~i~iwd~~~~~~~~~~~~-~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (621)
.|++||+.+++.+..+.. .+...|++++|+|+|++|++|+.||.|++||+.+++....+.+|...+..+.+++++..++
T Consensus 249 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~ 328 (340)
T 1got_B 249 TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA 328 (340)
T ss_dssp CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred cEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEE
Confidence 899999988877766532 2335799999999999999999999999999999999899999999999999999999999
Q ss_pred cCCCcccHHHhc
Q psy15549 471 SEDKPRSAEQAK 482 (621)
Q Consensus 471 s~~~~~~~~~w~ 482 (621)
+++.|+.|++|+
T Consensus 329 s~s~D~~i~iWd 340 (340)
T 1got_B 329 TGSWDSFLKIWN 340 (340)
T ss_dssp EEETTSCEEEEC
T ss_pred EEcCCccEEecC
Confidence 999999999995
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=400.67 Aligned_cols=434 Identities=17% Similarity=0.157 Sum_probs=326.6
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCcccc------------------------------ccce
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRL------------------------------KTGK 57 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~------------------------------~~~~ 57 (621)
....|.+.|.+++|+|+++ +||+|+.||.|++||+.+.... ..++
T Consensus 652 ~~~~h~~~v~~~~~s~~~~-----~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~ 726 (1249)
T 3sfz_A 652 DIKAHEDEVLCCAFSSDDS-----YIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLK 726 (1249)
T ss_dssp EECCCSSCEEEEEECTTSS-----EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEE
T ss_pred EeccCCCCEEEEEEecCCC-----EEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEE
Confidence 3446899999999999998 9999999999999998654321 4678
Q ss_pred eEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCcccccc------------------
Q psy15549 58 IWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIAN------------------ 118 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~------------------ 118 (621)
+||+.++... ..+.+|.+.|.+++|+|++++|++++ |+.|++|++..+......
T Consensus 727 vwd~~~~~~~-------~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1249)
T 3sfz_A 727 LWDLNQKECR-------NTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEV 799 (1249)
T ss_dssp EEETTSSSEE-------EEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCC
T ss_pred EEECCCcchh-------heecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccc
Confidence 8988876543 34789999999999999999999988 888999998765210000
Q ss_pred -----------------------------ceec-ccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 119 -----------------------------VEFA-SDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 119 -----------------------------~~~~-~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
.... ....+|...|.+++|+|++.++++++.||.|++||+.++..+..+.
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 879 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR 879 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC
Confidence 0000 1112788899999999999999999999999999998876543322
Q ss_pred CCCccc----------------ccccccceeeee------------------------------------------eecC
Q psy15549 169 SSNLDE----------------ENVNKEHWIVTK------------------------------------------ILRG 190 (621)
Q Consensus 169 ~~~~~~----------------~~~~~~~~~~~~------------------------------------------~~~~ 190 (621)
...... .......|.... ....
T Consensus 880 ~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1249)
T 3sfz_A 880 GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYL 959 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEE
T ss_pred CCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEc
Confidence 111000 000111222100 0001
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeee
Q psy15549 191 HLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVIS 270 (621)
Q Consensus 191 ~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~ 270 (621)
+...+.+++|+|+++++++|+.+|.|++||+.+++....+.+|...|.+++|+|++++|++++.||.|++||+.+++...
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~ 1039 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF 1039 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEEC
T ss_pred ccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEE
Confidence 23346666777777777777777777777777777777888899999999999999999999999999999999887654
Q ss_pred ecccCCCCCCCcc---------ccccccccccc---------cCCcccceeeeeecCCCCeEEeccccccCCCCCCccee
Q psy15549 271 RACRSKLPVDSSH---------ELFDKVVPLFH---------DDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPIS 332 (621)
Q Consensus 271 ~~~~~~~~~~~~~---------~~~~~~~~~~~---------~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~ 332 (621)
.. .+...+.... ...+..+.+|. ...+...|.+++|+|+++++++++ .|+.+++|+
T Consensus 1040 ~~-~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s-----~d~~v~iwd 1113 (1249)
T 3sfz_A 1040 LQ-AHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTS-----ADKTAKIWS 1113 (1249)
T ss_dssp CB-CCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEEC-----CSSCCCEEC
T ss_pred Ee-cCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEc-----CCCcEEEEE
Confidence 32 2222211100 00122222222 223567789999999999999999 899999999
Q ss_pred eeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEE-----
Q psy15549 333 VTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFI----- 407 (621)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~----- 407 (621)
+.. ......+.+|...+.++.|+| ++.++++++.||.|++||+.+++.+..+
T Consensus 1114 ~~~-------~~~~~~l~~h~~~v~~~~~s~----------------dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~ 1170 (1249)
T 3sfz_A 1114 FDL-------LSPLHELKGHNGCVRCSAFSL----------------DGILLATGDDNGEIRIWNVSDGQLLHSCAPISV 1170 (1249)
T ss_dssp SSS-------SSCSBCCCCCSSCEEEEEECS----------------SSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-
T ss_pred CCC-------cceeeeeccCCCcEEEEEECC----------------CCCEEEEEeCCCEEEEEECCCCceEEEeccccc
Confidence 763 234556678888899999888 7789999999999999999998876654
Q ss_pred ---ecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhccc
Q psy15549 408 ---ANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 408 ---~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
..+|...|++++|+|||++|++++ |.|++||+.+++....+..+...+..+.+++++..+++++.+|.+++|++.
T Consensus 1171 ~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1171 EEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp ------CCSCCCEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEECCC
T ss_pred cccccccCceEEEEEECCCCCEEEECC--CeEEEEECCCCceeeeeeccCCcccEEEECCCCCEEEEecCCcEEEEEeec
Confidence 235889999999999999999985 899999999999999999999899999999999999999999999999853
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-42 Score=334.21 Aligned_cols=291 Identities=16% Similarity=0.202 Sum_probs=242.9
Q ss_pred eeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC
Q psy15549 72 EFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE 150 (621)
Q Consensus 72 ~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d 150 (621)
++..++.+|.+.|.+++|+|++++|++++ |+.|++|++..+ ..+..+..|...|.+++|+|++++|++|+.|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d 76 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ-------VEVRSIQVTETPVRAGKFIARKNWIIVGSDD 76 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-------EEEEEEECCSSCEEEEEEEGGGTEEEEEETT
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-------ceeEEeeccCCcEEEEEEeCCCCEEEEECCC
Confidence 34556899999999999999999999988 889999999876 6677788999999999999999999999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC-cEEEE
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG-KNLGI 229 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~-~~~~~ 229 (621)
++|++||+.+++.+ ..+.+|...|++++|+|++++|++|+.|+.|++||++++ .....
T Consensus 77 ~~i~vwd~~~~~~~---------------------~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~ 135 (304)
T 2ynn_A 77 FRIRVFNYNTGEKV---------------------VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT 135 (304)
T ss_dssp SEEEEEETTTCCEE---------------------EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEE
T ss_pred CEEEEEECCCCcEE---------------------EEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhh
Confidence 99999999988753 667899999999999999999999999999999999887 45567
Q ss_pred eccCCcceEEEEEcC-CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeec
Q psy15549 230 LTEHKKFVQGVAWDP-KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 308 (621)
+.+|...|.+++|+| ++.+|++|+.|+.|++||++++.....+.. .+...+..+.|+
T Consensus 136 ~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~----------------------~~~~~v~~~~~~ 193 (304)
T 2ynn_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT----------------------GQERGVNYVDYY 193 (304)
T ss_dssp ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEEC----------------------CCTTCEEEEEEC
T ss_pred hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceecc----------------------CCcCcEEEEEEE
Confidence 889999999999999 678999999999999999977654332211 111223344444
Q ss_pred CCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE
Q psy15549 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA 388 (621)
Q Consensus 309 pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (621)
|.. ++.++++++
T Consensus 194 ~~~--------------------------------------------------------------------~~~~l~s~s 205 (304)
T 2ynn_A 194 PLP--------------------------------------------------------------------DKPYMITAS 205 (304)
T ss_dssp CST--------------------------------------------------------------------TCCEEEEEE
T ss_pred EcC--------------------------------------------------------------------CCCEEEEEc
Confidence 311 234667777
Q ss_pred cCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCC-
Q psy15549 389 TENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGE- 467 (621)
Q Consensus 389 ~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 467 (621)
.|+.|++||+.+++++..+ .+|...|.+++|+|++++|++|+.||+|++||+.++++...+..+...+..+.++|++.
T Consensus 206 ~D~~i~iWd~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 206 DDLTIKIWDYQTKSCVATL-EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRK 284 (304)
T ss_dssp TTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGG
T ss_pred CCCeEEEEeCCCCccceee-CCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCc
Confidence 9999999999999998888 46999999999999999999999999999999999999999998888888888888775
Q ss_pred -CcccCCCcccHHHhc
Q psy15549 468 -PVRSEDKPRSAEQAK 482 (621)
Q Consensus 468 -~~~s~~~~~~~~~w~ 482 (621)
.++++..++ +.+|.
T Consensus 285 ~~~asg~~~g-~~~~~ 299 (304)
T 2ynn_A 285 NYIASGFDNG-FTVLS 299 (304)
T ss_dssp GCEEEEETTE-EEEEE
T ss_pred eEEEEecCCc-eEEEE
Confidence 345544443 44443
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=339.94 Aligned_cols=300 Identities=15% Similarity=0.152 Sum_probs=240.0
Q ss_pred ccccCcEEEEEEccCCCEEEEEcCCceEEEEeccCcc----ccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcE
Q psy15549 78 SRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERES----GIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTI 153 (621)
Q Consensus 78 ~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~----~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i 153 (621)
..|...|.+++|+|||++|++++++.+++|+...... .............|...|.+++|+|++ .|++|+.||+|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred ccccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 4567789999999999999999998888887432100 000001122233466789999999985 78899999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH 233 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 233 (621)
+|||+.+++.+..+ ...+.+|...|++++|+|++++|++|+.|+.|++||+.+++++..+.+|
T Consensus 106 ~lWd~~~~~~~~~~-----------------~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 168 (344)
T 4gqb_B 106 ELWELDENETLIVS-----------------KFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAH 168 (344)
T ss_dssp EEEEECTTSSCEEE-----------------EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEEeccCCCceeEe-----------------eccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCc
Confidence 99999988764221 2345689999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEcCCC-CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC
Q psy15549 234 KKFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312 (621)
Q Consensus 234 ~~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 312 (621)
...|.+++|+|++ .+|++++.|++|++||+++++....+... .+...+.+++|+|++.
T Consensus 169 ~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~---------------------~~~~~~~~~~~~p~~~ 227 (344)
T 4gqb_B 169 AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS---------------------APGYLPTSLAWHPQQS 227 (344)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------------------------CCCEEEEEECSSCT
T ss_pred CCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc---------------------eeeccceeeeecCCCC
Confidence 9999999999988 47899999999999999998876665311 1223456777777543
Q ss_pred eEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCc
Q psy15549 313 LLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENN 392 (621)
Q Consensus 313 ~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 392 (621)
.++++++.|+.
T Consensus 228 ---------------------------------------------------------------------~~l~sg~~dg~ 238 (344)
T 4gqb_B 228 ---------------------------------------------------------------------EVFVFGDENGT 238 (344)
T ss_dssp ---------------------------------------------------------------------TEEEEEETTSE
T ss_pred ---------------------------------------------------------------------cceEEeccCCc
Confidence 23444568899
Q ss_pred EEEEeCCCCceeEEEecccccceEEEEEcCCC-CeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCC-cc
Q psy15549 393 ILLYDTQHASPFAFIANIHYTKLTDITWSSDG-KVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEP-VR 470 (621)
Q Consensus 393 i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg-~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 470 (621)
|++||+.+++++..+ .+|...|++++|+|+| ++|++|+.||+|+|||+.++++. .+.+|...+..+.|+|++.. ++
T Consensus 239 v~~wd~~~~~~~~~~-~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~lla 316 (344)
T 4gqb_B 239 VSLVDTKSTSCVLSS-AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLT 316 (344)
T ss_dssp EEEEESCC--CCEEE-ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEE
T ss_pred EEEEECCCCcEEEEE-cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEE
Confidence 999999999999888 4699999999999998 57999999999999999998875 46789999999999999986 56
Q ss_pred cCCCcccHHHhcccCcc
Q psy15549 471 SEDKPRSAEQAKGEGKV 487 (621)
Q Consensus 471 s~~~~~~~~~w~~~~~~ 487 (621)
+++.|+.|++|++..+.
T Consensus 317 s~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 317 TVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEETTSCEEEEECCC--
T ss_pred EEcCCCeEEEEECCCCC
Confidence 88999999999987654
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=323.79 Aligned_cols=290 Identities=19% Similarity=0.313 Sum_probs=245.5
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
.+.+|.++|++++|+|+++ +|++|+.||.|+ +|++.++... ..+.+|...|.++
T Consensus 18 ~~~gh~~~v~~~~~s~~~~-----~l~s~~~dg~i~--------------iw~~~~~~~~-------~~~~~h~~~v~~~ 71 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGE-----WLASSSADKLIK--------------IWGAYDGKFE-------KTISGHKLGISDV 71 (312)
T ss_dssp EECCCSSCEEEEEECTTSS-----EEEEEETTSCEE--------------EEETTTCCEE-------EEECCCSSCEEEE
T ss_pred EEcccCCcEEEEEECCCCC-----EEEEeeCCCeEE--------------EEeCCCcccc-------hhhccCCCceEEE
Confidence 3457899999999999998 999999999999 9988766543 3478999999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
+|+|++++|++++ |+.|++|++..+ ..+..+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+
T Consensus 72 ~~~~~~~~l~s~~~d~~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-- 142 (312)
T 4ery_A 72 AWSSDSNLLVSASDDKTLKIWDVSSG-------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL-- 142 (312)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE--
T ss_pred EEcCCCCEEEEECCCCEEEEEECCCC-------cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE--
Confidence 9999999999988 888999999876 566778899999999999999999999999999999999887643
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCcceEEEEEcCC
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT-EHKKFVQGVAWDPK 245 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~l~~sp~ 245 (621)
..+..|...|.+++|+|++++|++++.||.|++||+++++.+..+. .+...+..++|+|+
T Consensus 143 -------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (312)
T 4ery_A 143 -------------------KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 203 (312)
T ss_dssp -------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTT
T ss_pred -------------------EEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCC
Confidence 5677899999999999999999999999999999999998887764 45678999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCC
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSD 325 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d 325 (621)
+++|++++.|+.|++||+++++.+..+..+.... ......+++
T Consensus 204 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~---------------- 246 (312)
T 4ery_A 204 GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK---------------------YCIFANFSV---------------- 246 (312)
T ss_dssp SSEEEEEETTTEEEEEETTTTEEEEEECSSCCSS---------------------SCCCEEEEC----------------
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEEecCCce---------------------EEEEEEEEe----------------
Confidence 9999999999999999999988776654322110 000011111
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA 405 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 405 (621)
.++.++++++.||.|++||+.+++.+.
T Consensus 247 -----------------------------------------------------~~~~~l~sg~~dg~i~vwd~~~~~~~~ 273 (312)
T 4ery_A 247 -----------------------------------------------------TGGKWIVSGSEDNLVYIWNLQTKEIVQ 273 (312)
T ss_dssp -----------------------------------------------------SSSCEEEECCTTSCEEEEETTTCCEEE
T ss_pred -----------------------------------------------------CCCcEEEEECCCCEEEEEECCCchhhh
Confidence 023456667789999999999999888
Q ss_pred EEecccccceEEEEEcCCCCeEEEEe--CCCcEEEEEec
Q psy15549 406 FIANIHYTKLTDITWSSDGKVLIASS--TDGYCSIISFG 442 (621)
Q Consensus 406 ~~~~~h~~~v~~~~~spdg~~l~s~s--~dg~i~iw~~~ 442 (621)
.+ .+|...|.+++|+|++++|++++ .|++|++|+.+
T Consensus 274 ~~-~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 274 KL-QGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EE-CCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred hh-hccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 88 46999999999999999999997 69999999965
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-42 Score=342.49 Aligned_cols=327 Identities=13% Similarity=0.123 Sum_probs=234.6
Q ss_pred eEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCE
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGEL 95 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~ 95 (621)
-..+.+.++. +++.++.+.... .|++.... ..+|...|++++|||||++
T Consensus 8 ~sg~d~g~~~------~~~~~~g~~~~~--------------~w~~p~~~-----------p~~H~~~V~~v~fSpDG~~ 56 (357)
T 4g56_B 8 SSGVDLGTEN------LYFQSNGSSKGS--------------AWGRPVTA-----------PACMEVQIGAVRYRRDGAL 56 (357)
T ss_dssp ---------------------------------------------------------------CCCSEEEEEEECSSSCE
T ss_pred ccCCCCCccc------eEEecCCCcccc--------------ccCCCCCC-----------cccccCCEEEEEECCCCCE
Confidence 3456666666 445555566666 88765322 3579999999999999999
Q ss_pred EEEEcC-------CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 96 LASGDD-------VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 96 las~~d-------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
||+|++ +.+++|+...+... ........+|...|.+++|+|++. +++++.||+|+|||+.+++.....
T Consensus 57 las~s~d~~~~wd~~v~~~~~~~~~~~---~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~- 131 (357)
T 4g56_B 57 LLAASSLSSRTWGGSIWVFKDPEGAPN---ESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVN- 131 (357)
T ss_dssp EEEEECSSSSSCCEEEEEESSCC---C---GGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCC-
T ss_pred EEEEcCCCCccccCeEEEEECCCCCcc---eeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEE-
Confidence 999984 34666665544211 122334457889999999999985 556788999999999988754322
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC-
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ- 247 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~- 247 (621)
.....+|...|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.
T Consensus 132 ----------------~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 132 ----------------KFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp ----------------CEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred ----------------eeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 134568999999999999999999999999999999999999999999999999999999875
Q ss_pred EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCC
Q psy15549 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDST 327 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~ 327 (621)
+|++++.||.|++||+++++....+. ...+...+.+++|+|++..
T Consensus 196 ~~~s~~~dg~v~~wd~~~~~~~~~~~---------------------~~~~~~~v~~v~~sp~~~~-------------- 240 (357)
T 4g56_B 196 IFLSCGEDGRILLWDTRKPKPATRID---------------------FCASDTIPTSVTWHPEKDD-------------- 240 (357)
T ss_dssp CEEEEETTSCEEECCTTSSSCBCBCC---------------------CTTCCSCEEEEEECTTSTT--------------
T ss_pred eeeeeccCCceEEEECCCCceeeeee---------------------eccccccccchhhhhcccc--------------
Confidence 78899999999999999877654432 1223445678888887532
Q ss_pred CcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEE
Q psy15549 328 RKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFI 407 (621)
Q Consensus 328 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 407 (621)
++++++.|+.|++||+.+++.+..+
T Consensus 241 -------------------------------------------------------~la~g~~d~~i~~wd~~~~~~~~~~ 265 (357)
T 4g56_B 241 -------------------------------------------------------TFACGDETGNVSLVNIKNPDSAQTS 265 (357)
T ss_dssp -------------------------------------------------------EEEEEESSSCEEEEESSCGGGCEEE
T ss_pred -------------------------------------------------------eEEEeecccceeEEECCCCcEeEEE
Confidence 2334457899999999999988887
Q ss_pred ecccccceEEEEEcCCC-CeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCC-CCCCcccCCCcccHHHhcccC
Q psy15549 408 ANIHYTKLTDITWSSDG-KVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPT-KGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 408 ~~~h~~~v~~~~~spdg-~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~w~~~~ 485 (621)
.+|...|++++|+|++ ++||+|+.||+|+|||+.++++.+.+ .|...+..+.|+| ++..+++++.|+.|++|++..
T Consensus 266 -~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 266 -AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp -CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred -eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 4699999999999997 57999999999999999999887665 6888899999998 788999999999999999754
Q ss_pred c
Q psy15549 486 K 486 (621)
Q Consensus 486 ~ 486 (621)
+
T Consensus 344 ~ 344 (357)
T 4g56_B 344 E 344 (357)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=335.85 Aligned_cols=304 Identities=21% Similarity=0.332 Sum_probs=230.3
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccc---------ee--eccccc
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIAN---------VE--FASDLS 78 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~---------~~--~~~~~~ 78 (621)
..|.+.|+|++|+|||+ +||+|+ ++.++ ||++.++...... .. ......
T Consensus 61 ~~h~~~V~~v~fspdg~-----~la~g~-~~~v~--------------i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~ 120 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGE-----YLATGC-NKTTQ--------------VYRVSDGSLVARLSDDSAANKDPENLNTSSSP 120 (393)
T ss_dssp EECSSCCCEEEECTTSS-----EEEEEC-BSCEE--------------EEETTTCCEEEEECC-----------------
T ss_pred cCCCCEEEEEEECCCCC-----EEEEEc-CCcEE--------------EEEecCCCEEEEecCccccccccccccccccC
Confidence 35899999999999998 999987 67899 5555544322110 00 000011
Q ss_pred cccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Q psy15549 79 RHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWK 157 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd 157 (621)
.+...|.+++|+|+|++|++|+ |+.|++|++..+ .....+.+|...|.+++|+|++++|++++.|++|++||
T Consensus 121 ~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 121 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENR-------KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 193 (393)
T ss_dssp CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCC-------cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEE
Confidence 2334599999999999999988 889999999876 66777889999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEe------
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKNLGIL------ 230 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~~~~~------ 230 (621)
+.+++.. ..+ .+...+.+++|+| ++++|++|+.|+.|++||++++..+..+
T Consensus 194 ~~~~~~~---------------------~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~ 251 (393)
T 1erj_A 194 LRTGQCS---------------------LTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENES 251 (393)
T ss_dssp TTTTEEE---------------------EEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-----
T ss_pred CCCCeeE---------------------EEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccC
Confidence 9887642 222 3567799999999 8999999999999999999999887776
Q ss_pred -ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC
Q psy15549 231 -TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309 (621)
Q Consensus 231 -~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 309 (621)
.+|...|.+++|+|++++|++++.|+.|++||+++.......... .
T Consensus 252 ~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~---------------------------------~ 298 (393)
T 1erj_A 252 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP---------------------------------N 298 (393)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------------------------------------------
T ss_pred CCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC---------------------------------C
Confidence 578899999999999999999999999999999875432211000 0
Q ss_pred CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc
Q psy15549 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT 389 (621)
Q Consensus 310 dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (621)
.+.... .+.+|...+.++.++| ++.+|++++.
T Consensus 299 ~~~~~~--------------------------------~~~~h~~~v~~~~~~~----------------~~~~l~sgs~ 330 (393)
T 1erj_A 299 SGTCEV--------------------------------TYIGHKDFVLSVATTQ----------------NDEYILSGSK 330 (393)
T ss_dssp --CEEE--------------------------------EEECCSSCEEEEEECG----------------GGCEEEEEET
T ss_pred CCcceE--------------------------------EEecccCcEEEEEECC----------------CCCEEEEEeC
Confidence 000000 1112333344444443 4456667778
Q ss_pred CCcEEEEeCCCCceeEEEecccccceEEEEEcC------CCCeEEEEeCCCcEEEEEecCC
Q psy15549 390 ENNILLYDTQHASPFAFIANIHYTKLTDITWSS------DGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 390 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp------dg~~l~s~s~dg~i~iw~~~~~ 444 (621)
|+.|++||..+++++..+ .+|...|.+++|++ ++++|++|+.||+|+||++...
T Consensus 331 D~~v~iwd~~~~~~~~~l-~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 331 DRGVLFWDKKSGNPLLML-QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp TSEEEEEETTTCCEEEEE-ECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCeEEEEECCCCeEEEEE-CCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 999999999999988887 46999999999886 6889999999999999998753
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=346.50 Aligned_cols=343 Identities=16% Similarity=0.267 Sum_probs=273.9
Q ss_pred CCCCeEEEeccccccCCcceEEEEe----------cCCceEEeeeccCccccccceeEEeccccccccceeecccccccc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTG----------GADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ 81 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg----------~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~ 81 (621)
+...|.+++|+|+++ .+|++| +.|+.|+ ||++.++..... .. ...|.
T Consensus 11 ~~~~v~~~~~sp~g~----~~l~~g~~~g~~~~~~~~d~~v~--------------iw~~~~~~~~~~----~~-~~~~~ 67 (416)
T 2pm9_A 11 EFSRTATFAWSHDKI----PLLVSGTVSGTVDANFSTDSSLE--------------LWSLLAADSEKP----IA-SLQVD 67 (416)
T ss_dssp EEEESCBCCBCSSSS----CEEEEBCBSSCCCSSCCCCCCCE--------------EEESSSGGGCSC----SC-CCCCS
T ss_pred hhhhcceEeeCCCCC----CEEEEEecCcccccccCCCCeEE--------------EEEccCCCCCcE----EE-EEecC
Confidence 345799999999985 489999 8899999 998887653211 11 23588
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcc
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWKQK 159 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd~~ 159 (621)
..|.+++|+|++++|++++ |+.|++|++...... ......+.+|...|.+++|+|+ +++|++++.|+.|++||+.
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNA---INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp SCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSC---CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred CceEEEEECCCCCeEEEEccCCeEEEeeccccccc---ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 9999999999999999987 889999999873211 1356677889999999999998 8999999999999999998
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEeccC-----
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHKGKNLGILTEH----- 233 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----- 233 (621)
+......... ......+..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+..+
T Consensus 145 ~~~~~~~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 212 (416)
T 2pm9_A 145 KCTESPSNYT------------PLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSG 212 (416)
T ss_dssp TTSSCTTTCC------------CBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSC
T ss_pred CCcccccccc------------ccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccc
Confidence 8762100000 0001234678999999999998 789999999999999999999999888776
Q ss_pred -CcceEEEEEcCCC-CEEEEEeCCC---cEEEEEccCce-eeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 234 -KKFVQGVAWDPKN-QYVATLSSDR---SLRTYSIQSKK-VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 234 -~~~v~~l~~sp~~-~~l~s~~~dg---~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
...|.+++|+|++ .+|++++.|+ .|++||++++. .+..+. ..+...|.+++|
T Consensus 213 ~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~----------------------~~~~~~v~~~~~ 270 (416)
T 2pm9_A 213 IKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLN----------------------QGHQKGILSLDW 270 (416)
T ss_dssp CCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCC----------------------SCCSSCEEEEEE
T ss_pred cCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEee----------------------cCccCceeEEEe
Confidence 7889999999997 6899999998 99999998863 333221 034556788999
Q ss_pred cC-CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEE
Q psy15549 308 SP-DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIA 386 (621)
Q Consensus 308 sp-dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (621)
+| ++++|++++
T Consensus 271 s~~~~~~l~s~~-------------------------------------------------------------------- 282 (416)
T 2pm9_A 271 CHQDEHLLLSSG-------------------------------------------------------------------- 282 (416)
T ss_dssp CSSCSSCEEEEE--------------------------------------------------------------------
T ss_pred CCCCCCeEEEEe--------------------------------------------------------------------
Confidence 98 676666544
Q ss_pred EEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCC-CeEEEEeCCCcEEEEEecCCcCCcccCC-------------
Q psy15549 387 VATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDG-KVLIASSTDGYCSIISFGDNEIGIPYVP------------- 452 (621)
Q Consensus 387 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg-~~l~s~s~dg~i~iw~~~~~~~~~~~~~------------- 452 (621)
.|+.|++||+.+++.+..+. +|...|++++|+|++ .+|++++.||.|++|++.++........
T Consensus 283 --~dg~v~~wd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (416)
T 2pm9_A 283 --RDNTVLLWNPESAEQLSQFP-ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFW 359 (416)
T ss_dssp --SSSEEEEECSSSCCEEEEEE-CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC---------------
T ss_pred --CCCCEEEeeCCCCccceeec-CCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccc
Confidence 78999999999999888884 699999999999999 8999999999999999997764433211
Q ss_pred ----------------------CCCcccccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 453 ----------------------PSGEESKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 453 ----------------------~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
+...+..+.|+++|+.+++++.|+.|++|++..
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 360 NNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp -------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred ccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 344556778999999999999999999998653
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=375.36 Aligned_cols=414 Identities=11% Similarity=0.067 Sum_probs=293.2
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
...|..+|.+|+|+| ++ +|++++.|+.|+ |||+.+++... .+. |.+.|++++
T Consensus 54 ~~~~~~~V~~l~fsp-g~-----~L~S~s~D~~v~--------------lWd~~~~~~~~-------~~~-~~~~V~~v~ 105 (902)
T 2oaj_A 54 KLEDRSAIKEMRFVK-GI-----YLVVINAKDTVY--------------VLSLYSQKVLT-------TVF-VPGKITSID 105 (902)
T ss_dssp ECSSCCCEEEEEEET-TT-----EEEEEETTCEEE--------------EEETTTCSEEE-------EEE-CSSCEEEEE
T ss_pred EcCCCCCEEEEEEcC-CC-----EEEEEECcCeEE--------------EEECCCCcEEE-------EEc-CCCCEEEEE
Confidence 345788999999999 87 999999999999 88887765432 233 668999999
Q ss_pred EccCCCEEEEEc-CCceEEEEeccCcccccccee-----c-ccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEEccC
Q psy15549 89 FSPNGELLASGD-DVGKEIWYLTERESGIANVEF-----A-SDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 89 ~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~-----~-~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd~~~ 160 (621)
|+|++++|++|+ |+.|++|++..+... .+.. . ..+.+|.+.|++++|+|+ +..|++|+.||.| +||+.+
T Consensus 106 ~sp~g~~l~sgs~dg~V~lwd~~~~~~~--~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~ 182 (902)
T 2oaj_A 106 TDASLDWMLIGLQNGSMIVYDIDRDQLS--SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE 182 (902)
T ss_dssp CCTTCSEEEEEETTSCEEEEETTTTEEE--EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCccc--cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC
Confidence 999999999998 889999999876311 0000 0 345789999999999995 5789999999999 999998
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE--ec---c---
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI--LT---E--- 232 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~--~~---~--- 232 (621)
++.+..+.............. ......|...|++++|+|+|++|++|+.||.|++||+++++++.. +. .
T Consensus 183 ~~~~~~~~~~~~~g~~~~~~~---~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~ 259 (902)
T 2oaj_A 183 NEIKQSFIYELPPFAPGGDFS---EKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVP 259 (902)
T ss_dssp TEEEEEECCCBCTTCCCSTTC---CCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSC
T ss_pred CceEEEEecccCCcCCCcccc---cccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCC
Confidence 765432211000000000000 011234568899999999999999999999999999999988754 21 1
Q ss_pred ----------CCcceEEEEEc----CCC-CEEEEEeCC-----CcEEEEEcc------------------Cceeeeeccc
Q psy15549 233 ----------HKKFVQGVAWD----PKN-QYVATLSSD-----RSLRTYSIQ------------------SKKVISRACR 274 (621)
Q Consensus 233 ----------~~~~v~~l~~s----p~~-~~l~s~~~d-----g~i~iwd~~------------------~~~~~~~~~~ 274 (621)
|...|.+++|+ |++ ..|++|+.| ..+.+|++. +.+....+..
T Consensus 260 ~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (902)
T 2oaj_A 260 QPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPL 339 (902)
T ss_dssp CTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECC
T ss_pred CCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEec
Confidence 34579999995 443 457777665 378888842 1111111100
Q ss_pred -CC------------CCC----CCc-c---cccccccccc----------------------------------------
Q psy15549 275 -SK------------LPV----DSS-H---ELFDKVVPLF---------------------------------------- 293 (621)
Q Consensus 275 -~~------------~~~----~~~-~---~~~~~~~~~~---------------------------------------- 293 (621)
+. .+. ... . ...+..+.+|
T Consensus 340 ~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~ 419 (902)
T 2oaj_A 340 PTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLG 419 (902)
T ss_dssp SSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHH
T ss_pred CCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHH
Confidence 00 000 000 0 0000001111
Q ss_pred ----------ccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCC-cee--c-----CCcccc
Q psy15549 294 ----------HDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKP-AVC--L-----PSLQYY 355 (621)
Q Consensus 294 ----------~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~-~~~--~-----~~~~~~ 355 (621)
....+...+.+++|+|++++|++++ .|+++++|++.... ...+ ... + .+|...
T Consensus 420 ~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs-----~DgtVrlWd~~~g~----~~~~~~~~~~l~~~~~~~h~~~ 490 (902)
T 2oaj_A 420 ALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGH-----SNGSVRIYDASHGD----IQDNASFEVNLSRTLNKAKELA 490 (902)
T ss_dssp HHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEE-----TTSEEEEEESSCCT----TTTTBCEEEEHHHHTTCSSSCC
T ss_pred HHhcccCCCCcccCCcCCCCcccccccCcEEEEec-----CCCcEEEEECCCcc----ccCCceEEeechhhcCCCCCCc
Confidence 1122333456678899999999999 99999999986531 1110 000 1 267778
Q ss_pred eeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc---------------------------------
Q psy15549 356 SVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS--------------------------------- 402 (621)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--------------------------------- 402 (621)
+.+++|+| ++++|++++.||+|+|||+.+++
T Consensus 491 V~svafsp----------------dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (902)
T 2oaj_A 491 VDKISFAA----------------ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVR 554 (902)
T ss_dssp EEEEEEET----------------TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECG
T ss_pred eeEEEecC----------------CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccccccc
Confidence 99999988 88999999999999999998763
Q ss_pred ------------eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCC-----cccC-CCCCcccccCCC-
Q psy15549 403 ------------PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIG-----IPYV-PPSGEESKENDP- 463 (621)
Q Consensus 403 ------------~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~-----~~~~-~~~~~~~~~~~~- 463 (621)
++..+ .+|.+.|++++||||| +||+|+.||+|+|||+.++.++ ..+. +|...+..+.|+
T Consensus 555 ~~~~~~~~~g~~~~~~l-~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~ 632 (902)
T 2oaj_A 555 DRAPTGVRQGFMPSTAV-HANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVI 632 (902)
T ss_dssp GGCCTTCSEEEEEEEEE-CCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEE
T ss_pred ccCCCCCCCccceeEEE-EcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEE
Confidence 23444 4699999999999999 9999999999999999877553 3454 788889999999
Q ss_pred ----CCC---CCcccCCCcccHHHhcc
Q psy15549 464 ----TKG---EPVRSEDKPRSAEQAKG 483 (621)
Q Consensus 464 ----~~~---~~~~s~~~~~~~~~w~~ 483 (621)
+|| ..+++++.|+++++|++
T Consensus 633 ~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 633 MEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EecCCCCCcceEEEEEecCCcEEEEEE
Confidence 886 79999999999999997
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=323.77 Aligned_cols=295 Identities=22% Similarity=0.292 Sum_probs=245.1
Q ss_pred eeecCCCCeEEEecccc-ccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 8 ISWHNRDPVLSVDIQLK-QEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd-~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
.+.+|.++|++|+|+|+ ++ +||||+.|+.|+ |||+...+... ..+...+.+|...|.+
T Consensus 33 tL~GH~~~V~~v~~sp~~~~-----~l~S~s~D~~i~--------------vWd~~~~~~~~--~~~~~~l~~h~~~V~~ 91 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPD-----MILSASRDKTII--------------MWKLTRDETNY--GIPQRALRGHSHFVSD 91 (340)
T ss_dssp EECCCSSCEEEEEECTTCTT-----EEEEEETTSCEE--------------EEEECCSSSCS--EEEEEEECCCSSCEEE
T ss_pred EECCccCCEEEEEEeCCCCC-----EEEEEcCCCeEE--------------EEECCCCCccc--ceeeEEEeCCCCCEEE
Confidence 35679999999999998 56 999999999999 88887654322 2234568899999999
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
++|+|+|++|++++ |+.|++|+.... ........+...+..+.+++++.+|++++.|+.+++||+......
T Consensus 92 ~~~s~dg~~l~s~~~d~~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~- 163 (340)
T 4aow_A 92 VVISSDGQFALSGSWDGTLRLWDLTTG-------TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY- 163 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTT-------EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE-
T ss_pred EEECCCCCEEEEEcccccceEEeeccc-------ceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE-
Confidence 99999999999988 888999998876 555566678888999999999999999999999999998765432
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC--CEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEc
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS--THLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD 243 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~--~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~s 243 (621)
.....+|...+.+++|++++ .++++++.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 164 -------------------~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s 224 (340)
T 4aow_A 164 -------------------TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS 224 (340)
T ss_dssp -------------------EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred -------------------EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEEC
Confidence 24456899999999999865 578899999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccC
Q psy15549 244 PKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLEN 323 (621)
Q Consensus 244 p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~ 323 (621)
|++++|++|+.||.|++||+++.+.+..+.. ...+.++.|+|++.++
T Consensus 225 ~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~------------------------~~~v~~~~~~~~~~~~--------- 271 (340)
T 4aow_A 225 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDG------------------------GDIINALCFSPNRYWL--------- 271 (340)
T ss_dssp TTSSEEEEEETTCEEEEEETTTTEEEEEEEC------------------------SSCEEEEEECSSSSEE---------
T ss_pred CCCCEEEEEeCCCeEEEEEeccCceeeeecC------------------------CceEEeeecCCCCcee---------
Confidence 9999999999999999999999887766532 2245677777765443
Q ss_pred CCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCce
Q psy15549 324 SDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP 403 (621)
Q Consensus 324 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 403 (621)
+++.|+.|++||+.++..
T Consensus 272 --------------------------------------------------------------~~~~d~~i~iwd~~~~~~ 289 (340)
T 4aow_A 272 --------------------------------------------------------------CAATGPSIKIWDLEGKII 289 (340)
T ss_dssp --------------------------------------------------------------EEEETTEEEEEETTTTEE
T ss_pred --------------------------------------------------------------eccCCCEEEEEECCCCeE
Confidence 334567788888877665
Q ss_pred eEEEe--------cccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 404 FAFIA--------NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 404 ~~~~~--------~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
+..+. .+|...|++++|+|||++|++|+.||.|+||++.+|.
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 290 VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 54442 3688899999999999999999999999999999875
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=331.67 Aligned_cols=295 Identities=15% Similarity=0.173 Sum_probs=254.4
Q ss_pred eccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC
Q psy15549 73 FASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES 151 (621)
Q Consensus 73 ~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg 151 (621)
....+.+|.+.|++++|+|++++|++|+ |+.|++|+.... .....+..|...|.+++|+|+|.+|++|+.|+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~-------~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~ 128 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTT-------NKEHAVTMPCTWVMACAYAPSGCAIACGGLDN 128 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-------CEEEEEECSSSCCCEEEECTTSSEEEEESTTS
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCC-------CcceEEecCCCCEEEEEECCCCCEEEEeeCCC
Confidence 3456899999999999999999999998 889999998766 45566777889999999999999999999999
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 231 (621)
.+++|++......... .....+.+|...|.+++|+|++..|++++.|++|++||+++++.+..+.
T Consensus 129 ~i~v~~~~~~~~~~~~---------------~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~ 193 (354)
T 2pbi_B 129 KCSVYPLTFDKNENMA---------------AKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH 193 (354)
T ss_dssp EEEEEECCCCTTCCSG---------------GGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEEEecccccccc---------------ccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc
Confidence 9999998765321100 0124566899999999999999999999999999999999999999999
Q ss_pred cCCcceEEEEEcC--CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC
Q psy15549 232 EHKKFVQGVAWDP--KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309 (621)
Q Consensus 232 ~~~~~v~~l~~sp--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 309 (621)
+|...|.+++|+| ++++|++|+.||.|++||+++++.+..+.. +...|.+++|+|
T Consensus 194 ~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~-----------------------h~~~v~~v~~~p 250 (354)
T 2pbi_B 194 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET-----------------------HESDVNSVRYYP 250 (354)
T ss_dssp CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECC-----------------------CSSCEEEEEECT
T ss_pred CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-----------------------CCCCeEEEEEeC
Confidence 9999999999987 578999999999999999999887776642 345678899999
Q ss_pred CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc
Q psy15549 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT 389 (621)
Q Consensus 310 dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (621)
++.+|++++ .
T Consensus 251 ~~~~l~s~s----------------------------------------------------------------------~ 260 (354)
T 2pbi_B 251 SGDAFASGS----------------------------------------------------------------------D 260 (354)
T ss_dssp TSSEEEEEE----------------------------------------------------------------------T
T ss_pred CCCEEEEEe----------------------------------------------------------------------C
Confidence 887776655 6
Q ss_pred CCcEEEEeCCCCceeEEEec-ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCC
Q psy15549 390 ENNILLYDTQHASPFAFIAN-IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEP 468 (621)
Q Consensus 390 dg~i~iwd~~~~~~~~~~~~-~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (621)
|+.|++||+..++.+..+.. .+...+++++|+|+|++|++|+.||.|++||+.+++....+..|...+..+.++|++..
T Consensus 261 D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~ 340 (354)
T 2pbi_B 261 DATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTA 340 (354)
T ss_dssp TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSC
T ss_pred CCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCE
Confidence 78888888888776655532 23357899999999999999999999999999999988899999999999999999999
Q ss_pred cccCCCcccHHHhc
Q psy15549 469 VRSEDKPRSAEQAK 482 (621)
Q Consensus 469 ~~s~~~~~~~~~w~ 482 (621)
+++++.|+.+++|+
T Consensus 341 l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 341 FCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEETTSEEEEEC
T ss_pred EEEEcCCCCEEecC
Confidence 99999999999994
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=328.81 Aligned_cols=314 Identities=21% Similarity=0.269 Sum_probs=247.9
Q ss_pred eeccccccccC-cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC
Q psy15549 72 EFASDLSRHQK-AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD 149 (621)
Q Consensus 72 ~~~~~~~~h~~-~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~ 149 (621)
++...+.+|.. .|.+++|+|+|++||+|+ |+.|+||++..+... .......+|...|.+++|+|++++|++|+.
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~----~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI----CKSVLSEGHQRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE----EEEEECSSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce----eeeeeccccCCcEEEEEECCCCCEEEEEEC
Confidence 44566889988 999999999999999988 889999999875210 112234689999999999999999999999
Q ss_pred CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc---E
Q psy15549 150 ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK---N 226 (621)
Q Consensus 150 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~---~ 226 (621)
|++|++|++..... .....+.+|...|.+++|+|++++|++|+.|+.|++||+.++. +
T Consensus 82 D~~v~iw~~~~~~~-------------------~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~ 142 (345)
T 3fm0_A 82 DATTCIWKKNQDDF-------------------ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC 142 (345)
T ss_dssp TSCEEEEEECCC-E-------------------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEE
T ss_pred CCcEEEEEccCCCe-------------------EEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEE
Confidence 99999999876642 1236678999999999999999999999999999999998763 4
Q ss_pred EEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceee--eecccCCCCCCCccccccccccccccCCcccceee
Q psy15549 227 LGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVI--SRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304 (621)
Q Consensus 227 ~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 304 (621)
+..+..|...|.+++|+|++++|++++.|+.|++||+.++... ..+ ..+...|.+
T Consensus 143 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~-----------------------~~h~~~v~~ 199 (345)
T 3fm0_A 143 VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATL-----------------------EGHESTVWS 199 (345)
T ss_dssp EEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEE-----------------------CCCSSCEEE
T ss_pred EEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEe-----------------------cCCCCceEE
Confidence 5677889999999999999999999999999999999876532 233 245567899
Q ss_pred eeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEE
Q psy15549 305 LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIV 384 (621)
Q Consensus 305 ~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 384 (621)
++|+|+|++|++++ .|+.+++|+..... ....+.
T Consensus 200 l~~sp~g~~l~s~s-----~D~~v~iW~~~~~~--------------~~~~~~--------------------------- 233 (345)
T 3fm0_A 200 LAFDPSGQRLASCS-----DDRTVRIWRQYLPG--------------NEQGVA--------------------------- 233 (345)
T ss_dssp EEECTTSSEEEEEE-----TTSCEEEEEEECTT--------------CTTCCC---------------------------
T ss_pred EEECCCCCEEEEEe-----CCCeEEEeccccCC--------------CCccce---------------------------
Confidence 99999999999998 89999999854210 000000
Q ss_pred EEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCC---------cccCCCCC
Q psy15549 385 IAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIG---------IPYVPPSG 455 (621)
Q Consensus 385 ~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~---------~~~~~~~~ 455 (621)
..+.+.. .+.+..+...|...|.+++|+|++..|++++.|+.|++|+...+... .....|..
T Consensus 234 -~~~~~~~--------~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~ 304 (345)
T 3fm0_A 234 -CSGSDPS--------WKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQ 304 (345)
T ss_dssp -CC---CE--------EEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSS
T ss_pred -eeccCCc--------cceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccC
Confidence 0000000 11233343458889999999999999999999999999999865321 12356888
Q ss_pred cccccCCCCCCC-CcccCCCcccHHHhcccCc
Q psy15549 456 EESKENDPTKGE-PVRSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 456 ~~~~~~~~~~~~-~~~s~~~~~~~~~w~~~~~ 486 (621)
.+..+.|+|++. .+++++.|+.|++|+...+
T Consensus 305 ~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 305 DVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp CEEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred cEeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 899999999985 7899999999999997654
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=369.81 Aligned_cols=372 Identities=18% Similarity=0.218 Sum_probs=297.4
Q ss_pred CccccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccc
Q psy15549 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRH 80 (621)
Q Consensus 1 m~~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h 80 (621)
|+++......+|.++|.+++|+|+++ +||+|+.||.|+ |||+.++... ..+.+|
T Consensus 1 m~l~~~~~~~~h~~~v~~i~~sp~~~-----~la~~~~~g~v~--------------iwd~~~~~~~-------~~~~~~ 54 (814)
T 3mkq_A 1 MKLDIKKTFSNRSDRVKGIDFHPTEP-----WVLTTLYSGRVE--------------IWNYETQVEV-------RSIQVT 54 (814)
T ss_dssp -CCCCEEEEEEECSCEEEEEECSSSS-----EEEEEETTSEEE--------------EEETTTTEEE-------EEEECC
T ss_pred CCcccceeeecCCCceEEEEECCCCC-----EEEEEeCCCEEE--------------EEECCCCceE-------EEEecC
Confidence 78888888999999999999999998 999999999999 9988776543 347889
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEcc
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
.+.|.+++|+|++++|++++ ++.|++|++..+ .....+.+|...|++++|+|++++|++++.||.|++||+.
T Consensus 55 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 127 (814)
T 3mkq_A 55 ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG-------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (814)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGG
T ss_pred CCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC-------cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECC
Confidence 99999999999999999988 888999999877 5667788899999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEeccCC-cce
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKNLGILTEHK-KFV 237 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~v 237 (621)
++.. ....+.+|...|.+++|+| ++..|++++.||.|++||+.++.....+..+. ..+
T Consensus 128 ~~~~--------------------~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v 187 (814)
T 3mkq_A 128 NNWA--------------------LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV 187 (814)
T ss_dssp GTSE--------------------EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCC
T ss_pred CCce--------------------EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCE
Confidence 7632 2366778999999999999 88999999999999999999888777776554 889
Q ss_pred EEEEEcC--CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 238 QGVAWDP--KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 238 ~~l~~sp--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
.+++|+| ++.+|++++.||.|++||+.+++.+..+.. +...|.+++|+|++.+++
T Consensus 188 ~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-----------------------~~~~v~~~~~~~~~~~l~ 244 (814)
T 3mkq_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG-----------------------HMSNVSFAVFHPTLPIII 244 (814)
T ss_dssp CEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC-----------------------CSSCEEEEEECSSSSEEE
T ss_pred EEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC-----------------------CCCCEEEEEEcCCCCEEE
Confidence 9999999 999999999999999999999888776643 344579999999999999
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcE-EEEEEcCCcEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRI-VIAVATENNIL 394 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~dg~i~ 394 (621)
+++ .|+.+++|+.... .....+..+...+.++.|+| ++.. +++++.++.+.
T Consensus 245 ~~~-----~dg~v~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~----------------~~~~~~~~~~~~~~~~ 296 (814)
T 3mkq_A 245 SGS-----EDGTLKIWNSSTY-------KVEKTLNVGLERSWCIATHP----------------TGRKNYIASGFDNGFT 296 (814)
T ss_dssp EEE-----TTSCEEEEETTTC-------SEEEEECCSSSSEEEEEECT----------------TCGGGEEEEEETTEEE
T ss_pred EEe-----CCCeEEEEECCCC-------cEEEEeecCCCcEEEEEEcc----------------CCCceEEEEEeCCCEE
Confidence 999 8999999987532 23334555666777777776 3332 46666677777
Q ss_pred EEeCCCCceeEEEe------------------------------------------cccccceEEEEEcCCCCeEEEEeC
Q psy15549 395 LYDTQHASPFAFIA------------------------------------------NIHYTKLTDITWSSDGKVLIASST 432 (621)
Q Consensus 395 iwd~~~~~~~~~~~------------------------------------------~~h~~~v~~~~~spdg~~l~s~s~ 432 (621)
+|++........+. ..+...+.+++|+|+|++|++++
T Consensus 297 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~- 375 (814)
T 3mkq_A 297 VLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG- 375 (814)
T ss_dssp EEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-
T ss_pred EEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-
Confidence 78765432221110 12444678999999999999888
Q ss_pred CCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhc
Q psy15549 433 DGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 433 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~ 482 (621)
||.+.+|++..... .+.+.+..+.|+|++..++.++.++.+++|+
T Consensus 376 ~~~~~i~~~~~~~~-----~~~~~i~~~~~spdg~~la~~~~~g~v~l~~ 420 (814)
T 3mkq_A 376 DGEYVIYTALAWRN-----KAFGKCQDFVWGPDSNSYALIDETGQIKYYK 420 (814)
T ss_dssp TTEEEEEETTTTEE-----EEEEECSEEEECTTSSCEEEECTTCCEEEEE
T ss_pred CCEEEEEECccccc-----cCCCceEEEEEeCCCCeEEEEeCCCcEEEEE
Confidence 89999999653221 1223455566666666666666666666664
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=343.33 Aligned_cols=333 Identities=13% Similarity=0.181 Sum_probs=272.1
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEe----ccccccc---cceeecccc-----
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYL----TERESGI---ANVEFASDL----- 77 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~----~~~~~~~---~~~~~~~~~----- 77 (621)
..|.++|++++|+|+++ .+||+|+.||.|+ +|++ .++.... ....+...+
T Consensus 42 ~~~~~~v~~~~~s~~~~----~~l~~~~~dg~i~--------------iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDE----SILAYGEKNSVAR--------------LARIVETDQEGKKYWKLTIIAELRHPFALSAS 103 (425)
T ss_dssp EEECSCCSEEEECSSCT----TEEEEEETBTEEE--------------EEEEEEC------CEEEEEEEEEECCCCCC--
T ss_pred eeccCceEEEEECCCCC----cEEEEecCCceEE--------------EEEEecccCCcccccccccccccccccccccc
Confidence 34668999999999985 4899999999999 6666 4433100 001111112
Q ss_pred -ccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy15549 78 -SRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIV 155 (621)
Q Consensus 78 -~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~v 155 (621)
.+|.+.|.+++|+|++++|++++ ++.|++|+. .+ .....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 104 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 175 (425)
T 1r5m_A 104 SGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNK-TG-------ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTIL 175 (425)
T ss_dssp ----CBCEEEEEECTTSSEEEEEETTSCEEEEET-TS-------CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred ccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-CC-------CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEE
Confidence 23688999999999999999988 888999993 32 556677889999999999999999999999999999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCC---------------eEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLED---------------VYDISWSPTSTHLISGSVDNTAIMWD 220 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------v~~i~~spd~~~l~s~~~dg~i~vwd 220 (621)
||+.+++.+ ..+..+... +.+++|+|++ .+++++.+|.|++||
T Consensus 176 wd~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d 233 (425)
T 1r5m_A 176 WNVISGTVM---------------------QHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQ 233 (425)
T ss_dssp EETTTTEEE---------------------EEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEE
T ss_pred EECCCCcEE---------------------EEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEE
Confidence 999887654 233334333 8999999875 688899999999999
Q ss_pred CCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCccc
Q psy15549 221 VHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKS 300 (621)
Q Consensus 221 ~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (621)
+.+++.+..+..|...|.+++|+|++++|++++.||.|++||+++++.+..+. .+..
T Consensus 234 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----------------------~~~~ 290 (425)
T 1r5m_A 234 ITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFY-----------------------GHSQ 290 (425)
T ss_dssp TTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEEC-----------------------CCSS
T ss_pred cCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEec-----------------------CCCc
Confidence 99999999999999999999999999999999999999999999877665553 2344
Q ss_pred ceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCC
Q psy15549 301 FFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLP 380 (621)
Q Consensus 301 ~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (621)
.|.+++|+|++ ++++
T Consensus 291 ~i~~~~~~~~~-~l~~---------------------------------------------------------------- 305 (425)
T 1r5m_A 291 SIVSASWVGDD-KVIS---------------------------------------------------------------- 305 (425)
T ss_dssp CEEEEEEETTT-EEEE----------------------------------------------------------------
T ss_pred cEEEEEECCCC-EEEE----------------------------------------------------------------
Confidence 56888888877 5544
Q ss_pred CcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc---------------
Q psy15549 381 YRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE--------------- 445 (621)
Q Consensus 381 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~--------------- 445 (621)
++.|+.|++||+.+++.+..+. .|...|.+++|+|+|++|++++.||.|++|++.++.
T Consensus 306 ------~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 378 (425)
T 1r5m_A 306 ------CSMDGSVRLWSLKQNTLLALSI-VDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILN 378 (425)
T ss_dssp ------EETTSEEEEEETTTTEEEEEEE-CTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------
T ss_pred ------EeCCCcEEEEECCCCcEeEecc-cCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccC
Confidence 4478999999999999888774 588999999999999999999999999999999888
Q ss_pred -----CCcccCCCCC--cccccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 446 -----IGIPYVPPSG--EESKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 446 -----~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
+...+..+.. .+..+.+++++..+++++.++.+++|++++
T Consensus 379 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 379 PLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred cccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence 7788888866 899999999999999999999999998764
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=339.49 Aligned_cols=313 Identities=13% Similarity=0.163 Sum_probs=242.2
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
....|...|+||+|+|... .+||+|+.||.|+ |||+..+.... ...+.+|.+.|++|
T Consensus 114 ~~~~~~~~V~~l~~~P~~~----~~lasGs~dg~i~--------------lWd~~~~~~~~-----~~~~~gH~~~V~~l 170 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHP----STVAVGSKGGDIM--------------LWNFGIKDKPT-----FIKGIGAGGSITGL 170 (435)
T ss_dssp EEEECSSCEEEEEECSSCT----TCEEEEETTSCEE--------------EECSSCCSCCE-----EECCCSSSCCCCEE
T ss_pred cCCCCCCCEEEEEEeCCCC----CEEEEEeCCCEEE--------------EEECCCCCcee-----EEEccCCCCCEEEE
Confidence 4456888999999999543 3899999999999 88887664322 23467899999999
Q ss_pred EEcc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 88 RFSP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 88 ~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
+|+| ++.+|++|+ |+.|++||+.... .........+...+.+++|+|++++|++|+.||.|++||+.... +
T Consensus 171 ~f~p~~~~~l~s~s~D~~v~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~- 243 (435)
T 4e54_B 171 KFNPLNTNQFYASSMEGTTRLQDFKGNI-----LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-L- 243 (435)
T ss_dssp EECSSCTTEEEEECSSSCEEEEETTSCE-----EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-C-
T ss_pred EEeCCCCCEEEEEeCCCEEEEeeccCCc-----eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-e-
Confidence 9998 789999998 8999999987641 12222333455578899999999999999999999999986542 2
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEE---eccCCcceEEEE
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST-HLISGSVDNTAIMWDVHKGKNLGI---LTEHKKFVQGVA 241 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~-~l~s~~~dg~i~vwd~~~~~~~~~---~~~~~~~v~~l~ 241 (621)
..+.+|...|++++|+|++. +|++|+.|+.|++||+++.+.... ..+|...|.+++
T Consensus 244 --------------------~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 303 (435)
T 4e54_B 244 --------------------WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAAC 303 (435)
T ss_dssp --------------------CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECC
T ss_pred --------------------EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccccccee
Confidence 44578999999999999876 788999999999999988764433 357899999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccc
Q psy15549 242 WDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCL 321 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~ 321 (621)
|+|+|++|++++.||.|++||+.++.....+..+..... ....+..+.|+|++.+++++..
T Consensus 304 ~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~-- 364 (435)
T 4e54_B 304 FSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHF-----------------QHLTPIKAAWHPRYNLIVVGRY-- 364 (435)
T ss_dssp BCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCC-----------------SSSCCCBCEECSSSSCEEEECC--
T ss_pred ECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccc-----------------ccceeEEEEEcCCCCEEEEEEc--
Confidence 999999999999999999999999887766644332110 0112345788999988887652
Q ss_pred cCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC
Q psy15549 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA 401 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 401 (621)
.++.+.++ ++..++.|++||..++
T Consensus 365 --~d~~~~~~------------------------------------------------------~~~~~~~i~iwd~~~g 388 (435)
T 4e54_B 365 --PDPNFKSC------------------------------------------------------TPYELRTIDVFDGNSG 388 (435)
T ss_dssp --CCTTSCCS------------------------------------------------------STTCCCCEEEECSSSC
T ss_pred --CCCCeEEE------------------------------------------------------EecCCCEEEEEECCCC
Confidence 22222111 1224568999999999
Q ss_pred ceeEEEecccccceEEE-EEcCCCCeEEEEeCCCcEEEEEecCCcC
Q psy15549 402 SPFAFIANIHYTKLTDI-TWSSDGKVLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 402 ~~~~~~~~~h~~~v~~~-~~spdg~~l~s~s~dg~i~iw~~~~~~~ 446 (621)
+.+..+..+|...|.++ +|+|+|++|++|+ |+.|+||++.+++.
T Consensus 389 ~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 389 KMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred cEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 99998877898999988 6999999999876 88999999998765
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-39 Score=323.42 Aligned_cols=320 Identities=16% Similarity=0.249 Sum_probs=261.4
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
+..+.+|.++|++++|+|+++ +|++|+.||.|+ +||+.++... ..+.+|...|.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~-----~l~~~~~dg~i~--------------vwd~~~~~~~-------~~~~~h~~~v~ 78 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGD-----LLFSCSKDSSAS--------------VWYSLNGERL-------GTLDGHTGTIW 78 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSC-----EEEEEESSSCEE--------------EEETTTCCEE-------EEECCCSSCEE
T ss_pred cEEEEEeeceEEEEEEcCCCC-----EEEEEeCCCEEE--------------EEeCCCchhh-------hhhhhcCCcEE
Confidence 345677999999999999998 999999999999 9988776543 34789999999
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC-----CcEEEEEcc
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE-----STIIVWKQK 159 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d-----g~i~vwd~~ 159 (621)
+++|+|++++|++++ |+.|++|++..+ .....+. |...|.+++|+|++++|++++.+ +.|++||+.
T Consensus 79 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 79 SIDVDCFTKYCVTGSADYSIKLWDVSNG-------QCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIE 150 (369)
T ss_dssp EEEECTTSSEEEEEETTTEEEEEETTTC-------CEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCC-------cEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence 999999999999988 888999999876 4444444 88899999999999999999998 999999998
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCC--CeEEEEECCCCCEEEEEeCCCeEEEEECCC-CcEEEEeccCCcc
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLE--DVYDISWSPTSTHLISGSVDNTAIMWDVHK-GKNLGILTEHKKF 236 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~i~~spd~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~ 236 (621)
.......+... .......+..|.. .+.+++|+|++++|++++.||.|++||+.+ +..+..+..|...
T Consensus 151 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 220 (369)
T 3zwl_B 151 RDSATHELTKV----------SEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS 220 (369)
T ss_dssp ECTTTCCEEEE----------CSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC
T ss_pred CCccceeeccc----------ccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc
Confidence 87654332100 0011234455665 899999999999999999999999999998 7888889999999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
|.+++|+|++++|++++.|+.|++||+++++.+..+. ....+.+++|+|+++++++
T Consensus 221 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~l~~ 276 (369)
T 3zwl_B 221 ISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE------------------------TDCPLNTAVITPLKEFIIL 276 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE------------------------CSSCEEEEEECSSSSEEEE
T ss_pred eeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec------------------------CCCCceeEEecCCCceEEE
Confidence 9999999999999999999999999999988777663 2345789999999999999
Q ss_pred ccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEE
Q psy15549 317 PSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLY 396 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw 396 (621)
++ .++...+|... .......+++|
T Consensus 277 ~~-----~~~~~~~~~~~---------------------------------------------------~~~~~~~i~~~ 300 (369)
T 3zwl_B 277 GG-----GQEAKDVTTTS---------------------------------------------------ANEGKFEARFY 300 (369)
T ss_dssp EE-----CCC----------------------------------------------------------------CEEEEE
T ss_pred ee-----cCCCceEEEEe---------------------------------------------------cCCCcceeEEE
Confidence 88 44444433321 01123479999
Q ss_pred eCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCccc
Q psy15549 397 DTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY 450 (621)
Q Consensus 397 d~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~ 450 (621)
|..+++.+..+ .+|...|++++|+|+|++|++++.||.|++|++..+.+...+
T Consensus 301 d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 301 HKIFEEEIGRV-QGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKY 353 (369)
T ss_dssp ETTTCCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCC
T ss_pred ecCCCcchhhe-ecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccchhHH
Confidence 99999999888 469999999999999999999999999999999987654443
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=319.50 Aligned_cols=292 Identities=25% Similarity=0.378 Sum_probs=252.7
Q ss_pred eeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC
Q psy15549 72 EFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE 150 (621)
Q Consensus 72 ~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d 150 (621)
.+...+.+|...|++++|+|++++|++++ |+.|++|+...+ .....+.+|...|.+++|+|++++|++|+.|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 86 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-------KFEKTISGHKLGISDVAWSSDSNLLVSASDD 86 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCc-------ccchhhccCCCceEEEEEcCCCCEEEEECCC
Confidence 34556889999999999999999999988 889999998876 5566788999999999999999999999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
+.|++||+.+++.+ ..+.+|...|.+++|+|++++|++|+.|+.|++||+++++.+..+
T Consensus 87 ~~i~vwd~~~~~~~---------------------~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 145 (312)
T 4ery_A 87 KTLKIWDVSSGKCL---------------------KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 145 (312)
T ss_dssp SEEEEEETTTCCEE---------------------EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCcEE---------------------EEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe
Confidence 99999999988743 667889999999999999999999999999999999999999999
Q ss_pred ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 231 TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 231 ~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
..|...|.+++|+|++++|++++.||.|++||+++++.+..+.. .....+..++|+|+
T Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~ 203 (312)
T 4ery_A 146 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID----------------------DDNPPVSFVKFSPN 203 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC----------------------SSCCCEEEEEECTT
T ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEec----------------------cCCCceEEEEECCC
Confidence 99999999999999999999999999999999998877665421 12334677888888
Q ss_pred CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 311 g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
+++|++++ .|
T Consensus 204 ~~~l~~~~----------------------------------------------------------------------~d 213 (312)
T 4ery_A 204 GKYILAAT----------------------------------------------------------------------LD 213 (312)
T ss_dssp SSEEEEEE----------------------------------------------------------------------TT
T ss_pred CCEEEEEc----------------------------------------------------------------------CC
Confidence 77766544 78
Q ss_pred CcEEEEeCCCCceeEEEecccccce---EEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCC
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTKL---TDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGE 467 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~v---~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (621)
+.|++||+.+++.+..+. +|...+ ......+++.+|++|+.||.|++||+.++++...+.+|...+..+.++|++.
T Consensus 214 ~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 292 (312)
T 4ery_A 214 NTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 292 (312)
T ss_dssp TEEEEEETTTTEEEEEEC-SSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSS
T ss_pred CeEEEEECCCCcEEEEEE-ecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCC
Confidence 899999999998887774 465443 2333446789999999999999999999999999999999999999999999
Q ss_pred CcccCC--CcccHHHhccc
Q psy15549 468 PVRSED--KPRSAEQAKGE 484 (621)
Q Consensus 468 ~~~s~~--~~~~~~~w~~~ 484 (621)
.+++++ .|+.+++|+..
T Consensus 293 ~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 293 IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEEECTTTCCEEEEECC
T ss_pred ceEEEEccCCccEEEecCC
Confidence 888775 69999999753
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=352.82 Aligned_cols=296 Identities=24% Similarity=0.355 Sum_probs=241.1
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
..+..|.+.|++|+|+|++. .+|++|+.|+.|+ ||++....... ......+.+|...|.+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~----~~l~s~s~D~~i~--------------~W~~~~~~~~~--~~~~~~~~~h~~~v~~ 435 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNA----DIIVSASRDKSII--------------LWKLTKDDKAY--GVAQRRLTGHSHFVED 435 (694)
T ss_dssp EEEECCSSCEEEEECCTTCC----SEEEEEETTSEEE--------------EEECCCSTTCS--CEEEEEEECCSSCEEE
T ss_pred hhcccCCceeEEEEecCCCC----CEEEEEeCCCcEE--------------EEEccCCCccc--ccccceecCCCCcEEE
Confidence 35668999999999999763 3999999999999 88887543221 1123457899999999
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
++|+|+|++|++|+ |+.|+||++..+ .....+.+|...|.+++|+|++++|++|+.|++|++||+.......
T Consensus 436 v~~s~~g~~l~sgs~Dg~v~vwd~~~~-------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~ 508 (694)
T 3dm0_A 436 VVLSSDGQFALSGSWDGELRLWDLAAG-------VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYT 508 (694)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTT-------EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCC-------cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCccee
Confidence 99999999999998 889999999876 6677788999999999999999999999999999999975442210
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC--CEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEc
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS--THLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD 243 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~--~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~s 243 (621)
......+|...|.+++|+|++ ..|++++.|+.|++||+++++....+.+|.+.|.+++|+
T Consensus 509 ------------------~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~s 570 (694)
T 3dm0_A 509 ------------------ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS 570 (694)
T ss_dssp ------------------ECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred ------------------eccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEe
Confidence 112235789999999999987 689999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccC
Q psy15549 244 PKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLEN 323 (621)
Q Consensus 244 p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~ 323 (621)
|++++|++++.||.|++||+++++.+..+. ....|.+++|+|++.+++++.
T Consensus 571 pdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~------------------------~~~~v~~~~~sp~~~~l~~~~----- 621 (694)
T 3dm0_A 571 PDGSLCASGGKDGVVLLWDLAEGKKLYSLE------------------------ANSVIHALCFSPNRYWLCAAT----- 621 (694)
T ss_dssp TTSSEEEEEETTSBCEEEETTTTEEEECCB------------------------CSSCEEEEEECSSSSEEEEEE-----
T ss_pred CCCCEEEEEeCCCeEEEEECCCCceEEEec------------------------CCCcEEEEEEcCCCcEEEEEc-----
Confidence 999999999999999999999998776553 123578899999987776543
Q ss_pred CCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCce
Q psy15549 324 SDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP 403 (621)
Q Consensus 324 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 403 (621)
++.|++||+.++..
T Consensus 622 ------------------------------------------------------------------~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 622 ------------------------------------------------------------------EHGIKIWDLESKSI 635 (694)
T ss_dssp ------------------------------------------------------------------TTEEEEEETTTTEE
T ss_pred ------------------------------------------------------------------CCCEEEEECCCCCC
Confidence 33455555555554
Q ss_pred eEEEec------------------ccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 404 FAFIAN------------------IHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 404 ~~~~~~------------------~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
+..+.. .+...+++++|+|||++|++|+.||.|++|++.
T Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 636 VEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred hhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 443321 122247899999999999999999999999985
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=336.28 Aligned_cols=300 Identities=20% Similarity=0.315 Sum_probs=251.2
Q ss_pred eccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC
Q psy15549 73 FASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES 151 (621)
Q Consensus 73 ~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg 151 (621)
....+.+|.+.|++++|+|++++|++|+ |+.|+||+...+ .....+..|...|.+++|+|++++|++|+.|+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~-------~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~ 130 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS-------QKTHAIKLHCPWVMECAFAPNGQSVACGGLDS 130 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT-------EEEEEEECCCTTCCCCEECTTSSEEEECCSSS
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------ccceEEecCCCCEEEEEECCCCCEEEEeeCCC
Confidence 3456899999999999999999999998 889999999876 66777889999999999999999999999999
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
.|++|++.+...... .......+.+|...|.++.|+|+ +..|++|+.|+.|++||+.+++.+..+
T Consensus 131 ~v~iw~~~~~~~~~~--------------~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 196 (380)
T 3iz6_a 131 ACSIFNLSSQADRDG--------------NMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIF 196 (380)
T ss_dssp CCEEEECCCCSSCCC--------------SSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEE
T ss_pred cEEEEECCCCccccC--------------CccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEe
Confidence 999999976432110 00012557799999999999996 457999999999999999999998877
Q ss_pred -----ccCCcceEEEEEcC-CCCEEEEEeCCCcEEEEEccC-ceeeeecccCCCCCCCccccccccccccccCCccccee
Q psy15549 231 -----TEHKKFVQGVAWDP-KNQYVATLSSDRSLRTYSIQS-KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303 (621)
Q Consensus 231 -----~~~~~~v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 303 (621)
.+|...|.+++|++ ++++|++|+.|+.|++||++. +..+..+. .|...|.
T Consensus 197 ~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-----------------------~h~~~v~ 253 (380)
T 3iz6_a 197 GSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-----------------------GHEGDIN 253 (380)
T ss_dssp CCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-----------------------CCSSCCC
T ss_pred ecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-----------------------CcCCCeE
Confidence 57889999999987 889999999999999999974 34444443 3455678
Q ss_pred eeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcE
Q psy15549 304 RLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRI 383 (621)
Q Consensus 304 ~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (621)
+++|+|++++|++++
T Consensus 254 ~v~~~p~~~~l~s~s----------------------------------------------------------------- 268 (380)
T 3iz6_a 254 SVKFFPDGQRFGTGS----------------------------------------------------------------- 268 (380)
T ss_dssp EEEECTTSSEEEEEC-----------------------------------------------------------------
T ss_pred EEEEecCCCeEEEEc-----------------------------------------------------------------
Confidence 999999988877766
Q ss_pred EEEEEcCCcEEEEeCCCCceeEEEecc------cccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCccc----CCC
Q psy15549 384 VIAVATENNILLYDTQHASPFAFIANI------HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY----VPP 453 (621)
Q Consensus 384 l~~~~~dg~i~iwd~~~~~~~~~~~~~------h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~----~~~ 453 (621)
.|+.|++||+.++..+..+... +...|++++|+|+|++|++|+.||.|++||+.+++....+ ..|
T Consensus 269 -----~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h 343 (380)
T 3iz6_a 269 -----DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSH 343 (380)
T ss_dssp -----SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSC
T ss_pred -----CCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCC
Confidence 6788888888888777665321 2235899999999999999999999999999988776555 568
Q ss_pred CCcccccCCCCCCCCcccCCCcccHHHhcccCc
Q psy15549 454 SGEESKENDPTKGEPVRSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 454 ~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~~ 486 (621)
...+..+.++|+|..+++++.|+.+++|++.+.
T Consensus 344 ~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 344 EGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp CCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 888999999999999999999999999997654
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=317.97 Aligned_cols=293 Identities=18% Similarity=0.259 Sum_probs=246.6
Q ss_pred eeccccccccCcEEEEEEccCC-CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC
Q psy15549 72 EFASDLSRHQKAVNVVRFSPNG-ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD 149 (621)
Q Consensus 72 ~~~~~~~~h~~~V~~l~~spdg-~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~ 149 (621)
.+..++.+|.+.|++++|+|++ ++|++|+ |+.|++|++...... ....+..+.+|...|.+++|+|++++|++|+.
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~--~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK--FGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE--EEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc--ccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 3455789999999999999965 8999988 889999998754211 11345678899999999999999999999999
Q ss_pred CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Q psy15549 150 ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI 229 (621)
Q Consensus 150 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~ 229 (621)
|++|++||+.+++.+ ..+.+|...|.+++|+|++.+|++|+.|+.|++||++ +.++..
T Consensus 86 D~~v~~wd~~~~~~~---------------------~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~ 143 (319)
T 3frx_A 86 DKTLRLWDVATGETY---------------------QRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLAT 143 (319)
T ss_dssp TSEEEEEETTTTEEE---------------------EEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEE
T ss_pred CCEEEEEECCCCCee---------------------EEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEE
Confidence 999999999988743 6678999999999999999999999999999999995 667788
Q ss_pred eccCCcceEEEEEcCC------CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCccccee
Q psy15549 230 LTEHKKFVQGVAWDPK------NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp~------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 303 (621)
+.+|...|.+++|+|. +.+|++++.|+.|++||+++.+....+. .+...|.
T Consensus 144 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-----------------------~h~~~v~ 200 (319)
T 3frx_A 144 LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-----------------------GHNSNIN 200 (319)
T ss_dssp ECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC-----------------------CCCSCEE
T ss_pred EeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec-----------------------CCCCcEE
Confidence 8899999999999985 4589999999999999999887766554 3345678
Q ss_pred eeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcE
Q psy15549 304 RLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRI 383 (621)
Q Consensus 304 ~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (621)
+++|+|+|++|++++
T Consensus 201 ~~~~sp~g~~l~s~~----------------------------------------------------------------- 215 (319)
T 3frx_A 201 TLTASPDGTLIASAG----------------------------------------------------------------- 215 (319)
T ss_dssp EEEECTTSSEEEEEE-----------------------------------------------------------------
T ss_pred EEEEcCCCCEEEEEe-----------------------------------------------------------------
Confidence 899999888777654
Q ss_pred EEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCC--------CCC
Q psy15549 384 VIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP--------PSG 455 (621)
Q Consensus 384 l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~--------~~~ 455 (621)
.|+.|++||+.+++.+..+. +...|.+++|+|++.+|++++.+ .+++|++..+.+...+.. +..
T Consensus 216 -----~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (319)
T 3frx_A 216 -----KDGEIMLWNLAAKKAMYTLS--AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEP 287 (319)
T ss_dssp -----TTCEEEEEETTTTEEEEEEE--CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCC
T ss_pred -----CCCeEEEEECCCCcEEEEec--CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCc
Confidence 78999999999999888874 45689999999999999988755 599999987765544432 234
Q ss_pred cccccCCCCCCCCcccCCCcccHHHhccc
Q psy15549 456 EESKENDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 456 ~~~~~~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
.+..+.|+|+|+.+++++.|+.|++|++.
T Consensus 288 ~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 288 HAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred ceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 45678999999999999999999999864
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-40 Score=336.78 Aligned_cols=323 Identities=15% Similarity=0.159 Sum_probs=263.4
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
.+++++|+|+++ +|++|+.||.|+ +|++.+...... +..| ..+....|+++++
T Consensus 58 ~~~~~~~s~~g~-----~l~~~~~d~~v~--------------i~d~~~~~~~~~-------~~~~-~~~~~~~~~~~~~ 110 (420)
T 3vl1_A 58 AGKGNTFEKVGS-----HLYKARLDGHDF--------------LFNTIIRDGSKM-------LKRA-DYTAVDTAKLQMR 110 (420)
T ss_dssp CCTTCEEEEEET-----TEEEEEETTEEE--------------EEECCSEETTTT-------SCSC-CEEEEEEECSSSC
T ss_pred cccceeeeecCC-----eEEEEEcCCcEE--------------EEEecccceeeE-------EecC-CceEEEEEecCCC
Confidence 456899999999 999999999999 998877655332 4555 4556667899999
Q ss_pred EEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcc
Q psy15549 95 LLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLD 173 (621)
Q Consensus 95 ~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~ 173 (621)
+|++|+ ++.|++|++..+ .....+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+
T Consensus 111 ~l~~~~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~--------- 174 (420)
T 3vl1_A 111 RFILGTTEGDIKVLDSNFN-------LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP--------- 174 (420)
T ss_dssp EEEEEETTSCEEEECTTSC-------EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC---------
T ss_pred EEEEEECCCCEEEEeCCCc-------ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc---------
Confidence 999988 888999998866 556667899999999999999999999999999999999988754
Q ss_pred cccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc---CCcceE------------
Q psy15549 174 EENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE---HKKFVQ------------ 238 (621)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~---~~~~v~------------ 238 (621)
..+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+.. +...|.
T Consensus 175 ------------~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 242 (420)
T 3vl1_A 175 ------------RTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQL 242 (420)
T ss_dssp ------------EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSC
T ss_pred ------------eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCccee
Confidence 56678999999999999999999999999999999999999888864 333444
Q ss_pred ---------EEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC
Q psy15549 239 ---------GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309 (621)
Q Consensus 239 ---------~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 309 (621)
+++|+|++++|++++.||.|++||+++++.+..+.. .+...|.+++|+|
T Consensus 243 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------------------~~~~~v~~~~~~~ 300 (420)
T 3vl1_A 243 HEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS----------------------KFTCSCNSLTVDG 300 (420)
T ss_dssp GGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC----------------------TTSSCEEEEEECS
T ss_pred eecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc----------------------ccCCCceeEEEeC
Confidence 455578999999999999999999998876655421 2345678899988
Q ss_pred CCC-eEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE
Q psy15549 310 DGQ-LLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA 388 (621)
Q Consensus 310 dg~-~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (621)
++. +|++ ++
T Consensus 301 ~~~~~l~~----------------------------------------------------------------------g~ 310 (420)
T 3vl1_A 301 NNANYIYA----------------------------------------------------------------------GY 310 (420)
T ss_dssp SCTTEEEE----------------------------------------------------------------------EE
T ss_pred CCCCEEEE----------------------------------------------------------------------Ee
Confidence 877 5554 44
Q ss_pred cCCcEEEEeCCCCce-eEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc---------CCcccCCCCCccc
Q psy15549 389 TENNILLYDTQHASP-FAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE---------IGIPYVPPSGEES 458 (621)
Q Consensus 389 ~dg~i~iwd~~~~~~-~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~---------~~~~~~~~~~~~~ 458 (621)
.||.|++||+.+++. +..+...|...|.++.| +++++|++++.||.|++|++.... ....+..+...+.
T Consensus 311 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 389 (420)
T 3vl1_A 311 ENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVS 389 (420)
T ss_dssp TTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCC
T ss_pred CCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceE
Confidence 789999999998754 66665557778888855 578899999999999999998742 2233455667788
Q ss_pred ccCCCCCCC---CcccCCCcccHHHhcccC
Q psy15549 459 KENDPTKGE---PVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 459 ~~~~~~~~~---~~~s~~~~~~~~~w~~~~ 485 (621)
.+.|++++. .+...+.++.+.+|+++.
T Consensus 390 ~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 390 QFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 889999998 677778888888888754
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=323.37 Aligned_cols=327 Identities=18% Similarity=0.204 Sum_probs=254.4
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
|++...|.++|++++|+|+++ +|++|+.|+.|+ +|++..++ ++....+.+|...|.
T Consensus 1 ~~~~~~~~~~i~~~~~s~~~~-----~l~~~~~d~~v~--------------i~~~~~~~-----~~~~~~~~~h~~~v~ 56 (372)
T 1k8k_C 1 MAYHSFLVEPISCHAWNKDRT-----QIAICPNNHEVH--------------IYEKSGNK-----WVQVHELKEHNGQVT 56 (372)
T ss_dssp -CEEESCSSCCCEEEECTTSS-----EEEEECSSSEEE--------------EEEEETTE-----EEEEEEEECCSSCEE
T ss_pred CceecccCCCeEEEEECCCCC-----EEEEEeCCCEEE--------------EEeCCCCc-----EEeeeeecCCCCccc
Confidence 356667999999999999998 999999999999 99987664 123445789999999
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
+++|+|++++|++++ |+.|++|++..+. ......+..|...|.+++|+|++++|++++.|+.|++||+......
T Consensus 57 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 57 GVDWAPDSNRIVTCGTDRNAYVWTLKGRT-----WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDW 131 (372)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEEETTE-----EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTE
T ss_pred EEEEeCCCCEEEEEcCCCeEEEEECCCCe-----eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcc
Confidence 999999999999988 8889999997762 1233445678999999999999999999999999999999887631
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEEC------------------CCCcE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDV------------------HKGKN 226 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~------------------~~~~~ 226 (621)
. .......+|...|.+++|+|++++|++++.||.|++||+ ..++.
T Consensus 132 ~-----------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (372)
T 1k8k_C 132 W-----------------VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 194 (372)
T ss_dssp E-----------------EEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCE
T ss_pred e-----------------eeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhh
Confidence 1 112334678999999999999999999999999999995 46788
Q ss_pred EEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeee
Q psy15549 227 LGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLT 306 (621)
Q Consensus 227 ~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 306 (621)
+..+..|...|.+++|+|++++|++++.||.|++||+++++.+..+..+ ...|.+++
T Consensus 195 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----------------------~~~v~~~~ 251 (372)
T 1k8k_C 195 MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE-----------------------TLPLLAVT 251 (372)
T ss_dssp EEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS-----------------------SCCEEEEE
T ss_pred eEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC-----------------------CCCeEEEE
Confidence 8899899999999999999999999999999999999998887776432 34578999
Q ss_pred ecCCCCeEEeccccccCCCCCCcceeeee--ee-e-ecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCc
Q psy15549 307 FSPDGQLLIAPSGCLENSDSTRKPISVTH--VF-T-RACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYR 382 (621)
Q Consensus 307 ~spdg~~l~~~s~~~~~~d~~i~~~~~~~--~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (621)
|+|++.+++++ .|+.+++|++.. .. . ..... .+
T Consensus 252 ~~~~~~~l~~~------~d~~i~i~~~~~~~~~~~~~~~~~-------~~------------------------------ 288 (372)
T 1k8k_C 252 FITESSLVAAG------HDCFPVLFTYDSAAGKLSFGGRLD-------VP------------------------------ 288 (372)
T ss_dssp EEETTEEEEEE------TTSSCEEEEEETTTTEEEECCCCC-------CC------------------------------
T ss_pred EecCCCEEEEE------eCCeEEEEEccCcCceEEEeeccC-------cc------------------------------
Confidence 99999988765 488999999863 10 0 00000 00
Q ss_pred EEEEEEcCCcEEEE---eCCCCcee------EEEecccccceEEEEEc-CCC---CeEEEEeCCCcEEEEEecCCc
Q psy15549 383 IVIAVATENNILLY---DTQHASPF------AFIANIHYTKLTDITWS-SDG---KVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 383 ~l~~~~~dg~i~iw---d~~~~~~~------~~~~~~h~~~v~~~~~s-pdg---~~l~s~s~dg~i~iw~~~~~~ 445 (621)
..........+.+| +.. +... ..+..+|...|++++|+ ++| .+|++|+.||.|++|++.+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 289 KQSSQRGLTARERFQNLDKK-ASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp --------CHHHHHHHCCCC-C---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred ccchhhhcchhhhhhhcccc-cccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 00011122334445 322 2221 23334799999999966 677 999999999999999998754
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-39 Score=325.05 Aligned_cols=321 Identities=12% Similarity=0.112 Sum_probs=248.6
Q ss_pred ccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCc
Q psy15549 4 TIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA 83 (621)
Q Consensus 4 ~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~ 83 (621)
.....+.+|.++|++|+|+| . +|++|+.||.|+ +|++..+.... .......+.+|...
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~-----~l~s~~~dg~i~--------------iw~~~~~~~~~-~~~~~~~~~~h~~~ 64 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--S-----FTVSCSGDGYLK--------------VWDNKLLDNEN-PKDKSYSHFVHKSG 64 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--S-----EEEEEETTSEEE--------------EEESBCCTTCC-GGGGEEEEECCTTC
T ss_pred hhhhhhhhhhcCeEEEEecC--C-----eEEEEcCCCEEE--------------EEECCCccccc-CCCcceEEecCCCc
Confidence 44556678999999999999 5 999999999999 88887765211 12234457799999
Q ss_pred EEEEEEccC----C---CEEEEEc-CCceEEEEeccCccccccceeccccccc-----CCCeEEEEEC----CCCCE-EE
Q psy15549 84 VNVVRFSPN----G---ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRH-----QKAVNVVRFS----PNGEL-LA 145 (621)
Q Consensus 84 V~~l~~spd----g---~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h-----~~~V~~i~~s----p~g~~-l~ 145 (621)
|.+++|+|+ + ++|++++ |+.|++|++..+..... .....+..| ...|.+++|+ |++++ |+
T Consensus 65 v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 142 (397)
T 1sq9_A 65 LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK--VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLV 142 (397)
T ss_dssp EEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC--EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEE
T ss_pred EEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc--ccceeecccccccCCCcEEEEEEeeccCCCCceEEE
Confidence 999999999 9 9999988 88999999987632100 115556677 5899999999 99999 99
Q ss_pred EEeCCCcEEEEEccC------CCCCCCCCCCCcccccccccceeeeeee-------cCCCCCeEEEEECCCCCEEEEEeC
Q psy15549 146 SGDDESTIIVWKQKT------DQDLPEFPSSNLDEENVNKEHWIVTKIL-------RGHLEDVYDISWSPTSTHLISGSV 212 (621)
Q Consensus 146 s~s~dg~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~i~~spd~~~l~s~~~ 212 (621)
+++.||.|++||+.+ ...+... ....+ ..|...|.+++|+|++ +|++++.
T Consensus 143 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~ 205 (397)
T 1sq9_A 143 ATDVKGTTYIWKFHPFADESNSLTLNWS----------------PTLELQGTVESPMTPSQFATSVDISERG-LIATGFN 205 (397)
T ss_dssp EEETTSCEEEEEEESSSSHHHHTTTCCC----------------CEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT
T ss_pred EEeCCCcEEEEeCCccccccccceeecc----------------CcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC
Confidence 999999999999998 5543200 01133 4588999999999999 9999999
Q ss_pred CCeEEEEECCCCcEEEEecc---C---CcceEEEEEcCCCCEEEEEeCC---CcEEEEEccCceeeeecccCCCCCCCcc
Q psy15549 213 DNTAIMWDVHKGKNLGILTE---H---KKFVQGVAWDPKNQYVATLSSD---RSLRTYSIQSKKVISRACRSKLPVDSSH 283 (621)
Q Consensus 213 dg~i~vwd~~~~~~~~~~~~---~---~~~v~~l~~sp~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~ 283 (621)
||.|++||+++++.+..+.. | ...|.+++|+|++++|++++.| |.|++||+++++.+..+.....+..
T Consensus 206 dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~--- 282 (397)
T 1sq9_A 206 NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQ--- 282 (397)
T ss_dssp TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------
T ss_pred CCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccc---
Confidence 99999999999999999988 8 9999999999999999999999 9999999999887776643110000
Q ss_pred ccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccc
Q psy15549 284 ELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCP 363 (621)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (621)
.......+...|.+++|+|++++|+++
T Consensus 283 -------~~~~~~~~~~~v~~~~~~~~~~~l~~~---------------------------------------------- 309 (397)
T 1sq9_A 283 -------ASLGEFAHSSWVMSLSFNDSGETLCSA---------------------------------------------- 309 (397)
T ss_dssp ----------CCBSBSSCEEEEEECSSSSEEEEE----------------------------------------------
T ss_pred -------ccccccccCCcEEEEEECCCCCEEEEE----------------------------------------------
Confidence 000011134566777777777666554
Q ss_pred eeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEec-----cc---------------ccceEEEEEcCC
Q psy15549 364 VLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIAN-----IH---------------YTKLTDITWSSD 423 (621)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~h---------------~~~v~~~~~spd 423 (621)
+.|+.|++||+.+++.+..+.. +| ...|++++|+|+
T Consensus 310 ------------------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~ 365 (397)
T 1sq9_A 310 ------------------------GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK 365 (397)
T ss_dssp ------------------------ETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT
T ss_pred ------------------------eCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccc
Confidence 4788899999988888887751 46 899999999999
Q ss_pred C----------CeEEEEeCCCcEEEEEecCCc
Q psy15549 424 G----------KVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 424 g----------~~l~s~s~dg~i~iw~~~~~~ 445 (621)
| ++|++++.||.|++|++.+|+
T Consensus 366 g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 366 GWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 9 799999999999999998763
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=314.93 Aligned_cols=294 Identities=17% Similarity=0.229 Sum_probs=236.9
Q ss_pred eeccccccccCcEEEEEE-----cc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEE
Q psy15549 72 EFASDLSRHQKAVNVVRF-----SP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL 144 (621)
Q Consensus 72 ~~~~~~~~h~~~V~~l~~-----sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l 144 (621)
.....+.+|.+.|++++| ++ ++++|++|+ |+.|++|++...............+.+|...|.+++|+|++.+|
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 345568999999999999 77 999999998 88999999976532211124456788999999999999999999
Q ss_pred EEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC
Q psy15549 145 ASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG 224 (621)
Q Consensus 145 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~ 224 (621)
++|+.|++|++||+.+++.+ ..+.+|...|.+++|+|++++|++++.|+.|++||+..
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~---------------------~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~- 149 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTY---------------------KRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG- 149 (343)
T ss_dssp EEEETTSEEEEEETTSSCEE---------------------EEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-
T ss_pred EEEcCCCcEEEEECCCCcEE---------------------EEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-
Confidence 99999999999999988743 66789999999999999999999999999999999974
Q ss_pred cEEEEec---cCCcceEEEEEcCCC----------CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccccc
Q psy15549 225 KNLGILT---EHKKFVQGVAWDPKN----------QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVP 291 (621)
Q Consensus 225 ~~~~~~~---~~~~~v~~l~~sp~~----------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (621)
....... .|...|.+++|+|++ .+|++++.||.|++||. ..+....+.
T Consensus 150 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~------------------ 210 (343)
T 2xzm_R 150 ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK------------------ 210 (343)
T ss_dssp CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEE------------------
T ss_pred CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEc------------------
Confidence 3333333 688899999999987 78999999999999994 344443332
Q ss_pred ccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCC
Q psy15549 292 LFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPS 371 (621)
Q Consensus 292 ~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (621)
.+...|.+++|+|+|++|++++
T Consensus 211 -----~h~~~v~~~~~s~~g~~l~sgs----------------------------------------------------- 232 (343)
T 2xzm_R 211 -----AHESNVNHLSISPNGKYIATGG----------------------------------------------------- 232 (343)
T ss_dssp -----CCSSCEEEEEECTTSSEEEEEE-----------------------------------------------------
T ss_pred -----CccccceEEEECCCCCEEEEEc-----------------------------------------------------
Confidence 3345678899999888877655
Q ss_pred CCCCCccCCCcEEEEEEcCCcEEEEeCCC-CceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCc--
Q psy15549 372 DDKPLFKLPYRIVIAVATENNILLYDTQH-ASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGI-- 448 (621)
Q Consensus 372 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~-- 448 (621)
.|+.|++||+.. ......+. +...|.+++|+|++++|+++ .|+.|++|++.+++...
T Consensus 233 -----------------~dg~v~iwd~~~~~~~~~~~~--~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~ 292 (343)
T 2xzm_R 233 -----------------KDKKLLIWDILNLTYPQREFD--AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVC 292 (343)
T ss_dssp -----------------TTCEEEEEESSCCSSCSEEEE--CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEE
T ss_pred -----------------CCCeEEEEECCCCcccceeec--CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceE
Confidence 678888888844 33444442 45579999999999877655 68889999998876544
Q ss_pred ccC-----------CCCCcccccCCCCCCCCcccCCCcccHHHhccc
Q psy15549 449 PYV-----------PPSGEESKENDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 449 ~~~-----------~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
.+. .+...+..+.|+|+|..+++++.|+.+++|+.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 293 TIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp ECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred EeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 332 455667888999999999999999999999865
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=326.36 Aligned_cols=303 Identities=21% Similarity=0.289 Sum_probs=240.7
Q ss_pred cccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceeccccccc------------------CCCeEEEEECCC
Q psy15549 79 RHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRH------------------QKAVNVVRFSPN 140 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h------------------~~~V~~i~~sp~ 140 (621)
+|.+.|.+++|+|||++||+|+++.+++|++..+. ....+..| ...|.+++|+|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGS-------LVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCC-------EEEEECC-----------------CCCCBEEEEEECTT
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCC-------EEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 69999999999999999999999999999998762 23333322 235999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15549 141 GELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWD 220 (621)
Q Consensus 141 g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd 220 (621)
|++|++|+.|+.|++||+.+++. ...+.+|...|++++|+|++++|++++.|+.|++||
T Consensus 135 g~~l~s~~~d~~i~iwd~~~~~~---------------------~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 135 GKFLATGAEDRLIRIWDIENRKI---------------------VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 193 (393)
T ss_dssp SSEEEEEETTSCEEEEETTTTEE---------------------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcE---------------------EEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEE
Confidence 99999999999999999988764 366789999999999999999999999999999999
Q ss_pred CCCCcEEEEeccCCcceEEEEEcC-CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcc
Q psy15549 221 VHKGKNLGILTEHKKFVQGVAWDP-KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMK 299 (621)
Q Consensus 221 ~~~~~~~~~~~~~~~~v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (621)
++++++...+. +...+.+++|+| ++++|++++.|+.|++||++++..+..+..... ....+.
T Consensus 194 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~----------------~~~~h~ 256 (393)
T 1erj_A 194 LRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE----------------SGTGHK 256 (393)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC----------------------CCCS
T ss_pred CCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccccc----------------CCCCCC
Confidence 99999887775 567799999999 899999999999999999999887765532110 112456
Q ss_pred cceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccC
Q psy15549 300 SFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKL 379 (621)
Q Consensus 300 ~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (621)
..|.+++|+|+|++|++++ .|+.+++|++.........
T Consensus 257 ~~v~~v~~~~~g~~l~s~s-----~d~~v~~wd~~~~~~~~~~------------------------------------- 294 (393)
T 1erj_A 257 DSVYSVVFTRDGQSVVSGS-----LDRSVKLWNLQNANNKSDS------------------------------------- 294 (393)
T ss_dssp SCEEEEEECTTSSEEEEEE-----TTSEEEEEEC----------------------------------------------
T ss_pred CCEEEEEECCCCCEEEEEe-----CCCEEEEEECCCCCCcccc-------------------------------------
Confidence 6789999999998888877 6666666665421100000
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccc
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESK 459 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~ 459 (621)
-....+.....+ .+|...|.+++|+|++++|++|+.||.|++||+.+++....+.+|...+..
T Consensus 295 ----------------~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~ 357 (393)
T 1erj_A 295 ----------------KTPNSGTCEVTY-IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVIS 357 (393)
T ss_dssp ----------------------CEEEEE-ECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred ----------------cCCCCCcceEEE-ecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEE
Confidence 000011223333 469999999999999999999999999999999999998899999888877
Q ss_pred cCCC------CCCCCcccCCCcccHHHhcccC
Q psy15549 460 ENDP------TKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 460 ~~~~------~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
+.++ |++..+++++.|+.+++|+...
T Consensus 358 v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 358 VAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 7655 4678899999999999998754
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-39 Score=315.64 Aligned_cols=306 Identities=19% Similarity=0.260 Sum_probs=222.8
Q ss_pred eccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccc-cc-cCCCeEEEEECCCCCEEEEEeC
Q psy15549 73 FASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDL-SR-HQKAVNVVRFSPNGELLASGDD 149 (621)
Q Consensus 73 ~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~-~~-h~~~V~~i~~sp~g~~l~s~s~ 149 (621)
+...+.+|.+.|.+++|+|+ +||+|+ |+.|++|++..+.. .....+ .+ |...|.+++|+|++++|++|+.
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~-----~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~ 78 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF-----TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF 78 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC-----EEEEEECTTCCCSCEEEEEECTTSSEEEEEET
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe-----EEEEEEecCCccCCEEEEEECCCCCEEEEEeC
Confidence 45568899999999999998 888887 89999999976421 233333 34 9999999999999999999999
Q ss_pred CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC----Cc
Q psy15549 150 ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK----GK 225 (621)
Q Consensus 150 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~----~~ 225 (621)
|++|+|||+....... ..+.....+.+|...|.+++|+|++++|++|+.|+.|++||+.. .+
T Consensus 79 D~~v~iw~~~~~~~~~--------------~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~ 144 (330)
T 2hes_X 79 DSTVSIWAKEESADRT--------------FEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYE 144 (330)
T ss_dssp TSCEEEEEC---------------------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCE
T ss_pred CCcEEEEEcccCcCcc--------------ccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeE
Confidence 9999999986432100 01123466789999999999999999999999999999999943 25
Q ss_pred EEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCc--eeeeecccCCCCCCCccccccccccccccCCccccee
Q psy15549 226 NLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSK--KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303 (621)
Q Consensus 226 ~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 303 (621)
++..+.+|...|.+++|+|++.+|++++.|++|++||+.++ +.+..+. .+...|.
T Consensus 145 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-----------------------~h~~~v~ 201 (330)
T 2hes_X 145 CISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-----------------------GHEGTVW 201 (330)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-----------------------CCSSCEE
T ss_pred EEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-----------------------CCCCcEE
Confidence 67788899999999999999999999999999999998765 3444443 3455678
Q ss_pred eeeecCC--CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCC
Q psy15549 304 RLTFSPD--GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPY 381 (621)
Q Consensus 304 ~~~~spd--g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (621)
+++|+|+ +.+|++++ .|+++++|++.....
T Consensus 202 ~~~~~~~~~~~~l~s~s-----~D~~v~iw~~~~~~~------------------------------------------- 233 (330)
T 2hes_X 202 SSDFDKTEGVFRLCSGS-----DDSTVRVWKYMGDDE------------------------------------------- 233 (330)
T ss_dssp EEEECCSSSSCEEEEEE-----TTSCEEEEEEEEECT-------------------------------------------
T ss_pred EEEecCCCCeeEEEEEe-----CCCeEEEEEecCCCc-------------------------------------------
Confidence 8899988 55666655 455555555432100
Q ss_pred cEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc--CC-cccCCCCC-cc
Q psy15549 382 RIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE--IG-IPYVPPSG-EE 457 (621)
Q Consensus 382 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~--~~-~~~~~~~~-~~ 457 (621)
.+ ...| .....+...|...|.+++|++++ +|++++.||.|++|+..+++ .. ..+..|.. .+
T Consensus 234 --------~~-~~~~-----~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v 298 (330)
T 2hes_X 234 --------DD-QQEW-----VCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEI 298 (330)
T ss_dssp --------TS-CEEE-----EEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCE
T ss_pred --------cc-ccee-----EEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceE
Confidence 00 0000 12223323488999999999765 89999999999999998773 22 23345655 67
Q ss_pred cccCCCC--CCCCcccCCCcccHHHhcccC
Q psy15549 458 SKENDPT--KGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 458 ~~~~~~~--~~~~~~s~~~~~~~~~w~~~~ 485 (621)
..+.+++ ++..+++++.|+.+++|+++.
T Consensus 299 ~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 299 NVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 7888888 688999999999999998753
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=320.03 Aligned_cols=306 Identities=14% Similarity=0.171 Sum_probs=245.2
Q ss_pred eeeecCCCCeEEEeccccc-cCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQ-EKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~-~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
.....|.+.|++++|+|++ + +|++|+.||.|+ ||++.++..... ..+.+|...|.
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~-----~l~s~~~dg~i~--------------iwd~~~~~~~~~-----~~~~~h~~~v~ 122 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPT-----TVAVGSKGGDII--------------LWDYDVQNKTSF-----IQGMGPGDAIT 122 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTT-----EEEEEEBTSCEE--------------EEETTSTTCEEE-----ECCCSTTCBEE
T ss_pred EeccCCCCCEEEEEECCCCCC-----EEEEEcCCCeEE--------------EEeCCCccccee-----eecCCcCCcee
Confidence 3456789999999999999 7 999999999999 888876654322 22357999999
Q ss_pred EEEEcc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 86 VVRFSP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 86 ~l~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
+++|+| ++++|++++ |+.|++|++... ..........|...|.+++|+|++++|++|+.|+.|++||+. ++.
T Consensus 123 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 196 (383)
T 3ei3_B 123 GMKFNQFNTNQLFVSSIRGATTLRDFSGS-----VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHE 196 (383)
T ss_dssp EEEEETTEEEEEEEEETTTEEEEEETTSC-----EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCE
T ss_pred EEEeCCCCCCEEEEEeCCCEEEEEECCCC-----ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCE
Confidence 999999 788999888 888999999853 123333334566889999999999999999999999999984 332
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCC----CcEEEEeccCCcceE
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST-HLISGSVDNTAIMWDVHK----GKNLGILTEHKKFVQ 238 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~-~l~s~~~dg~i~vwd~~~----~~~~~~~~~~~~~v~ 238 (621)
...+.+|...|.+++|+|+++ +|++++.|+.|++||+++ +..+..+ .|...|.
T Consensus 197 ---------------------~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~ 254 (383)
T 3ei3_B 197 ---------------------IFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVN 254 (383)
T ss_dssp ---------------------EEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEE
T ss_pred ---------------------EEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceE
Confidence 366778999999999999998 999999999999999998 6666666 6999999
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 239 GVAWDP-KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 239 ~l~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
+++|+| ++++|++++.|+.|++||+++++....+..+.... ..+...+. +.|+|++..++++
T Consensus 255 ~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~----------------~~~~~~~~-~~~~p~~~~~~~~ 317 (383)
T 3ei3_B 255 AAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQ----------------FQHLTPIK-ATWHPMYDLIVAG 317 (383)
T ss_dssp EEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCC----------------CTTSCCCC-CEECSSSSEEEEE
T ss_pred EEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccc----------------cccccceE-EeccCCCCceEEE
Confidence 999999 99999999999999999999887766654332211 11122233 5788888777654
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEe
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYD 397 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 397 (621)
.. +++.+ +++.|+.|++||
T Consensus 318 ~s-----------------------------------------------------------~dg~~--s~s~d~~i~iwd 336 (383)
T 3ei3_B 318 RY-----------------------------------------------------------PDDQL--LLNDKRTIDIYD 336 (383)
T ss_dssp CB-----------------------------------------------------------CCTTT--CTTCCCCEEEEE
T ss_pred ec-----------------------------------------------------------CCccc--ccCCCCeEEEEe
Confidence 31 12233 566899999999
Q ss_pred CCCCceeEEEecc-cccceEEEEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 398 TQHASPFAFIANI-HYTKLTDITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 398 ~~~~~~~~~~~~~-h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
+.+++.+..+... |...+..++|+|+|++|++++ ||.|++|++++
T Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 337 ANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred cCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 9999998888542 456788889999999999997 99999999874
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=334.01 Aligned_cols=347 Identities=10% Similarity=0.033 Sum_probs=243.9
Q ss_pred eeeecCCCCeEEEeccccccCC----cceEEEEec-------------------CCceEEeeeccCccccccceeEEecc
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKD----NCYRIVTGG-------------------ADSHVFDYLLKIPHRLKTGKIWYLTE 63 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~----~~~~l~tg~-------------------~dg~v~~~d~~~~~~~~~~~iw~~~~ 63 (621)
...+.+.+.|++|+|+|++... ...+||+|+ .|+.|+ ||++..
T Consensus 127 ~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~--------------iWd~~~ 192 (524)
T 2j04_B 127 GFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQ--------------IFKMNT 192 (524)
T ss_dssp EEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEE--------------EEEEET
T ss_pred eEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEE--------------EEEccC
Confidence 3456678899999999997100 012776644 566676 999877
Q ss_pred ccccccceeeccccccccCcEEEEEEccC------CCEEEEEc-CCceEEEEeccCcccc----ccceecccccccCCCe
Q psy15549 64 RESGIANVEFASDLSRHQKAVNVVRFSPN------GELLASGD-DVGKEIWYLTERESGI----ANVEFASDLSRHQKAV 132 (621)
Q Consensus 64 ~~~~~~~~~~~~~~~~h~~~V~~l~~spd------g~~las~~-d~~v~iw~~~~~~~~~----~~~~~~~~~~~h~~~V 132 (621)
++... .....+.+|.+.|.+++|+|+ +.+||+++ |+.|+||++..+.... ........+.+|...|
T Consensus 193 ~~~~~---~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v 269 (524)
T 2j04_B 193 STLHC---VKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLI 269 (524)
T ss_dssp TTCCE---EEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCE
T ss_pred CCCCc---eEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCE
Confidence 65321 122345678899999999997 57999888 8899999997653210 0001234577899999
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEE--EECCCC-CEEEE
Q psy15549 133 NVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI--SWSPTS-THLIS 209 (621)
Q Consensus 133 ~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i--~~spd~-~~l~s 209 (621)
++++|++++ .|++|+.||+|++||+.++... ...+.+|...|+++ .|+|++ .+|++
T Consensus 270 ~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~--------------------~~~~~~H~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 270 TTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVP--------------------SFYDQVHDSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp EEEEESSSS-EEEEEETTSEEEEEETTBCSSC--------------------SEEEECSSSCEEEEEEECCTTSCCEEEE
T ss_pred EEEEecCCC-eEEEEeCCCEEEEEECCCCCCc--------------------eEEeecccccEEEEEEEcCCCCCeEEEE
Confidence 999999864 8999999999999999876432 14567899999999 578888 89999
Q ss_pred EeCCCeEEEEECCCCcEEEEeccCCc--ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccc
Q psy15549 210 GSVDNTAIMWDVHKGKNLGILTEHKK--FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFD 287 (621)
Q Consensus 210 ~~~dg~i~vwd~~~~~~~~~~~~~~~--~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (621)
|+.|++|+|||+++++++..+.+|.. .|.+++|+|+++.|++++.|++|++||++++..+..+.
T Consensus 329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~-------------- 394 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV-------------- 394 (524)
T ss_dssp EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE--------------
T ss_pred eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee--------------
Confidence 99999999999998887766666653 58899999999999999999999999999887665554
Q ss_pred ccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceec-CCcccceeeeeccceee
Q psy15549 288 KVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCL-PSLQYYSVAVKCCPVLF 366 (621)
Q Consensus 288 ~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 366 (621)
.|...|.+++|+|+|++|++++ .|+++++|+.... ......... ......+..+.|+|
T Consensus 395 ---------gH~~~V~sva~Sp~g~~l~Sgs-----~Dgtv~lwd~~~~----~~~~~~~~~~~~~~~~v~~v~~sp--- 453 (524)
T 2j04_B 395 ---------SRETTITAIGVSRLHPMVLAGS-----ADGSLIITNAARR----LLHGIKNSSATQKSLRLWKWDYSI--- 453 (524)
T ss_dssp ---------ECSSCEEEEECCSSCCBCEEEE-----TTTEEECCBSCSS----TTTCC------CCCCEEEECBCCS---
T ss_pred ---------cCCCceEEEEeCCCCCeEEEEE-----CCCEEEEEechHh----hccccccCccceeeeEEEEeccCC---
Confidence 3455679999999999999999 8999999996421 110000000 00111344566665
Q ss_pred ecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCC-CCceeEEEecccccceEEEEEcCCCC---eEEEEeCCCcEEEEEec
Q psy15549 367 ELKPSDDKPLFKLPYRIVIAVATENNILLYDTQ-HASPFAFIANIHYTKLTDITWSSDGK---VLIASSTDGYCSIISFG 442 (621)
Q Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~h~~~v~~~~~spdg~---~l~s~s~dg~i~iw~~~ 442 (621)
+++.+ ... +.+.+|+.. ++..+..+ .+|...|.+++|+|++. +||+|+.||.|+||++.
T Consensus 454 -------------~g~~~-~~~--~~~~~~~~~~~g~~~~~l-~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 454 -------------KDDKY-RID--SSYEVYPLTVNDVSKAKI-DAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp -------------SSCEE-EEC--CCCCCCC--------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred -------------CCCeE-Ecc--CCceecccccCCcceeee-cCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence 33422 221 223333332 34555555 46999999999999964 99999999999999987
Q ss_pred C
Q psy15549 443 D 443 (621)
Q Consensus 443 ~ 443 (621)
-
T Consensus 517 ~ 517 (524)
T 2j04_B 517 L 517 (524)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=325.11 Aligned_cols=254 Identities=17% Similarity=0.212 Sum_probs=202.6
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
.+++...|.++|++++|+|+++ +||+|+.|+.|+ ||++.++. ......+.+|...|
T Consensus 3 ~~~~~~~~~~~v~~~~~s~~g~-----~l~~~~~d~~i~--------------iw~~~~~~-----~~~~~~~~~h~~~v 58 (377)
T 3dwl_C 3 TSQVLHILPKPSYEHAFNSQRT-----EFVTTTATNQVE--------------LYEQDGNG-----WKHARTFSDHDKIV 58 (377)
T ss_dssp CEEEEEECSSCCSCCEECSSSS-----EEECCCSSSCBC--------------EEEEETTE-----EEECCCBCCCSSCE
T ss_pred cceeEecCCCcEEEEEECCCCC-----EEEEecCCCEEE--------------EEEccCCc-----eEEEEEEecCCceE
Confidence 4666777888999999999998 999999999999 99988652 12344588999999
Q ss_pred EEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 85 NVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 85 ~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
.+++|+|++++|++++ |+.|++|++..+. .+.....+.+|...|.+++|+|++++|++++.|+.|++||+.++..
T Consensus 59 ~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 59 TCVDWAPKSNRIVTCSQDRNAYVYEKRPDG----TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND 134 (377)
T ss_dssp EEEEECTTTCCEEEEETTSSEEEC----------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEEcCCCC----ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc
Confidence 9999999999999988 8899999998763 1134556778999999999999999999999999999999988764
Q ss_pred CCCCCCCCcccccccccceeeeeeecC-CCCCeEEEEECCCCCEEEEEeCCCeEEEEECC------------------CC
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRG-HLEDVYDISWSPTSTHLISGSVDNTAIMWDVH------------------KG 224 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~------------------~~ 224 (621)
... ...+.. |...|++++|+|++++|++++.|+.|++||+. .+
T Consensus 135 ~~~------------------~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 196 (377)
T 3dwl_C 135 WWV------------------SKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFN 196 (377)
T ss_dssp CCC------------------CEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEE
T ss_pred cee------------------eeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchh
Confidence 211 245556 99999999999999999999999999999985 35
Q ss_pred cEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCcee----eeecccCCCCCCCccccccccccccccCCccc
Q psy15549 225 KNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV----ISRACRSKLPVDSSHELFDKVVPLFHDDTMKS 300 (621)
Q Consensus 225 ~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (621)
+++..+ .|...|.+++|+|++++|++++.||.|++||+.+++. +..+. .+..
T Consensus 197 ~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-----------------------~~~~ 252 (377)
T 3dwl_C 197 TVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVK-----------------------LSQL 252 (377)
T ss_dssp EEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEE-----------------------CSSS
T ss_pred hhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeec-----------------------CCCC
Confidence 566667 8999999999999999999999999999999998765 33332 3455
Q ss_pred ceeeeeecCCCCeEEeccccccCCCCCCcceeee
Q psy15549 301 FFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 301 ~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
.|.+++|+|++++|++++ .++.+ +|+..
T Consensus 253 ~v~~~~~s~~~~~l~~~~-----~~~~~-~~~~~ 280 (377)
T 3dwl_C 253 PLRSLLWANESAIVAAGY-----NYSPI-LLQGN 280 (377)
T ss_dssp CEEEEEEEETTEEEEEES-----SSSEE-EECCC
T ss_pred ceEEEEEcCCCCEEEEEc-----CCcEE-EEEeC
Confidence 679999999999998876 44444 66543
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-38 Score=349.73 Aligned_cols=382 Identities=16% Similarity=0.204 Sum_probs=293.9
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
....|.++|++++|+|+++ +|++|+.||.|+ +|++.++.... .+.+|.+.|.++
T Consensus 50 ~~~~~~~~v~~~~~s~~~~-----~l~~~~~dg~i~--------------vw~~~~~~~~~-------~~~~~~~~v~~~ 103 (814)
T 3mkq_A 50 SIQVTETPVRAGKFIARKN-----WIIVGSDDFRIR--------------VFNYNTGEKVV-------DFEAHPDYIRSI 103 (814)
T ss_dssp EEECCSSCEEEEEEEGGGT-----EEEEEETTSEEE--------------EEETTTCCEEE-------EEECCSSCEEEE
T ss_pred EEecCCCcEEEEEEeCCCC-----EEEEEeCCCeEE--------------EEECCCCcEEE-------EEecCCCCEEEE
Confidence 4456889999999999998 999999999999 99988765433 478899999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
+|+|++++|++++ |+.|++|++..+. .....+.+|...|.+++|+| ++.+|++++.||.|++||+.++....
T Consensus 104 ~~s~~~~~l~~~~~dg~i~vw~~~~~~------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~ 177 (814)
T 3mkq_A 104 AVHPTKPYVLSGSDDLTVKLWNWENNW------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (814)
T ss_dssp EECSSSSEEEEEETTSEEEEEEGGGTS------EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE
T ss_pred EEeCCCCEEEEEcCCCEEEEEECCCCc------eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee
Confidence 9999999999988 7889999998753 45567788999999999999 88999999999999999998776531
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEc
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP--TSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD 243 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp--d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~s 243 (621)
.....+...+.+++|+| ++.+|++++.||.|++||+.+++.+..+..|...|.+++|+
T Consensus 178 --------------------~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~ 237 (814)
T 3mkq_A 178 --------------------TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH 237 (814)
T ss_dssp --------------------EEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred --------------------EEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 22334558899999999 99999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe--EEeccccc
Q psy15549 244 PKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL--LIAPSGCL 321 (621)
Q Consensus 244 p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~--l~~~s~~~ 321 (621)
|++++|++++.||.|++||+.+++.+..+..+ ...+.+++|+|++.. ++++
T Consensus 238 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-----------------------~~~v~~~~~~~~~~~~~~~~~---- 290 (814)
T 3mkq_A 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG-----------------------LERSWCIATHPTGRKNYIASG---- 290 (814)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCSEEEEECCS-----------------------SSSEEEEEECTTCGGGEEEEE----
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEeecC-----------------------CCcEEEEEEccCCCceEEEEE----
Confidence 99999999999999999999998877766432 335678888888863 4433
Q ss_pred cCCCCCCcceeeeeeeeecccC------------------------------------CCceecCCcccceeeeecccee
Q psy15549 322 ENSDSTRKPISVTHVFTRACLN------------------------------------KPAVCLPSLQYYSVAVKCCPVL 365 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 365 (621)
.++.+.+|++.......... .....+..+...+.++
T Consensus 291 --~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 362 (814)
T 3mkq_A 291 --FDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSL------ 362 (814)
T ss_dssp --ETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEE------
T ss_pred --eCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCcee------
Confidence 35555555543211000000 0000011111122222
Q ss_pred eecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 366 FELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
.++++++++++++ ++.+.+|++..... .+.+.+.+++|+|||++|++++.+|.|++|+.
T Consensus 363 ----------~~spdg~~la~~~-~~~~~i~~~~~~~~------~~~~~i~~~~~spdg~~la~~~~~g~v~l~~~---- 421 (814)
T 3mkq_A 363 ----------AHSPNGRFVTVVG-DGEYVIYTALAWRN------KAFGKCQDFVWGPDSNSYALIDETGQIKYYKN---- 421 (814)
T ss_dssp ----------EECTTSSEEEEEE-TTEEEEEETTTTEE------EEEEECSEEEECTTSSCEEEECTTCCEEEEET----
T ss_pred ----------EECCCCCEEEEec-CCEEEEEECccccc------cCCCceEEEEEeCCCCeEEEEeCCCcEEEEEC----
Confidence 3444677777776 89999999765432 24467889999999999999999999999963
Q ss_pred CCcccCCCCCcccccCCCCCC---CCcccCCCcccHHHhccc-Ccccccccc---CCCCCCCc
Q psy15549 446 IGIPYVPPSGEESKENDPTKG---EPVRSEDKPRSAEQAKGE-GKVLGEKQT---GNKVSPTD 501 (621)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~w~~~-~~~~~~~~~---~~~~s~~~ 501 (621)
+..+...+..+.+++++ ..+++++.++.+++|+++ ++.+..+.. ...++|++
T Consensus 422 ----~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~s~dg 480 (814)
T 3mkq_A 422 ----FKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDNG 480 (814)
T ss_dssp ----TEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCEEEEEECTTS
T ss_pred ----CCCccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEecCCCEEEEcCCC
Confidence 34455667788899998 688888999999999965 444444332 34455655
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=316.99 Aligned_cols=300 Identities=12% Similarity=0.097 Sum_probs=224.3
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCC-------ceEEeeeccCccccccceeEEecccccccc-cee--ecccccccc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGAD-------SHVFDYLLKIPHRLKTGKIWYLTERESGIA-NVE--FASDLSRHQ 81 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~d-------g~v~~~d~~~~~~~~~~~iw~~~~~~~~~~-~~~--~~~~~~~h~ 81 (621)
..-||+|++|+||++ +||+|+.+ +.|+ +|++........ .+. ....+.+|.
T Consensus 13 ~g~PV~sv~fs~dg~-----~l~sGGg~~~~sGi~N~i~--------------~w~~~~~~~~~~~~~~~~~~~~l~~~~ 73 (365)
T 4h5i_A 13 VGYPAYGAKFLNNDT-----LLVAGGGGEGNNGIPNKLT--------------VLRVDPTKDTEKEQFHILSEFALEDND 73 (365)
T ss_dssp CSSCEEEEEEEETTE-----EEEEEECCSSSSSCCEEEE--------------EEEECTTSSSHHHHEEEEEEEECCTTS
T ss_pred CCCCEEEEEEeCCCc-----EEEEECCCccccCCCCEEE--------------EEEEcCCCcceeeeeeeeeEEEccCCC
Confidence 446999999999998 99998754 3588 888765543211 111 112467888
Q ss_pred CcEEEEEEccCCCEEEEEc------------CCceEEEEeccCccccccceec--ccccccCCCeEEEEECCCCCEEEEE
Q psy15549 82 KAVNVVRFSPNGELLASGD------------DVGKEIWYLTERESGIANVEFA--SDLSRHQKAVNVVRFSPNGELLASG 147 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~------------d~~v~iw~~~~~~~~~~~~~~~--~~~~~h~~~V~~i~~sp~g~~l~s~ 147 (621)
..|.+++++ +..+++|. ++.+++|++............. .....+...+.+++|+|||++|+++
T Consensus 74 ~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~a 151 (365)
T 4h5i_A 74 DSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIA 151 (365)
T ss_dssp CCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEE
T ss_pred CceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEE
Confidence 899888765 55666652 5678999987764322211111 1223455679999999999988754
Q ss_pred --eCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q psy15549 148 --DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK 225 (621)
Q Consensus 148 --s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~ 225 (621)
+.|++|+|||+.+++.+ ..+ .|...|++++|+|||++|++++.+ .+++|+..++.
T Consensus 152 s~~~d~~i~iwd~~~~~~~---------------------~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~ 208 (365)
T 4h5i_A 152 SSKVPAIMRIIDPSDLTEK---------------------FEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGS 208 (365)
T ss_dssp ESCSSCEEEEEETTTTEEE---------------------EEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCC
T ss_pred ECCCCCEEEEeECCCCcEE---------------------EEe-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCc
Confidence 47899999999988753 223 477889999999999999999854 57777777777
Q ss_pred EEEE--eccCCcceEEEEEcCCCCEEEEEeCCC----cEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcc
Q psy15549 226 NLGI--LTEHKKFVQGVAWDPKNQYVATLSSDR----SLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMK 299 (621)
Q Consensus 226 ~~~~--~~~~~~~v~~l~~sp~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (621)
.+.. ...|...|.+++|+|+++++++++.|+ .+++|++......... ......+.
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~-------------------~~~~~~~~ 269 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLR-------------------SKQVTNRF 269 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEE-------------------EEEEESSC
T ss_pred ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceeccee-------------------eeeecCCC
Confidence 6543 356888999999999999999999887 6888988765432111 01112344
Q ss_pred cceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccC
Q psy15549 300 SFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKL 379 (621)
Q Consensus 300 ~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (621)
..|++++|+|||++||+++
T Consensus 270 ~~V~~~~~Spdg~~lasgs------------------------------------------------------------- 288 (365)
T 4h5i_A 270 KGITSMDVDMKGELAVLAS------------------------------------------------------------- 288 (365)
T ss_dssp SCEEEEEECTTSCEEEEEE-------------------------------------------------------------
T ss_pred CCeEeEEECCCCCceEEEc-------------------------------------------------------------
Confidence 5678889998888777655
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
.|+.|+|||+.+++++..+..+|...|++++|||||++||+||.|++|+||++..+
T Consensus 289 ---------~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 289 ---------NDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ---------TTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred ---------CCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 78999999999999999887789999999999999999999999999999999643
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=314.33 Aligned_cols=325 Identities=11% Similarity=0.103 Sum_probs=266.5
Q ss_pred ccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy15549 80 HQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~ 158 (621)
|.+.|.+++|+|||++++++. ++.+.+|..... .......+|...|++++|+|++++|++++ ||.|++||+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~ 79 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRH-------ARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDI 79 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSE-------EEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEET
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCc-------cccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEEC
Confidence 467899999999999999877 555655544332 22333447999999999999999999999 999999999
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEeccCCcc
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK--NLGILTEHKKF 236 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~ 236 (621)
.++.....+ ......+|...|.+++|+|++++|++++.||.|++||+.+++ ....+..|...
T Consensus 80 ~~~~~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 143 (337)
T 1gxr_A 80 SHPGNKSPV----------------SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPA 143 (337)
T ss_dssp TSTTCCSCS----------------EEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSC
T ss_pred CCCCceeee----------------ecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCc
Confidence 887654333 111223789999999999999999999999999999999887 56677889999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
|.+++|+|++++|++++.||.|++||+++++.+..+.. +...+.+++|+|++++|++
T Consensus 144 i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-----------------------~~~~i~~~~~~~~~~~l~~ 200 (337)
T 1gxr_A 144 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-----------------------HTDGASCIDISNDGTKLWT 200 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----------------------CSSCEEEEEECTTSSEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec-----------------------ccCceEEEEECCCCCEEEE
Confidence 99999999999999999999999999999887776642 3456799999999999999
Q ss_pred ccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEE
Q psy15549 317 PSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLY 396 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw 396 (621)
++ .|+.+++|++........ ..+...+.++.|+| ++..+++++.++.|++|
T Consensus 201 ~~-----~dg~i~~~d~~~~~~~~~--------~~~~~~v~~~~~s~----------------~~~~l~~~~~~~~i~~~ 251 (337)
T 1gxr_A 201 GG-----LDNTVRSWDLREGRQLQQ--------HDFTSQIFSLGYCP----------------TGEWLAVGMESSNVEVL 251 (337)
T ss_dssp EE-----TTSEEEEEETTTTEEEEE--------EECSSCEEEEEECT----------------TSSEEEEEETTSCEEEE
T ss_pred Ee-----cCCcEEEEECCCCceEee--------ecCCCceEEEEECC----------------CCCEEEEEcCCCcEEEE
Confidence 98 899999999753221111 12344566667766 77899999999999999
Q ss_pred eCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcc
Q psy15549 397 DTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPR 476 (621)
Q Consensus 397 d~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 476 (621)
|+.+++... + ..|...|.+++|+|++++|++++.||.|++|++.+++..... .+...+..+.+++++..+++++.++
T Consensus 252 ~~~~~~~~~-~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 328 (337)
T 1gxr_A 252 HVNKPDKYQ-L-HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDK 328 (337)
T ss_dssp ETTSSCEEE-E-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTS
T ss_pred ECCCCCeEE-E-cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCC
Confidence 999887653 3 458999999999999999999999999999999998876433 4566788889999999999999999
Q ss_pred cHHHhcc
Q psy15549 477 SAEQAKG 483 (621)
Q Consensus 477 ~~~~w~~ 483 (621)
.+++|++
T Consensus 329 ~i~iw~~ 335 (337)
T 1gxr_A 329 KATVYEV 335 (337)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 9999975
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-37 Score=316.80 Aligned_cols=321 Identities=21% Similarity=0.298 Sum_probs=268.1
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
......+|.+.|.. ++++++. +|++|+.||.|+ +||+.+++.. ..+.+|.+.|
T Consensus 110 ~~~~l~~h~~~v~~-~~~~~g~-----~l~sg~~dg~i~--------------vwd~~~~~~~-------~~~~~h~~~v 162 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQFCGN-----RIVSGSDDNTLK--------------VWSAVTGKCL-------RTLVGHTGGV 162 (445)
T ss_dssp CCEEEECSTTSCEE-EEEEETT-----EEEEEETTSCEE--------------EEETTTCCEE-------EECCCCSSCE
T ss_pred eeEEecccCCCcEE-EEEEcCC-----EEEEEECCCcEE--------------EEECCCCcEE-------EEEcCCCCCE
Confidence 44566778877533 3555677 999999999999 9998876543 3478999999
Q ss_pred EEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 85 NVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 85 ~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
.+++|+ +.+|++|+ |+.|++|++..+ .....+.+|...|.+++|+ +++|++|+.||.|++||+.+++.
T Consensus 163 ~~~~~~--~~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~ 231 (445)
T 2ovr_B 163 WSSQMR--DNIIISGSTDRTLKVWNAETG-------ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQC 231 (445)
T ss_dssp EEEEEE--TTEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCE
T ss_pred EEEEec--CCEEEEEeCCCeEEEEECCcC-------cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcE
Confidence 999998 56888887 889999999877 6677888999999999995 56899999999999999998774
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEc
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD 243 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~s 243 (621)
+ ..+.+|...|.+++| ++++|++|+.||.|++||+++++.+..+.+|...|.+++|
T Consensus 232 ~---------------------~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~- 287 (445)
T 2ovr_B 232 L---------------------HVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF- 287 (445)
T ss_dssp E---------------------EEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-
T ss_pred E---------------------EEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-
Confidence 3 567789999999999 7889999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccC
Q psy15549 244 PKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLEN 323 (621)
Q Consensus 244 p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~ 323 (621)
++.+|++++.||.|++||+++++.+..+..+ ...+.++.+ +++++++++
T Consensus 288 -~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----------------------~~~v~~~~~--~~~~l~~~~----- 336 (445)
T 2ovr_B 288 -DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH-----------------------QSLTSGMEL--KDNILVSGN----- 336 (445)
T ss_dssp -CSSEEEEEETTSCEEEEETTTCCEEEEECCC-----------------------CSCEEEEEE--ETTEEEEEE-----
T ss_pred -CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC-----------------------cccEEEEEE--eCCEEEEEe-----
Confidence 7899999999999999999999887776433 233455555 567999988
Q ss_pred CCCCCcceeeeeeeeecccCCCceecC---CcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 324 SDSTRKPISVTHVFTRACLNKPAVCLP---SLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 324 ~d~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
.|+.+++|++.... ....+. .+...+.++.+.+ +++++++.||.|++||+.+
T Consensus 337 ~dg~i~vwd~~~~~-------~~~~~~~~~~~~~~v~~~~~~~------------------~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 337 ADSTVKIWDIKTGQ-------CLQTLQGPNKHQSAVTCLQFNK------------------NFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp TTSCEEEEETTTCC-------EEEEECSTTSCSSCEEEEEECS------------------SEEEEEETTSEEEEEETTT
T ss_pred CCCeEEEEECCCCc-------EEEEEccCCCCCCCEEEEEECC------------------CEEEEEeCCCeEEEEECCC
Confidence 89999999975322 222222 2566677777654 7899999999999999999
Q ss_pred CceeEEEe----cccccceEEEEEcCCCCeEEEEeCCCc----EEEEEecC
Q psy15549 401 ASPFAFIA----NIHYTKLTDITWSSDGKVLIASSTDGY----CSIISFGD 443 (621)
Q Consensus 401 ~~~~~~~~----~~h~~~v~~~~~spdg~~l~s~s~dg~----i~iw~~~~ 443 (621)
++.+..+. .+|...|++++|+|+|.+|++|+.||+ |.+||+..
T Consensus 392 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 392 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp CCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 99888773 357889999999999999999999998 99999974
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=310.38 Aligned_cols=317 Identities=13% Similarity=0.178 Sum_probs=233.8
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecC---CceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGA---DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~---dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
...|.++|++++|+|++. .++++|+. ||.|+ ||++.++..... ...+|...|.
T Consensus 14 ~~~h~~~v~~~~~~p~~~----~l~~~~s~~~~d~~v~--------------iw~~~~~~~~~~------~~~~~~~~v~ 69 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSA----KFVTMGNFARGTGVIQ--------------LYEIQHGDLKLL------REIEKAKPIK 69 (357)
T ss_dssp EEECSSCEEEEEECTTSS----EEEEEEC--CCCEEEE--------------EEEECSSSEEEE------EEEEESSCEE
T ss_pred ccCCCCceEEEEEcCCCc----eEEEecCccCCCcEEE--------------EEeCCCCcccce------eeecccCcEE
Confidence 345999999999999996 36667776 99999 999887653221 1347899999
Q ss_pred EEEEccC---CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEE------CCCCCEEEEEeCCCcEEE
Q psy15549 86 VVRFSPN---GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRF------SPNGELLASGDDESTIIV 155 (621)
Q Consensus 86 ~l~~spd---g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~------sp~g~~l~s~s~dg~i~v 155 (621)
+++|+|+ +.+|++++ ++.|++|++..+. .....+.+|...|.+++| +|++++|++++.||.|++
T Consensus 70 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~v 143 (357)
T 3i2n_A 70 CGTFGATSLQQRYLATGDFGGNLHIWNLEAPE------MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKV 143 (357)
T ss_dssp EEECTTCCTTTCCEEEEETTSCEEEECTTSCS------SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEE
T ss_pred EEEEcCCCCCCceEEEecCCCeEEEEeCCCCC------ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEE
Confidence 9999998 68999888 8899999998763 256677899999999954 789999999999999999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCC----CCCeEEEE----ECCCCCEEEEEeCCCeEEEEECCCCcEE
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGH----LEDVYDIS----WSPTSTHLISGSVDNTAIMWDVHKGKNL 227 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~i~----~spd~~~l~s~~~dg~i~vwd~~~~~~~ 227 (621)
||+.++... ...+..| ...+.+++ |+|++++|++++.||.|++||+++++..
T Consensus 144 wd~~~~~~~--------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 144 WDPRQKDDP--------------------VANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR 203 (357)
T ss_dssp ECTTSCSSC--------------------SEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE
T ss_pred EeCCCCCCc--------------------ceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee
Confidence 999987622 1333333 34789998 7889999999999999999999998875
Q ss_pred EEeccCCcceEEEEEcC---CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceee
Q psy15549 228 GILTEHKKFVQGVAWDP---KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 304 (621)
.. ..|...|.+++|+| ++.+|++++.||.|++||+++++....+.. .....+...|.+
T Consensus 204 ~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------------------~~~~~~~~~v~~ 264 (357)
T 3i2n_A 204 WE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFAS------------------VSEKAHKSTVWQ 264 (357)
T ss_dssp EE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEE------------------EEEECCSSCEEE
T ss_pred ee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceee------------------eccCCCcCCEEE
Confidence 54 56889999999999 999999999999999999988765433320 011234567889
Q ss_pred eeecCCCC-eEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcE
Q psy15549 305 LTFSPDGQ-LLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRI 383 (621)
Q Consensus 305 ~~~spdg~-~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (621)
++|+|++. +|++++ .|+.+++|++.......... . .+..
T Consensus 265 ~~~~~~~~~~l~~~~-----~dg~i~iwd~~~~~~~~~~~--------~---------------------------~g~~ 304 (357)
T 3i2n_A 265 VRHLPQNRELFLTAG-----GAGGLHLWKYEYPIQRSKKD--------S---------------------------EGIE 304 (357)
T ss_dssp EEEETTEEEEEEEEE-----TTSEEEEEEEECCSCC--CC--------T---------------------------TSCC
T ss_pred EEECCCCCcEEEEEe-----CCCcEEEeecCCCccccccc--------C---------------------------CCCc
Confidence 99999988 677766 66677777665211100000 0 0000
Q ss_pred EEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEE-EEeCCCcEEEEEecCCcC
Q psy15549 384 VIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLI-ASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 384 l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~-s~s~dg~i~iw~~~~~~~ 446 (621)
. +..+. .+.+..+ .+|...|++++|+|+|++|+ +++.||.|++|++.+.+.
T Consensus 305 ~---~~~~~--------~~~~~~~-~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 305 M---GVAGS--------VSLLQNV-TLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp C---CCCCE--------EEEEEEE-ECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred c---ccccc--------cceeecc-ccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 0 00000 1233344 46899999999999999998 899999999999987653
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=309.28 Aligned_cols=339 Identities=17% Similarity=0.236 Sum_probs=236.3
Q ss_pred ceeeecCCCCeEEEeccc-cccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccce------eeccccc
Q psy15549 6 PEISWHNRDPVLSVDIQL-KQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANV------EFASDLS 78 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~sp-d~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~------~~~~~~~ 78 (621)
..+...|.++|++++|+| +++ +||+|+.||.|+ +|++.++....... .......
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~-----~l~~~~~dg~i~--------------iw~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGR-----YMLSGGSDGVIV--------------LYDLENSSRQSYYTCKAVCSIGRDHPD 96 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCC-----EEEEEETTSCEE--------------EEECCCCSSSSCEEECEEEEECTTCTT
T ss_pred eeeeeccCCcEEEEEEecCCCC-----EEEEEcCCCeEE--------------EEECCCCcccceEeccccccccccccc
Confidence 345566999999999999 998 999999999999 77776654432200 0011124
Q ss_pred cccCcEEEEEEcc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC---CCEEEEEeCCCcE
Q psy15549 79 RHQKAVNVVRFSP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN---GELLASGDDESTI 153 (621)
Q Consensus 79 ~h~~~V~~l~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~---g~~l~s~s~dg~i 153 (621)
+|...|.+++|+| ++.+|++++ |+.|++|++..+ .....+ .+...+.++.|+|. +.+|++++.|+.|
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 168 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL-------QTADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKV 168 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT-------EEEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC-------ccceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeE
Confidence 6999999999999 778888887 888999999876 334333 36788999999984 4599999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCCc-EEEEe-
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST-HLISGSVDNTAIMWDVHKGK-NLGIL- 230 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~-~l~s~~~dg~i~vwd~~~~~-~~~~~- 230 (621)
++||+.++..+ ..+.+|...|.+++|+|++. +|++++.||.|++||++++. .+..+
T Consensus 169 ~~~d~~~~~~~---------------------~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~ 227 (408)
T 4a11_B 169 QLCDLKSGSCS---------------------HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLD 227 (408)
T ss_dssp EEEESSSSCCC---------------------EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECC
T ss_pred EEEeCCCccee---------------------eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccc
Confidence 99999988754 56678999999999999998 58999999999999998765 34443
Q ss_pred --------------ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccC
Q psy15549 231 --------------TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDD 296 (621)
Q Consensus 231 --------------~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (621)
..|...|.+++|+|++++|++++.||.|++||+.+++....+.......
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~----------------- 290 (408)
T 4a11_B 228 QHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNN----------------- 290 (408)
T ss_dssp TTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCC-----------------
T ss_pred ccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceecccccccc-----------------
Confidence 5688899999999999999999999999999999876543332110000
Q ss_pred CcccceeeeeecCCC-CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCC
Q psy15549 297 TMKSFFRRLTFSPDG-QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKP 375 (621)
Q Consensus 297 ~~~~~i~~~~~spdg-~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (621)
.... .+....
T Consensus 291 -----------~~~~~~~~~~~---------------------------------------------------------- 301 (408)
T 4a11_B 291 -----------SKKGLKFTVSC---------------------------------------------------------- 301 (408)
T ss_dssp -----------CSSCCCCEECC----------------------------------------------------------
T ss_pred -----------ccccceeEEec----------------------------------------------------------
Confidence 0000 000000
Q ss_pred CccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCC
Q psy15549 376 LFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSG 455 (621)
Q Consensus 376 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~ 455 (621)
..+..+++++.++.|++||+.+++.+..+ .+|...|++++|+|++++|++++.||.|++|++.+++..........
T Consensus 302 ---~~~~~~~~~~~~~~i~v~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~ 377 (408)
T 4a11_B 302 ---GCSSEFVFVPYGSTIAVYTVYSGEQITML-KGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT 377 (408)
T ss_dssp ---SSSSCEEEEEETTEEEEEETTTCCEEEEE-CCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------
T ss_pred ---CCCceEEEEecCCEEEEEECcCCcceeee-ccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe
Confidence 02355777788999999999999999888 46999999999999999999999999999999999887655443322
Q ss_pred cccccCCCCCCCCcccCCCcccHHHhccc
Q psy15549 456 EESKENDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 456 ~~~~~~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
.. ...........+...++.+++|...
T Consensus 378 ~~--~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 378 KS--QLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp -----------------------------
T ss_pred cc--ccccccceeecccCccCceeecCCc
Confidence 21 1122233345566778899999754
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-38 Score=313.89 Aligned_cols=311 Identities=14% Similarity=0.219 Sum_probs=229.3
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
.+..+|.++|++++|+|+.. +....+++++.++.|+ +|++.++..... +. ......|...|.+
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~-~~~~~~~~~~~~~~v~--------------vw~~~~~~~~~~-~~-~~~~~~~~~~v~~ 74 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSK-EGDPLVFATVGSNRVT--------------LYECHSQGEIRL-LQ-SYVDADADENFYT 74 (366)
T ss_dssp EEECTTCSCEEEEEECTTCC-TTSCEEEEEEETTEEE--------------EEEECGGGCEEE-EE-EEECSCTTCCEEE
T ss_pred EeecCCCCceEEEEEecccC-CCCceEEEECCCCEEE--------------EEEcCCCcEEEe-ee-eccccCCCCcEEE
Confidence 34557999999999999511 0012677777777999 888876654322 00 0011236788999
Q ss_pred EEEccC----CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccC
Q psy15549 87 VRFSPN----GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 87 l~~spd----g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~ 160 (621)
++|+|+ |++|++|+ |+.|++|++..+ ..+..+.+|...|.+++|+| ++++|++++.||.|++||+.+
T Consensus 75 ~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 75 CAWTYDSNTSHPLLAVAGSRGIIRIINPITM-------QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp EEEEECTTTCCEEEEEEETTCEEEEECTTTC-------CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred EEeccCCCCCCCEEEEecCCCEEEEEEchhc-------eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 999999 67899887 888999999876 55677889999999999999 999999999999999999988
Q ss_pred CCCCCCCCCCCcccccccccceeeeeee---cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec------
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKIL---RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT------ 231 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~------ 231 (621)
++.+ ..+ .+|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 148 ~~~~---------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 206 (366)
T 3k26_A 148 DTLV---------------------AIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYN 206 (366)
T ss_dssp TEEE---------------------EEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCC
T ss_pred CeEE---------------------EEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEec
Confidence 7643 333 6899999999999999999999999999999998775543333
Q ss_pred ----------------------cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccc
Q psy15549 232 ----------------------EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKV 289 (621)
Q Consensus 232 ----------------------~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (621)
.|...|.+++|+ +++|++++.|+.|++||+.++........... ...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~---------~~~ 275 (366)
T 3k26_A 207 PNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSE---------SNV 275 (366)
T ss_dssp GGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTC---------CCE
T ss_pred CCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCC---------cch
Confidence 389999999999 78999999999999999987653211100000 000
Q ss_pred ccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecC
Q psy15549 290 VPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELK 369 (621)
Q Consensus 290 ~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (621)
..+.....+...|.+++|+|+
T Consensus 276 ~~~~~~~~~~~~v~~~~~s~~----------------------------------------------------------- 296 (366)
T 3k26_A 276 TILGRFDYSQCDIWYMRFSMD----------------------------------------------------------- 296 (366)
T ss_dssp EEEEEEECSSCCSSCCCCEEC-----------------------------------------------------------
T ss_pred heeccccccCCcEEEEEEcCC-----------------------------------------------------------
Confidence 001111122223344444444
Q ss_pred CCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE----EEeccc--ccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 370 PSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA----FIANIH--YTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 370 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~h--~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
.++.+|++++.||.|++||+.+++... .+ .+| ...|++++|+|+|++|++++.||.|++||+.
T Consensus 297 ---------~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 297 ---------FWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTL-THHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ---------TTSSEEEEECTTSCEEEEECCSSSGGGCEEEEE-CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ---------CCCcEEEEEecCCcEEEEECCCCCCccccceEE-cccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 004555666688999999998876432 44 345 7899999999999999999999999999985
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=297.65 Aligned_cols=291 Identities=19% Similarity=0.264 Sum_probs=243.4
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
...+.+|.++|++++| |++. +|++|+.||.|+ +||+.++... ..+..|...|.
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~-----~l~s~~~dg~v~--------------vw~~~~~~~~-------~~~~~~~~~v~ 63 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDS-----KVASVSRDGTVR--------------LWSKDDQWLG-------TVVYTGQGFLN 63 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETT-----EEEEEETTSEEE--------------EEEESSSEEE-------EEEEECSSCEE
T ss_pred HHHhhCCCCCcEEEEe-cCCC-----EEEEEEcCCcEE--------------EEECCCCEEE-------EEeecCCccEE
Confidence 4456779999999999 9998 999999999999 9998765443 34778999999
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
+++|+|++++|++++ ++.+++|++...... .....+.+|...|.+++| ++++|++++.||.|++|| ...
T Consensus 64 ~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~-- 133 (313)
T 3odt_A 64 SVCYDSEKELLLFGGKDTMINGVPLFATSGE----DPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGS-- 133 (313)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEETTCCTTS----CC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTE--
T ss_pred EEEECCCCCEEEEecCCCeEEEEEeeecCCC----CcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCc--
Confidence 999999999999988 888999998765322 445667889999999999 677999999999999999 222
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEecc-CCcceEEEEE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKGKNLGILTE-HKKFVQGVAW 242 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~l~~ 242 (621)
....+..|...+.+++|+| ++++|++++.||.|++|| ..+....+.. |...+.+++|
T Consensus 134 -------------------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~ 192 (313)
T 3odt_A 134 -------------------LVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAV 192 (313)
T ss_dssp -------------------EEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEE
T ss_pred -------------------EEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEE
Confidence 2356778999999999998 899999999999999999 4566677766 8999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
+|++. |++++.||.|++||+++++.+..+.. +...|.+++|+|++ .|++
T Consensus 193 ~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~-----------------------~~~~i~~~~~~~~~-~l~~------ 241 (313)
T 3odt_A 193 VDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG-----------------------HESFVYCIKLLPNG-DIVS------ 241 (313)
T ss_dssp EETTE-EEEEETTSEEEEEETTTCCEEEEEEC-----------------------CSSCEEEEEECTTS-CEEE------
T ss_pred cCCCe-EEEccCCCeEEEEECCchhhhhhhhc-----------------------CCceEEEEEEecCC-CEEE------
Confidence 99998 88999999999999999887776642 34456888888887 3444
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
++.||.|++||+.+++
T Consensus 242 ----------------------------------------------------------------~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 242 ----------------------------------------------------------------CGEDRTVRIWSKENGS 257 (313)
T ss_dssp ----------------------------------------------------------------EETTSEEEEECTTTCC
T ss_pred ----------------------------------------------------------------EecCCEEEEEECCCCc
Confidence 3478999999999999
Q ss_pred eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccC
Q psy15549 403 PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYV 451 (621)
Q Consensus 403 ~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~ 451 (621)
.+..+. .|...|++++|+|+|+ |++++.||.|++|++.+++......
T Consensus 258 ~~~~~~-~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 258 LKQVIT-LPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp EEEEEE-CSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC---
T ss_pred eeEEEe-ccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhh
Confidence 888884 5888999999999998 6679999999999999887665443
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=320.64 Aligned_cols=226 Identities=16% Similarity=0.162 Sum_probs=178.9
Q ss_pred ecCCCCeEEEeccc-cccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 10 WHNRDPVLSVDIQL-KQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 10 ~~h~~~v~~l~~sp-d~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
.+|.++|++++|+| +++ +||+|+.||.|+ |||+........ ..... ..+|...|.+++
T Consensus 60 ~~h~~~V~~~~~s~~~~~-----~l~s~s~dg~v~--------------vwd~~~~~~~~~-~~~~~-~~~h~~~v~~~~ 118 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETP-----YLITGSDQGVIK--------------IWNLKEIIVGEV-YSSSL-TYDCSSTVTQIT 118 (437)
T ss_dssp TTTTSCEEEEEEECSSSC-----EEEEEETTSEEE--------------EEEHHHHHTTCC-CSCSE-EEECSSCEEEEE
T ss_pred cCCCCceEEEEECCCCCC-----EEEEecCCceEE--------------EeECcccccCcc-cceee-eccCCCCEEEEE
Confidence 67899999999999 998 999999999999 888876221110 00011 125899999999
Q ss_pred EccCCCEEEEEc-CCceEEEEec---cCcccc-ccceecccc--cc--cCCCeEEEE--ECCCCCEEEEEeCCCcEEEEE
Q psy15549 89 FSPNGELLASGD-DVGKEIWYLT---ERESGI-ANVEFASDL--SR--HQKAVNVVR--FSPNGELLASGDDESTIIVWK 157 (621)
Q Consensus 89 ~spdg~~las~~-d~~v~iw~~~---~~~~~~-~~~~~~~~~--~~--h~~~V~~i~--~sp~g~~l~s~s~dg~i~vwd 157 (621)
|+|++.+|++++ |+.|++|++. .+.... .....+..+ .. +...+.++. +++++.+|++|+.|+.|++||
T Consensus 119 ~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 198 (437)
T 3gre_A 119 MIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFD 198 (437)
T ss_dssp ECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEE
T ss_pred EeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 999999999988 8889999995 221000 000111111 12 556777777 668899999999999999999
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecC--CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCC
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRG--HLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT-EHK 234 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~ 234 (621)
+.+++.+ ..+.+ |...|++++|+|++++|++|+.||.|++||+++++++..+. .|.
T Consensus 199 ~~~~~~~---------------------~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 257 (437)
T 3gre_A 199 IRTLERL---------------------QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH 257 (437)
T ss_dssp TTTCCEE---------------------EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC
T ss_pred CCCCeee---------------------EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC
Confidence 9988753 45555 88999999999999999999999999999999999998886 788
Q ss_pred cceEEEEEcC----CCCEEEEEeCCCcEEEEEccCceeeeecccCCC
Q psy15549 235 KFVQGVAWDP----KNQYVATLSSDRSLRTYSIQSKKVISRACRSKL 277 (621)
Q Consensus 235 ~~v~~l~~sp----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 277 (621)
..|.+++|+| ++.+|++++.||.|++||+++++.+..+..+..
T Consensus 258 ~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 304 (437)
T 3gre_A 258 APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDE 304 (437)
T ss_dssp EEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSS
T ss_pred CceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCC
Confidence 8999996664 678999999999999999999998888765543
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=311.23 Aligned_cols=292 Identities=21% Similarity=0.348 Sum_probs=240.1
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
.+..|+||+++ +||+|. |+.|+ |||+.+++.... ..+.+|...|++|+|+|+|+
T Consensus 107 y~~~l~wS~~n------~lAvgl-d~tV~--------------lWd~~tg~~~~~-----~~~~~~~~~V~sv~fspdg~ 160 (420)
T 4gga_A 107 YLNLVDWSSGN------VLAVAL-DNSVY--------------LWSASSGDILQL-----LQMEQPGEYISSVAWIKEGN 160 (420)
T ss_dssp TCBCEEECTTS------EEEEEE-TTEEE--------------EEETTTCCEEEE-----EECCSTTCCEEEEEECTTSS
T ss_pred cceeEEECCCC------EEEEEe-CCEEE--------------EEECCCCCEEEE-----EEecCCCCcEEEEEECCCCC
Confidence 35779999865 888876 89999 999887754322 23567888999999999999
Q ss_pred EEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcc
Q psy15549 95 LLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLD 173 (621)
Q Consensus 95 ~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~ 173 (621)
+||+|+ |+.|+||++..+ ..+..+.+|...|.+++|+ +.+|++|+.|+.+++||.......
T Consensus 161 ~lasgs~Dg~v~iWd~~~~-------~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~--------- 222 (420)
T 4gga_A 161 YLAVGTSSAEVQLWDVQQQ-------KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHH--------- 222 (420)
T ss_dssp EEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE---------
T ss_pred EEEEEECCCeEEEEEcCCC-------cEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccccee---------
Confidence 999998 889999999887 6778889999999998874 679999999999999998776542
Q ss_pred cccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc----EEEEeccCCcceEEEEEcCCC-CE
Q psy15549 174 EENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK----NLGILTEHKKFVQGVAWDPKN-QY 248 (621)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~----~~~~~~~~~~~v~~l~~sp~~-~~ 248 (621)
...+.+|...+..+.|+|+++++++++.|+.+++|+..+++ .+.....|...|.+++|+|++ ..
T Consensus 223 -----------~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~ 291 (420)
T 4gga_A 223 -----------VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 291 (420)
T ss_dssp -----------EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTE
T ss_pred -----------eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccE
Confidence 36678999999999999999999999999999999998765 345667899999999999976 45
Q ss_pred EEEE--eCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCC
Q psy15549 249 VATL--SSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDS 326 (621)
Q Consensus 249 l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~ 326 (621)
++++ +.|+.|++||+.+++....+.. ...+.++.|+|+++.++++++
T Consensus 292 la~~~gs~D~~I~iwd~~t~~~~~~~~~------------------------~~~v~~~~~~~~~~~lv~~sg------- 340 (420)
T 4gga_A 292 LATGGGTSDRHIRIWNVCSGACLSAVDA------------------------HSQVCSILWSPHYKELISGHG------- 340 (420)
T ss_dssp EEEEECTTTCEEEEEETTTTEEEEEEEC------------------------SSCEEEEEEETTTTEEEEEEC-------
T ss_pred EEEEeecCCCEEEEEeCCccccceeecc------------------------ccceeeeeecCCCCeEEEEEe-------
Confidence 5543 4799999999999988776642 234678889998888876552
Q ss_pred CCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEE
Q psy15549 327 TRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAF 406 (621)
Q Consensus 327 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 406 (621)
+.|+.|+|||+.+++++..
T Consensus 341 -------------------------------------------------------------~~d~~I~iwd~~~~~~v~~ 359 (420)
T 4gga_A 341 -------------------------------------------------------------FAQNQLVIWKYPTMAKVAE 359 (420)
T ss_dssp -------------------------------------------------------------TTTCCEEEEETTTCCEEEE
T ss_pred -------------------------------------------------------------cCCCEEEEEECCCCcEEEE
Confidence 2579999999999999998
Q ss_pred EecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCC
Q psy15549 407 IANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 407 ~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
+ .+|...|++++|+|||++||||+.||+|+|||+.+....+....+.
T Consensus 360 l-~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~ 406 (420)
T 4gga_A 360 L-KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREK 406 (420)
T ss_dssp E-CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-------
T ss_pred E-cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhcc
Confidence 8 5799999999999999999999999999999998766555444433
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=312.61 Aligned_cols=340 Identities=18% Similarity=0.293 Sum_probs=259.2
Q ss_pred eeecCCCCe-EEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 8 ISWHNRDPV-LSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 8 ~~~~h~~~v-~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
...+|.+.| .|+.| ++. +|++|+.||.|+ +||+.+++.. ..+.+|.+.|.+
T Consensus 116 ~l~~h~~~v~~~~~~--~~~-----~l~sgs~dg~i~--------------vwd~~~~~~~-------~~~~~h~~~V~~ 167 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDN-----YVITGADDKMIR--------------VYDSINKKFL-------LQLSGHDGGVWA 167 (464)
T ss_dssp EEECCSSSCEEEEEE--ETT-----EEEEEETTSCEE--------------EEETTTTEEE-------EEECCCSSCEEE
T ss_pred EEcCCCCCcEEEEEE--CCC-----EEEEEcCCCcEE--------------EEECCCCcEE-------EEEeCCCcCEEE
Confidence 445676664 66666 555 999999999999 9988776543 347899999999
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEEC--CCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFS--PNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s--p~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
++|+|++ +|++|+ |+.|++|++..+ .....+.+|...|.+++|+ +++.+|++|+.||.|++||+.+...
T Consensus 168 l~~~~~~-~l~s~s~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~ 239 (464)
T 3v7d_B 168 LKYAHGG-ILVSGSTDRTVRVWDIKKG-------CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESS 239 (464)
T ss_dssp EEECSTT-EEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCC
T ss_pred EEEcCCC-EEEEEeCCCCEEEEECCCC-------cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcc
Confidence 9999998 777776 999999999877 6677888999999999998 5778999999999999999998765
Q ss_pred CCCCCCCCcccc--cccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEE
Q psy15549 164 LPEFPSSNLDEE--NVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 164 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 241 (621)
............ ............+.+|...|.++ ++++++|++++.||.|++||+.+++++..+.+|...|.+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~ 317 (464)
T 3v7d_B 240 VPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTI 317 (464)
T ss_dssp C------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred cccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEE
Confidence 433211110000 00001111245678899999887 56788999999999999999999999999999999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccc
Q psy15549 242 WDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCL 321 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~ 321 (621)
|+|++++|++++.||.|++||+++++.+..+.. +...|.+++|+ +.+|++++
T Consensus 318 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-----------------------h~~~v~~~~~~--~~~l~s~s--- 369 (464)
T 3v7d_B 318 YDHERKRCISASMDTTIRIWDLENGELMYTLQG-----------------------HTALVGLLRLS--DKFLVSAA--- 369 (464)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTTEEEEEECC-----------------------CSSCEEEEEEC--SSEEEEEE---
T ss_pred EcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC-----------------------CCCcEEEEEEc--CCEEEEEe---
Confidence 999999999999999999999999998877753 34456889997 57899998
Q ss_pred cCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC
Q psy15549 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA 401 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 401 (621)
.|+.+++|++...... ....+...+..+.+.+ ++.++++++ ||.|++||+.++
T Consensus 370 --~dg~v~vwd~~~~~~~--------~~~~~~~~~~~~~~~~----------------~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 370 --ADGSIRGWDANDYSRK--------FSYHHTNLSAITTFYV----------------SDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp --TTSEEEEEETTTCCEE--------EEEECTTCCCEEEEEE----------------CSSEEEEEE-TTEEEEEETTTC
T ss_pred --CCCcEEEEECCCCcee--------eeecCCCCccEEEEEe----------------CCCEEEEec-CCeEEEEECCCC
Confidence 8999999997632111 0111222233333333 567777776 999999999999
Q ss_pred ceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 402 SPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 402 ~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
+.+......|...|.+++|+ +...+++++.||.+.+|-+
T Consensus 423 ~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 423 KLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp CEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred cEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEEe
Confidence 98887556789999999997 3345555667776666544
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=310.72 Aligned_cols=300 Identities=15% Similarity=0.218 Sum_probs=238.5
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
|.+.|++++|+|+++ +|++|+.||.|+ +|+ .++.. ...+.+|...|.+++|+|
T Consensus 107 ~~~~v~~~~~s~~~~-----~l~~~~~dg~i~--------------i~~-~~~~~-------~~~~~~~~~~v~~~~~~~ 159 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGN-----SIVTGVENGELR--------------LWN-KTGAL-------LNVLNFHRAPIVSVKWNK 159 (425)
T ss_dssp -CBCEEEEEECTTSS-----EEEEEETTSCEE--------------EEE-TTSCE-------EEEECCCCSCEEEEEECT
T ss_pred CCCceEEEEEcCCCC-----EEEEEeCCCeEE--------------EEe-CCCCe-------eeeccCCCccEEEEEECC
Confidence 688999999999998 999999999999 888 22222 334788999999999999
Q ss_pred CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCC---------------eEEEEECCCCCEEEEEeCCCcEEE
Q psy15549 92 NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKA---------------VNVVRFSPNGELLASGDDESTIIV 155 (621)
Q Consensus 92 dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~---------------V~~i~~sp~g~~l~s~s~dg~i~v 155 (621)
++++|++++ ++.+++|++..+ .....+..+... +.+++|+|++ .+++++.||.|++
T Consensus 160 ~~~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~ 231 (425)
T 1r5m_A 160 DGTHIISMDVENVTILWNVISG-------TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFV 231 (425)
T ss_dssp TSSEEEEEETTCCEEEEETTTT-------EEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEE
T ss_pred CCCEEEEEecCCeEEEEECCCC-------cEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEE
Confidence 999999988 889999999876 455556666665 9999999875 6889999999999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCc
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKK 235 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 235 (621)
||+.++... ..+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+..|..
T Consensus 232 ~d~~~~~~~---------------------~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 290 (425)
T 1r5m_A 232 YQITEKTPT---------------------GKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQ 290 (425)
T ss_dssp EETTCSSCS---------------------EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSS
T ss_pred EEcCCCcee---------------------eeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCc
Confidence 999987654 55678999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
.|.+++|+|++ +|++++.|+.|++||+++++.+..+.. +...|.+++|+|++++|+
T Consensus 291 ~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-----------------------~~~~i~~~~~s~~~~~l~ 346 (425)
T 1r5m_A 291 SIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV-----------------------DGVPIFAGRISQDGQKYA 346 (425)
T ss_dssp CEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC-----------------------TTCCEEEEEECTTSSEEE
T ss_pred cEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc-----------------------CCccEEEEEEcCCCCEEE
Confidence 99999999999 999999999999999999888776643 234578999999999998
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
+++ .|+.+++|++....... ..+.+..++.
T Consensus 347 ~~~-----~dg~i~i~~~~~~~~~~------------------------------------------~~~~~~~~~~--- 376 (425)
T 1r5m_A 347 VAF-----MDGQVNVYDLKKLNSKS------------------------------------------RSLYGNRDGI--- 376 (425)
T ss_dssp EEE-----TTSCEEEEECHHHHC---------------------------------------------------------
T ss_pred EEE-----CCCeEEEEECCCCccce------------------------------------------eeeecccccc---
Confidence 887 67777777764211000 0000111111
Q ss_pred EeCCCCceeEEEeccccc--ceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 396 YDTQHASPFAFIANIHYT--KLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~--~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
+.......+..+ .+|.. .|++++|+|++++|++++.||.|++|++.
T Consensus 377 ~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 377 LNPLPIPLYASY-QSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp --CEECCEEEEE-CCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cCcccchhhhhh-cCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 111122255555 45755 99999999999999999999999999985
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=306.39 Aligned_cols=295 Identities=19% Similarity=0.291 Sum_probs=235.7
Q ss_pred cCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEc
Q psy15549 11 HNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 90 (621)
Q Consensus 11 ~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 90 (621)
.|.+.+++.++++++. .+++++.||.|+ +|++.++..... ....|...|.+++|+
T Consensus 89 ~~~~~~~~~~~~~s~~-----~l~~~~~d~~v~--------------lw~~~~~~~~~~------~~~~~~~~v~~v~~s 143 (401)
T 4aez_A 89 GIIDDYYLNLLDWSNL-----NVVAVALERNVY--------------VWNADSGSVSAL------AETDESTYVASVKWS 143 (401)
T ss_dssp TCCCCTTCBCEEECTT-----SEEEEEETTEEE--------------EEETTTCCEEEE------EECCTTCCEEEEEEC
T ss_pred CCcCCceEEEEeecCC-----CEEEEECCCeEE--------------EeeCCCCcEeEe------eecCCCCCEEEEEEC
Confidence 3444444433443344 678888999999 888877654322 112388999999999
Q ss_pred cCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 91 PNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 91 pdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
|++++|++|+ ++.|++|++..+ .....+.+|...|.+++| ++++|++++.||.|++||+.....
T Consensus 144 ~~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~------ 208 (401)
T 4aez_A 144 HDGSFLSVGLGNGLVDIYDVESQ-------TKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANH------ 208 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC------
T ss_pred CCCCEEEEECCCCeEEEEECcCC-------eEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcc------
Confidence 9999999988 888999999876 566778899999999999 567999999999999999985443
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC-E
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ-Y 248 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~-~ 248 (621)
....+.+|...|.+++|+|++++|++|+.||.|++||+.+++.+..+..|...|.+++|+|++. +
T Consensus 209 --------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l 274 (401)
T 4aez_A 209 --------------QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNL 274 (401)
T ss_dssp --------------EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTE
T ss_pred --------------eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCE
Confidence 2366788999999999999999999999999999999999999999999999999999999774 5
Q ss_pred EEEEe--CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCC
Q psy15549 249 VATLS--SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDS 326 (621)
Q Consensus 249 l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~ 326 (621)
+++++ .|+.|++||+.+++.+..+. +...|.+++|+|++++++++++
T Consensus 275 l~~~~gs~d~~i~i~d~~~~~~~~~~~------------------------~~~~v~~~~~s~~~~~l~~~~g------- 323 (401)
T 4aez_A 275 LATGGGTMDKQIHFWNAATGARVNTVD------------------------AGSQVTSLIWSPHSKEIMSTHG------- 323 (401)
T ss_dssp EEEECCTTTCEEEEEETTTCCEEEEEE------------------------CSSCEEEEEECSSSSEEEEEEC-------
T ss_pred EEEecCCCCCEEEEEECCCCCEEEEEe------------------------CCCcEEEEEECCCCCeEEEEee-------
Confidence 55654 69999999999988777663 2335789999999998887431
Q ss_pred CCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEE
Q psy15549 327 TRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAF 406 (621)
Q Consensus 327 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 406 (621)
+.||.|++||+.++.....
T Consensus 324 -------------------------------------------------------------~~dg~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 324 -------------------------------------------------------------FPDNNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp -------------------------------------------------------------TTTCEEEEEEEETTEEEEE
T ss_pred -------------------------------------------------------------cCCCcEEEEecCCccceeE
Confidence 2578899999888655444
Q ss_pred E-ecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccC
Q psy15549 407 I-ANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYV 451 (621)
Q Consensus 407 ~-~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~ 451 (621)
. ..+|...|++++|+|+|++|++++.||.|++|++.+++......
T Consensus 343 ~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 343 VDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp EEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred EEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 2 24699999999999999999999999999999999988765543
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=319.10 Aligned_cols=342 Identities=14% Similarity=0.213 Sum_probs=247.8
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
.....|...|++++|+|+++ +|++|+.||.|+ +|++....... .....+.+|...|.+
T Consensus 61 ~~~~~~~~~v~~~~~s~~~~-----~l~~~~~dg~v~--------------vw~~~~~~~~~---~~~~~~~~h~~~v~~ 118 (416)
T 2pm9_A 61 IASLQVDSKFNDLDWSHNNK-----IIAGALDNGSLE--------------LYSTNEANNAI---NSMARFSNHSSSVKT 118 (416)
T ss_dssp SCCCCCSSCEEEEEECSSSS-----CEEEEESSSCEE--------------EECCSSTTSCC---CEEEECCCSSSCCCE
T ss_pred EEEEecCCceEEEEECCCCC-----eEEEEccCCeEE--------------Eeecccccccc---cchhhccCCccceEE
Confidence 33456888999999999998 999999999999 88887632111 124457899999999
Q ss_pred EEEccC-CCEEEEEc-CCceEEEEeccCcccccc--ceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEEEEEccCC
Q psy15549 87 VRFSPN-GELLASGD-DVGKEIWYLTERESGIAN--VEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 87 l~~spd-g~~las~~-d~~v~iw~~~~~~~~~~~--~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~vwd~~~~ 161 (621)
++|+|+ +++|++++ |+.|++|++......... ......+..|...|.+++|+|+ +.+|++++.||.|++||+.++
T Consensus 119 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 198 (416)
T 2pm9_A 119 VKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK 198 (416)
T ss_dssp EEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT
T ss_pred EEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC
Confidence 999998 89999988 889999999876411100 0122345679999999999998 789999999999999999987
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCC---eEEEEECCCC-cEEEEec-cCCc
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDN---TAIMWDVHKG-KNLGILT-EHKK 235 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg---~i~vwd~~~~-~~~~~~~-~~~~ 235 (621)
+.+..+.. .....+|...|.+++|+|++ .+|++++.|+ .|++||++++ ..+..+. +|..
T Consensus 199 ~~~~~~~~---------------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~ 263 (416)
T 2pm9_A 199 KEVIHLSY---------------TSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQK 263 (416)
T ss_dssp EEEEEECC---------------CCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSS
T ss_pred CcceEEec---------------cccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccC
Confidence 65321100 00012237899999999997 6899999998 9999999986 6677777 8999
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC-Ce
Q psy15549 236 FVQGVAWDP-KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG-QL 313 (621)
Q Consensus 236 ~v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg-~~ 313 (621)
.|.+++|+| ++++|++++.||.|++||+++++.+..+..+ ...|.+++|+|++ .+
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-----------------------~~~v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR-----------------------GNWCFKTKFAPEAPDL 320 (416)
T ss_dssp CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS-----------------------SSCCCCEEECTTCTTE
T ss_pred ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC-----------------------CCceEEEEECCCCCCE
Confidence 999999999 9999999999999999999999887776533 3456899999999 78
Q ss_pred EEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcE
Q psy15549 314 LIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNI 393 (621)
Q Consensus 314 l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 393 (621)
|++++ .|+.+++|++........... . .... ......+...+..++..+..+.
T Consensus 321 l~s~~-----~d~~i~iw~~~~~~~~~~~~~----~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~- 373 (416)
T 2pm9_A 321 FACAS-----FDNKIEVQTLQNLTNTLDEQE----T-ETKQ----------------QESETDFWNNVSREESKEKPSV- 373 (416)
T ss_dssp EEECC-----SSSEEEEEESCCCCCSSCC-------------------------------------------CCSCCCS-
T ss_pred EEEEe-----cCCcEEEEEccCCCCCccccc----c-cccc----------------cCCccccccccccccccccccc-
Confidence 99888 899999999864321111000 0 0000 0000001111111111111111
Q ss_pred EEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 394 LLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 394 ~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
+.+ .....|...+++++|+|||++|++++.||.|+||++.+.
T Consensus 374 --~~~-------~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 374 --FHL-------QAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp --SCC-------CCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred --ccc-------cCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 111 111347778999999999999999999999999998864
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=288.22 Aligned_cols=253 Identities=17% Similarity=0.273 Sum_probs=204.0
Q ss_pred ccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC--CCCEEEEEeCCCc
Q psy15549 76 DLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--NGELLASGDDEST 152 (621)
Q Consensus 76 ~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp--~g~~l~s~s~dg~ 152 (621)
.+.+|.+.|++++|+|+|++||+|+ |+.|+||++..... .....+.+|.+.|++++|++ ++++|++|+.|++
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~-----~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH-----KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB-----CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc-----EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 4789999999999999999999998 88999999975321 45677889999999999986 4899999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEECCCCc--EEE
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT--STHLISGSVDNTAIMWDVHKGK--NLG 228 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd--~~~l~s~~~dg~i~vwd~~~~~--~~~ 228 (621)
|++||+.++... ....+.+|...|.+++|+|+ +.+|++++.|+.|++||++++. ...
T Consensus 79 v~iWd~~~~~~~-------------------~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~ 139 (297)
T 2pm7_B 79 VMIWKEENGRWS-------------------QIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPI 139 (297)
T ss_dssp EEEEEBSSSCBC-------------------CCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCE
T ss_pred EEEEEcCCCceE-------------------EEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeee
Confidence 999999876421 12456789999999999997 8899999999999999998763 245
Q ss_pred EeccCCcceEEEEEcCC-------------CCEEEEEeCCCcEEEEEccCce----eeeecccCCCCCCCcccccccccc
Q psy15549 229 ILTEHKKFVQGVAWDPK-------------NQYVATLSSDRSLRTYSIQSKK----VISRACRSKLPVDSSHELFDKVVP 291 (621)
Q Consensus 229 ~~~~~~~~v~~l~~sp~-------------~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 291 (621)
.+.+|...|.+++|+|+ +++|++|+.|+.|++||++++. ....+
T Consensus 140 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l------------------- 200 (297)
T 2pm7_B 140 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL------------------- 200 (297)
T ss_dssp EEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE-------------------
T ss_pred eeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe-------------------
Confidence 67789999999999997 5799999999999999998754 22222
Q ss_pred ccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCC
Q psy15549 292 LFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPS 371 (621)
Q Consensus 292 ~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (621)
..|...|.+++|+|++.
T Consensus 201 ----~~H~~~V~~v~~sp~~~----------------------------------------------------------- 217 (297)
T 2pm7_B 201 ----EGHSDWVRDVAWSPTVL----------------------------------------------------------- 217 (297)
T ss_dssp ----CCCSSCEEEEEECCCCS-----------------------------------------------------------
T ss_pred ----cCCCCceEEEEECCCCC-----------------------------------------------------------
Confidence 24455678888888751
Q ss_pred CCCCCccCCCcEEEEEEcCCcEEEEeCCCCc--eeEEEe--cccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 372 DDKPLFKLPYRIVIAVATENNILLYDTQHAS--PFAFIA--NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 372 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~--~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
.+.+|++++.|++|+|||+.... ...... ..|...|.+++|+|+|++||+++.||.|+||+..
T Consensus 218 --------~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 218 --------LRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp --------SSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred --------CceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 01345555678888888877643 112222 3577899999999999999999999999999986
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-36 Score=296.41 Aligned_cols=295 Identities=17% Similarity=0.267 Sum_probs=245.4
Q ss_pred eeeccccccccCcEEEEEEccC-CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe
Q psy15549 71 VEFASDLSRHQKAVNVVRFSPN-GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD 148 (621)
Q Consensus 71 ~~~~~~~~~h~~~V~~l~~spd-g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s 148 (621)
+.+..+|.||.+.|++|+|+|+ +++|++|+ |+.|+||++...... .......+.+|...|.+++|+|++++|++++
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~--~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC--SEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc--cceeeEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence 3455679999999999999997 68999988 899999999875422 1134567889999999999999999999999
Q ss_pred CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE-
Q psy15549 149 DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL- 227 (621)
Q Consensus 149 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~- 227 (621)
.|+.|++|+....... .....+...+..+.+++++.+|++++.|+.+++||+......
T Consensus 106 ~d~~i~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~ 164 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTT---------------------RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT 164 (340)
T ss_dssp TTSEEEEEETTTTEEE---------------------EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE
T ss_pred ccccceEEeeccccee---------------------eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEE
Confidence 9999999998877642 455678888999999999999999999999999999766543
Q ss_pred EEeccCCcceEEEEEcCCC--CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeee
Q psy15549 228 GILTEHKKFVQGVAWDPKN--QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL 305 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 305 (621)
....+|...+..++|++++ .++++++.|+.|++||+++++.+..+.. +...|.++
T Consensus 165 ~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~-----------------------h~~~v~~~ 221 (340)
T 4aow_A 165 VQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG-----------------------HTGYLNTV 221 (340)
T ss_dssp ECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC-----------------------CSSCEEEE
T ss_pred EEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC-----------------------CCCcEEEE
Confidence 3456789999999999865 5788999999999999999988776643 34567899
Q ss_pred eecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEE
Q psy15549 306 TFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVI 385 (621)
Q Consensus 306 ~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 385 (621)
+|+|++++|++++
T Consensus 222 ~~s~~~~~l~s~s------------------------------------------------------------------- 234 (340)
T 4aow_A 222 TVSPDGSLCASGG------------------------------------------------------------------- 234 (340)
T ss_dssp EECTTSSEEEEEE-------------------------------------------------------------------
T ss_pred EECCCCCEEEEEe-------------------------------------------------------------------
Confidence 9999888777654
Q ss_pred EEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCccc---------CCCCCc
Q psy15549 386 AVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY---------VPPSGE 456 (621)
Q Consensus 386 ~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~---------~~~~~~ 456 (621)
.|+.|++||+.+.+.+..+. +...|.+++|+|++. +++++.|+.|++||+.++.+...+ ..+...
T Consensus 235 ---~Dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~ 308 (340)
T 4aow_A 235 ---KDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQ 308 (340)
T ss_dssp ---TTCEEEEEETTTTEEEEEEE--CSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCC
T ss_pred ---CCCeEEEEEeccCceeeeec--CCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCC
Confidence 78899999999998888774 456899999999875 556667999999999877654443 346677
Q ss_pred ccccCCCCCCCCcccCCCcccHHHhccc
Q psy15549 457 ESKENDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 457 ~~~~~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
+..+.|++++..+++++.|+.|++|+++
T Consensus 309 v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 309 CTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 8889999999999999999999999965
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-37 Score=308.32 Aligned_cols=305 Identities=12% Similarity=0.087 Sum_probs=238.6
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
-..+|.+|+|+|||+ ++|+++.|++|+ |.... ..+.+|...|.+++|+|
T Consensus 14 ~~~~v~sv~~SpDG~-----~iASas~D~TV~----------------d~~~~----------~~l~gh~~~v~~V~FsP 62 (588)
T 2j04_A 14 FEDWKNNLTWARDGT-----LYLTTFPDISIG----------------QPKYA----------KDINCNSKNLFHVKEFP 62 (588)
T ss_dssp CSSSSCCEEECTTSC-----EEEECSSSEEEE----------------EECCC----------SCCSSBGGGTEEEEEEC
T ss_pred hhccEEEEEECCCCC-----EEEEEcCCceee----------------ccccc----------ceecCCCccEEEEEECC
Confidence 356899999999999 999999999996 22211 23578999999999999
Q ss_pred CCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 92 NGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 92 dg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
+| .++.+.+|+.... ....+ .|...|.+++|||+|++||+++.||.|++||... .
T Consensus 63 dg------~~~~~~~~~~~~~--------~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~-------- 117 (588)
T 2j04_A 63 LE------FENKLDFELAQQN--------GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--M-------- 117 (588)
T ss_dssp CC------CCCTTTTSCCCSS--------CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--E--------
T ss_pred CC------CcceEEEEeCCCc--------eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--e--------
Confidence 99 4555555554322 12222 4578999999999999999999999999999543 1
Q ss_pred cccccccccceeeeeeecCCCC-----CeEEEEECCCCCEEEEEeCCCeEEEEECCCCc-------EEEEe----ccCCc
Q psy15549 172 LDEENVNKEHWIVTKILRGHLE-----DVYDISWSPTSTHLISGSVDNTAIMWDVHKGK-------NLGIL----TEHKK 235 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~-----~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~-------~~~~~----~~~~~ 235 (621)
...+. |.. .|.+++|||||++|++|+.||+|++||+.++. .+.++ .+|..
T Consensus 118 -------------l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~ 183 (588)
T 2j04_A 118 -------------LTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKD 183 (588)
T ss_dssp -------------EEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCC
T ss_pred -------------eeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccc
Confidence 13344 544 59999999999999999999999999999875 35666 66778
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceee---eecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVI---SRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 312 (621)
.|.+++|+|+| +++++.|+.|++||+.++... ..+. ..+...|.+++|+ |+
T Consensus 184 ~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~----------------------~~h~~~V~svaFs--g~ 237 (588)
T 2j04_A 184 WVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ----------------------NASRRKITDLKIV--DY 237 (588)
T ss_dssp CEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE----------------------CCCSSCCCCEEEE--TT
T ss_pred cEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec----------------------ccccCcEEEEEEE--CC
Confidence 99999999999 888999999999999876632 2221 1223456788887 45
Q ss_pred eEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCc
Q psy15549 313 LLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENN 392 (621)
Q Consensus 313 ~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 392 (621)
.|++++ ++.
T Consensus 238 ~LASa~-----------------------------------------------------------------------~~t 246 (588)
T 2j04_A 238 KVVLTC-----------------------------------------------------------------------PGY 246 (588)
T ss_dssp EEEEEC-----------------------------------------------------------------------SSE
T ss_pred EEEEEe-----------------------------------------------------------------------CCe
Confidence 555432 589
Q ss_pred EEEEeCCCCceeEEEecccccceEEEEE--cCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcc
Q psy15549 393 ILLYDTQHASPFAFIANIHYTKLTDITW--SSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVR 470 (621)
Q Consensus 393 i~iwd~~~~~~~~~~~~~h~~~v~~~~~--spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (621)
|++||+.+++...... +|...|.+++| +||++.|++++.||+ ++|.++ ...+++++..++
T Consensus 247 IkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d----------------~~~~spd~~l~a 308 (588)
T 2j04_A 247 VHKIDLKNYSISSLKT-GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED----------------ELHVTADNIIAP 308 (588)
T ss_dssp EEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS----------------SEEEECCCSSHH
T ss_pred EEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec----------------cEEECCCceEEE
Confidence 9999999887744442 69999999999 999999999999999 999988 144888988888
Q ss_pred cCCCcccHHHhcccCcccccccc-----CCCCCCCccC
Q psy15549 471 SEDKPRSAEQAKGEGKVLGEKQT-----GNKVSPTDKS 503 (621)
Q Consensus 471 s~~~~~~~~~w~~~~~~~~~~~~-----~~~~s~~~~~ 503 (621)
+. ++.+++|+..+..+..+.+ +..++|+++.
T Consensus 309 ~~--d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~ 344 (588)
T 2j04_A 309 YL--EKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYS 344 (588)
T ss_dssp HH--HHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSE
T ss_pred Ec--CCEEEEEECCCCceeeeccceEEEEEEECCCCCE
Confidence 75 9999999988776665554 5778888854
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=294.05 Aligned_cols=325 Identities=18% Similarity=0.260 Sum_probs=234.2
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
..+..+|.++|++++|+|+++ +||+|+.||.|+ +|++..+... ......+.+|...|.
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~-----~l~~~~~dg~i~--------------iw~~~~~~~~---~~~~~~~~~~~~~v~ 61 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGR-----HVATCSSDQHIK--------------VFKLDKDTSN---WELSDSWRAHDSSIV 61 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSS-----EEEEEETTSEEE--------------EEEECSSSCC---EEEEEEEECCSSCEE
T ss_pred cccCcccccceeEEEEcCCCC-----EEEEeeCCCeEE--------------EEECCCCCCc---ceecceeccCCCcEE
Confidence 356778999999999999998 999999999999 8988865432 234556789999999
Q ss_pred EEEEcc--CCCEEEEEc-CCceEEEEeccCccc--cccceecccccccCCCeEEEEECCC--CCEEEEEeCCCcEEEEEc
Q psy15549 86 VVRFSP--NGELLASGD-DVGKEIWYLTERESG--IANVEFASDLSRHQKAVNVVRFSPN--GELLASGDDESTIIVWKQ 158 (621)
Q Consensus 86 ~l~~sp--dg~~las~~-d~~v~iw~~~~~~~~--~~~~~~~~~~~~h~~~V~~i~~sp~--g~~l~s~s~dg~i~vwd~ 158 (621)
+++|+| ++++|++++ |+.|++|++..+... ...+.....+..|...|.+++|+|+ +++|++++.||.|++||+
T Consensus 62 ~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~ 141 (351)
T 3f3f_A 62 AIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDA 141 (351)
T ss_dssp EEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEEC
T ss_pred EEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecC
Confidence 999999 699999988 888999999876321 1122446667789999999999999 999999999999999999
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC---CCEEEEEeCCCeEEEEECCCCcE--EEEeccC
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT---STHLISGSVDNTAIMWDVHKGKN--LGILTEH 233 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd---~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~ 233 (621)
.+++.+..+.... ...........|...+.+++|+|+ +.+|++++.++.+.+|+...+.. +..+.+|
T Consensus 142 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h 213 (351)
T 3f3f_A 142 LEPSDLRSWTLTS--------EMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGH 213 (351)
T ss_dssp SSTTCTTCCEEEE--------EEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCC
T ss_pred CChHHhccccccc--------cccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCC
Confidence 9988765441100 000001122368889999999997 89999999999998888877765 6777889
Q ss_pred CcceEEEEEcCCC----CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC
Q psy15549 234 KKFVQGVAWDPKN----QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309 (621)
Q Consensus 234 ~~~v~~l~~sp~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 309 (621)
...|.+++|+|++ ++|++++.||.|++||++.+......... ........+++
T Consensus 214 ~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----------------------~~~~~~~~~~~ 270 (351)
T 3f3f_A 214 KSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEES-----------------------LTNSNMFDNSA 270 (351)
T ss_dssp CSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------------------
T ss_pred CcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCc-----------------------ccceeccCCCc
Confidence 9999999999998 89999999999999999875433221100 00011122222
Q ss_pred CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc
Q psy15549 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT 389 (621)
Q Consensus 310 dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (621)
....+..+. ..+..
T Consensus 271 ~~~~~~~~~------------------------------------------------------------------~~~~~ 284 (351)
T 3f3f_A 271 DVDMDAQGR------------------------------------------------------------------SDSNT 284 (351)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccc------------------------------------------------------------------ccccc
Confidence 222211111 11123
Q ss_pred CCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCccc
Q psy15549 390 ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY 450 (621)
Q Consensus 390 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~ 450 (621)
...+.+|+....+.+..+ .+|...|++++|+|+|++|++++.||.|++|++.++.....+
T Consensus 285 ~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 285 EEKAELQSNLQVELLSEH-DDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ------CCSEEEEEEEEE-CTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred ceeeeecccccccEEEEE-ecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 345566666666666666 469999999999999999999999999999999987655443
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-36 Score=299.66 Aligned_cols=288 Identities=15% Similarity=0.202 Sum_probs=252.2
Q ss_pred cccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcE
Q psy15549 75 SDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTI 153 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i 153 (621)
..+.+|.+.|++++|+|++++|++++ |+.|++|++..+ .....+.+|...|.+++|+|++++|++++.||.|
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 98 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG-------ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSI 98 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc-------hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 45889999999999999999999988 888999999876 6677788999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEECCCCc---
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD-----NTAIMWDVHKGK--- 225 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d-----g~i~vwd~~~~~--- 225 (621)
++||+.+++.+ ..+. +...|.+++|+|++++|++++.+ +.|++||+..+.
T Consensus 99 ~iwd~~~~~~~---------------------~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~ 156 (369)
T 3zwl_B 99 KLWDVSNGQCV---------------------ATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATH 156 (369)
T ss_dssp EEEETTTCCEE---------------------EEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTC
T ss_pred EEEECCCCcEE---------------------EEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccce
Confidence 99999988753 3333 88899999999999999999998 999999997653
Q ss_pred --------EEEEeccCCc--ceEEEEEcCCCCEEEEEeCCCcEEEEEccC-ceeeeecccCCCCCCCccccccccccccc
Q psy15549 226 --------NLGILTEHKK--FVQGVAWDPKNQYVATLSSDRSLRTYSIQS-KKVISRACRSKLPVDSSHELFDKVVPLFH 294 (621)
Q Consensus 226 --------~~~~~~~~~~--~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (621)
.+..+..|.. .+.+++|+|++++|++++.||.|++||+++ ++.+..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------------- 216 (369)
T 3zwl_B 157 ELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL-------------------- 216 (369)
T ss_dssp CEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC--------------------
T ss_pred eecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec--------------------
Confidence 3344455655 899999999999999999999999999988 566655532
Q ss_pred cCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCC
Q psy15549 295 DDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDK 374 (621)
Q Consensus 295 ~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (621)
+...|.+++|+|++++|++++
T Consensus 217 ---~~~~v~~~~~~~~~~~l~~~~-------------------------------------------------------- 237 (369)
T 3zwl_B 217 ---HEKSISDMQFSPDLTYFITSS-------------------------------------------------------- 237 (369)
T ss_dssp ---CSSCEEEEEECTTSSEEEEEE--------------------------------------------------------
T ss_pred ---CCCceeEEEECCCCCEEEEec--------------------------------------------------------
Confidence 344578899998887776654
Q ss_pred CCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCC--------------cEEEEE
Q psy15549 375 PLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDG--------------YCSIIS 440 (621)
Q Consensus 375 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg--------------~i~iw~ 440 (621)
.|+.|++||+.+++.+..+. +...+.+++|+|++++|++++.++ .+++|+
T Consensus 238 --------------~d~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d 301 (369)
T 3zwl_B 238 --------------RDTNSFLVDVSTLQVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYH 301 (369)
T ss_dssp --------------TTSEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEE
T ss_pred --------------CCceEEEEECCCCceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEe
Confidence 68899999999999888875 778999999999999999999988 899999
Q ss_pred ecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhcccCc
Q psy15549 441 FGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~~ 486 (621)
+.+++....+..|...+..+.+++++..+++++.|+.+++|+++..
T Consensus 302 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 302 KIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred cCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 9999999999999999999999999999999999999999997765
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=311.01 Aligned_cols=305 Identities=15% Similarity=0.100 Sum_probs=250.1
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
..+++++|+|+|++|++++ |+.+++|++... .....+..| ..+....|++++++|++|+.||.|++||+.+
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 128 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIR-------DGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNF 128 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSE-------ETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTS
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEeccc-------ceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCC
Confidence 3455899999999999988 889999999876 444455555 4455567899999999999999999999987
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 240 (621)
+.. ...+.+|...|++++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.++
T Consensus 129 ~~~---------------------~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 187 (420)
T 3vl1_A 129 NLQ---------------------REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDI 187 (420)
T ss_dssp CEE---------------------EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEE
T ss_pred cce---------------------eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEE
Confidence 754 25567899999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 241 AWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 241 ~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
+|+|++++|++++.||.|++||+++++.+..+..+. .+...+.+++|.+++...+...
T Consensus 188 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~~~~~~-- 245 (420)
T 3vl1_A 188 AIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKE--------------------NPHDGVNSIALFVGTDRQLHEI-- 245 (420)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTT--------------------BTTCCEEEEEEEECCCSSCGGG--
T ss_pred EEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCC--------------------CCCCCccEEEEecCCcceeeec--
Confidence 999999999999999999999999998887775332 2334567777776654332211
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
+...+.++.|+ +++.++++++.||.|++||+.+
T Consensus 246 -------------------------------~~~~v~~~~~s----------------~~~~~l~~~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 246 -------------------------------STSKKNNLEFG----------------TYGKYVIAGHVSGVITVHNVFS 278 (420)
T ss_dssp -------------------------------CCCCCCTTCSS----------------CTTEEEEEEETTSCEEEEETTT
T ss_pred -------------------------------ccCcccceEEc----------------CCCCEEEEEcCCCeEEEEECCC
Confidence 11223333444 3778999999999999999999
Q ss_pred CceeEEEecccccceEEEEEcCCCC-eEEEEeCCCcEEEEEecCCcC-CcccCC-CCCcccccCCCCCCCCcccCCCccc
Q psy15549 401 ASPFAFIANIHYTKLTDITWSSDGK-VLIASSTDGYCSIISFGDNEI-GIPYVP-PSGEESKENDPTKGEPVRSEDKPRS 477 (621)
Q Consensus 401 ~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~s~dg~i~iw~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~ 477 (621)
++.+..+...|...|++++|+|+++ +|++++.||.|++||+.+++. ...+.. +...+..+ +.+++..+++++.|+.
T Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~ 357 (420)
T 3vl1_A 279 KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNV-YFAAGALFVSSGFDTS 357 (420)
T ss_dssp CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE-EEETTEEEEEETTTEE
T ss_pred CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE-EeCCCCEEEEecCCcc
Confidence 9988888777889999999999999 999999999999999998754 566665 55555555 4457789999999999
Q ss_pred HHHhcccC
Q psy15549 478 AEQAKGEG 485 (621)
Q Consensus 478 ~~~w~~~~ 485 (621)
+++|++..
T Consensus 358 v~iw~~~~ 365 (420)
T 3vl1_A 358 IKLDIISD 365 (420)
T ss_dssp EEEEEECC
T ss_pred EEEEeccC
Confidence 99999765
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=286.54 Aligned_cols=255 Identities=21% Similarity=0.354 Sum_probs=210.2
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
.+..+|.++|++++|+|+|+ +||+|+.|+.|+ ||++..... +....+.+|.+.|.+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~-----~las~s~D~~v~--------------iw~~~~~~~-----~~~~~l~gH~~~V~~ 58 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGK-----RMATCSSDKTIK--------------IFEVEGETH-----KLIDTLTGHEGPVWR 58 (297)
T ss_dssp EECCSCSSCEEEEEECTTSS-----EEEEEETTSCEE--------------EEEBCSSCB-----CCCEEECCCSSCEEE
T ss_pred eeccCCcCceEEEEECCCCC-----EEEEEeCCCEEE--------------EEecCCCCc-----EEEEEEccccCCeEE
Confidence 35567999999999999999 999999999999 888864321 123468899999999
Q ss_pred EEEcc--CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC--CCEEEEEeCCCcEEEEEccCC
Q psy15549 87 VRFSP--NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN--GELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 87 l~~sp--dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~--g~~l~s~s~dg~i~vwd~~~~ 161 (621)
++|++ ++++|++|+ |+.|++|++..+.. .....+.+|...|.+++|+|+ +.+|++++.|+.|++||+.+.
T Consensus 59 v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~-----~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 59 VDWAHPKFGTILASCSYDGKVMIWKEENGRW-----SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp EEECCGGGCSEEEEEETTTEEEEEEBSSSCB-----CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred EEecCCCcCCEEEEEcCCCEEEEEEcCCCce-----EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 99986 489999988 88999999986521 334556789999999999997 889999999999999999876
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-------------CCEEEEEeCCCeEEEEECCCCc---
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-------------STHLISGSVDNTAIMWDVHKGK--- 225 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-------------~~~l~s~~~dg~i~vwd~~~~~--- 225 (621)
.... ...+.+|...|.+++|+|+ +++|++|+.|+.|++||++++.
T Consensus 134 ~~~~-------------------~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~ 194 (297)
T 2pm7_B 134 GTTS-------------------PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY 194 (297)
T ss_dssp SCBC-------------------CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEE
T ss_pred Ccee-------------------eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceE
Confidence 4211 1456789999999999997 5799999999999999998876
Q ss_pred -EEEEeccCCcceEEEEEcCCC---CEEEEEeCCCcEEEEEccCcee--eeecccCCCCCCCccccccccccccccCCcc
Q psy15549 226 -NLGILTEHKKFVQGVAWDPKN---QYVATLSSDRSLRTYSIQSKKV--ISRACRSKLPVDSSHELFDKVVPLFHDDTMK 299 (621)
Q Consensus 226 -~~~~~~~~~~~v~~l~~sp~~---~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (621)
....+.+|...|.+++|+|++ .+|++++.|++|++||++.... .... .....+.
T Consensus 195 ~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~--------------------~~~~~~~ 254 (297)
T 2pm7_B 195 VLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTL--------------------LKEEKFP 254 (297)
T ss_dssp EEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEE--------------------SSSSCCS
T ss_pred EEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceee--------------------eecccCC
Confidence 567788999999999999985 8999999999999999976421 1111 0112345
Q ss_pred cceeeeeecCCCCeEEeccccccCCCCCCcceeee
Q psy15549 300 SFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 300 ~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
..|.+++|+|+|++|++++ .|+.+++|+..
T Consensus 255 ~~v~~~~~s~~g~~las~~-----~D~~v~lw~~~ 284 (297)
T 2pm7_B 255 DVLWRASWSLSGNVLALSG-----GDNKVTLWKEN 284 (297)
T ss_dssp SCEEEEEECSSSCCEEEEE-----TTSCEEEEEEC
T ss_pred CcEEEEEECCCCCEEEEEc-----CCCcEEEEEEC
Confidence 6789999999999999999 89999999864
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-37 Score=306.86 Aligned_cols=315 Identities=14% Similarity=0.159 Sum_probs=252.1
Q ss_pred cccccCcEEEEEEccC---CC--EEEEEcCCceEEEEeccCccccccceecccc--cccCCCeEEEEECCC----CCEEE
Q psy15549 77 LSRHQKAVNVVRFSPN---GE--LLASGDDVGKEIWYLTERESGIANVEFASDL--SRHQKAVNVVRFSPN----GELLA 145 (621)
Q Consensus 77 ~~~h~~~V~~l~~spd---g~--~las~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~i~~sp~----g~~l~ 145 (621)
..+|.+.|++++|+|+ +. ++++++++.|++|++..+... ..+..+ ..|...|.+++|+|+ +.+|+
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~ 89 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI----RLLQSYVDADADENFYTCAWTYDSNTSHPLLA 89 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE----EEEEEEECSCTTCCEEEEEEEECTTTCCEEEE
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE----EeeeeccccCCCCcEEEEEeccCCCCCCCEEE
Confidence 4589999999999984 33 666666889999999866311 111111 236688999999998 67999
Q ss_pred EEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCC
Q psy15549 146 SGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKG 224 (621)
Q Consensus 146 s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~ 224 (621)
+|+.||.|++||+.+++.+ ..+.+|...|.+++|+| ++++|++++.||.|++||+.++
T Consensus 90 ~~~~dg~i~v~d~~~~~~~---------------------~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 90 VAGSRGIIRIINPITMQCI---------------------KHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp EEETTCEEEEECTTTCCEE---------------------EEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT
T ss_pred EecCCCEEEEEEchhceEe---------------------eeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC
Confidence 9999999999999887643 56778999999999999 9999999999999999999999
Q ss_pred cEEEEe---ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccc
Q psy15549 225 KNLGIL---TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSF 301 (621)
Q Consensus 225 ~~~~~~---~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (621)
+.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------------------------- 200 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIK---------------------------- 200 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHH----------------------------
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccc----------------------------
Confidence 998888 6899999999999999999999999999999999877655442
Q ss_pred eeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCC
Q psy15549 302 FRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPY 381 (621)
Q Consensus 302 i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (621)
..+.|+|++..++.... ... .........+...+.++.|+.
T Consensus 201 -~~~~~~~~~~~~~~~~~-----~~~---------------~~~~~~~~~~~~~v~~~~~~~------------------ 241 (366)
T 3k26_A 201 -ESYDYNPNKTNRPFISQ-----KIH---------------FPDFSTRDIHRNYVDCVRWLG------------------ 241 (366)
T ss_dssp -HHHTCCGGGCSSCCCCE-----EEC---------------CCSEEECSSCSSCCCEEEEET------------------
T ss_pred -eeEEecCCCCcccccce-----eec---------------cCccccccCCcceEEEEEEcC------------------
Confidence 23556666655544331 111 111122334556666666653
Q ss_pred cEEEEEEcCCcEEEEeCCCCce--------------eEEEecccccceEEEEEcCC--CCeEEEEeCCCcEEEEEecCCc
Q psy15549 382 RIVIAVATENNILLYDTQHASP--------------FAFIANIHYTKLTDITWSSD--GKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 382 ~~l~~~~~dg~i~iwd~~~~~~--------------~~~~~~~h~~~v~~~~~spd--g~~l~s~s~dg~i~iw~~~~~~ 445 (621)
.++++++.|+.|++||+.++.. +..+ ..|...|++++|+|+ |++|++++.||.|++||+.+++
T Consensus 242 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 242 DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRF-DYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEE-ECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccc-cccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 6899999999999999988754 4444 468889999999999 9999999999999999999987
Q ss_pred CCc----ccCCC--CCcccccCCCCCCCCcccCCCcccHHHhccc
Q psy15549 446 IGI----PYVPP--SGEESKENDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 446 ~~~----~~~~~--~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
... .+..+ ...+..+.+++++..+++++.|+.+++|++.
T Consensus 321 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 321 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp GGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 554 66666 6789999999999999999999999999864
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=304.11 Aligned_cols=293 Identities=14% Similarity=0.123 Sum_probs=231.9
Q ss_pred eeeccccccccCcEEEEEEccCC-CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEE
Q psy15549 71 VEFASDLSRHQKAVNVVRFSPNG-ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASG 147 (621)
Q Consensus 71 ~~~~~~~~~h~~~V~~l~~spdg-~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~ 147 (621)
..+...+.+|...|++++|+|++ ++|++|+ |+.|++|++..+.. .......+|...|.+++|+| ++++|+++
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK-----TSFIQGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC-----EEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc-----ceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence 34455688999999999999999 8999988 88999999987632 22333457999999999999 78999999
Q ss_pred eCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Q psy15549 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL 227 (621)
Q Consensus 148 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~ 227 (621)
+.|+.|++||+.+.. .. .......|...|.+++|+|++++|++++.|+.|++||+ +++.+
T Consensus 138 ~~d~~i~iwd~~~~~-~~------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~ 197 (383)
T 3ei3_B 138 SIRGATTLRDFSGSV-IQ------------------VFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEI 197 (383)
T ss_dssp ETTTEEEEEETTSCE-EE------------------EEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEE
T ss_pred eCCCEEEEEECCCCc-eE------------------EEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEE
Confidence 999999999998532 11 11222345688999999999999999999999999999 67888
Q ss_pred EEeccCCcceEEEEEcCCCC-EEEEEeCCCcEEEEEccC----ceeeeecccCCCCCCCccccccccccccccCCcccce
Q psy15549 228 GILTEHKKFVQGVAWDPKNQ-YVATLSSDRSLRTYSIQS----KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFF 302 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~~-~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 302 (621)
..+..|...|.+++|+|+++ +|++++.|+.|++||+++ +..+..+ .+...|
T Consensus 198 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~------------------------~~~~~v 253 (383)
T 3ei3_B 198 FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM------------------------PHEKPV 253 (383)
T ss_dssp EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE------------------------ECSSCE
T ss_pred EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe------------------------cCCCce
Confidence 89999999999999999999 999999999999999987 3333322 245567
Q ss_pred eeeeecC-CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCC
Q psy15549 303 RRLTFSP-DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPY 381 (621)
Q Consensus 303 ~~~~~sp-dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (621)
.+++|+| ++++|++++
T Consensus 254 ~~~~~s~~~~~~l~~~~--------------------------------------------------------------- 270 (383)
T 3ei3_B 254 NAAYFNPTDSTKLLTTD--------------------------------------------------------------- 270 (383)
T ss_dssp EEEEECTTTSCEEEEEE---------------------------------------------------------------
T ss_pred EEEEEcCCCCCEEEEEc---------------------------------------------------------------
Confidence 8999999 888887766
Q ss_pred cEEEEEEcCCcEEEEeCCCCceeEEEec------c----------cccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 382 RIVIAVATENNILLYDTQHASPFAFIAN------I----------HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 382 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~----------h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
.|+.|++||+.+++....+.. . ....+..++|+|+|++ +++.||.|++||+.+++
T Consensus 271 -------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 271 -------QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp -------SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCC
T ss_pred -------CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCc
Confidence 445555555555544333321 0 1235566888888877 88899999999999999
Q ss_pred CCcccCCC--CCcccccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 446 IGIPYVPP--SGEESKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 446 ~~~~~~~~--~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
+...+..+ ...+..+.|++++..+++++ |+.+++|+++.
T Consensus 342 ~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 342 LVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred eeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 98888763 45566669999999999886 89999998753
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=308.44 Aligned_cols=302 Identities=16% Similarity=0.219 Sum_probs=249.6
Q ss_pred eccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC----C---CEE
Q psy15549 73 FASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN----G---ELL 144 (621)
Q Consensus 73 ~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~----g---~~l 144 (621)
....+.+|.+.|++++|+| ++|++|+ |+.|++|++...... ..+.....+.+|...|.+++|+|+ + ++|
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNE-NPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTC-CGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccc-cCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 3455889999999999999 7888877 889999999876311 112356677799999999999999 9 999
Q ss_pred EEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCC-----CCCeEEEEEC----CCCCE-EEEEeCCC
Q psy15549 145 ASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGH-----LEDVYDISWS----PTSTH-LISGSVDN 214 (621)
Q Consensus 145 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~i~~s----pd~~~-l~s~~~dg 214 (621)
++++.||.|++|++.++...... ....+..| ...|.+++|+ |++++ |++++.||
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg 148 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKV----------------IFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG 148 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCE----------------EEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS
T ss_pred EEEcCCCCEEEEEccCCcccccc----------------cceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC
Confidence 99999999999999987752111 12556677 5899999999 99999 99999999
Q ss_pred eEEEEECCC------CcEEE-----Ee-------ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCC
Q psy15549 215 TAIMWDVHK------GKNLG-----IL-------TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSK 276 (621)
Q Consensus 215 ~i~vwd~~~------~~~~~-----~~-------~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 276 (621)
.|++||+.+ ++.+. .+ ..|...|.+++|+|++ +|++++.||.|++||+++++.+..+...
T Consensus 149 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~- 226 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQ- 226 (397)
T ss_dssp CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECC-
T ss_pred cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecc-
Confidence 999999998 66555 66 4488899999999999 9999999999999999998877766420
Q ss_pred CCCCCccccccccccccccCCc---ccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcc
Q psy15549 277 LPVDSSHELFDKVVPLFHDDTM---KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQ 353 (621)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (621)
..+ ...|.+++|+|++++|++++
T Consensus 227 -------------------~~h~~~~~~i~~i~~~~~~~~l~~~~----------------------------------- 252 (397)
T 1sq9_A 227 -------------------HSMINNSNSIRSVKFSPQGSLLAIAH----------------------------------- 252 (397)
T ss_dssp -------------------C---CCCCCEEEEEECSSTTEEEEEE-----------------------------------
T ss_pred -------------------ccccccCCccceEEECCCCCEEEEEe-----------------------------------
Confidence 012 45678899999888777655
Q ss_pred cceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC---CcEEEEeCCCCceeEEEecc-------------cccceEE
Q psy15549 354 YYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE---NNILLYDTQHASPFAFIANI-------------HYTKLTD 417 (621)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~-------------h~~~v~~ 417 (621)
.| +.|++||+.+++.+..+. + |...|.+
T Consensus 253 -----------------------------------~d~~~g~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~ 296 (397)
T 1sq9_A 253 -----------------------------------DSNSFGCITLYETEFGERIGSLS-VPTHSSQASLGEFAHSSWVMS 296 (397)
T ss_dssp -----------------------------------EETTEEEEEEEETTTCCEEEEEC-BC--------CCBSBSSCEEE
T ss_pred -----------------------------------cCCCCceEEEEECCCCcccceec-cCcccccccccccccCCcEEE
Confidence 56 789999999988888774 5 8899999
Q ss_pred EEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccC------CC---------------CCcccccCCCCCC----------
Q psy15549 418 ITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYV------PP---------------SGEESKENDPTKG---------- 466 (621)
Q Consensus 418 ~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~------~~---------------~~~~~~~~~~~~~---------- 466 (621)
++|+|++++|++++.||.|++||+.+++....+. .+ ...+..+.+++++
T Consensus 297 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~ 376 (397)
T 1sq9_A 297 LSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLN 376 (397)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTS
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccccccc
Confidence 9999999999999999999999999999888888 66 7889999999998
Q ss_pred CCcccCCCcccHHHhcccC
Q psy15549 467 EPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 467 ~~~~s~~~~~~~~~w~~~~ 485 (621)
..+++++.|+.+++|++..
T Consensus 377 ~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 377 ESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp CEEEEEETTTEEEEEEEEC
T ss_pred ceEEEecCCCcEEEEEcCC
Confidence 6899999999999998754
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-36 Score=326.61 Aligned_cols=293 Identities=17% Similarity=0.269 Sum_probs=239.9
Q ss_pred eccccccccCcEEEEEEccCC-CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC
Q psy15549 73 FASDLSRHQKAVNVVRFSPNG-ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE 150 (621)
Q Consensus 73 ~~~~~~~h~~~V~~l~~spdg-~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d 150 (621)
....+.+|.+.|++++|+|++ .+|++|+ |+.|++|++....... ......+.+|...|.+++|+|++++|++|+.|
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~--~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY--GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS--CEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc--ccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 344588999999999999865 7899988 8899999997653211 13345678999999999999999999999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
|+|+|||+.++... ..+.+|...|.+++|+|++++|++|+.|++|++||+.........
T Consensus 452 g~v~vwd~~~~~~~---------------------~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 510 (694)
T 3dm0_A 452 GELRLWDLAAGVST---------------------RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS 510 (694)
T ss_dssp SEEEEEETTTTEEE---------------------EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred CcEEEEECCCCcce---------------------eEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeec
Confidence 99999999887643 667899999999999999999999999999999998655433332
Q ss_pred ---ccCCcceEEEEEcCCC--CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeee
Q psy15549 231 ---TEHKKFVQGVAWDPKN--QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL 305 (621)
Q Consensus 231 ---~~~~~~v~~l~~sp~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 305 (621)
.+|...|.+++|+|++ ..|++++.|+.|++||+++++....+. .|...|.++
T Consensus 511 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-----------------------~h~~~v~~v 567 (694)
T 3dm0_A 511 EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-----------------------GHTGYVSTV 567 (694)
T ss_dssp SSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC-----------------------CCSSCEEEE
T ss_pred cCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc-----------------------CCCCCEEEE
Confidence 4688899999999987 689999999999999999887766654 344567899
Q ss_pred eecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEE
Q psy15549 306 TFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVI 385 (621)
Q Consensus 306 ~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 385 (621)
+|+|+|++|++++
T Consensus 568 ~~spdg~~l~sg~------------------------------------------------------------------- 580 (694)
T 3dm0_A 568 AVSPDGSLCASGG------------------------------------------------------------------- 580 (694)
T ss_dssp EECTTSSEEEEEE-------------------------------------------------------------------
T ss_pred EEeCCCCEEEEEe-------------------------------------------------------------------
Confidence 9999888777655
Q ss_pred EEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCC----------
Q psy15549 386 AVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSG---------- 455 (621)
Q Consensus 386 ~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~---------- 455 (621)
.|+.|++||+.+++.+..+. +...|.+++|+|++.+|++++ |+.|++||+.++.+...+..+..
T Consensus 581 ---~Dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (694)
T 3dm0_A 581 ---KDGVVLLWDLAEGKKLYSLE--ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSG 654 (694)
T ss_dssp ---TTSBCEEEETTTTEEEECCB--CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------
T ss_pred ---CCCeEEEEECCCCceEEEec--CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccc
Confidence 68889999999888777663 456899999999998887765 56699999999877665543211
Q ss_pred ---------cccccCCCCCCCCcccCCCcccHHHhccc
Q psy15549 456 ---------EESKENDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 456 ---------~~~~~~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
.+..+.|+++|..+++++.|+.|++|++.
T Consensus 655 ~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 655 PAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 13456899999999999999999999864
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=304.04 Aligned_cols=276 Identities=13% Similarity=0.199 Sum_probs=203.1
Q ss_pred cCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccc----cccceeecccccccc-----
Q psy15549 11 HNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERES----GIANVEFASDLSRHQ----- 81 (621)
Q Consensus 11 ~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~----~~~~~~~~~~~~~h~----- 81 (621)
.|.+.|++|+|+|+++ +||+|+.||.|+ ||++..+.. ....+.+...+.+|.
T Consensus 26 ~~~~~V~~v~~s~~g~-----~la~g~~dg~v~--------------iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 86 (447)
T 3dw8_B 26 AEADIISTVEFNHSGE-----LLATGDKGGRVV--------------IFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDY 86 (447)
T ss_dssp CGGGSEEEEEECSSSS-----EEEEEETTSEEE--------------EEEECC-----CCCCCCEEEEEEEECCCCEEEG
T ss_pred cccCcEEEEEECCCCC-----EEEEEcCCCeEE--------------EEEecCCCCCCcccccceeEecccccccccccc
Confidence 4578999999999998 999999999999 888876542 112344556788998
Q ss_pred -------CcEEEEEEccCC--CEEEEEc-CCceEEEEeccCccccc------------------cc--------------
Q psy15549 82 -------KAVNVVRFSPNG--ELLASGD-DVGKEIWYLTERESGIA------------------NV-------------- 119 (621)
Q Consensus 82 -------~~V~~l~~spdg--~~las~~-d~~v~iw~~~~~~~~~~------------------~~-------------- 119 (621)
..|.+++|+|++ .+|++++ |+.|++|++........ .+
T Consensus 87 ~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (447)
T 3dw8_B 87 LKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEA 166 (447)
T ss_dssp GGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEE
T ss_pred cccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeec
Confidence 889999999998 7788777 99999999976421000 00
Q ss_pred eec-ccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC-CCCCCCCCcccccccccceeeeeeecCCCCCeEE
Q psy15549 120 EFA-SDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD-LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYD 197 (621)
Q Consensus 120 ~~~-~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 197 (621)
... ....+|...|.+++|+|++++|++| .|+.|++||+.+... ...+.. ....+.+|...|++
T Consensus 167 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~--------------~~~~~~~~~~~v~~ 231 (447)
T 3dw8_B 167 SPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDI--------------KPANMEELTEVITA 231 (447)
T ss_dssp EEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEEC--------------CCSSGGGCCCCEEE
T ss_pred cceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeec--------------ccccccccCcceEE
Confidence 001 1136799999999999999999998 799999999984332 100000 00135689999999
Q ss_pred EEECCCC-CEEEEEeCCCeEEEEECCCCcE----EEEeccCCc------------ceEEEEEcCCCCEEEEEeCCCcEEE
Q psy15549 198 ISWSPTS-THLISGSVDNTAIMWDVHKGKN----LGILTEHKK------------FVQGVAWDPKNQYVATLSSDRSLRT 260 (621)
Q Consensus 198 i~~spd~-~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~------------~v~~l~~sp~~~~l~s~~~dg~i~i 260 (621)
++|+|++ ++|++|+.||.|++||+++++. +..+..|.. .|.+++|+|++++|++++. +.|++
T Consensus 232 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~i 310 (447)
T 3dw8_B 232 AEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKV 310 (447)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEE
T ss_pred EEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEE
Confidence 9999998 9999999999999999999886 678888876 8999999999999999998 99999
Q ss_pred EEccC-ceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeee
Q psy15549 261 YSIQS-KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 261 wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
||+++ ++.+..+..+....... ...+.. ..-..+..++|+|++++|++++ .|+.+++|++.
T Consensus 311 wd~~~~~~~~~~~~~~~~~~~~l-------~~~~~~-~~i~~~~~~~~s~~~~~l~s~s-----~dg~v~iwd~~ 372 (447)
T 3dw8_B 311 WDLNMENRPVETYQVHEYLRSKL-------CSLYEN-DCIFDKFECCWNGSDSVVMTGS-----YNNFFRMFDRN 372 (447)
T ss_dssp EETTCCSSCSCCEESCGGGTTTH-------HHHHHT-SGGGCCCCEEECTTSSEEEEEC-----STTEEEEEETT
T ss_pred EeCCCCccccceeeccccccccc-------cccccc-cccccceEEEECCCCCEEEEec-----cCCEEEEEEcC
Confidence 99987 77666665432111000 000000 0001123589999999999888 78888888865
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=298.66 Aligned_cols=308 Identities=14% Similarity=0.168 Sum_probs=234.9
Q ss_pred cccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIV 155 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~v 155 (621)
+..|.+.|.+++|+|++++|++++ ++.|++|++..+. +.....+.+|...|.+++|+|++++|++++.||.|++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~v 78 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-----WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYV 78 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE-----EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc-----EEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEE
Confidence 455889999999999999999996 8899999998762 1367778899999999999999999999999999999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE----EEEec
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN----LGILT 231 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~----~~~~~ 231 (621)
||+.+++.. ....+..|...|.+++|+|++++|++++.|+.|++||+..+.. .....
T Consensus 79 wd~~~~~~~-------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~ 139 (372)
T 1k8k_C 79 WTLKGRTWK-------------------PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK 139 (372)
T ss_dssp EEEETTEEE-------------------EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT
T ss_pred EECCCCeee-------------------eeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeec
Confidence 999877532 1234467899999999999999999999999999999998762 33336
Q ss_pred cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC
Q psy15549 232 EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 311 (621)
.|...|.+++|+|++++|++++.||.|++||++............ .... ......+.....+...|.+++|+|++
T Consensus 140 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~ 214 (372)
T 1k8k_C 140 PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP----WGSK-MPFGELMFESSSSCGWVHGVCFSANG 214 (372)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBT----TBSC-CCTTCEEEECCCCSSCEEEEEECSSS
T ss_pred ccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccc----cccc-cchhhheEecCCCCCeEEEEEECCCC
Confidence 788999999999999999999999999999976432110000000 0000 00000000111223344555555544
Q ss_pred CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
+ ++++++.|+
T Consensus 215 ~----------------------------------------------------------------------~l~~~~~d~ 224 (372)
T 1k8k_C 215 S----------------------------------------------------------------------RVAWVSHDS 224 (372)
T ss_dssp S----------------------------------------------------------------------EEEEEETTT
T ss_pred C----------------------------------------------------------------------EEEEEeCCC
Confidence 4 455566889
Q ss_pred cEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC--Cc------------------------
Q psy15549 392 NILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD--NE------------------------ 445 (621)
Q Consensus 392 ~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~--~~------------------------ 445 (621)
.|++||+.+++.+..+. .|...|.+++|+|++++|+++ .||.|++|++.+ +.
T Consensus 225 ~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (372)
T 1k8k_C 225 TVCLADADKKMAVATLA-SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF 302 (372)
T ss_dssp EEEEEEGGGTTEEEEEE-CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHH
T ss_pred EEEEEECCCCceeEEEc-cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhh
Confidence 99999999999888885 588899999999999988887 999999999988 42
Q ss_pred --------CC------ccc-CCCCCcccccC-CCCCC---CCcccCCCcccHHHhcccC
Q psy15549 446 --------IG------IPY-VPPSGEESKEN-DPTKG---EPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 446 --------~~------~~~-~~~~~~~~~~~-~~~~~---~~~~s~~~~~~~~~w~~~~ 485 (621)
.. ..+ ..|...+..+. ++++| ..+++++.|+.+++|++..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 303 QNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp HHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred hhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 10 222 36778888886 44777 8999999999999999653
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-35 Score=288.70 Aligned_cols=286 Identities=12% Similarity=0.110 Sum_probs=230.8
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
++...|.+.|++++|+|+++ +|++|+.||.|+ ||++..+..... ...+.+|...|.+
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~-----~l~~~~~d~~v~--------------iw~~~~~~~~~~----~~~~~~~~~~v~~ 61 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKS-----LLLITSWDGSLT--------------VYKFDIQAKNVD----LLQSLRYKHPLLC 61 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGT-----EEEEEETTSEEE--------------EEEEETTTTEEE----EEEEEECSSCEEE
T ss_pred ecccCCCCcEEEEEEcCCCC-----EEEEEcCCCeEE--------------EEEeCCCCcccc----ceeeeecCCceEE
Confidence 45558999999999999998 999999999999 998887652111 2235589999999
Q ss_pred EEEccCCC-EEEEEc-CCceEEEEe-ccCccccccceecccccc--cCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC-
Q psy15549 87 VRFSPNGE-LLASGD-DVGKEIWYL-TERESGIANVEFASDLSR--HQKAVNVVRFSPNGELLASGDDESTIIVWKQKT- 160 (621)
Q Consensus 87 l~~spdg~-~las~~-d~~v~iw~~-~~~~~~~~~~~~~~~~~~--h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~- 160 (621)
++|+|+++ +|++++ ++.|++|++ ..+. ...+.+ |...|.+++|+| +++|++++.|+.|++||+.+
T Consensus 62 ~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--------~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~ 132 (342)
T 1yfq_A 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPS--------FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNY 132 (342)
T ss_dssp EEEEESSSEEEEEEETTSCEEEECSSSSSS--------EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHH
T ss_pred EEECCCCCcEEEEEcCCCeEEEEEeccCCc--------eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccc
Confidence 99999999 899888 889999999 7652 255677 999999999999 99999999999999999987
Q ss_pred --------CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-Cc--EEEE
Q psy15549 161 --------DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK-GK--NLGI 229 (621)
Q Consensus 161 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~-~~--~~~~ 229 (621)
.+.+.. + .|...|.+++|+|++ |++++.|+.|++||+++ +. ....
T Consensus 133 ~~~~~~~~~~~~~~---------------------~-~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~ 188 (342)
T 1yfq_A 133 GDGVIAVKNLNSNN---------------------T-KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIE 188 (342)
T ss_dssp TTBCEEEEESCSSS---------------------S-SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEE
T ss_pred ccccccccCCeeeE---------------------E-eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceee
Confidence 554432 2 388899999999987 99999999999999988 54 3334
Q ss_pred eccCCcceEEEEEcC-CCCEEEEEeCCCcEEEEEccCc------eeeeecccCCCCCCCccccccccccccccCCcccce
Q psy15549 230 LTEHKKFVQGVAWDP-KNQYVATLSSDRSLRTYSIQSK------KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFF 302 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 302 (621)
...|...|.+++|+| ++++|++++.||.|++|+++.. +....+..+.... ....+...|
T Consensus 189 ~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~i 254 (342)
T 1yfq_A 189 ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL--------------KDTNLAYPV 254 (342)
T ss_dssp ECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT--------------TCCSSCCCE
T ss_pred ecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccc--------------cccccceeE
Confidence 456888999999999 9999999999999999999876 4443333221100 011233467
Q ss_pred eeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCc
Q psy15549 303 RRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYR 382 (621)
Q Consensus 303 ~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (621)
.+++|+|++++|+++
T Consensus 255 ~~~~~s~~~~~l~~~----------------------------------------------------------------- 269 (342)
T 1yfq_A 255 NSIEFSPRHKFLYTA----------------------------------------------------------------- 269 (342)
T ss_dssp EEEEECTTTCCEEEE-----------------------------------------------------------------
T ss_pred EEEEEcCCCCEEEEe-----------------------------------------------------------------
Confidence 777787777666554
Q ss_pred EEEEEEcCCcEEEEeCCCCceeEEEeccc-ccceEEEEEcCCCCeEEEEeCCCc
Q psy15549 383 IVIAVATENNILLYDTQHASPFAFIANIH-YTKLTDITWSSDGKVLIASSTDGY 435 (621)
Q Consensus 383 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-~~~v~~~~~spdg~~l~s~s~dg~ 435 (621)
+.||.|++||+.+++.+..+. +| ...|++++ |+|++|++++.||+
T Consensus 270 -----~~dg~i~vwd~~~~~~~~~~~-~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 270 -----GSDGIISCWNLQTRKKIKNFA-KFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp -----ETTSCEEEEETTTTEEEEECC-CCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred -----cCCceEEEEcCccHhHhhhhh-cccCCCceEec--CCCCeEEEEecCCc
Confidence 478999999999999888874 46 99999999 99999999999998
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=284.39 Aligned_cols=281 Identities=21% Similarity=0.361 Sum_probs=232.1
Q ss_pred eEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCE
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGEL 95 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~ 95 (621)
+.+|+||+++ +||+|. |+.|+ |||+.+++.... ..+.+|...|++++|+|++++
T Consensus 28 ~~~l~WS~~~------~lAvg~-D~tV~--------------iWd~~tg~~~~~-----~~~~~~~~~V~~v~~~~~~~~ 81 (318)
T 4ggc_A 28 LNLVDWSSGN------VLAVAL-DNSVY--------------LWSASSGDILQL-----LQMEQPGEYISSVAWIKEGNY 81 (318)
T ss_dssp CBCEEECTTS------EEEEEE-TTEEE--------------EEETTTCCEEEE-----EECCSTTCCEEEEEECTTSSE
T ss_pred ceEEEECCCC------EEEEEe-CCEEE--------------EEECCCCCEEEE-----EEecCCCCeEEEEEECCCCCE
Confidence 5789999986 788875 89999 999887764332 235678889999999999999
Q ss_pred EEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCccc
Q psy15549 96 LASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDE 174 (621)
Q Consensus 96 las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 174 (621)
|++|+ |+.|++|++..+ +.+..+.+|...+.++.+ ++.+|++++.++.+++|+.......
T Consensus 82 l~sgs~Dg~v~iw~~~~~-------~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~---------- 142 (318)
T 4ggc_A 82 LAVGTSSAEVQLWDVQQQ-------KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHH---------- 142 (318)
T ss_dssp EEEEETTSEEEEEETTTT-------EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE----------
T ss_pred EEEEECCCcEEEeecCCc-------eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCcee----------
Confidence 99998 888999999987 677788899998877655 5679999999999999998776542
Q ss_pred ccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE----EEEeccCCcceEEEEEcCCCCEE-
Q psy15549 175 ENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN----LGILTEHKKFVQGVAWDPKNQYV- 249 (621)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~~v~~l~~sp~~~~l- 249 (621)
...+.+|...+.++.+++++++|++++.|+.|++||+++++. ......+.+.|.+++++|++..+
T Consensus 143 ----------~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 212 (318)
T 4ggc_A 143 ----------VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL 212 (318)
T ss_dssp ----------EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEE
T ss_pred ----------EEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEE
Confidence 466789999999999999999999999999999999987653 34556688899999999977543
Q ss_pred --EEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCC
Q psy15549 250 --ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDST 327 (621)
Q Consensus 250 --~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~ 327 (621)
++++.++.|++||........... +...+..+.|+|++..+++++
T Consensus 213 ~~~~~~~~~~i~lwd~~~~~~~~~~~------------------------~~~~v~~~~~~~~~~~~~~~s--------- 259 (318)
T 4ggc_A 213 ATGGGTSDRHIRIWNVCSGACLSAVD------------------------AHSQVCSILWSPHYKELISGH--------- 259 (318)
T ss_dssp EEEECTTTCEEEEEETTTCCEEEEEE------------------------CSSCEEEEEEETTTTEEEEEE---------
T ss_pred EEEecCCCCEEEEEeccccccccccc------------------------ceeeeeeeeecccccceEEEE---------
Confidence 356678999999998876654432 223457788888887776544
Q ss_pred CcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEE
Q psy15549 328 RKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFI 407 (621)
Q Consensus 328 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 407 (621)
++.|+.|++||+.+++++..+
T Consensus 260 -----------------------------------------------------------g~~d~~i~iwd~~~~~~~~~l 280 (318)
T 4ggc_A 260 -----------------------------------------------------------GFAQNQLVIWKYPTMAKVAEL 280 (318)
T ss_dssp -----------------------------------------------------------CTTTCCEEEEETTTCCEEEEE
T ss_pred -----------------------------------------------------------EcCCCEEEEEECCCCcEEEEE
Confidence 226899999999999999988
Q ss_pred ecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 408 ANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 408 ~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
.+|.+.|++++|+|||++||||+.||+|+|||+.+.
T Consensus 281 -~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 281 -KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp -CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred -cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 579999999999999999999999999999998754
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=303.35 Aligned_cols=319 Identities=18% Similarity=0.240 Sum_probs=268.5
Q ss_pred cccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcE
Q psy15549 75 SDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTI 153 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i 153 (621)
..+.+|.+.|.. +++++|++|++|+ |+.|++|++..+ .....+.+|...|.+++|+ +++|++|+.||+|
T Consensus 112 ~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i 181 (445)
T 2ovr_B 112 KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTG-------KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTL 181 (445)
T ss_dssp EEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTC-------CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCE
T ss_pred EEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCC-------cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeE
Confidence 457899887543 3556789999988 889999999877 6677788999999999997 5699999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH 233 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 233 (621)
++||+.+++.+ ..+.+|...|.++.|+ ++.|++|+.||.|++||+.+++.+..+.+|
T Consensus 182 ~vwd~~~~~~~---------------------~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~ 238 (445)
T 2ovr_B 182 KVWNAETGECI---------------------HTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGH 238 (445)
T ss_dssp EEEETTTTEEE---------------------EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECC
T ss_pred EEEECCcCcEE---------------------EEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 99999888643 6677899999999995 568999999999999999999999999999
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
...|.+++| ++++|++++.||.|++||+++++.+..+.. +...|.+++| ++.+
T Consensus 239 ~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----------------------~~~~v~~~~~--~~~~ 291 (445)
T 2ovr_B 239 VAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQG-----------------------HTNRVYSLQF--DGIH 291 (445)
T ss_dssp SSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECC-----------------------CSSCEEEEEE--CSSE
T ss_pred cccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecC-----------------------CCCceEEEEE--CCCE
Confidence 999999999 688999999999999999999988777643 3345688888 8899
Q ss_pred EEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcE
Q psy15549 314 LIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNI 393 (621)
Q Consensus 314 l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 393 (621)
+++++ .|+.+++|++... .....+.++...+.++.+. ++.+++++.||.|
T Consensus 292 l~~~~-----~d~~i~i~d~~~~-------~~~~~~~~~~~~v~~~~~~------------------~~~l~~~~~dg~i 341 (445)
T 2ovr_B 292 VVSGS-----LDTSIRVWDVETG-------NCIHTLTGHQSLTSGMELK------------------DNILVSGNADSTV 341 (445)
T ss_dssp EEEEE-----TTSCEEEEETTTC-------CEEEEECCCCSCEEEEEEE------------------TTEEEEEETTSCE
T ss_pred EEEEe-----CCCeEEEEECCCC-------CEEEEEcCCcccEEEEEEe------------------CCEEEEEeCCCeE
Confidence 99998 8999999997542 2233445555555555543 3789999999999
Q ss_pred EEEeCCCCceeEEEec--ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCccc-----CCCCCcccccCCCCCC
Q psy15549 394 LLYDTQHASPFAFIAN--IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY-----VPPSGEESKENDPTKG 466 (621)
Q Consensus 394 ~iwd~~~~~~~~~~~~--~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 466 (621)
++||+.+++.+..+.. .|...|++++|+ +++|++|+.||.|++||+.+++....+ ..+...+..+.+++++
T Consensus 342 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 419 (445)
T 2ovr_B 342 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK 419 (445)
T ss_dssp EEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSE
T ss_pred EEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCE
Confidence 9999999998888743 388899999995 679999999999999999999988777 3567778889999999
Q ss_pred CCcccCCCccc----HHHhcccC
Q psy15549 467 EPVRSEDKPRS----AEQAKGEG 485 (621)
Q Consensus 467 ~~~~s~~~~~~----~~~w~~~~ 485 (621)
..+++++.||. +.+|+...
T Consensus 420 ~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 420 LVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEEEcccCCCCccEEEEEECCC
Confidence 99999999987 77787554
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=286.43 Aligned_cols=287 Identities=20% Similarity=0.209 Sum_probs=245.0
Q ss_pred eeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC
Q psy15549 72 EFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE 150 (621)
Q Consensus 72 ~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d 150 (621)
++...+.+|.+.|.+++| |++.+|++++ |+.|++|++... .....+..|...|.+++|+|++++|++++.|
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 80 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ-------WLGTVVYTGQGFLNSVCYDSEKELLLFGGKD 80 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSS-------EEEEEEEECSSCEEEEEEETTTTEEEEEETT
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC-------EEEEEeecCCccEEEEEECCCCCEEEEecCC
Confidence 345678999999999999 9999999988 888999999776 5667778899999999999999999999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
|.|++|++........ ...+.+|...|.+++| ++++|++++.||.|++|| .++.+..+
T Consensus 81 g~i~~~~~~~~~~~~~------------------~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~ 138 (313)
T 3odt_A 81 TMINGVPLFATSGEDP------------------LYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNL 138 (313)
T ss_dssp SCEEEEETTCCTTSCC-------------------CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEE
T ss_pred CeEEEEEeeecCCCCc------------------ccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEec
Confidence 9999999987653322 2566789999999999 577999999999999999 67888888
Q ss_pred ccCCcceEEEEEcC-CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC
Q psy15549 231 TEHKKFVQGVAWDP-KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309 (621)
Q Consensus 231 ~~~~~~v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 309 (621)
..|...+.+++|+| ++++|++++.||.|++||. .+....+.. .+...+.+++|+|
T Consensus 139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~----------------------~~~~~i~~~~~~~ 194 (313)
T 3odt_A 139 QAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSG----------------------IHNDVVRHLAVVD 194 (313)
T ss_dssp ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECS----------------------SCSSCEEEEEEEE
T ss_pred ccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEec----------------------cCcccEEEEEEcC
Confidence 89999999999998 8999999999999999993 333333321 1344567777777
Q ss_pred CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc
Q psy15549 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT 389 (621)
Q Consensus 310 dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (621)
++. ++ +++.
T Consensus 195 ~~~-~~----------------------------------------------------------------------~~~~ 203 (313)
T 3odt_A 195 DGH-FI----------------------------------------------------------------------SCSN 203 (313)
T ss_dssp TTE-EE----------------------------------------------------------------------EEET
T ss_pred CCe-EE----------------------------------------------------------------------EccC
Confidence 765 43 3457
Q ss_pred CCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCc
Q psy15549 390 ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPV 469 (621)
Q Consensus 390 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (621)
|+.|++||+.+++.+..+. +|...|++++|+|+| .|++++.||.|++||+.+++....+..+...+..+.+++++. +
T Consensus 204 dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~ 280 (313)
T 3odt_A 204 DGLIKLVDMHTGDVLRTYE-GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-I 280 (313)
T ss_dssp TSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-E
T ss_pred CCeEEEEECCchhhhhhhh-cCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-E
Confidence 8999999999999888884 699999999999999 699999999999999999999999999998999999999998 6
Q ss_pred ccCCCcccHHHhcccCc
Q psy15549 470 RSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 470 ~s~~~~~~~~~w~~~~~ 486 (621)
++++.|+.+++|++...
T Consensus 281 ~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 281 IVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp EEEETTSCEEEEESCGG
T ss_pred EEEeCCCcEEEEeCCCC
Confidence 67889999999997654
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=290.57 Aligned_cols=253 Identities=17% Similarity=0.303 Sum_probs=199.8
Q ss_pred ccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC--CCCEEEEEeCCCc
Q psy15549 76 DLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--NGELLASGDDEST 152 (621)
Q Consensus 76 ~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp--~g~~l~s~s~dg~ 152 (621)
.+.+|.+.|++++|+|+|++||+|+ |+.|+||++..+.. .....+.+|...|++++|++ ++++|++|+.|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~-----~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ-----ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE-----EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc-----EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 3678999999999999999999998 88899999986521 34567889999999999986 4899999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEECCCCcE---E
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT--STHLISGSVDNTAIMWDVHKGKN---L 227 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd--~~~l~s~~~dg~i~vwd~~~~~~---~ 227 (621)
|++||+.++... ....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+..+.. .
T Consensus 83 v~iWd~~~~~~~-------------------~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 83 VIIWREENGTWE-------------------KSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK 143 (316)
T ss_dssp EEEECCSSSCCC-------------------EEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC
T ss_pred EEEEECCCCcce-------------------EEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee
Confidence 999999876421 23556789999999999997 78999999999999999987632 3
Q ss_pred EEeccCCcceEEEEEcCC-----------------CCEEEEEeCCCcEEEEEccCce---eeeecccCCCCCCCcccccc
Q psy15549 228 GILTEHKKFVQGVAWDPK-----------------NQYVATLSSDRSLRTYSIQSKK---VISRACRSKLPVDSSHELFD 287 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~-----------------~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~ 287 (621)
..+.+|...|.+++|+|+ +++|++|+.|+.|++||++... .+..+
T Consensus 144 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l--------------- 208 (316)
T 3bg1_A 144 KINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL--------------- 208 (316)
T ss_dssp CBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC---------------
T ss_pred eeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec---------------
Confidence 455789999999999997 4789999999999999997542 33322
Q ss_pred ccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeee
Q psy15549 288 KVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFE 367 (621)
Q Consensus 288 ~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (621)
..|...|.+++|+|++..
T Consensus 209 --------~~h~~~V~~v~~sp~~~~------------------------------------------------------ 226 (316)
T 3bg1_A 209 --------EAHSDWVRDVAWAPSIGL------------------------------------------------------ 226 (316)
T ss_dssp --------BCCSSCEEEEECCCCSSC------------------------------------------------------
T ss_pred --------ccCCCceEEEEecCCCCC------------------------------------------------------
Confidence 234556788889887611
Q ss_pred cCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC---c-eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 368 LKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA---S-PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~-~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
++..|++++.|++|++||+.+. . ....+ ..|...|.+++|+|+|++||+++.||+|++|+..
T Consensus 227 ------------~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~-~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 227 ------------PTSTIASCSQDGRVFIWTCDDASSNTWSPKLL-HKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ------------SCCEEEEEETTCEEEEEECSSTTCCCCBCCEE-EECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ------------CCceEEEEcCCCeEEEEEccCccccchhhhhh-hcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 1144666678899999988763 1 12223 3588899999999999999999999999999986
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=305.49 Aligned_cols=317 Identities=18% Similarity=0.239 Sum_probs=260.7
Q ss_pred cccccccCcE-EEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 75 SDLSRHQKAV-NVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 75 ~~~~~h~~~V-~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
..+.+|...| .++.| ++.+|++|+ |+.|++|++..+ .....+.+|...|.+++|+|++ +|++|+.||+
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~-------~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~ 184 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK-------KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRT 184 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECSTT-EEEEEETTSC
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC-------cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCC
Confidence 3578898875 56555 577999988 889999999877 6777888999999999999988 9999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEEC--CCCCEEEEEeCCCeEEEEECCCCcE----
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS--PTSTHLISGSVDNTAIMWDVHKGKN---- 226 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s--pd~~~l~s~~~dg~i~vwd~~~~~~---- 226 (621)
|++||+.+++.+ ..+.+|...|.+++|+ +++.+|++|+.||.|++||+.++..
T Consensus 185 i~vwd~~~~~~~---------------------~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 243 (464)
T 3v7d_B 185 VRVWDIKKGCCT---------------------HVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDH 243 (464)
T ss_dssp EEEEETTTTEEE---------------------EEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC---
T ss_pred EEEEECCCCcEE---------------------EEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccc
Confidence 999999988643 6678899999999998 5788999999999999999987652
Q ss_pred -------------------EEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccc
Q psy15549 227 -------------------LGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFD 287 (621)
Q Consensus 227 -------------------~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (621)
+..+.+|...|.++ ++++++|++++.||.|++||+++++.+..+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~------------- 308 (464)
T 3v7d_B 244 GEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG------------- 308 (464)
T ss_dssp ---CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECC-------------
T ss_pred cccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-------------
Confidence 45667888888776 57799999999999999999999988777643
Q ss_pred ccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeee
Q psy15549 288 KVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFE 367 (621)
Q Consensus 288 ~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (621)
+...|.+++|+|+++++++++ .|+.+++|++... .....+.+|...+.++.+++
T Consensus 309 ----------~~~~v~~~~~~~~~~~l~sg~-----~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~---- 362 (464)
T 3v7d_B 309 ----------HTDRIYSTIYDHERKRCISAS-----MDTTIRIWDLENG-------ELMYTLQGHTALVGLLRLSD---- 362 (464)
T ss_dssp ----------CSSCEEEEEEETTTTEEEEEE-----TTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECS----
T ss_pred ----------CCCCEEEEEEcCCCCEEEEEe-----CCCcEEEEECCCC-------cEEEEEeCCCCcEEEEEEcC----
Confidence 345679999999999999999 8999999997532 23345567778888887765
Q ss_pred cCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCC
Q psy15549 368 LKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIG 447 (621)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~ 447 (621)
.++++++.||.|++||+.++....... |...+..++|++++++|++++ ||.|++||+.++++.
T Consensus 363 --------------~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 363 --------------KFLVSAAADGSIRGWDANDYSRKFSYH--HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp --------------SEEEEEETTSEEEEEETTTCCEEEEEE--CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEE
T ss_pred --------------CEEEEEeCCCcEEEEECCCCceeeeec--CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEE
Confidence 789999999999999999988766653 667888999999999999998 899999999999988
Q ss_pred cc-cCCCCCcccccCCCCCCCCcccCCCcccHHHh
Q psy15549 448 IP-YVPPSGEESKENDPTKGEPVRSEDKPRSAEQA 481 (621)
Q Consensus 448 ~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w 481 (621)
.. +..+...+..+.++ ....+++.+.++.+.+|
T Consensus 426 ~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 426 HANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp ESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred ehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 75 56677778888875 22334444455544443
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=297.12 Aligned_cols=290 Identities=12% Similarity=0.165 Sum_probs=233.5
Q ss_pred ccccccCcEEEEEEccCCCEEE-EEc----CCceEEEEeccCccccccceecccccccCCCeEEEEECCC---CCEEEEE
Q psy15549 76 DLSRHQKAVNVVRFSPNGELLA-SGD----DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN---GELLASG 147 (621)
Q Consensus 76 ~~~~h~~~V~~l~~spdg~~la-s~~----d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~---g~~l~s~ 147 (621)
.+.+|...|.+++|+|++..++ +++ |+.|++|++..+. .......+|...|.+++|+|+ +++|++|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~ 86 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD------LKLLREIEKAKPIKCGTFGATSLQQRYLATG 86 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS------EEEEEEEEESSCEEEEECTTCCTTTCCEEEE
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc------ccceeeecccCcEEEEEEcCCCCCCceEEEe
Confidence 3578999999999999996555 553 6789999998763 112223378999999999998 6999999
Q ss_pred eCCCcEEEEEccCCC-CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEE------ECCCCCEEEEEeCCCeEEEEE
Q psy15549 148 DDESTIIVWKQKTDQ-DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDIS------WSPTSTHLISGSVDNTAIMWD 220 (621)
Q Consensus 148 s~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~------~spd~~~l~s~~~dg~i~vwd 220 (621)
+.||.|++||+.++. .+ ..+.+|...|.+++ |+|++++|++++.||.|++||
T Consensus 87 ~~dg~i~iwd~~~~~~~~---------------------~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd 145 (357)
T 3i2n_A 87 DFGGNLHIWNLEAPEMPV---------------------YSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWD 145 (357)
T ss_dssp ETTSCEEEECTTSCSSCS---------------------EEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEEC
T ss_pred cCCCeEEEEeCCCCCccE---------------------EEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEe
Confidence 999999999999876 32 56779999999995 578999999999999999999
Q ss_pred CCCCc-EEEEeccCCc----ceEEEE----EcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccccc
Q psy15549 221 VHKGK-NLGILTEHKK----FVQGVA----WDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVP 291 (621)
Q Consensus 221 ~~~~~-~~~~~~~~~~----~v~~l~----~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (621)
+.++. .+..+..|.+ .+.+++ |+|++++|++++.||.|++||+++++.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~------------------- 206 (357)
T 3i2n_A 146 PRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET------------------- 206 (357)
T ss_dssp TTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE-------------------
T ss_pred CCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec-------------------
Confidence 99887 6777766554 788888 7889999999999999999999988764432
Q ss_pred ccccCCcccceeeeeecC---CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeec
Q psy15549 292 LFHDDTMKSFFRRLTFSP---DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFEL 368 (621)
Q Consensus 292 ~~~~~~~~~~i~~~~~sp---dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (621)
.+...|.+++|+| ++.+|++++
T Consensus 207 -----~~~~~v~~~~~~~~~~~~~~l~~~~-------------------------------------------------- 231 (357)
T 3i2n_A 207 -----NIKNGVCSLEFDRKDISMNKLVATS-------------------------------------------------- 231 (357)
T ss_dssp -----ECSSCEEEEEESCSSSSCCEEEEEE--------------------------------------------------
T ss_pred -----CCCCceEEEEcCCCCCCCCEEEEEC--------------------------------------------------
Confidence 2344578899998 676666554
Q ss_pred CCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEe----cccccceEEEEEcCCCC-eEEEEeCCCcEEEEEecC
Q psy15549 369 KPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIA----NIHYTKLTDITWSSDGK-VLIASSTDGYCSIISFGD 443 (621)
Q Consensus 369 ~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~h~~~v~~~~~spdg~-~l~s~s~dg~i~iw~~~~ 443 (621)
.||.|++||+.+++.+..+. .+|...|++++|+|+++ +|++++.||.|++|++..
T Consensus 232 --------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 232 --------------------LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp --------------------STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred --------------------CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 56677777776655443332 36899999999999999 899999999999999986
Q ss_pred Cc-------------------CCcccCCCCCcccccCCCCCCCCcc-cCCCcccHHHhcccCc
Q psy15549 444 NE-------------------IGIPYVPPSGEESKENDPTKGEPVR-SEDKPRSAEQAKGEGK 486 (621)
Q Consensus 444 ~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~~~~w~~~~~ 486 (621)
+. ....+..|...+..+.+++++..++ +++.|+.+++|++...
T Consensus 292 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 292 PIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp CSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred CcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 53 3445667888899999999999998 8999999999997643
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-36 Score=306.41 Aligned_cols=295 Identities=15% Similarity=0.152 Sum_probs=221.4
Q ss_pred cccccccCcEEEEEEcc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCC
Q psy15549 75 SDLSRHQKAVNVVRFSP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDES 151 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg 151 (621)
....+|...|+||+|+| ++++||+|+ |+.|+||++..+.. .....+.+|.+.|++++|+| ++++|++|+.||
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-----~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~ 187 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-----PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG 187 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-----CEEECCCSSSCCCCEEEECSSCTTEEEEECSSS
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-----eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC
Confidence 34567889999999999 567899988 88999999987632 34455678999999999998 789999999999
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 231 (621)
+|++||+.+.... .......+...+.+++|+|++++|++|+.||.|++||++ ++.+..+.
T Consensus 188 ~v~iwd~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~ 247 (435)
T 4e54_B 188 TTRLQDFKGNILR-------------------VFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLR 247 (435)
T ss_dssp CEEEEETTSCEEE-------------------EEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSB
T ss_pred EEEEeeccCCcee-------------------EEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEe
Confidence 9999999765321 112223445568899999999999999999999999985 55677888
Q ss_pred cCCcceEEEEEcCCCC-EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 232 EHKKFVQGVAWDPKNQ-YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
+|...|.+++|+|++. +|++++.|+.|++||+++.+....+. ....|...|.+++|+|+
T Consensus 248 ~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~--------------------~~~~h~~~v~~~~~spd 307 (435)
T 4e54_B 248 MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFL--------------------YSLPHRHPVNAACFSPD 307 (435)
T ss_dssp CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCS--------------------BCCBCSSCEEECCBCTT
T ss_pred cccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEE--------------------EeeeccccccceeECCC
Confidence 9999999999999886 78899999999999998765433221 12345567888999998
Q ss_pred CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 311 g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
|++|++++ .|
T Consensus 308 g~~l~s~~----------------------------------------------------------------------~D 317 (435)
T 4e54_B 308 GARLLTTD----------------------------------------------------------------------QK 317 (435)
T ss_dssp SSEEEEEE----------------------------------------------------------------------SS
T ss_pred CCeeEEEc----------------------------------------------------------------------CC
Confidence 88877766 55
Q ss_pred CcEEEEeCCCCceeEEEeccccc------ceEEEEEcCCCCeEEEEe------------CCCcEEEEEecCCcCCcccC-
Q psy15549 391 NNILLYDTQHASPFAFIANIHYT------KLTDITWSSDGKVLIASS------------TDGYCSIISFGDNEIGIPYV- 451 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~------~v~~~~~spdg~~l~s~s------------~dg~i~iw~~~~~~~~~~~~- 451 (621)
+.|+|||+.++.....+. .|.. .+..+.|+|++.++++++ .++.|++||..++++...+.
T Consensus 318 ~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~ 396 (435)
T 4e54_B 318 SEIRVYSASQWDCPLGLI-PHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYD 396 (435)
T ss_dssp SCEEEEESSSSSSEEEEC-CCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECC
T ss_pred CEEEEEECCCCccceEEe-cccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeC
Confidence 666666666655444432 1221 233445566555555543 34679999999998877765
Q ss_pred CCCCccccc-CCCCCCCCcccCCCcccHHHhcccCc
Q psy15549 452 PPSGEESKE-NDPTKGEPVRSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 452 ~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~w~~~~~ 486 (621)
.+...+..+ .|+|+|..+++++ ++.|++|+++..
T Consensus 397 ~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 397 PESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp SSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC--
T ss_pred CCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcC
Confidence 455566665 6899999999876 778999997643
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-36 Score=309.04 Aligned_cols=326 Identities=13% Similarity=0.115 Sum_probs=232.4
Q ss_pred ccc-ccccCcEEEEEEcc-CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC
Q psy15549 75 SDL-SRHQKAVNVVRFSP-NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES 151 (621)
Q Consensus 75 ~~~-~~h~~~V~~l~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg 151 (621)
..+ .+|.+.|++++|+| ++++|++|+ |+.|++|++....... ....... .+|...|.+++|+|++++|++|+.||
T Consensus 56 ~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~-~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~dg 133 (437)
T 3gre_A 56 ATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE-VYSSSLT-YDCSSTVTQITMIPNFDAFAVSSKDG 133 (437)
T ss_dssp EEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC-CCSCSEE-EECSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc-ccceeee-ccCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 346 88999999999999 999999998 8889999997621110 0111222 25899999999999999999999999
Q ss_pred cEEEEEcc---CCCCCCCCCCCCcccccccccceeeeeeecC--CCCCeEEEE--ECCCCCEEEEEeCCCeEEEEECCCC
Q psy15549 152 TIIVWKQK---TDQDLPEFPSSNLDEENVNKEHWIVTKILRG--HLEDVYDIS--WSPTSTHLISGSVDNTAIMWDVHKG 224 (621)
Q Consensus 152 ~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~i~--~spd~~~l~s~~~dg~i~vwd~~~~ 224 (621)
.|++||+. +++....+. ........+.. +...+.++. +++++.+|++++.|+.|++||++++
T Consensus 134 ~i~vwd~~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 202 (437)
T 3gre_A 134 QIIVLKVNHYQQESEVKFLN-----------CECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL 202 (437)
T ss_dssp EEEEEEEEEEEETTEEEEEE-----------EEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC
T ss_pred EEEEEEeccccCCceeeccc-----------cceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 99999995 433221110 00000111122 667788888 6789999999999999999999999
Q ss_pred cEEEEecc--CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccce
Q psy15549 225 KNLGILTE--HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFF 302 (621)
Q Consensus 225 ~~~~~~~~--~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 302 (621)
+.+..+.. |...|.+++|+|++++|++|+.||.|++||+++++.+..+.. .+...|
T Consensus 203 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----------------------~~~~~v 260 (437)
T 3gre_A 203 ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF----------------------GDHAPI 260 (437)
T ss_dssp CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC----------------------TTCEEE
T ss_pred eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec----------------------CCCCce
Confidence 99999987 889999999999999999999999999999999888776531 223456
Q ss_pred eeeee----cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCcc
Q psy15549 303 RRLTF----SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFK 378 (621)
Q Consensus 303 ~~~~~----spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (621)
.+++| ++++.+|++++ .|+.+++|++.... ....+.++...+..+.|.|.
T Consensus 261 ~~~~~~~~~s~~~~~l~s~~-----~dg~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~-------------- 314 (437)
T 3gre_A 261 THVEVCQFYGKNSVIVVGGS-----SKTFLTIWNFVKGH-------CQYAFINSDEQPSMEHFLPI-------------- 314 (437)
T ss_dssp EEEEECTTTCTTEEEEEEES-----TTEEEEEEETTTTE-------EEEEEESSSSCCCGGGGSCB--------------
T ss_pred EEEEeccccCCCccEEEEEc-----CCCcEEEEEcCCCc-------EEEEEEcCCCCCccceeccc--------------
Confidence 78844 44566666666 56666666543211 11122223333333333330
Q ss_pred CCCcEEEEEEcCCcEEEEeCCCCceeEEEe-cccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCC-----
Q psy15549 379 LPYRIVIAVATENNILLYDTQHASPFAFIA-NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP----- 452 (621)
Q Consensus 379 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~----- 452 (621)
+..+ .+.. +. ..|...|++++|+ ++++|++|+.||.|++||+.+++....+..
T Consensus 315 --~~~l----~~~~--------------~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 373 (437)
T 3gre_A 315 --EKGL----EELN--------------FCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFS 373 (437)
T ss_dssp --CSSG----GGCC--------------CCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CC
T ss_pred --cccc----ccce--------------ecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccC
Confidence 0000 0000 00 1277889999999 889999999999999999999988877765
Q ss_pred --------------------------------CCCcccccCCCCC--CCCcccCCCcccHHHhc
Q psy15549 453 --------------------------------PSGEESKENDPTK--GEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 453 --------------------------------~~~~~~~~~~~~~--~~~~~s~~~~~~~~~w~ 482 (621)
|...+..+.+.++ +..+++++.+|.|++|+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 374 DVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 5566677777766 66888999999998884
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-36 Score=302.38 Aligned_cols=265 Identities=15% Similarity=0.203 Sum_probs=194.2
Q ss_pred cccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIV 155 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~v 155 (621)
+..|.+.|++++|+|+|++|++++ |+.|++|++..+. ......+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~v 81 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG-----WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYV 81 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE-----EEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc-----eEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 344678999999999999999996 8899999998652 2456778899999999999999999999999999999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc---EEEEecc
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK---NLGILTE 232 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~ 232 (621)
||+.++.... ....+.+|...|.+++|+|++++|++++.|+.|++||+++++ ....+..
T Consensus 82 wd~~~~~~~~------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 143 (377)
T 3dwl_C 82 YEKRPDGTWK------------------QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR 143 (377)
T ss_dssp C------CCC------------------CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS
T ss_pred EEcCCCCcee------------------eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec
Confidence 9998876211 125567899999999999999999999999999999999887 3677777
Q ss_pred -CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC
Q psy15549 233 -HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 233 -~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 311 (621)
|...|.+++|+|++++|++++.|+.|++||+............. .+... .....+... .+...|.+++|+|++
T Consensus 144 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~-~~~~~v~~~~~sp~~ 217 (377)
T 3dwl_C 144 PLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASV----WGSRL-PFNTVCAEY-PSGGWVHAVGFSPSG 217 (377)
T ss_dssp SCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCS----SCSCC-CEEEEEECC-CCSSSEEEEEECTTS
T ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccc----ccccc-chhhhhhcc-cCCceEEEEEECCCC
Confidence 99999999999999999999999999999997544221110000 00000 000001111 444556666666666
Q ss_pred CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
++|++ ++.|+
T Consensus 218 ~~l~~----------------------------------------------------------------------~~~d~ 227 (377)
T 3dwl_C 218 NALAY----------------------------------------------------------------------AGHDS 227 (377)
T ss_dssp SCEEE----------------------------------------------------------------------EETTT
T ss_pred CEEEE----------------------------------------------------------------------EeCCC
Confidence 65555 44678
Q ss_pred cEEEEeCCCCce----eEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 392 NILLYDTQHASP----FAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 392 ~i~iwd~~~~~~----~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
.|++||+.+++. +..+ .+|...|++++|+|+|++|++++.|+.+ +|+..
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 228 SVTIAYPSAPEQPPRALITV-KLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEC-CEECSTTSCEEECCCE-ECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred cEEEEECCCCCCcceeeEee-cCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 888888888776 5555 4689999999999999999998766655 77665
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=295.07 Aligned_cols=280 Identities=20% Similarity=0.363 Sum_probs=226.5
Q ss_pred cCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEc
Q psy15549 11 HNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 90 (621)
Q Consensus 11 ~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 90 (621)
+|..+|+|++| +++ +|++|+.||.|+ +||+.+++.. ..+.+|.+.|.+++|
T Consensus 131 ~~~~~v~~~~~--d~~-----~l~~g~~dg~i~--------------iwd~~~~~~~-------~~~~~h~~~v~~l~~- 181 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQ-----KIVSGLRDNTIK--------------IWDKNTLECK-------RILTGHTGSVLCLQY- 181 (435)
T ss_dssp SSCCCEEEEEC--CSS-----EEEEEESSSCEE--------------EEESSSCCEE-------EEECCCSSCEEEEEC-
T ss_pred CCCCcEEEEEE--CCC-----EEEEEeCCCeEE--------------EEeCCCCeEE-------EEEcCCCCcEEEEEE-
Confidence 46678999988 676 999999999999 9988776543 347899999999999
Q ss_pred cCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 91 PNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 91 pdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
++++|++|+ |+.|++|++..+ .....+.+|...|.+++|++ .+|++|+.||.|++||+.++....
T Consensus 182 -~~~~l~sg~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~---- 247 (435)
T 1p22_A 182 -DERVIITGSSDSTVRVWDVNTG-------EMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDIT---- 247 (435)
T ss_dssp -CSSEEEEEETTSCEEEEESSSC-------CEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCE----
T ss_pred -CCCEEEEEcCCCeEEEEECCCC-------cEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCce----
Confidence 788999988 889999999887 56777889999999999974 599999999999999998876531
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEE
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYV 249 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 249 (621)
....+.+|...|.+++| ++++|++|+.||.|++||+++++.+..+.+|...|.++.|+ +++|
T Consensus 248 --------------~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l 309 (435)
T 1p22_A 248 --------------LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLV 309 (435)
T ss_dssp --------------EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEE
T ss_pred --------------eeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEE
Confidence 12567789999999999 78899999999999999999999999999999999999995 7899
Q ss_pred EEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCc
Q psy15549 250 ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRK 329 (621)
Q Consensus 250 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~ 329 (621)
++|+.||.|++||+++++.+..+..+ ...|.+++| ++.+|
T Consensus 310 ~~g~~dg~i~iwd~~~~~~~~~~~~h-----------------------~~~v~~~~~--~~~~l--------------- 349 (435)
T 1p22_A 310 VSGSSDNTIRLWDIECGACLRVLEGH-----------------------EELVRCIRF--DNKRI--------------- 349 (435)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCC-----------------------SSCEEEEEC--CSSEE---------------
T ss_pred EEEeCCCeEEEEECCCCCEEEEEeCC-----------------------cCcEEEEEe--cCCEE---------------
Confidence 99999999999999998877666422 334456665 44444
Q ss_pred ceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc-------
Q psy15549 330 PISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS------- 402 (621)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------- 402 (621)
++++.||.|++||+.++.
T Consensus 350 -------------------------------------------------------~sg~~dg~i~vwd~~~~~~~~~~~~ 374 (435)
T 1p22_A 350 -------------------------------------------------------VSGAYDGKIKVWDLVAALDPRAPAG 374 (435)
T ss_dssp -------------------------------------------------------EEEETTSCEEEEEHHHHTSTTSCTT
T ss_pred -------------------------------------------------------EEEeCCCcEEEEECCCCCCcccccc
Confidence 445567777777776544
Q ss_pred --eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcc
Q psy15549 403 --PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIP 449 (621)
Q Consensus 403 --~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~ 449 (621)
.+..+ .+|...|++++| ++++|++++.||.|++||+.++.....
T Consensus 375 ~~~~~~~-~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 375 TLCLRTL-VEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp TTEEEEE-CCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---------
T ss_pred chheeec-cCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 55555 469999999999 788999999999999999997765443
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=295.07 Aligned_cols=297 Identities=15% Similarity=0.213 Sum_probs=235.2
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc-CC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NG 93 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp-dg 93 (621)
....++++|+.. .++++|+.||.|+ ||++....... .....+.+|.+.|.+++|+| ++
T Consensus 36 ~~~~~~~~~~~~----~~~~~~~~~g~i~--------------v~~~~~~~~~~---~~~~~~~~h~~~V~~~~~~p~~~ 94 (402)
T 2aq5_A 36 DSGFCAVNPKFM----ALICEASGGGAFL--------------VLPLGKTGRVD---KNVPLVCGHTAPVLDIAWCPHND 94 (402)
T ss_dssp SSCSEEECSSEE----EEEBCCSSSCCEE--------------EEETTCCEECC---TTCCCBCCCSSCEEEEEECTTCT
T ss_pred CCCcEEECCCeE----EEEEEEcCCCEEE--------------EEECccCCCCC---CCCceEecCCCCEEEEEeCCCCC
Confidence 455688999875 3555689999999 88875543211 12335789999999999999 99
Q ss_pred CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCC-CEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 94 ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG-ELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 94 ~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
++|++|+ |+.|++|++..+............+.+|...|.+++|+|++ .+|++++.||.|++||+.+++.+
T Consensus 95 ~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~------- 167 (402)
T 2aq5_A 95 NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV------- 167 (402)
T ss_dssp TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE-------
T ss_pred CEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc-------
Confidence 9999998 88899999987642221113456778999999999999998 69999999999999999987643
Q ss_pred cccccccccceeeeeee--cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCcc-eEEEEEcCCCC
Q psy15549 172 LDEENVNKEHWIVTKIL--RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL-TEHKKF-VQGVAWDPKNQ 247 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~-v~~l~~sp~~~ 247 (621)
..+ ..|...|.+++|+|++++|++++.||.|++||+++++.+..+ ..|.+. +.+++|+|+++
T Consensus 168 --------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 168 --------------LTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK 233 (402)
T ss_dssp --------------EEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE
T ss_pred --------------EEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc
Confidence 455 689999999999999999999999999999999999999888 778776 89999999999
Q ss_pred EEEEE---eCCCcEEEEEccCcee-eeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccC
Q psy15549 248 YVATL---SSDRSLRTYSIQSKKV-ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLEN 323 (621)
Q Consensus 248 ~l~s~---~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~ 323 (621)
+|++| +.|+.|++||++++.. +.... ..+...+.+++|+|++++|++++
T Consensus 234 ~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~----------------------~~~~~~v~~~~~s~~~~~l~~~g----- 286 (402)
T 2aq5_A 234 ILTTGFSRMSERQVALWDTKHLEEPLSLQE----------------------LDTSSGVLLPFFDPDTNIVYLCG----- 286 (402)
T ss_dssp EEEEEECTTCCEEEEEEETTBCSSCSEEEE----------------------CCCCSSCEEEEEETTTTEEEEEE-----
T ss_pred EEEEeccCCCCceEEEEcCccccCCceEEe----------------------ccCCCceeEEEEcCCCCEEEEEE-----
Confidence 99998 7899999999987653 11111 12234567888888888776433
Q ss_pred CCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCce
Q psy15549 324 SDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP 403 (621)
Q Consensus 324 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 403 (621)
+.|+.|++||+.++++
T Consensus 287 ----------------------------------------------------------------~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 287 ----------------------------------------------------------------KGDSSIRYFEITSEAP 302 (402)
T ss_dssp ----------------------------------------------------------------TTCSCEEEEEECSSTT
T ss_pred ----------------------------------------------------------------cCCCeEEEEEecCCCc
Confidence 2578899999988874
Q ss_pred -eEEEec-ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcC
Q psy15549 404 -FAFIAN-IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 404 -~~~~~~-~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~ 446 (621)
+..+.. .|...|.+++|+|++.++++ .++.+++|++.++.+
T Consensus 303 ~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 303 FLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp CEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred ceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 333322 25689999999999998875 567999999998654
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-35 Score=286.80 Aligned_cols=258 Identities=21% Similarity=0.324 Sum_probs=204.1
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
..+..+|.++|++++|+|+++ +||+|+.|+.|+ |||+.++.. .....+.+|.+.|.
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~-----~lasgs~D~~v~--------------lwd~~~~~~-----~~~~~l~gH~~~V~ 61 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGT-----RLATCSSDRSVK--------------IFDVRNGGQ-----ILIADLRGHEGPVW 61 (316)
T ss_dssp --------CCEEEEEECGGGC-----EEEEEETTTEEE--------------EEEEETTEE-----EEEEEEECCSSCEE
T ss_pred eeecccccCeEEEeeEcCCCC-----EEEEEeCCCeEE--------------EEEecCCCc-----EEEEEEcCCCccEE
Confidence 345668999999999999998 999999999999 998876532 12345889999999
Q ss_pred EEEEcc--CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC--CCEEEEEeCCCcEEEEEccC
Q psy15549 86 VVRFSP--NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN--GELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 86 ~l~~sp--dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~--g~~l~s~s~dg~i~vwd~~~ 160 (621)
+++|++ ++++|++|+ |+.|++|++..+. ......+.+|...|.+++|+|+ +.+|++|+.|+.|++||+..
T Consensus 62 ~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~-----~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 62 QVAWAHPMYGNILASCSYDRKVIIWREENGT-----WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp EEEECCGGGSSCEEEEETTSCEEEECCSSSC-----CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred EEEeCCCCCCCEEEEEECCCEEEEEECCCCc-----ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 999986 489999988 8999999998652 1344567789999999999997 78999999999999999986
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-----------------CCEEEEEeCCCeEEEEECCC
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-----------------STHLISGSVDNTAIMWDVHK 223 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-----------------~~~l~s~~~dg~i~vwd~~~ 223 (621)
.... .....+.+|...|.+++|+|+ +++|++|+.|+.|++||++.
T Consensus 137 ~~~~------------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~ 198 (316)
T 3bg1_A 137 EGQW------------------EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE 198 (316)
T ss_dssp SSCE------------------EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT
T ss_pred CCCc------------------ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCC
Confidence 5321 112445689999999999997 47899999999999999975
Q ss_pred C---cEEEEeccCCcceEEEEEcCCC----CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccC
Q psy15549 224 G---KNLGILTEHKKFVQGVAWDPKN----QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDD 296 (621)
Q Consensus 224 ~---~~~~~~~~~~~~v~~l~~sp~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (621)
. +++..+.+|...|.+++|+|++ .+|++++.|++|++|++.+....... .....
T Consensus 199 ~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~-------------------~~~~~ 259 (316)
T 3bg1_A 199 DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWS-------------------PKLLH 259 (316)
T ss_dssp TSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCB-------------------CCEEE
T ss_pred CCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchh-------------------hhhhh
Confidence 5 4667788999999999999986 88999999999999998763110000 00001
Q ss_pred CcccceeeeeecCCCCeEEeccccccCCCCCCcceeee
Q psy15549 297 TMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 297 ~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
.+...|.+++|+|++++|++++ .|+.+++|+..
T Consensus 260 ~~~~~v~~v~~sp~g~~las~~-----~D~~v~lw~~~ 292 (316)
T 3bg1_A 260 KFNDVVWHVSWSITANILAVSG-----GDNKVTLWKES 292 (316)
T ss_dssp ECSSCEEEEEECTTTCCEEEEE-----SSSCEEEEEEC
T ss_pred cCCCcEEEEEEcCCCCEEEEEc-----CCCeEEEEEEC
Confidence 2345789999999999999999 89999999864
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-36 Score=310.33 Aligned_cols=340 Identities=9% Similarity=-0.005 Sum_probs=242.9
Q ss_pred ccCcEEEEEEccCC---------CEEEEE-------------------c-CCceEEEEeccCccccccceecccccccCC
Q psy15549 80 HQKAVNVVRFSPNG---------ELLASG-------------------D-DVGKEIWYLTERESGIANVEFASDLSRHQK 130 (621)
Q Consensus 80 h~~~V~~l~~spdg---------~~las~-------------------~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~ 130 (621)
+.+.|.+|+|+|++ ++||+| + |+.|+||++..+... ......+.+|.+
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~---~~~~~~l~~~~~ 208 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLH---CVKVQTIVHSFG 208 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCC---EEEEEEEEECCC
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCC---ceEEEEEEecCC
Confidence 46678888888765 566653 3 567999999765311 111234567889
Q ss_pred CeEEEEECCC------CCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC
Q psy15549 131 AVNVVRFSPN------GELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS 204 (621)
Q Consensus 131 ~V~~i~~sp~------g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~ 204 (621)
.|.+++|+|+ +.+||+++.||+|+|||+..+....... . ..-.....+.+|...|++++|++++
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~--------~--~~~~p~~~l~~h~~~v~sv~~s~~~ 278 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF--------K--MCEKPSLTLSLADSLITTFDFLSPT 278 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE--------E--CCCSCSEEECCTTTCEEEEEESSSS
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc--------e--eecCceEEEEcCCCCEEEEEecCCC
Confidence 9999999996 5799999999999999998764321000 0 0000124567899999999999864
Q ss_pred CEEEEEeCCCeEEEEECCCCc-EEEEeccCCcceEEE--EEcCCC-CEEEEEeCCCcEEEEEccCceeeeecccCCCCCC
Q psy15549 205 THLISGSVDNTAIMWDVHKGK-NLGILTEHKKFVQGV--AWDPKN-QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVD 280 (621)
Q Consensus 205 ~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~l--~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 280 (621)
.|++|+.||+|++||++++. +...+.+|...|.++ +|+|++ .+|++++.|++|+|||+++++.+..+..+.
T Consensus 279 -~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~---- 353 (524)
T 2j04_B 279 -TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF---- 353 (524)
T ss_dssp -EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC----
T ss_pred -eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc----
Confidence 89999999999999998764 456678999999999 578888 899999999999999999877654443211
Q ss_pred CccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeee
Q psy15549 281 SSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVK 360 (621)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (621)
....|.+++|+|+++.+++++ .|+++++|++... .....+.+|...+.++.
T Consensus 354 -----------------~~~~v~~v~fsp~~~~l~s~~-----~d~tv~lwd~~~~-------~~~~~l~gH~~~V~sva 404 (524)
T 2j04_B 354 -----------------RGSNLVPVVYCPQIYSYIYSD-----GASSLRAVPSRAA-------FAVHPLVSRETTITAIG 404 (524)
T ss_dssp -----------------SCCSCCCEEEETTTTEEEEEC-----SSSEEEEEETTCT-------TCCEEEEECSSCEEEEE
T ss_pred -----------------ccCcccceEeCCCcCeEEEeC-----CCCcEEEEECccc-------ccceeeecCCCceEEEE
Confidence 011357899999999999988 7899999987642 22234567888999999
Q ss_pred ccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEec----ccccceEEEEEcCCCCeEEEEeCCCcE
Q psy15549 361 CCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIAN----IHYTKLTDITWSSDGKVLIASSTDGYC 436 (621)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~h~~~v~~~~~spdg~~l~s~s~dg~i 436 (621)
|+| ++..|++++.|++|++||+... .+..... .+...|.+++|+|+|+.+. ... .+
T Consensus 405 ~Sp----------------~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~--~~ 464 (524)
T 2j04_B 405 VSR----------------LHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDS--SY 464 (524)
T ss_dssp CCS----------------SCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEE-ECC--CC
T ss_pred eCC----------------CCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEE-ccC--Cc
Confidence 988 6788999999999999998764 2221100 0122578999999998553 322 34
Q ss_pred EEEEec-CCcCCcccCCCCCcccccCCCCCCC---CcccCCCcccHHHhcccCc
Q psy15549 437 SIISFG-DNEIGIPYVPPSGEESKENDPTKGE---PVRSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 437 ~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~w~~~~~ 486 (621)
.+|... ++.+...+.+|...+..+.|+|++. .+++++.+|.|++|++.++
T Consensus 465 ~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 465 EVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred eecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 455443 5677888999999999999999965 8899999999999998765
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-35 Score=290.57 Aligned_cols=300 Identities=14% Similarity=0.090 Sum_probs=223.8
Q ss_pred cCcEEEEEEccCCCEEEEEcC--------CceEEEEeccCccccc-cc--eecccccccCCCeEEEEECCCCCEEEEE--
Q psy15549 81 QKAVNVVRFSPNGELLASGDD--------VGKEIWYLTERESGIA-NV--EFASDLSRHQKAVNVVRFSPNGELLASG-- 147 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~d--------~~v~iw~~~~~~~~~~-~~--~~~~~~~~h~~~V~~i~~sp~g~~l~s~-- 147 (621)
..+|++++|+|||++|++|+. +.|++|++........ .+ .....+.+|...|.+++++ ++.+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 458999999999999999862 2489999976543211 01 1122467788889888774 5566665
Q ss_pred ---------eCCCcEEEEEccCCCCCCCCCCCCcccccccccceee--eeeecCCCCCeEEEEECCCCCEEEEEe--CCC
Q psy15549 148 ---------DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIV--TKILRGHLEDVYDISWSPTSTHLISGS--VDN 214 (621)
Q Consensus 148 ---------s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~i~~spd~~~l~s~~--~dg 214 (621)
+.|+.+++|++........+ ... ......+...+.+++|+|||++|++++ .|+
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~ 157 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEF--------------LTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPA 157 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEE--------------EEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSC
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEE--------------eeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCC
Confidence 35778999998765432110 000 011234556789999999999987554 689
Q ss_pred eEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccc
Q psy15549 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFH 294 (621)
Q Consensus 215 ~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (621)
+|+|||+.+++++..+. |...|.+++|+|+|++|++++.+ .+.+|+..++..+....
T Consensus 158 ~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~--------------------- 214 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKT--------------------- 214 (365)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEEC---------------------
T ss_pred EEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeee---------------------
Confidence 99999999999998885 77889999999999999998755 56777776766543321
Q ss_pred cCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCC
Q psy15549 295 DDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDK 374 (621)
Q Consensus 295 ~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (621)
...+...|.+++|+|+++++++++ .++..
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s-----~d~~~---------------------------------------------- 243 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAAS-----LKKGK---------------------------------------------- 243 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEE-----ESSSC----------------------------------------------
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEe-----cCCcc----------------------------------------------
Confidence 123455678999999999988876 22110
Q ss_pred CCccCCCcEEEEEEcCCcEEEEeCCCCcee----EEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcc-
Q psy15549 375 PLFKLPYRIVIAVATENNILLYDTQHASPF----AFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIP- 449 (621)
Q Consensus 375 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~- 449 (621)
...+++|++...... ..+ .+|...|++++|+|||++||+|+.|++|+|||+.+++++..
T Consensus 244 ---------------~~~i~~~~~~~~~~~~~~~~~~-~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 244 ---------------GIVLTKISIKSGNTSVLRSKQV-TNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp ---------------CEEEEEEEEETTEEEEEEEEEE-ESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ---------------eeEEeecccccceecceeeeee-cCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe
Confidence 114566776655422 223 46889999999999999999999999999999999998876
Q ss_pred cCCCCCcccccCCCCCCCCcccCCCcccHHHhcccCc
Q psy15549 450 YVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~~ 486 (621)
+.+|...++.+.|+|+|+.+++++.|++|++|+++..
T Consensus 308 ~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 308 KQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 5789999999999999999999999999999998654
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=289.45 Aligned_cols=286 Identities=16% Similarity=0.231 Sum_probs=239.5
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
.++.|+||++ ++||+|.|+.|+||+..++.. .....+.+|...|++++|+|+|++||+|+.||.|+|||+.+++
T Consensus 107 y~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~-----~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVALDNSVYLWSASSGDI-----LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp TCBCEEECTT-SEEEEEETTEEEEEETTTCCE-----EEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred cceeEEECCC-CEEEEEeCCEEEEEECCCCCE-----EEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence 4678999975 589999999999999988721 2333456788899999999999999999999999999999887
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC-cEEEEeccCCcceEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG-KNLGILTEHKKFVQGVA 241 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~l~ 241 (621)
.+ ..+.+|...+.+++++ +.+|++|+.|+.+++||.... ..+..+.+|...+..+.
T Consensus 181 ~~---------------------~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~ 237 (420)
T 4gga_A 181 RL---------------------RNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR 237 (420)
T ss_dssp EE---------------------EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEE
T ss_pred EE---------------------EEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeee
Confidence 53 6678999999998885 679999999999999998864 45677889999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccc
Q psy15549 242 WDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCL 321 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~ 321 (621)
|+|+++++++++.|+.+++|+..+++..... +.....+...|.+++|+|++..+++..
T Consensus 238 ~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~-------------------~~~~~~~~~~V~~~~~~p~~~~~la~~--- 295 (420)
T 4gga_A 238 WAPDGRHLASGGNDNLVNVWPSAPGEGGWVP-------------------LQTFTQHQGAVKAVAWCPWQSNVLATG--- 295 (420)
T ss_dssp ECTTSSEEEEEETTSCEEEEESSCCSSCSCC-------------------SEEECCCSSCEEEEEECTTCTTEEEEE---
T ss_pred ecCCCCeeeeeeccccceEEeecccccccee-------------------eeeecccCCceeeeeeCCCcccEEEEE---
Confidence 9999999999999999999999876532111 112234556678888888765544321
Q ss_pred cCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC
Q psy15549 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA 401 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 401 (621)
.++.|+.|++||+.++
T Consensus 296 ----------------------------------------------------------------~gs~D~~I~iwd~~t~ 311 (420)
T 4gga_A 296 ----------------------------------------------------------------GGTSDRHIRIWNVCSG 311 (420)
T ss_dssp ----------------------------------------------------------------ECTTTCEEEEEETTTT
T ss_pred ----------------------------------------------------------------eecCCCEEEEEeCCcc
Confidence 1236899999999999
Q ss_pred ceeEEEecccccceEEEEEcCCCCeEEEEe--CCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHH
Q psy15549 402 SPFAFIANIHYTKLTDITWSSDGKVLIASS--TDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAE 479 (621)
Q Consensus 402 ~~~~~~~~~h~~~v~~~~~spdg~~l~s~s--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 479 (621)
+.+..+. +...+.++.|+|+++.|++++ .||.|+|||+.+++.+..+.+|...+..+.|+|+|..+++++.|+.|+
T Consensus 312 ~~~~~~~--~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 312 ACLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp EEEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred ccceeec--cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 9888874 456899999999999998875 799999999999999999999999999999999999999999999999
Q ss_pred HhcccC
Q psy15549 480 QAKGEG 485 (621)
Q Consensus 480 ~w~~~~ 485 (621)
+|++.+
T Consensus 390 iWdv~~ 395 (420)
T 4gga_A 390 LWRCFE 395 (420)
T ss_dssp EECCSC
T ss_pred EEECCC
Confidence 998654
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=282.94 Aligned_cols=258 Identities=17% Similarity=0.263 Sum_probs=208.6
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC--CCEEEEEeCC
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN--GELLASGDDE 150 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~--g~~l~s~s~d 150 (621)
...+.+|.+.|++++|+|++++|++|+ |+.|++|++.... ......+.+|...|++++|+++ +++|++|+.|
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d 78 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD 78 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc-----ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC
Confidence 345889999999999999999999998 8889999998432 2566778899999999999987 8999999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEECCCCc--E
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT--STHLISGSVDNTAIMWDVHKGK--N 226 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd--~~~l~s~~~dg~i~vwd~~~~~--~ 226 (621)
|.|++||+.+++. .....+..|...|.+++|+|+ +.+|++++.|+.|++||+.++. .
T Consensus 79 g~v~iwd~~~~~~-------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 139 (379)
T 3jrp_A 79 GKVLIWKEENGRW-------------------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS 139 (379)
T ss_dssp SCEEEEEEETTEE-------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC
T ss_pred CEEEEEEcCCCce-------------------eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee
Confidence 9999999988752 123566789999999999999 9999999999999999998873 4
Q ss_pred EEEeccCCcceEEEEEcC-------------CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccccccc
Q psy15549 227 LGILTEHKKFVQGVAWDP-------------KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLF 293 (621)
Q Consensus 227 ~~~~~~~~~~v~~l~~sp-------------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (621)
...+..|...|.+++|+| ++.+|++++.||.|++||++++.....+. .
T Consensus 140 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------------~ 200 (379)
T 3jrp_A 140 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE-------------------S 200 (379)
T ss_dssp EEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEE-------------------E
T ss_pred eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeE-------------------E
Confidence 456678999999999999 69999999999999999998754321110 0
Q ss_pred ccCCcccceeeeeecCC---CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCC
Q psy15549 294 HDDTMKSFFRRLTFSPD---GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKP 370 (621)
Q Consensus 294 ~~~~~~~~i~~~~~spd---g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (621)
....+...|.+++|+|+ +.+|++
T Consensus 201 ~~~~h~~~v~~~~~sp~~~~~~~l~s------------------------------------------------------ 226 (379)
T 3jrp_A 201 TLEGHSDWVRDVAWSPTVLLRSYLAS------------------------------------------------------ 226 (379)
T ss_dssp EECCCSSCEEEEEECCCCSSSEEEEE------------------------------------------------------
T ss_pred EEecccCcEeEEEECCCCCCCCeEEE------------------------------------------------------
Confidence 11234556788888888 555554
Q ss_pred CCCCCCccCCCcEEEEEEcCCcEEEEeCCCCcee--EEEe--cccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 371 SDDKPLFKLPYRIVIAVATENNILLYDTQHASPF--AFIA--NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 371 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~--~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
++.||.|++||+.++... ..+. ..|...|++++|+|+|++|++++.||.|++|++..+
T Consensus 227 ----------------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 227 ----------------VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp ----------------EETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred ----------------EeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 456788888888776421 1111 247889999999999999999999999999999854
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=284.83 Aligned_cols=282 Identities=12% Similarity=0.076 Sum_probs=232.2
Q ss_pred cccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCC-EEEEEeCCCcEE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE-LLASGDDESTII 154 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~-~l~s~s~dg~i~ 154 (621)
..+|.+.|.+++|+|++++|++++ |+.|++|++...... .....+.+|...|.+++|+|+++ +|++|+.||.|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL 82 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc----ccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEE
Confidence 468999999999999999999987 888999999876311 12344558999999999999999 999999999999
Q ss_pred EEEc-cCCCCCCCCCCCCcccccccccceeeeeeecC--CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC--------
Q psy15549 155 VWKQ-KTDQDLPEFPSSNLDEENVNKEHWIVTKILRG--HLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK-------- 223 (621)
Q Consensus 155 vwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~-------- 223 (621)
+||+ .++.. ..+.+ |...|.+++|+| +++|++++.|+.|++||+++
T Consensus 83 ~wd~~~~~~~----------------------~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 139 (342)
T 1yfq_A 83 KVDLIGSPSF----------------------QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAV 139 (342)
T ss_dssp EECSSSSSSE----------------------EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEE
T ss_pred EEEeccCCce----------------------EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccc
Confidence 9999 77652 45667 999999999999 99999999999999999987
Q ss_pred -CcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccC-ceeeeecccCCCCCCCccccccccccccccCCcccc
Q psy15549 224 -GKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQS-KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSF 301 (621)
Q Consensus 224 -~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (621)
++++..+. |...|.+++|+|++ |++++.|+.|++||+++ +...... ....+...
T Consensus 140 ~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~---------------------~~~~~~~~ 195 (342)
T 1yfq_A 140 KNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTI---------------------EESGLKYQ 195 (342)
T ss_dssp EESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEE---------------------EECSCSSC
T ss_pred cCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCcccccccee---------------------eecCCCCc
Confidence 77666665 88999999999887 89999999999999987 4421111 01133456
Q ss_pred eeeeeecC-CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCC
Q psy15549 302 FRRLTFSP-DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLP 380 (621)
Q Consensus 302 i~~~~~sp-dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (621)
+.+++|+| +++++++++
T Consensus 196 i~~i~~~~~~~~~l~~~~-------------------------------------------------------------- 213 (342)
T 1yfq_A 196 IRDVALLPKEQEGYACSS-------------------------------------------------------------- 213 (342)
T ss_dssp EEEEEECSGGGCEEEEEE--------------------------------------------------------------
T ss_pred eeEEEECCCCCCEEEEEe--------------------------------------------------------------
Confidence 78899998 887776655
Q ss_pred CcEEEEEEcCCcEEEEeCCCC------ceeEEEecccc---------cceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 381 YRIVIAVATENNILLYDTQHA------SPFAFIANIHY---------TKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 381 ~~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~h~---------~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
.||.|++|++... +....+. .|. ..|++++|+|++++|++++.||.|++||+.+++
T Consensus 214 --------~dg~i~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 214 --------IDGRVAVEFFDDQGDDYNSSKRFAFR-CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp --------TTSEEEEEECCTTCCSTTCTTCEEEE-CCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred --------cCCcEEEEEEcCCCcccccccceeee-cccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 5677777777665 5555553 354 499999999999999999999999999999999
Q ss_pred CCcccCCC-CCcccccCCCCCCCCcccCCCccc-HHHhc
Q psy15549 446 IGIPYVPP-SGEESKENDPTKGEPVRSEDKPRS-AEQAK 482 (621)
Q Consensus 446 ~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~-~~~w~ 482 (621)
....+..+ ...+..+. +++..+++++.|+. .+.+.
T Consensus 285 ~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 285 KIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred HhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 99999888 88888777 99999999999998 55554
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=285.25 Aligned_cols=286 Identities=16% Similarity=0.252 Sum_probs=236.9
Q ss_pred ccccCc--EEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccc-cCCCeEEEEECCCCCEEEEEeCCCcEE
Q psy15549 78 SRHQKA--VNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSR-HQKAVNVVRFSPNGELLASGDDESTII 154 (621)
Q Consensus 78 ~~h~~~--V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~i~~sp~g~~l~s~s~dg~i~ 154 (621)
.+|... +.+++|++ +.+++++.++.|++|++..+ .....+.. |...|.+++|+|++++|++|+.||.|+
T Consensus 88 ~~~~~~~~~~~~~~s~-~~l~~~~~d~~v~lw~~~~~-------~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~ 159 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN-LNVVAVALERNVYVWNADSG-------SVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVD 159 (401)
T ss_dssp TTCCCCTTCBCEEECT-TSEEEEEETTEEEEEETTTC-------CEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCcCCceEEEEeecC-CCEEEEECCCeEEEeeCCCC-------cEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEE
Confidence 355544 45577775 44566666999999999876 33333333 889999999999999999999999999
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC-CCcEEEEeccC
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH-KGKNLGILTEH 233 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~ 233 (621)
+||+.+++.+ ..+.+|...|.+++| ++.+|++++.||.|++||++ ....+..+..|
T Consensus 160 iwd~~~~~~~---------------------~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 216 (401)
T 4aez_A 160 IYDVESQTKL---------------------RTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGH 216 (401)
T ss_dssp EEETTTCCEE---------------------EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EEECcCCeEE---------------------EEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCC
Confidence 9999888743 667799999999999 46799999999999999998 56678888899
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
...|.+++|+|++++|++++.||.|++||+++++.+..+. .+...|.+++|+|++..
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-----------------------~~~~~v~~~~~~p~~~~ 273 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT-----------------------NHNAAVKAVAWCPWQSN 273 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC-----------------------CCSSCCCEEEECTTSTT
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec-----------------------CCcceEEEEEECCCCCC
Confidence 9999999999999999999999999999999887766654 23455789999998765
Q ss_pred EEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcE
Q psy15549 314 LIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNI 393 (621)
Q Consensus 314 l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 393 (621)
+++.++ ++.|+.|
T Consensus 274 ll~~~~-------------------------------------------------------------------gs~d~~i 286 (401)
T 4aez_A 274 LLATGG-------------------------------------------------------------------GTMDKQI 286 (401)
T ss_dssp EEEEEC-------------------------------------------------------------------CTTTCEE
T ss_pred EEEEec-------------------------------------------------------------------CCCCCEE
Confidence 544320 1258999
Q ss_pred EEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEe--CCCcEEEEEecCCcCCcc--cCCCCCcccccCCCCCCCCc
Q psy15549 394 LLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASS--TDGYCSIISFGDNEIGIP--YVPPSGEESKENDPTKGEPV 469 (621)
Q Consensus 394 ~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s--~dg~i~iw~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 469 (621)
++||+.+++.+..+. +...|.+++|+|+|++|++++ .||.|++|++.++..... +..|...+..+.+++++..+
T Consensus 287 ~i~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l 364 (401)
T 4aez_A 287 HFWNAATGARVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRIL 364 (401)
T ss_dssp EEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEE
T ss_pred EEEECCCCCEEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEE
Confidence 999999999888884 667899999999999999954 899999999998765544 56788899999999999999
Q ss_pred ccCCCcccHHHhcccCc
Q psy15549 470 RSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 470 ~s~~~~~~~~~w~~~~~ 486 (621)
++++.|+.+++|++...
T Consensus 365 ~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 365 STAASDENLKFWRVYDG 381 (401)
T ss_dssp EEECTTSEEEEEECCC-
T ss_pred EEEeCCCcEEEEECCCC
Confidence 99999999999997644
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-33 Score=277.06 Aligned_cols=300 Identities=13% Similarity=0.155 Sum_probs=226.4
Q ss_pred ceeeecCCCCeEEEecccc---ccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccC
Q psy15549 6 PEISWHNRDPVLSVDIQLK---QEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK 82 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd---~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~ 82 (621)
..+..+|.+.|++|+|+|+ |+ +|++|+.||.|+ ||++.+.... ....+.+|..
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~-----~l~~~~~dg~i~--------------iw~~~~~~~~-----~~~~~~~h~~ 87 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGN-----FLIAGSWANDVR--------------CWEVQDSGQT-----IPKAQQMHTG 87 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSE-----EEEEEETTSEEE--------------EEEECTTSCE-----EEEEEEECSS
T ss_pred eEeccCCCCceEEEEEcCCCCCce-----EEEEECCCCcEE--------------EEEcCCCCce-----eEEEeccccC
Confidence 4556789999999999999 57 999999999999 9998863221 1235788999
Q ss_pred cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEE--CCCCCEEEEEeCCCcEEEEEcc
Q psy15549 83 AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRF--SPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~--sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
.|.+++|+|++++|++++ |+.|++|++..+ ... .+..|...|.+++| +|++.+|++++.||.|++||+.
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-------~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSSN-------QAI-QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTT-------EEE-EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCCC-------Cce-eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 999999999999999988 888999999876 323 35679999999999 8999999999999999999999
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe--ccCCcce
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL--TEHKKFV 237 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~v 237 (621)
+++.+ ..+..+. .+.++.+.+ ..+++++.++.+.+|++......... ..+...+
T Consensus 160 ~~~~~---------------------~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 215 (368)
T 3mmy_A 160 SSNPM---------------------MVLQLPE-RCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH 215 (368)
T ss_dssp CSSCS---------------------EEEECSS-CEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCE
T ss_pred CCcEE---------------------EEEecCC-CceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCC
Confidence 88764 3334443 567777764 47888999999999999876544332 2234456
Q ss_pred EEEEEcCCCCE----EEEEeCCCcEEEEEccCce---eeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 238 QGVAWDPKNQY----VATLSSDRSLRTYSIQSKK---VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 238 ~~l~~sp~~~~----l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
.++++.++... +++++.||.|++||++... .+..+..+..... ......+...|.+++|+|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~v~~~~~sp~ 284 (368)
T 3mmy_A 216 RCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGT-----------NTSAPQDIYAVNGIAFHPV 284 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC---------------CCCEEECCEEEEEECTT
T ss_pred ceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccc-----------cccccccccceEEEEEecC
Confidence 66666665544 9999999999999998763 2333322211000 0001112224677777777
Q ss_pred CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 311 g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
+++|++ ++.|
T Consensus 285 ~~~l~s----------------------------------------------------------------------~~~d 294 (368)
T 3mmy_A 285 HGTLAT----------------------------------------------------------------------VGSD 294 (368)
T ss_dssp TCCEEE----------------------------------------------------------------------EETT
T ss_pred CCEEEE----------------------------------------------------------------------EccC
Confidence 666655 4478
Q ss_pred CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
|.|++||+.+++.+..+. +|...|++++|+|+|++|++++.|+..+.|++.+
T Consensus 295 g~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 295 GRFSFWDKDARTKLKTSE-QLDQPISACCFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp SCEEEEETTTTEEEEECC-CCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred CeEEEEECCCCcEEEEec-CCCCCceEEEECCCCCeEEEEecccccccccccC
Confidence 999999999999888874 6999999999999999999999998666655443
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=277.43 Aligned_cols=259 Identities=21% Similarity=0.354 Sum_probs=216.8
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
..+..+|.++|++++|+|+++ +||+|+.||.|+ ||++.... ......+.+|...|+
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~-----~l~~~~~dg~i~--------------iw~~~~~~-----~~~~~~~~~h~~~v~ 59 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGK-----RLATCSSDKTIK--------------IFEVEGET-----HKLIDTLTGHEGPVW 59 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSS-----EEEEEETTSCEE--------------EEEEETTE-----EEEEEEECCCSSCEE
T ss_pred cEEecCCcccEEEEEEcCCCC-----EEEEEECCCcEE--------------EEecCCCc-----ceeeeEecCCCCcEE
Confidence 456778999999999999998 999999999999 99887432 123445789999999
Q ss_pred EEEEccC--CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC--CCEEEEEeCCCcEEEEEccC
Q psy15549 86 VVRFSPN--GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN--GELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 86 ~l~~spd--g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~--g~~l~s~s~dg~i~vwd~~~ 160 (621)
+++|+++ +++|++++ |+.|++|++..+. ......+..|...|.+++|+|+ +.+|++++.|+.|++||+.+
T Consensus 60 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 60 RVDWAHPKFGTILASCSYDGKVLIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE 134 (379)
T ss_dssp EEEECCGGGCSEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCT
T ss_pred EEEeCCCCCCCEEEEeccCCEEEEEEcCCCc-----eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCC
Confidence 9999987 99999988 8899999998862 1356677889999999999999 99999999999999999988
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-------------CCCEEEEEeCCCeEEEEECCCCc--
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-------------TSTHLISGSVDNTAIMWDVHKGK-- 225 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-------------d~~~l~s~~~dg~i~vwd~~~~~-- 225 (621)
..... ...+..|...|.+++|+| ++.+|++++.||.|++||++++.
T Consensus 135 ~~~~~-------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 135 NGTTS-------------------PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT 195 (379)
T ss_dssp TSCCC-------------------EEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE
T ss_pred CCcee-------------------eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc
Confidence 75431 245678999999999999 69999999999999999998764
Q ss_pred --EEEEeccCCcceEEEEEcCC---CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCccc
Q psy15549 226 --NLGILTEHKKFVQGVAWDPK---NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKS 300 (621)
Q Consensus 226 --~~~~~~~~~~~v~~l~~sp~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (621)
....+..|...|.+++|+|+ +++|++++.||.|++||++++...... .......+..
T Consensus 196 ~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------------------~~~~~~~~~~ 257 (379)
T 3jrp_A 196 YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKK------------------TLLKEEKFPD 257 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEE------------------EESSSSCCSS
T ss_pred eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcccee------------------eeeccccCCC
Confidence 45677889999999999999 899999999999999999886421110 0112233566
Q ss_pred ceeeeeecCCCCeEEeccccccCCCCCCcceeeee
Q psy15549 301 FFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTH 335 (621)
Q Consensus 301 ~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~ 335 (621)
.|.+++|+|+|++|++++ .|+.+++|++..
T Consensus 258 ~v~~~~~s~~g~~l~~~~-----~dg~i~iw~~~~ 287 (379)
T 3jrp_A 258 VLWRASWSLSGNVLALSG-----GDNKVTLWKENL 287 (379)
T ss_dssp CEEEEEECSSSCCEEEEE-----SSSSEEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEec-----CCCcEEEEeCCC
Confidence 789999999999999998 899999999873
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=284.67 Aligned_cols=324 Identities=15% Similarity=0.143 Sum_probs=243.1
Q ss_pred ceeEEeccccccccceeeccccccccCcEEEEEEcc-CCCEEEEEc-CCceEEEEeccCccccccc-e-----ecccccc
Q psy15549 56 GKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGD-DVGKEIWYLTERESGIANV-E-----FASDLSR 127 (621)
Q Consensus 56 ~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~-~-----~~~~~~~ 127 (621)
+++|++....... .+.+|.+.|++++|+| ++++|++|+ |+.|++|++.......... . ......+
T Consensus 25 ~~v~~~~~~~~~~-------~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
T 4a11_B 25 RRVLGLELNKDRD-------VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDV 97 (408)
T ss_dssp HHHHTEEECTTEE-------ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTC
T ss_pred ceeeccccCccee-------eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccccccccccccc
Confidence 3488887665543 3788999999999999 999999988 8889999998764211100 0 0111135
Q ss_pred cCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC---
Q psy15549 128 HQKAVNVVRFSP-NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT--- 203 (621)
Q Consensus 128 h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd--- 203 (621)
|...|.+++|+| ++.+|++++.||.|++||+.+++.. .. ..+...+.++.|+|.
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---------------------~~-~~~~~~~~~~~~~~~~~~ 155 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA---------------------DV-FNFEETVYSHHMSPVSTK 155 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE---------------------EE-EECSSCEEEEEECSSCSS
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc---------------------ee-ccCCCceeeeEeecCCCC
Confidence 999999999999 7789999999999999999987643 22 237788999999984
Q ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC-EEEEEeCCCcEEEEEccCce-eeeecccCCCCCCC
Q psy15549 204 STHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ-YVATLSSDRSLRTYSIQSKK-VISRACRSKLPVDS 281 (621)
Q Consensus 204 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~-~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~ 281 (621)
+.++++++.+|.|++||+.+++.+..+..|...|.+++|+|+++ .|++++.||.|++||++++. .+..+..+....
T Consensus 156 ~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-- 233 (408)
T 4a11_B 156 HCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKK-- 233 (408)
T ss_dssp CCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCS--
T ss_pred CcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccccccc--
Confidence 45999999999999999999999999999999999999999998 58899999999999998765 333332111100
Q ss_pred ccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeec
Q psy15549 282 SHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKC 361 (621)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (621)
..........+...|.+++|+|++++|+++
T Consensus 234 ------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-------------------------------------------- 263 (408)
T 4a11_B 234 ------SQAVESANTAHNGKVNGLCFTSDGLHLLTV-------------------------------------------- 263 (408)
T ss_dssp ------CCCTTTSSCSCSSCEEEEEECTTSSEEEEE--------------------------------------------
T ss_pred ------ceeeccccccccCceeEEEEcCCCCEEEEe--------------------------------------------
Confidence 000111223445566777777776666554
Q ss_pred cceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEec----ccccceEEEEEcCCCCeEEEEeCCCcEE
Q psy15549 362 CPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIAN----IHYTKLTDITWSSDGKVLIASSTDGYCS 437 (621)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~h~~~v~~~~~spdg~~l~s~s~dg~i~ 437 (621)
+.|+.|++||+.+++....... .....+........+..+++++.|+.|+
T Consensus 264 --------------------------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 317 (408)
T 4a11_B 264 --------------------------GTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIA 317 (408)
T ss_dssp --------------------------ETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEE
T ss_pred --------------------------cCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEE
Confidence 4677888888877765443321 1112222223334455677788899999
Q ss_pred EEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhcccCc
Q psy15549 438 IISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 438 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~~ 486 (621)
+||+.+++....+..|...+..+.+++++..+++++.|+.+++|++...
T Consensus 318 v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 318 VYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred EEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 9999999999999999999999999999999999999999999997654
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=270.12 Aligned_cols=285 Identities=16% Similarity=0.221 Sum_probs=234.9
Q ss_pred EEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 84 VNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 84 V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
.++|+||+++ +||+|.|+.|+|||+.++.. .....+.+|...|++++|+|++++|++|+.||+|++||+.+++.
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~-----~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDI-----LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 101 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCE-----EEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCE-----EEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee
Confidence 5789999986 88888899999999988721 22234567888999999999999999999999999999998875
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC-cEEEEeccCCcceEEEEE
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG-KNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~l~~ 242 (621)
+ ..+.+|...+.++.+ ++..+++++.++.+++|+.... ..+..+.+|...+..+.+
T Consensus 102 ~---------------------~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (318)
T 4ggc_A 102 L---------------------RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW 158 (318)
T ss_dssp E---------------------EEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred E---------------------EEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEE
Confidence 3 667789988887665 4679999999999999998875 456677889999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
++++++|++++.|+.|++||+++++...... .....+...|.+++++|++..++.
T Consensus 159 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-------------------~~~~~~~~~v~~~~~~~~~~~~~~------ 213 (318)
T 4ggc_A 159 APDGRHLASGGNDNLVNVWPSAPGEGGWVPL-------------------QTFTQHQGAVKAVAWCPWQSNVLA------ 213 (318)
T ss_dssp CTTSSEEEEEETTSCEEEEESSCBTTBSCCS-------------------EEECCCCSCEEEEEECTTSTTEEE------
T ss_pred cCCCCEEEEEecCcceeEEECCCCcccccce-------------------eeecccCCceEEEEecCCCCcEEE------
Confidence 9999999999999999999998765332211 112233455677778777654432
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
+++++.++.|++||.....
T Consensus 214 -------------------------------------------------------------~~~~~~~~~i~lwd~~~~~ 232 (318)
T 4ggc_A 214 -------------------------------------------------------------TGGGTSDRHIRIWNVCSGA 232 (318)
T ss_dssp -------------------------------------------------------------EEECTTTCEEEEEETTTCC
T ss_pred -------------------------------------------------------------EEecCCCCEEEEEeccccc
Confidence 1223467899999999988
Q ss_pred eeEEEecccccceEEEEEcCCCCeEEEEe--CCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHH
Q psy15549 403 PFAFIANIHYTKLTDITWSSDGKVLIASS--TDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQ 480 (621)
Q Consensus 403 ~~~~~~~~h~~~v~~~~~spdg~~l~s~s--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 480 (621)
...... +...+..++|+|++..+++++ .||.|++||+.+++++..+.+|...+..+.|+|++..+++++.|+.|++
T Consensus 233 ~~~~~~--~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~i 310 (318)
T 4ggc_A 233 CLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRL 310 (318)
T ss_dssp EEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEE
T ss_pred cccccc--ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEE
Confidence 776653 677899999999999888765 7999999999999999999999999999999999999999999999999
Q ss_pred hcccC
Q psy15549 481 AKGEG 485 (621)
Q Consensus 481 w~~~~ 485 (621)
|++.+
T Consensus 311 Wd~~~ 315 (318)
T 4ggc_A 311 WRCFE 315 (318)
T ss_dssp ECCSC
T ss_pred EECCC
Confidence 98743
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=288.14 Aligned_cols=285 Identities=15% Similarity=0.268 Sum_probs=204.9
Q ss_pred cccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCcc----ccccceecccccccC------------CCeEEEEECCCC
Q psy15549 79 RHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERES----GIANVEFASDLSRHQ------------KAVNVVRFSPNG 141 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~----~~~~~~~~~~~~~h~------------~~V~~i~~sp~g 141 (621)
.|.+.|.+++|+|+|++||+|+ |+.|+||++..+.. ....+.....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 4678999999999999999998 88899999987641 111233567788898 889999999998
Q ss_pred --CEEEEEeCCCcEEEEEccCCCCCCC---CCC-----------CCccccccccccee-----eeeeecCCCCCeEEEEE
Q psy15549 142 --ELLASGDDESTIIVWKQKTDQDLPE---FPS-----------SNLDEENVNKEHWI-----VTKILRGHLEDVYDISW 200 (621)
Q Consensus 142 --~~l~s~s~dg~i~vwd~~~~~~~~~---~~~-----------~~~~~~~~~~~~~~-----~~~~~~~~~~~v~~i~~ 200 (621)
.+|++++.|+.|++||+.++..... +.. ............+. ......+|...|++++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 7999999999999999876432100 000 00000000000000 11224689999999999
Q ss_pred CCCCCEEEEEeCCCeEEEEECCC-CcEEE-------EeccCCcceEEEEEcCCC-CEEEEEeCCCcEEEEEccCcee---
Q psy15549 201 SPTSTHLISGSVDNTAIMWDVHK-GKNLG-------ILTEHKKFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSKKV--- 268 (621)
Q Consensus 201 spd~~~l~s~~~dg~i~vwd~~~-~~~~~-------~~~~~~~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~~--- 268 (621)
+|++++|++| .|+.|++||+.+ ++.+. .+..|...|.+++|+|++ ++|++++.||.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 799999999984 44444 256899999999999998 9999999999999999998775
Q ss_pred -eeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCce
Q psy15549 269 -ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAV 347 (621)
Q Consensus 269 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 347 (621)
+..+..+..+... .....+...|.+++|+|+|++|++++
T Consensus 265 ~~~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~s~~g~~l~~~~----------------------------- 304 (447)
T 3dw8_B 265 HSKLFEEPEDPSNR-----------SFFSEIISSISDVKFSHSGRYMMTRD----------------------------- 304 (447)
T ss_dssp TCEEECCC-----C-----------CHHHHHTTCEEEEEECTTSSEEEEEE-----------------------------
T ss_pred eeeEeccCCCcccc-----------ccccccCceEEEEEECCCCCEEEEee-----------------------------
Confidence 3444322211000 00011223677888888877776544
Q ss_pred ecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC-CceeEEEecccccc------------
Q psy15549 348 CLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH-ASPFAFIANIHYTK------------ 414 (621)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~h~~~------------ 414 (621)
. +.|++||+.. ++++..+. +|...
T Consensus 305 -----------------------------------------~-~~v~iwd~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 305 -----------------------------------------Y-LSVKVWDLNMENRPVETYQ-VHEYLRSKLCSLYENDC 341 (447)
T ss_dssp -----------------------------------------S-SEEEEEETTCCSSCSCCEE-SCGGGTTTHHHHHHTSG
T ss_pred -----------------------------------------C-CeEEEEeCCCCccccceee-ccccccccccccccccc
Confidence 5 8888999887 77666663 46432
Q ss_pred ---eEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCC
Q psy15549 415 ---LTDITWSSDGKVLIASSTDGYCSIISFGDNEIG 447 (621)
Q Consensus 415 ---v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~ 447 (621)
+..++|+|+|++|++|+.||.|++||+.+++..
T Consensus 342 i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp GGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred cccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 334999999999999999999999999988764
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-32 Score=277.92 Aligned_cols=229 Identities=11% Similarity=0.118 Sum_probs=176.5
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccc------------c--------------
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERES------------G-------------- 67 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~------------~-------------- 67 (621)
.++.+++|+|+|+ +|+++. ++.|++||+.+.+....+..|....... .
T Consensus 5 ~p~~~v~~s~dg~-----~l~~~~-~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (450)
T 2vdu_B 5 HPLQNLLTSRDGS-----LVFAII-KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKS 78 (450)
T ss_dssp CCCCEEEECSSSS-----EEEEEE-TTEEEEEEEETTTEEEEEEEEECCC------------------------------
T ss_pred ccEEEEEecCCCC-----EEEEEe-CCeEEEEECCCCCcceeeeecCCccccccccccccchhhcccccccccccccccc
Confidence 4799999999997 777764 7789977776665322223443221100 0
Q ss_pred ----------ccceeeccccccccCcEEEEEEccCCCEE-EEEc-CCceEEEEec--cCccccccceeccccc--ccCCC
Q psy15549 68 ----------IANVEFASDLSRHQKAVNVVRFSPNGELL-ASGD-DVGKEIWYLT--ERESGIANVEFASDLS--RHQKA 131 (621)
Q Consensus 68 ----------~~~~~~~~~~~~h~~~V~~l~~spdg~~l-as~~-d~~v~iw~~~--~~~~~~~~~~~~~~~~--~h~~~ 131 (621)
...........+|.+.|.+++|+|+|++| ++++ |+.|++|++. .+ .....+. .|...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~-------~~~~~~~~~~~~~~ 151 (450)
T 2vdu_B 79 NKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK-------NVLKLRKRFCFSKR 151 (450)
T ss_dssp ---------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS-------SCEEEEEEEECSSC
T ss_pred CcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC-------ceeeeeecccCCCC
Confidence 00000111223567789999999999996 7786 8899999998 54 3334443 56789
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC---CCEEE
Q psy15549 132 VNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT---STHLI 208 (621)
Q Consensus 132 V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd---~~~l~ 208 (621)
|.+++|+|++++|++|+.+|.|++|++.+....... ...+.+|...|++++|+|+ +++|+
T Consensus 152 v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~-----------------~~~~~~h~~~v~~~~~sp~~~~~~~l~ 214 (450)
T 2vdu_B 152 PNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFT-----------------QEPILGHVSMLTDVHLIKDSDGHQFII 214 (450)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCC-----------------CCCSEECSSCEEEEEEEECTTSCEEEE
T ss_pred ceEEEEcCCCCEEEEEeCCCcEEEEecCCccccccc-----------------ceeeecccCceEEEEEcCCCCCCcEEE
Confidence 999999999999999999999999999887654200 1345689999999999999 99999
Q ss_pred EEeCCCeEEEEECCCCcEEEE-eccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 209 SGSVDNTAIMWDVHKGKNLGI-LTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 209 s~~~dg~i~vwd~~~~~~~~~-~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
+|+.|+.|++||+.+++.+.. +.+|...|.+++|+ ++++|++++.|+.|++||+.+++.+..+.
T Consensus 215 s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 215 TSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp EEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred EEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 999999999999999988877 56899999999999 99999999999999999999998877664
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=275.23 Aligned_cols=291 Identities=16% Similarity=0.173 Sum_probs=232.1
Q ss_pred ccccccccCcEEEEEEccC---CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC
Q psy15549 74 ASDLSRHQKAVNVVRFSPN---GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD 149 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spd---g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~ 149 (621)
...+.+|.+.|++++|+|+ |++|++|+ |+.|++|++..... .....+.+|...|.+++|+|++++|++++.
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-----TIPKAQQMHTGPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-----EEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-----eeEEEeccccCCEEEEEECcCCCEEEEEcC
Confidence 3457899999999999999 69999988 88899999987321 334677889999999999999999999999
Q ss_pred CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEE--CCCCCEEEEEeCCCeEEEEECCCCcEE
Q psy15549 150 ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISW--SPTSTHLISGSVDNTAIMWDVHKGKNL 227 (621)
Q Consensus 150 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~--spd~~~l~s~~~dg~i~vwd~~~~~~~ 227 (621)
||.|++||+.++.. ..+..|...|.+++| +|++.+|++++.||.|++||+++++.+
T Consensus 107 dg~v~iwd~~~~~~----------------------~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 107 DKTAKMWDLSSNQA----------------------IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM 164 (368)
T ss_dssp TSEEEEEETTTTEE----------------------EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCS
T ss_pred CCcEEEEEcCCCCc----------------------eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE
Confidence 99999999988764 335679999999999 999999999999999999999999998
Q ss_pred EEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 228 GILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
..+..+. .+.++.+. ...+++++.++.+++|+++........... .....+..+.+
T Consensus 165 ~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~ 220 (368)
T 3mmy_A 165 MVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIES---------------------PLKHQHRCVAI 220 (368)
T ss_dssp EEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCC---------------------SCSSCEEEEEE
T ss_pred EEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccc---------------------cccCCCceEEE
Confidence 8887664 56666666 558888999999999999875433221100 00111122222
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
.++... ....++++
T Consensus 221 ~~~~~~------------------------------------------------------------------~~~~~~~~ 234 (368)
T 3mmy_A 221 FKDKQN------------------------------------------------------------------KPTGFALG 234 (368)
T ss_dssp EECTTS------------------------------------------------------------------CEEEEEEE
T ss_pred cccCCC------------------------------------------------------------------CCCeEEEe
Confidence 221111 01337888
Q ss_pred EcCCcEEEEeCCCC---ceeEEEeccccc------------ceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCC
Q psy15549 388 ATENNILLYDTQHA---SPFAFIANIHYT------------KLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP 452 (621)
Q Consensus 388 ~~dg~i~iwd~~~~---~~~~~~~~~h~~------------~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~ 452 (621)
+.|+.|++||+... ..+..+ .+|.. .|++++|+|+|++|++++.||.|++||+.++++...+..
T Consensus 235 ~~dg~i~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 235 SIEGRVAIHYINPPNPAKDNFTF-KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp ETTSEEEEEESSCSCHHHHSEEE-ECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred cCCCcEEEEecCCCCccccceee-eeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC
Confidence 89999999999887 445555 34655 799999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCCCcccCCCcccHHHhc
Q psy15549 453 PSGEESKENDPTKGEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~ 482 (621)
+...+..+.|++++..+++++.++..+.|.
T Consensus 314 ~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 314 LDQPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp CSSCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred CCCCceEEEECCCCCeEEEEeccccccccc
Confidence 999999999999999999998887655554
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-32 Score=275.94 Aligned_cols=325 Identities=19% Similarity=0.296 Sum_probs=229.2
Q ss_pred CCCeEEEeccccccCC-----cceEEEEecC----CceEEeeeccCccccc--cceeEEeccccc-----cccceeeccc
Q psy15549 13 RDPVLSVDIQLKQEKD-----NCYRIVTGGA----DSHVFDYLLKIPHRLK--TGKIWYLTERES-----GIANVEFASD 76 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~-----~~~~l~tg~~----dg~v~~~d~~~~~~~~--~~~iw~~~~~~~-----~~~~~~~~~~ 76 (621)
.-|..++.|.|+.... ...+|++|+. ...|.++++..+.... ...-|+-..++. ....+. ...
T Consensus 45 ~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~ 123 (430)
T 2xyi_A 45 EWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIE-IEI 123 (430)
T ss_dssp SSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEE-EEE
T ss_pred CCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceE-EEE
Confidence 3478999999986311 1247888765 3566655443111000 000111111100 000111 234
Q ss_pred cccccCcEEEEEEccC-CCEEEEEc-CCceEEEEeccCcccc---ccceecccccccCCCeEEEEECCCCC-EEEEEeCC
Q psy15549 77 LSRHQKAVNVVRFSPN-GELLASGD-DVGKEIWYLTERESGI---ANVEFASDLSRHQKAVNVVRFSPNGE-LLASGDDE 150 (621)
Q Consensus 77 ~~~h~~~V~~l~~spd-g~~las~~-d~~v~iw~~~~~~~~~---~~~~~~~~~~~h~~~V~~i~~sp~g~-~l~s~s~d 150 (621)
...|.+.|++++|+|+ +.+||+++ ++.|++|++....... ........+.+|...|.+++|+|++. +|++|+.|
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 203 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD 203 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence 5689999999999997 67888888 8889999998631110 01255667789999999999999988 99999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCC---cE
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVDNTAIMWDVHKG---KN 226 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~dg~i~vwd~~~~---~~ 226 (621)
|.|++|++........ .......+.+|...|.+++|+| ++.+|++++.||.|++||++++ +.
T Consensus 204 g~i~vwd~~~~~~~~~--------------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~ 269 (430)
T 2xyi_A 204 HTICLWDINATPKEHR--------------VIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKP 269 (430)
T ss_dssp SCEEEEETTSCCBGGG--------------EEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSC
T ss_pred CeEEEEeCCCCCCCCc--------------eeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcc
Confidence 9999999987542110 0111255678999999999999 6789999999999999999987 57
Q ss_pred EEEeccCCcceEEEEEcCCCC-EEEEEeCCCcEEEEEccCc-eeeeecccCCCCCCCccccccccccccccCCcccceee
Q psy15549 227 LGILTEHKKFVQGVAWDPKNQ-YVATLSSDRSLRTYSIQSK-KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304 (621)
Q Consensus 227 ~~~~~~~~~~v~~l~~sp~~~-~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 304 (621)
+..+..|...|.+++|+|++. +|++|+.||.|++||+++. ..+..+. .+...|.+
T Consensus 270 ~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-----------------------~h~~~v~~ 326 (430)
T 2xyi_A 270 SHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-----------------------SHKDEIFQ 326 (430)
T ss_dssp SEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-----------------------CCSSCEEE
T ss_pred eeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-----------------------cCCCCEEE
Confidence 777888999999999999987 6889999999999999873 3344332 34556789
Q ss_pred eeecCCCCe-EEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcE
Q psy15549 305 LTFSPDGQL-LIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRI 383 (621)
Q Consensus 305 ~~~spdg~~-l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (621)
++|+|+++. |++++
T Consensus 327 i~~sp~~~~~l~s~~----------------------------------------------------------------- 341 (430)
T 2xyi_A 327 VQWSPHNETILASSG----------------------------------------------------------------- 341 (430)
T ss_dssp EEECSSCTTEEEEEE-----------------------------------------------------------------
T ss_pred EEECCCCCCEEEEEe-----------------------------------------------------------------
Confidence 999999864 45444
Q ss_pred EEEEEcCCcEEEEeCCC--------------CceeEEEecccccceEEEEEcCCCC-eEEEEeCCCcEEEEEecCCcC
Q psy15549 384 VIAVATENNILLYDTQH--------------ASPFAFIANIHYTKLTDITWSSDGK-VLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 384 l~~~~~dg~i~iwd~~~--------------~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~s~dg~i~iw~~~~~~~ 446 (621)
.|+.|+|||+.. ...+... .+|...|++++|+|+++ +|++++.||.|++|++....+
T Consensus 342 -----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~ 413 (430)
T 2xyi_A 342 -----TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH-GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVY 413 (430)
T ss_dssp -----TTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEEC-CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHH
T ss_pred -----CCCcEEEEeCCCCccccCccccccCCcceEEEc-CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccccc
Confidence 444555555443 1233333 56889999999999999 899999999999999986543
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=277.97 Aligned_cols=296 Identities=17% Similarity=0.210 Sum_probs=233.4
Q ss_pred cEEEEEEccCCCEEEE-Ec-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcc
Q psy15549 83 AVNVVRFSPNGELLAS-GD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 83 ~V~~l~~spdg~~las-~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~ 159 (621)
....++++|+...++. ++ ++.|+||++...+.. ......+.+|...|++++|+| ++++|++|+.||.|++||+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~---~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRV---DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC---CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCC---CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEcc
Confidence 4456888988765554 44 889999998664321 123445778999999999999 99999999999999999999
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEe--ccCCcc
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKGKNLGIL--TEHKKF 236 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~ 236 (621)
++....... .....+.+|...|.+++|+|++ ++|++++.||.|++||+.+++.+..+ ..|...
T Consensus 113 ~~~~~~~~~--------------~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 178 (402)
T 2aq5_A 113 DGGLVLPLR--------------EPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDT 178 (402)
T ss_dssp TTCCSSCBC--------------SCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSC
T ss_pred CCCCccccC--------------CceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCc
Confidence 875432110 0136678999999999999998 69999999999999999999999999 789999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeec-ccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRA-CRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
|.+++|+|++++|++++.||.|++||+++++.+..+ ..+. ...+.+++|+|++.+|+
T Consensus 179 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~l~ 236 (402)
T 2aq5_A 179 IYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHE----------------------GTRPVHAVFVSEGKILT 236 (402)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSC----------------------SSSCCEEEECSTTEEEE
T ss_pred eEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCC----------------------CCcceEEEEcCCCcEEE
Confidence 999999999999999999999999999998887766 2221 11257889999888777
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
++.. .+.|+.|++
T Consensus 237 ~g~~-------------------------------------------------------------------~~~d~~i~i 249 (402)
T 2aq5_A 237 TGFS-------------------------------------------------------------------RMSERQVAL 249 (402)
T ss_dssp EEEC-------------------------------------------------------------------TTCCEEEEE
T ss_pred Eecc-------------------------------------------------------------------CCCCceEEE
Confidence 6520 025788999
Q ss_pred EeCCCCce-eEEEecccccceEEEEEcCCCCeEEE-EeCCCcEEEEEecCCcC-CcccCC--CCCcccccCCCCCCCCcc
Q psy15549 396 YDTQHASP-FAFIANIHYTKLTDITWSSDGKVLIA-SSTDGYCSIISFGDNEI-GIPYVP--PSGEESKENDPTKGEPVR 470 (621)
Q Consensus 396 wd~~~~~~-~~~~~~~h~~~v~~~~~spdg~~l~s-~s~dg~i~iw~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~ 470 (621)
||+.+++. +......|...|.+++|+|++++|++ ++.||.|++|++.+++. ...+.. +...+..+.++|++..++
T Consensus 250 wd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 250 WDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp EETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG
T ss_pred EcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccce
Confidence 99988764 44443357788999999999999975 45799999999998873 344433 457788899999998877
Q ss_pred cCCCcccHHHhcccCc
Q psy15549 471 SEDKPRSAEQAKGEGK 486 (621)
Q Consensus 471 s~~~~~~~~~w~~~~~ 486 (621)
+ .++.+++|++...
T Consensus 330 s--~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 330 N--KCEIARFYKLHER 343 (402)
T ss_dssp G--GTEEEEEEEEETT
T ss_pred e--cceeEEEEEcCCC
Confidence 6 4558889987654
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-32 Score=275.24 Aligned_cols=334 Identities=12% Similarity=0.099 Sum_probs=209.9
Q ss_pred ceeeecCCCCeEEEec---cccccCCcceEEEEecCCceEEeeeccCcccc-----ccceeEEecccccccc-ce--eec
Q psy15549 6 PEISWHNRDPVLSVDI---QLKQEKDNCYRIVTGGADSHVFDYLLKIPHRL-----KTGKIWYLTERESGIA-NV--EFA 74 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~---spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~-----~~~~iw~~~~~~~~~~-~~--~~~ 74 (621)
......-....+++.| +|+.. .|++++.++.|.+|+....... ....+|.+..+..... .. ...
T Consensus 8 ~~~~lpl~~~p~~~~w~~~~~~~~-----~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (393)
T 4gq1_A 8 NQYQLPLNVRPYTTTWCSQSPSCS-----NLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCS 82 (393)
T ss_dssp EEEECCTTCCEEEEEECTTSGGGT-----TEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCE
T ss_pred CceEecCCCCCeEEEEeCCCCCCC-----CEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCcc
Confidence 3344444455666666 45554 4444455778987765432221 1112222222111000 00 001
Q ss_pred cccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC--------CCCEEE
Q psy15549 75 SDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--------NGELLA 145 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp--------~g~~l~ 145 (621)
.....|...+....+++++.+||+++ |+.|+||+...+... .......+.+|.+.|++++|+| ++++||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~--~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~la 160 (393)
T 4gq1_A 83 YSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETII--TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIA 160 (393)
T ss_dssp EECC----------CCEEEEEEEEEETTSCEEEEEEETTEEE--EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEE
T ss_pred ccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccc--eeeeecccCCCCCceEEEEEccccccccCCCCCEEE
Confidence 11234455555566677888999988 889999999876321 1134566889999999999997 788999
Q ss_pred EEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCC
Q psy15549 146 SGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKG 224 (621)
Q Consensus 146 s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~ 224 (621)
+|+.|++|+|||+.++... ..+..|...|.+++|+|++ .+|++++.|+.|++||+.++
T Consensus 161 s~s~D~tv~~Wd~~~~~~~---------------------~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 161 SVGDDCTLIIWRLTDEGPI---------------------LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEETTSEEEEEEEETTEEE---------------------EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred EEECCCeEEEEECCCCcee---------------------eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 9999999999999877643 5566788999999999987 58999999999999999887
Q ss_pred cEEEEe-------------------------ccCCcceEEEEEc-CCCCEEEEEeCCCcEEEEEccCceeeeecccCCCC
Q psy15549 225 KNLGIL-------------------------TEHKKFVQGVAWD-PKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLP 278 (621)
Q Consensus 225 ~~~~~~-------------------------~~~~~~v~~l~~s-p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 278 (621)
+..... .+|...+.++.|+ |+++.|++++.|+.+++||+..+.....+..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~--- 296 (393)
T 4gq1_A 220 LSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDS--- 296 (393)
T ss_dssp C----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------
T ss_pred cccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeee---
Confidence 643321 3567778899987 79999999999999999999887765544322
Q ss_pred CCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceee
Q psy15549 279 VDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVA 358 (621)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (621)
...+..+.+.|+++.+.... .. ..
T Consensus 297 --------------------~~~~~~~~~~~~~~~~~~~~-----~~-------------------------------~~ 320 (393)
T 4gq1_A 297 --------------------TMKLGPKNLLPNVQGISLFP-----SL-------------------------------LG 320 (393)
T ss_dssp ---------------------------CCSCSEEEECSSC-----CS-------------------------------SC
T ss_pred --------------------cCccccEEEccccccccccC-----cc-------------------------------ee
Confidence 22335566666655443322 00 00
Q ss_pred eeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEE
Q psy15549 359 VKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSI 438 (621)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~i 438 (621)
..+.| ..++.++++++.||.|++||+.+++....+. .|..+|++++|+|||++||+++.+| +.+
T Consensus 321 ~~~~~--------------~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~-~~~~~V~svafspdG~~LA~as~~G-v~l 384 (393)
T 4gq1_A 321 ACPHP--------------RYMDYFATAHSQHGLIQLINTYEKDSNSIPI-QLGMPIVDFCWHQDGSHLAIATEGS-VLL 384 (393)
T ss_dssp CEECS--------------SCTTEEEEEETTTTEEEEEETTCTTCCEEEE-ECSSCEEEEEECTTSSEEEEEESSE-EEE
T ss_pred EEEcc--------------CCCCEEEEEECCCCEEEEEECCCCcEEEEec-CCCCcEEEEEEcCCCCEEEEEeCCC-eEE
Confidence 01111 0122345566679999999999998887774 5888999999999999999998766 667
Q ss_pred EEec
Q psy15549 439 ISFG 442 (621)
Q Consensus 439 w~~~ 442 (621)
|++.
T Consensus 385 vrL~ 388 (393)
T 4gq1_A 385 TRLM 388 (393)
T ss_dssp EEEG
T ss_pred EEEe
Confidence 7664
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-32 Score=277.68 Aligned_cols=273 Identities=19% Similarity=0.312 Sum_probs=229.4
Q ss_pred ccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy15549 78 SRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVW 156 (621)
Q Consensus 78 ~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vw 156 (621)
.+|...|.+++| ++++|++|+ |+.|++|++..+ .....+.+|...|.+++| ++++|++|+.||.|++|
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vw 198 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL-------ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVW 198 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC-------CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCC-------eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEE
Confidence 456778998877 789999988 889999999876 567778899999999999 78899999999999999
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE---EEeccC
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL---GILTEH 233 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~---~~~~~~ 233 (621)
|+.+++.+ ..+.+|...|.+++|++ .+|++|+.||.|++||+.++... ..+.+|
T Consensus 199 d~~~~~~~---------------------~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~ 255 (435)
T 1p22_A 199 DVNTGEML---------------------NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH 255 (435)
T ss_dssp ESSSCCEE---------------------EEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCC
T ss_pred ECCCCcEE---------------------EEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCC
Confidence 99988753 66778999999999974 59999999999999999987765 667889
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
...|.+++| ++++|++++.||.|++||+++++.+..+..+ ...|.++.|+ +
T Consensus 256 ~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-----------------------~~~v~~~~~~--~-- 306 (435)
T 1p22_A 256 RAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH-----------------------KRGIACLQYR--D-- 306 (435)
T ss_dssp SSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECC-----------------------SSCEEEEEEE--T--
T ss_pred CCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCC-----------------------CCcEEEEEeC--C--
Confidence 999999999 6899999999999999999998876665422 2223444441 1
Q ss_pred EEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcE
Q psy15549 314 LIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNI 393 (621)
Q Consensus 314 l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 393 (621)
..+++++.||.|
T Consensus 307 --------------------------------------------------------------------~~l~~g~~dg~i 318 (435)
T 1p22_A 307 --------------------------------------------------------------------RLVVSGSSDNTI 318 (435)
T ss_dssp --------------------------------------------------------------------TEEEEEETTSCE
T ss_pred --------------------------------------------------------------------CEEEEEeCCCeE
Confidence 456777789999
Q ss_pred EEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc---------CCcccCCCCCcccccCCCC
Q psy15549 394 LLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE---------IGIPYVPPSGEESKENDPT 464 (621)
Q Consensus 394 ~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~---------~~~~~~~~~~~~~~~~~~~ 464 (621)
++||+.+++.+..+ .+|...|.+++| ++.+|++|+.||.|++||+.++. ....+..|...+..+.+
T Consensus 319 ~iwd~~~~~~~~~~-~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-- 393 (435)
T 1p22_A 319 RLWDIECGACLRVL-EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF-- 393 (435)
T ss_dssp EEEETTTCCEEEEE-CCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--
T ss_pred EEEECCCCCEEEEE-eCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--
Confidence 99999999998888 469999999999 78899999999999999998776 66777888888888887
Q ss_pred CCCCcccCCCcccHHHhcccCc
Q psy15549 465 KGEPVRSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 465 ~~~~~~s~~~~~~~~~w~~~~~ 486 (621)
++..+++++.|+.+++|++...
T Consensus 394 ~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 394 DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp CSSCEEECCSSSEEEEEC----
T ss_pred CCCEEEEEeCCCEEEEEECCCC
Confidence 7888999999999999997654
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-32 Score=297.13 Aligned_cols=257 Identities=21% Similarity=0.360 Sum_probs=210.5
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
.+..+|.++|++++|+|+++ +|++|+.||.|+ ||++..+. ......+.+|.+.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~-----~latg~~dg~I~--------------vwd~~~~~-----~~~~~~l~~h~~~V~~ 58 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGK-----RLATCSSDKTIK--------------IFEVEGET-----HKLIDTLTGHEGPVWR 58 (753)
T ss_dssp -----CCCCEEEECCCSSSC-----CEEEEETTTEEE--------------EEEEETTE-----EEEEEEECCCSSCEEE
T ss_pred eecccCcceeEEEEECCCCC-----eEEEEECCCcEE--------------EEecCCCC-----CccceeccCCcCceEE
Confidence 46678999999999999998 999999999999 99887432 1234568899999999
Q ss_pred EEEccC--CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC--CCEEEEEeCCCcEEEEEccCC
Q psy15549 87 VRFSPN--GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN--GELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 87 l~~spd--g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~--g~~l~s~s~dg~i~vwd~~~~ 161 (621)
++|+|+ +++|++|+ |+.|++|++..+. ......+.+|...|.+++|+|+ +++|++|+.||.|++||+.+.
T Consensus 59 l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~-----~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 59 VDWAHPKFGTILASCSYDGKVLIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEECCTTSCSEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred EEecCCCCCCEEEEEeCCCeEEEEECCCCc-----ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 999998 99999988 8899999998762 2356777889999999999999 999999999999999999887
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-------------CCCEEEEEeCCCeEEEEECCCC----
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-------------TSTHLISGSVDNTAIMWDVHKG---- 224 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-------------d~~~l~s~~~dg~i~vwd~~~~---- 224 (621)
.... ...+.+|...|.+++|+| ++.+|++|+.||.|++||++++
T Consensus 134 ~~~~-------------------~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~ 194 (753)
T 3jro_A 134 GTTS-------------------PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY 194 (753)
T ss_dssp SCCC-------------------CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEE
T ss_pred CCcc-------------------eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccc
Confidence 5432 245678999999999999 5899999999999999999887
Q ss_pred cEEEEeccCCcceEEEEEcCC---CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccc
Q psy15549 225 KNLGILTEHKKFVQGVAWDPK---NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSF 301 (621)
Q Consensus 225 ~~~~~~~~~~~~v~~l~~sp~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (621)
.....+.+|...|.+++|+|+ +++|++++.||.|++||+.++...... .......+...
T Consensus 195 ~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~------------------~~~~~~~~~~~ 256 (753)
T 3jro_A 195 VLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKK------------------TLLKEEKFPDV 256 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBC------------------CBSSSSCCSSC
T ss_pred eeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCccee------------------EEeccCCCCCc
Confidence 556777899999999999999 899999999999999999886421111 11122345667
Q ss_pred eeeeeecCCCCeEEeccccccCCCCCCcceeee
Q psy15549 302 FRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 302 i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
|.+++|+|+|+++++++ .|+.+++|++.
T Consensus 257 v~~l~~spdg~~l~s~s-----~Dg~I~vwd~~ 284 (753)
T 3jro_A 257 LWRASWSLSGNVLALSG-----GDNKVTLWKEN 284 (753)
T ss_dssp CCCEEECTTTCCEEEEC-----SSSCEECCBCC
T ss_pred eEEEEEcCCCCEEEEEc-----CCCEEEEEecC
Confidence 88999999999999887 67777777654
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=275.10 Aligned_cols=267 Identities=16% Similarity=0.134 Sum_probs=208.9
Q ss_pred ccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy15549 78 SRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVW 156 (621)
Q Consensus 78 ~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vw 156 (621)
+.-...|.+++|||||+++|+++ |+.|+ +.. ....+.+|...|.+++|+|+| .++.+.+|
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~----------~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~ 72 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPK----------YAKDINCNSKNLFHVKEFPLE-------FENKLDFE 72 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EEC----------CCSCCSSBGGGTEEEEEECCC-------CCCTTTTS
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--ccc----------ccceecCCCccEEEEEECCCC-------CcceEEEE
Confidence 34457899999999999999999 66777 532 234457999999999999998 45655555
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCc-
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKK- 235 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~- 235 (621)
+....... ...|...|.+++|+|+|.+||+++.||.|++||... ++..+. |..
T Consensus 73 ~~~~~~~~-----------------------~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~ 126 (588)
T 2j04_A 73 LAQQNGLL-----------------------NSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGN 126 (588)
T ss_dssp CCCSSCSS-----------------------TTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSC
T ss_pred eCCCceEe-----------------------ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCc
Confidence 54332211 114578899999999999999999999999999544 666666 665
Q ss_pred ----ceEEEEEcCCCCEEEEEeCCCcEEEEEccCcee-------eeecccCCCCCCCccccccccccccccCCcccceee
Q psy15549 236 ----FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV-------ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304 (621)
Q Consensus 236 ----~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 304 (621)
.|.+++|||||++|++|+.||+|+|||+.++.. +..+..+ ...|...|.+
T Consensus 127 ~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~-------------------~~gh~~~V~s 187 (588)
T 2j04_A 127 LSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLS-------------------DAGSKDWVTH 187 (588)
T ss_dssp STTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECS-------------------CTTCCCCEEE
T ss_pred cccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecc-------------------cccccccEEE
Confidence 499999999999999999999999999988642 2332111 1234567888
Q ss_pred eeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEE
Q psy15549 305 LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIV 384 (621)
Q Consensus 305 ~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 384 (621)
++|+||| ++++
T Consensus 188 VawSPdg--Laas------------------------------------------------------------------- 198 (588)
T 2j04_A 188 IVWYEDV--LVAA------------------------------------------------------------------- 198 (588)
T ss_dssp EEEETTE--EEEE-------------------------------------------------------------------
T ss_pred EEEcCCc--EEEE-------------------------------------------------------------------
Confidence 8888887 4443
Q ss_pred EEEEcCCcEEEEeCCCCcee---EEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccC
Q psy15549 385 IAVATENNILLYDTQHASPF---AFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKEN 461 (621)
Q Consensus 385 ~~~~~dg~i~iwd~~~~~~~---~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 461 (621)
+.|+.|++||+..+... ..+..+|...|.+++|+ |+.||+++ +|.|++|++.++.......+|...+..+.
T Consensus 199 ---s~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va 272 (588)
T 2j04_A 199 ---LSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIP 272 (588)
T ss_dssp ---ETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEE
T ss_pred ---eCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEE
Confidence 36788999998887742 44544688899999999 68999997 69999999998887444447888899899
Q ss_pred C--CCCCCCcccCCCcccHHHhccc
Q psy15549 462 D--PTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 462 ~--~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
+ ++++..++++..+|. ++|...
T Consensus 273 ~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 273 LNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp ETTCSSCEEEEECSSCEE-EEEESS
T ss_pred eeeCCCCCEEEEEcCCCC-EEEeec
Confidence 9 999999999999999 999865
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-30 Score=258.75 Aligned_cols=303 Identities=14% Similarity=0.095 Sum_probs=213.3
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
..|.++|++++|+||++ +||+|+.++ ++ ||++....... ..+...+..+++
T Consensus 16 ~~h~~~V~~v~fs~dg~-----~la~g~~~~-~~--------------iw~~~~~~~~~---------~~~~~~~~~~~~ 66 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQS-----CLILSTLKS-FE--------------IYNVHPVAHIM---------SQEMRHLSKVRM 66 (355)
T ss_dssp ---CCCCCEEEECTTSS-----EEEEECSSE-EE--------------EEEETTEEEEE---------EEECSCCCEEEE
T ss_pred ccCCCceEEEEECCCCC-----EEEEEcCCE-EE--------------EEecCCcceee---------eeecCCeEEEEE
Confidence 56899999999999998 999999886 67 88877553321 122235888899
Q ss_pred ccCCCEEEE-Ec-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC-CCCCC
Q psy15549 90 SPNGELLAS-GD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD-QDLPE 166 (621)
Q Consensus 90 spdg~~las-~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~-~~~~~ 166 (621)
.+++++++. ++ ++.|++||...+ ..+..+. |...|.+++|+++. ++++ .|+.|++||+.+. +.+..
T Consensus 67 ~~~~~~~~~~~~~d~~v~iWd~~~~-------~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~ 135 (355)
T 3vu4_A 67 LHRTNYVAFVTGVKEVVHIWDDVKK-------QDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITD 135 (355)
T ss_dssp CTTSSEEEEECSSTTEEEEEETTTT-------EEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSC
T ss_pred cCCCCEEEEEECCccEEEEEECCCC-------cEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEE
Confidence 998888854 44 779999999876 4455554 66789999998864 4444 3789999999988 55433
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEE--EeCCCeEEEEECCCCc----------------EEE
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLIS--GSVDNTAIMWDVHKGK----------------NLG 228 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s--~~~dg~i~vwd~~~~~----------------~~~ 228 (621)
+ .. ....+++++ .++++ |+.+|.|++||+.++. ++.
T Consensus 136 ~---------------------~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~ 189 (355)
T 3vu4_A 136 D---------------------IR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGV 189 (355)
T ss_dssp C---------------------EE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCE
T ss_pred e---------------------cc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccE
Confidence 3 11 334556666 56666 5789999999998865 267
Q ss_pred EeccCCcceEEEEEcCCCCEEEEEeCCCc-EEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 229 ILTEHKKFVQGVAWDPKNQYVATLSSDRS-LRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 229 ~~~~~~~~v~~l~~sp~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
.+.+|...|.+++|+|+|++|++|+.|++ |++||+++++.+..+.. ..+...|.+++|
T Consensus 190 ~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~---------------------g~h~~~v~~~~~ 248 (355)
T 3vu4_A 190 LIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRR---------------------GLDRADVVDMKW 248 (355)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEEC---------------------TTCCSCEEEEEE
T ss_pred EEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc---------------------CCCCCcEEEEEE
Confidence 88899999999999999999999999998 99999999988877641 114456899999
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
+|+|++|++++ .|+.+++|++..... .....+... +.|..+
T Consensus 249 s~~~~~l~s~s-----~d~~v~iw~~~~~~~-----~~~~~~~~~--------~~~~~~--------------------- 289 (355)
T 3vu4_A 249 STDGSKLAVVS-----DKWTLHVFEIFNDQD-----NKRHALKGW--------INMKYF--------------------- 289 (355)
T ss_dssp CTTSCEEEEEE-----TTCEEEEEESSCCSC-----CCSEETTTT--------EECCCC---------------------
T ss_pred CCCCCEEEEEE-----CCCEEEEEEccCCCC-----cccccccce--------eecccc---------------------
Confidence 99999999998 889999998753210 000011000 000000
Q ss_pred EcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCC
Q psy15549 388 ATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIG 447 (621)
Q Consensus 388 ~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~ 447 (621)
+. .|.. ....+...+......++|++||++|++++.||.+++|++..++..
T Consensus 290 --~~---~~~~----~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 290 --QS---EWSL----CNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp --CC---SSCS----EEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTT
T ss_pred --cc---ccce----eEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCC
Confidence 00 0100 011111122334577999999999999999999999999876543
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-30 Score=262.55 Aligned_cols=343 Identities=11% Similarity=0.065 Sum_probs=243.7
Q ss_pred CCCCeEEEe---ccccccCCcceEEEEecCCc--eEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 12 NRDPVLSVD---IQLKQEKDNCYRIVTGGADS--HVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 12 h~~~v~~l~---~spd~~~~~~~~l~tg~~dg--~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
....+..++ |+|++. .++..+..+ ...+|- .......+.||.+..... .+.....+..+ ..+.+
T Consensus 59 ~~~g~~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~d~~~~---~~~~~~~~~~~-~~~~~ 127 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKE-----IELKLSSPGFQNSSYRI--RKPEELNEKLIALDKEGI---THRFISRFKTG-FQPKS 127 (433)
T ss_dssp TTEEEEEEEEECCCTTCC-----EEEEEECTTBCCEEEEE--SSGGGGTTCEEECCBTTC---SEEEEEEEECS-SCBCC
T ss_pred cCCccEEEEEeeccCCCc-----EEEEEEccccCcceeee--cccCCCceEEEEECCCCC---cceEEEEEcCC-CCceE
Confidence 445678888 888876 444332211 111110 011111223666554221 11122334333 45669
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
++|+|++.++++++ ++.|++|++..+... .......+.+|...|.+++|++++.++++++.|+.|++||+.+++.+
T Consensus 128 ~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~- 204 (433)
T 3bws_A 128 VRFIDNTRLAIPLLEDEGMDVLDINSGQTV--RLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK- 204 (433)
T ss_dssp CEESSSSEEEEEBTTSSSEEEEETTTCCEE--EECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE-
T ss_pred EEEeCCCeEEEEeCCCCeEEEEECCCCeEe--eecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE-
Confidence 99999777777776 667999999876311 00111145689999999999999999999999999999999887643
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCcEEEEeccCCcceEEEEEcC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp 244 (621)
..+..|...+.+++|+|++++++++ +.++.|++||+.+++.+..+..+ ..+.+++|+|
T Consensus 205 --------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~ 263 (433)
T 3bws_A 205 --------------------ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSK 263 (433)
T ss_dssp --------------------EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECT
T ss_pred --------------------EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcC
Confidence 5556888999999999999988554 47999999999999988887654 5589999999
Q ss_pred CCCEEEEEe--------CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 245 KNQYVATLS--------SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 245 ~~~~l~s~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
++++|++++ .||.|++||+.+++.+..+. +...+.+++|+|+++++++
T Consensus 264 ~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~l~~ 319 (433)
T 3bws_A 264 DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG------------------------PPGNKRHIVSGNTENKIYV 319 (433)
T ss_dssp TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE------------------------EEECEEEEEECSSTTEEEE
T ss_pred CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc------------------------CCCCcceEEECCCCCEEEE
Confidence 999999888 48899999999887765542 1234578999999987655
Q ss_pred ccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc-------
Q psy15549 317 PSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT------- 389 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------- 389 (621)
++. .++.+++|+....... ..+ .+...+..+.++| +++.+++++.
T Consensus 320 ~~~----~~~~v~v~d~~~~~~~-------~~~-~~~~~~~~~~~s~----------------dg~~l~~~~~~~~~~~~ 371 (433)
T 3bws_A 320 SDM----CCSKIEVYDLKEKKVQ-------KSI-PVFDKPNTIALSP----------------DGKYLYVSCRGPNHPTE 371 (433)
T ss_dssp EET----TTTEEEEEETTTTEEE-------EEE-ECSSSEEEEEECT----------------TSSEEEEEECCCCCTTT
T ss_pred Eec----CCCEEEEEECCCCcEE-------EEe-cCCCCCCeEEEcC----------------CCCEEEEEecCCCcccc
Confidence 532 7899999987532111 111 1233455666665 6677777765
Q ss_pred --------CCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeC-CCcEEEEEecC
Q psy15549 390 --------ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASST-DGYCSIISFGD 443 (621)
Q Consensus 390 --------dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~-dg~i~iw~~~~ 443 (621)
||.|++||+.+++.+..+.. ...+.+++|+|+|++|++++. |+.|++|+++.
T Consensus 372 ~~~~~g~~dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 372 GYLKKGLVLGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CTTSCCSSCCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ccccccccceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 57999999999998887753 457999999999999998875 99999999863
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-31 Score=272.89 Aligned_cols=270 Identities=11% Similarity=0.087 Sum_probs=210.1
Q ss_pred CcEEEEEEccCCCEEEEEcCCceEEEEeccCccc--cccce---------------------------------------
Q psy15549 82 KAVNVVRFSPNGELLASGDDVGKEIWYLTERESG--IANVE--------------------------------------- 120 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~--~~~~~--------------------------------------- 120 (621)
.++.+++|+++|++|+++.++.|++|++..+... ...+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 5789999999999999888999999999877400 00000
Q ss_pred ---------ecccccccCCCeEEEEECCCCCEE-EEEeCCCcEEEEEcc--CCCCCCCCCCCCcccccccccceeeeeee
Q psy15549 121 ---------FASDLSRHQKAVNVVRFSPNGELL-ASGDDESTIIVWKQK--TDQDLPEFPSSNLDEENVNKEHWIVTKIL 188 (621)
Q Consensus 121 ---------~~~~~~~h~~~V~~i~~sp~g~~l-~s~s~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (621)
......+|...|.+++|+|++++| ++++.||.|++||+. ++..+ ..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~---------------------~~~ 143 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVL---------------------KLR 143 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCE---------------------EEE
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCcee---------------------eee
Confidence 001112455689999999999996 899999999999998 66543 333
Q ss_pred c--CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE----EeccCCcceEEEEEcCC---CCEEEEEeCCCcEE
Q psy15549 189 R--GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLG----ILTEHKKFVQGVAWDPK---NQYVATLSSDRSLR 259 (621)
Q Consensus 189 ~--~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~----~~~~~~~~v~~l~~sp~---~~~l~s~~~dg~i~ 259 (621)
. .|...|++++|+|++++|++|+.+|.|++|++.++.... .+.+|...|.+++|+|+ +++|++++.|+.|+
T Consensus 144 ~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~ 223 (450)
T 2vdu_B 144 KRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIK 223 (450)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEE
T ss_pred ecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEE
Confidence 3 677899999999999999999999999999998876544 67789999999999999 99999999999999
Q ss_pred EEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeee
Q psy15549 260 TYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTR 339 (621)
Q Consensus 260 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~ 339 (621)
+||+.+++.+..+. ..+...|.+++|+ ++++|++++
T Consensus 224 vwd~~~~~~~~~~~----------------------~~h~~~v~~~~~s-d~~~l~s~~--------------------- 259 (450)
T 2vdu_B 224 ISHYPQCFIVDKWL----------------------FGHKHFVSSICCG-KDYLLLSAG--------------------- 259 (450)
T ss_dssp EEEESCTTCEEEEC----------------------CCCSSCEEEEEEC-STTEEEEEE---------------------
T ss_pred EEECCCCceeeeee----------------------cCCCCceEEEEEC-CCCEEEEEe---------------------
Confidence 99999887665531 1345567899999 888887765
Q ss_pred cccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEec----------
Q psy15549 340 ACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIAN---------- 409 (621)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------- 409 (621)
.|+.|++||+.+++.+..+..
T Consensus 260 -------------------------------------------------~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 290 (450)
T 2vdu_B 260 -------------------------------------------------GDDKIFAWDWKTGKNLSTFDYNSLIKPYLND 290 (450)
T ss_dssp -------------------------------------------------SSSEEEEEETTTCCEEEEEECHHHHGGGCCT
T ss_pred -------------------------------------------------CCCeEEEEECCCCcEeeeecchhhhhhhhhh
Confidence 556667777666666555531
Q ss_pred --------------ccccceEEEEEcCCCCeEEEEe-CCCcEEEEEe--cCC---cCCcccCCCCCcccccCCCCCC
Q psy15549 410 --------------IHYTKLTDITWSSDGKVLIASS-TDGYCSIISF--GDN---EIGIPYVPPSGEESKENDPTKG 466 (621)
Q Consensus 410 --------------~h~~~v~~~~~spdg~~l~s~s-~dg~i~iw~~--~~~---~~~~~~~~~~~~~~~~~~~~~~ 466 (621)
.+...|.+++|+|++++|++++ .|+.|++|++ .++ .....+..+ ..+..+.+++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~ 366 (450)
T 2vdu_B 291 QHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE 366 (450)
T ss_dssp TSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE
T ss_pred cccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCc
Confidence 1235799999999999999998 8999999999 555 555566666 667777887754
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-30 Score=266.95 Aligned_cols=277 Identities=19% Similarity=0.294 Sum_probs=214.1
Q ss_pred eeecCCCCeEEEecccc-ccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccc---cceeeccccccccCc
Q psy15549 8 ISWHNRDPVLSVDIQLK-QEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGI---ANVEFASDLSRHQKA 83 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd-~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~---~~~~~~~~~~~h~~~ 83 (621)
....|.+.|++++|+|+ +. +||+|+.+|.|+ +|++....... ........+.+|...
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~-----~lat~~~dg~V~--------------vwd~~~~~~~~~~~~~~~~~~~~~~h~~~ 183 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNAC-----VIATKTPSSDVL--------------VFDYTKHPSKPEPSGECQPDLRLRGHQKE 183 (430)
T ss_dssp EEEEESSCCSEEEEETTEEE-----EEEEECSSSCEE--------------EEEGGGSCSSCCTTCCCCCSEEEECCSSC
T ss_pred EEEcCCCcEEEEEECCCCCc-----EEEEECCCCcEE--------------EEECCCcccccCccccCCCcEEecCCCCC
Confidence 45678899999999997 55 999999999999 77776521100 012234567899999
Q ss_pred EEEEEEccCCC-EEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccC
Q psy15549 84 VNVVRFSPNGE-LLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 84 V~~l~~spdg~-~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~ 160 (621)
|++++|+|++. +|++|+ |+.|++|++.........+.....+.+|...|.+++|+| ++.+|++++.||.|++||+++
T Consensus 184 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp CCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred eEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 99999999998 999888 889999999875332222333556778999999999999 778999999999999999998
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCC-CcEEEEeccCCcceE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST-HLISGSVDNTAIMWDVHK-GKNLGILTEHKKFVQ 238 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~-~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~ 238 (621)
...... ...+..|...|++++|+|++. +|++|+.||.|++||+++ +.++..+..|...|.
T Consensus 264 ~~~~~~------------------~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~ 325 (430)
T 2xyi_A 264 NNTSKP------------------SHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIF 325 (430)
T ss_dssp SCSSSC------------------SEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEE
T ss_pred CCCCcc------------------eeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEE
Confidence 742221 245668999999999999887 688999999999999998 567888889999999
Q ss_pred EEEEcCCCC-EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC-eEEe
Q psy15549 239 GVAWDPKNQ-YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ-LLIA 316 (621)
Q Consensus 239 ~l~~sp~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~-~l~~ 316 (621)
+++|+|+++ +|++++.||.|++||+........... ........++....+...|.+++|+|++. +|++
T Consensus 326 ~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 396 (430)
T 2xyi_A 326 QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED---------AEDGPPELLFIHGGHTAKISDFSWNPNEPWIICS 396 (430)
T ss_dssp EEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHH---------HHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEE
T ss_pred EEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccc---------cccCCcceEEEcCCCCCCceEEEECCCCCCEEEE
Confidence 999999985 689999999999999987321110000 00000011223345667789999999999 7777
Q ss_pred ccccccCCCCCCcceeeee
Q psy15549 317 PSGCLENSDSTRKPISVTH 335 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~ 335 (621)
++ .|+.+++|++..
T Consensus 397 ~s-----~dg~i~iw~~~~ 410 (430)
T 2xyi_A 397 VS-----EDNIMQVWQMAE 410 (430)
T ss_dssp EE-----TTSEEEEEEECH
T ss_pred EE-----CCCCEEEeEccc
Confidence 77 899999999864
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.5e-31 Score=291.27 Aligned_cols=257 Identities=17% Similarity=0.264 Sum_probs=204.6
Q ss_pred cccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCC--CCEEEEEeCCC
Q psy15549 75 SDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN--GELLASGDDES 151 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~--g~~l~s~s~dg 151 (621)
..+.+|.+.|++++|+|+|++|++|+ |+.|++|++..+. ......+.+|...|++++|+|+ +++|++|+.||
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~-----~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC-----CccceeccCCcCceEEEEecCCCCCCEEEEEeCCC
Confidence 34789999999999999999999988 8889999998542 2566778899999999999987 99999999999
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEECCCC--cEE
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT--STHLISGSVDNTAIMWDVHKG--KNL 227 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd--~~~l~s~~~dg~i~vwd~~~~--~~~ 227 (621)
.|++||+.++.. .....+.+|...|++++|+|+ +++|++|+.||.|++||+.++ ...
T Consensus 78 ~I~vwd~~~~~~-------------------~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~ 138 (753)
T 3jro_A 78 KVLIWKEENGRW-------------------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP 138 (753)
T ss_dssp CEEEEEEETTEE-------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC
T ss_pred eEEEEECCCCcc-------------------cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce
Confidence 999999988641 123667789999999999999 999999999999999999877 334
Q ss_pred EEeccCCcceEEEEEcC-------------CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccc
Q psy15549 228 GILTEHKKFVQGVAWDP-------------KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFH 294 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp-------------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (621)
..+..|...|.+++|+| ++.+|++|+.||.|++||++++...... ...
T Consensus 139 ~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~-------------------~~~ 199 (753)
T 3jro_A 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL-------------------EST 199 (753)
T ss_dssp EEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEE-------------------EEE
T ss_pred eEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccccee-------------------eee
Confidence 56678999999999999 5899999999999999999876321111 001
Q ss_pred cCCcccceeeeeecCC---CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCC
Q psy15549 295 DDTMKSFFRRLTFSPD---GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPS 371 (621)
Q Consensus 295 ~~~~~~~i~~~~~spd---g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (621)
...+...|.+++|+|+ ++++++
T Consensus 200 ~~~h~~~V~~l~~sp~~~~~~~l~s------------------------------------------------------- 224 (753)
T 3jro_A 200 LEGHSDWVRDVAWSPTVLLRSYLAS------------------------------------------------------- 224 (753)
T ss_dssp ECCCSSCEEEEEECCCCSSSEEEEE-------------------------------------------------------
T ss_pred ecCCCCcEEEEEeccCCCCCCEEEE-------------------------------------------------------
Confidence 1234556788888888 555554
Q ss_pred CCCCCccCCCcEEEEEEcCCcEEEEeCCCCce-----eEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 372 DDKPLFKLPYRIVIAVATENNILLYDTQHASP-----FAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 372 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
++.||.|++||+.++.. .... ..|...|++++|+|+|++|++++.||.|++|++..+.
T Consensus 225 ---------------~s~Dg~I~iwd~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 225 ---------------VSQDRTCIIWTQDNEQGPWKKTLLKE-EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp ---------------EESSSCEEEEEESSSSSCCBCCBSSS-SCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred ---------------EecCCEEEEecCCCCCCcceeEEecc-CCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 44677788888776531 1111 2478899999999999999999999999999998654
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.98 E-value=6.2e-30 Score=259.09 Aligned_cols=278 Identities=15% Similarity=0.168 Sum_probs=218.6
Q ss_pred eEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEE-EEEc-CCceEEEE
Q psy15549 31 YRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL-ASGD-DVGKEIWY 108 (621)
Q Consensus 31 ~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~l-as~~-d~~v~iw~ 108 (621)
.++++++.|+.|+ +||+.+++... .+..|. .+.+++|+|+|++| ++++ ++.|++|+
T Consensus 3 ~l~vs~~~d~~v~--------------v~d~~~~~~~~-------~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d 60 (391)
T 1l0q_A 3 FAYIANSESDNIS--------------VIDVTSNKVTA-------TIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIID 60 (391)
T ss_dssp EEEEEETTTTEEE--------------EEETTTTEEEE-------EEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred EEEEEcCCCCEEE--------------EEECCCCeEEE-------EeecCC-CcceEEECCCCCEEEEECCCCCeEEEEE
Confidence 4889999999999 88887665432 255554 58999999999987 5554 88999999
Q ss_pred eccCccccccceecccccccCCCeEEEEECCCCCEEEE-EeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeee
Q psy15549 109 LTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS-GDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187 (621)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s-~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (621)
+..+ +....+..+. .+.+++|+|++++|+. ++.++.|++||+.+++.+ ..
T Consensus 61 ~~~~-------~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~---------------------~~ 111 (391)
T 1l0q_A 61 TATN-------NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA---------------------GT 111 (391)
T ss_dssp TTTT-------EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE---------------------EE
T ss_pred CCCC-------eEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEE---------------------EE
Confidence 9876 4455555444 8999999999998765 456799999999887643 23
Q ss_pred ecCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEE-EEEeCCCcEEEEEccC
Q psy15549 188 LRGHLEDVYDISWSPTSTHL-ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYV-ATLSSDRSLRTYSIQS 265 (621)
Q Consensus 188 ~~~~~~~v~~i~~spd~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l-~s~~~dg~i~iwd~~~ 265 (621)
+. +...+.+++|+|++++| ++++.++.|++||+.+++.+..+..+ ..+.+++|+|++++| ++++.++.|++||+++
T Consensus 112 ~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 112 VK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp EE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred Ee-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 33 34568999999999977 67888999999999999988888665 456899999999987 5667789999999999
Q ss_pred ceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCC
Q psy15549 266 KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKP 345 (621)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~ 345 (621)
++.+..+. +...+.+++|+|+|+++++++. +
T Consensus 190 ~~~~~~~~------------------------~~~~~~~~~~~~~g~~l~~~~~-----~-------------------- 220 (391)
T 1l0q_A 190 NSVIDTVK------------------------VEAAPSGIAVNPEGTKAYVTNV-----D-------------------- 220 (391)
T ss_dssp TEEEEEEE------------------------CSSEEEEEEECTTSSEEEEEEE-----C--------------------
T ss_pred CeEEEEEe------------------------cCCCccceEECCCCCEEEEEec-----C--------------------
Confidence 88766553 1234578899999888876541 0
Q ss_pred ceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC
Q psy15549 346 AVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK 425 (621)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~ 425 (621)
..++.|++||+.+++.+..+.. | ..+.+++|+|+|+
T Consensus 221 ------------------------------------------~~~~~v~~~d~~~~~~~~~~~~-~-~~~~~~~~s~dg~ 256 (391)
T 1l0q_A 221 ------------------------------------------KYFNTVSMIDTGTNKITARIPV-G-PDPAGIAVTPDGK 256 (391)
T ss_dssp ------------------------------------------SSCCEEEEEETTTTEEEEEEEC-C-SSEEEEEECTTSS
T ss_pred ------------------------------------------cCCCcEEEEECCCCeEEEEEec-C-CCccEEEEccCCC
Confidence 0468999999999988887753 4 4589999999999
Q ss_pred eE-EEEeCCCcEEEEEecCCcCCcccCCCC
Q psy15549 426 VL-IASSTDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 426 ~l-~s~s~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
+| ++++.|+.|++||+.++++...+..+.
T Consensus 257 ~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~ 286 (391)
T 1l0q_A 257 KVYVALSFXNTVSVIDTATNTITATMAVGK 286 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred EEEEEcCCCCEEEEEECCCCcEEEEEECCc
Confidence 87 566889999999999988777665543
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.98 E-value=8.8e-31 Score=260.50 Aligned_cols=268 Identities=19% Similarity=0.211 Sum_probs=211.7
Q ss_pred ccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC
Q psy15549 123 SDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP 202 (621)
Q Consensus 123 ~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp 202 (621)
..+.+|...|++++|+|++++|++|+.||.|++||+.++... +.....+.+|...|++++|+|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~-----------------~~~~~~~~~~~~~v~~~~~~~ 67 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN-----------------WELSDSWRAHDSSIVAIDWAS 67 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC-----------------EEEEEEEECCSSCEEEEEECC
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc-----------------ceecceeccCCCcEEEEEEcC
Confidence 346789999999999999999999999999999999876532 123466789999999999999
Q ss_pred --CCCEEEEEeCCCeEEEEECCCC---------cEEEEeccCCcceEEEEEcCC--CCEEEEEeCCCcEEEEEccCceee
Q psy15549 203 --TSTHLISGSVDNTAIMWDVHKG---------KNLGILTEHKKFVQGVAWDPK--NQYVATLSSDRSLRTYSIQSKKVI 269 (621)
Q Consensus 203 --d~~~l~s~~~dg~i~vwd~~~~---------~~~~~~~~~~~~v~~l~~sp~--~~~l~s~~~dg~i~iwd~~~~~~~ 269 (621)
++++|++++.||.|++||+.++ +.+..+..|...|.+++|+|+ +++|++++.||.|++||+++++.+
T Consensus 68 ~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 68 PEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDL 147 (351)
T ss_dssp GGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCT
T ss_pred CCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHh
Confidence 6999999999999999999887 567888899999999999999 999999999999999999887654
Q ss_pred eecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceec
Q psy15549 270 SRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCL 349 (621)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~ 349 (621)
..+..... ..........+...+.+++|+|+.
T Consensus 148 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~p~~-------------------------------------- 179 (351)
T 3f3f_A 148 RSWTLTSE----------MKVLSIPPANHLQSDFCLSWCPSR-------------------------------------- 179 (351)
T ss_dssp TCCEEEEE----------EESCSCCCSSCSCCCEEEEECCCS--------------------------------------
T ss_pred cccccccc----------ccccccccCCcccceeEEEeccCC--------------------------------------
Confidence 43321000 000000111223334445554430
Q ss_pred CCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCce--eEEEecccccceEEEEEcCCC---
Q psy15549 350 PSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP--FAFIANIHYTKLTDITWSSDG--- 424 (621)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~h~~~v~~~~~spdg--- 424 (621)
..+..+++++.++.+.+|+...+.. +..+ .+|...|++++|+|++
T Consensus 180 -----------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~p~~~~~ 229 (351)
T 3f3f_A 180 -----------------------------FSPEKLAVSALEQAIIYQRGKDGKLHVAAKL-PGHKSLIRSISWAPSIGRW 229 (351)
T ss_dssp -----------------------------SSCCEEEEEETTEEEEEEECTTSCEEEEEEC-CCCCSCEEEEEECCCSSCS
T ss_pred -----------------------------CCCcEEEEecCCCcEEEEccCCCceeeeeec-CCCCcceeEEEECCCCCCc
Confidence 0135566677888887887777764 3334 4699999999999998
Q ss_pred -CeEEEEeCCCcEEEEEecCC----------------------------------------------cCCcccCCCCCcc
Q psy15549 425 -KVLIASSTDGYCSIISFGDN----------------------------------------------EIGIPYVPPSGEE 457 (621)
Q Consensus 425 -~~l~s~s~dg~i~iw~~~~~----------------------------------------------~~~~~~~~~~~~~ 457 (621)
++|++++.||.|++||+.++ +....+..|...+
T Consensus 230 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (351)
T 3f3f_A 230 YQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV 309 (351)
T ss_dssp SEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCE
T ss_pred ceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccE
Confidence 89999999999999999875 4556677788899
Q ss_pred cccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 458 SKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 458 ~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
..+.+++++..+++++.|+.+++|++..
T Consensus 310 ~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 310 WSVSWNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp EEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEEEEcCCCCEEEEecCCCcEEEEecCc
Confidence 9999999999999999999999999764
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=8.7e-31 Score=260.08 Aligned_cols=280 Identities=10% Similarity=0.031 Sum_probs=207.6
Q ss_pred EEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEE
Q psy15549 18 SVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLA 97 (621)
Q Consensus 18 ~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~la 97 (621)
...+.+++. +|++|+.||.|+ +||+.+++.... +. ...|.++.|+|+ ++
T Consensus 41 ~~~~~~d~~-----~l~sg~~Dg~v~--------------iwd~~~~~~~~~-------~~--~~~v~~~~~~~~---~~ 89 (343)
T 3lrv_A 41 NKSMYYDKW-----VCMCRCEDGALH--------------FTQLKDSKTITT-------IT--TPNPRTGGEHPA---II 89 (343)
T ss_dssp CSSSSEEEE-----EEEEEEETTEEE--------------EEEESSSSCEEE-------EE--EECCCTTCCCCS---EE
T ss_pred hhhhcCCCC-----EEEEECCCCcEE--------------EEECCCCcEEEE-------Ee--cCCceeeeeCCc---eE
Confidence 345667776 999999999999 888887654332 22 466888889888 77
Q ss_pred EEc-CCceEEEEeccCcc--ccccceecccc-cccCCCeEEEEECC--CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 98 SGD-DVGKEIWYLTERES--GIANVEFASDL-SRHQKAVNVVRFSP--NGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 98 s~~-d~~v~iw~~~~~~~--~~~~~~~~~~~-~~h~~~V~~i~~sp--~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
+++ |+.+++|+...... .......+..+ .+|...|.+++|+| ++++|++++.||+|++||+.+++..
T Consensus 90 s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~------- 162 (343)
T 3lrv_A 90 SRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQY------- 162 (343)
T ss_dssp EECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEE-------
T ss_pred EecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEE-------
Confidence 776 88899997663210 00000212222 35778999999999 9999999999999999999988752
Q ss_pred cccccccccceeeeeee-cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE-EEecc-CCcceEEEEEcCCCCE
Q psy15549 172 LDEENVNKEHWIVTKIL-RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL-GILTE-HKKFVQGVAWDPKNQY 248 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~-~~~~v~~l~~sp~~~~ 248 (621)
... ..|...|.+++|+|++.+|++|+.||.|++||+++++.+ ..+.. |...|.+++|+|++.+
T Consensus 163 --------------~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~ 228 (343)
T 3lrv_A 163 --------------IVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYW 228 (343)
T ss_dssp --------------EEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSE
T ss_pred --------------EEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCE
Confidence 222 346668999999999999999999999999999999887 78887 9999999999999999
Q ss_pred EEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccce--eeeeecCCCCeEEeccccccCCCC
Q psy15549 249 VATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFF--RRLTFSPDGQLLIAPSGCLENSDS 326 (621)
Q Consensus 249 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~spdg~~l~~~s~~~~~~d~ 326 (621)
|++++ |+.|++||+++++.+..+.... .+...+ .+++|+|+|++|+++++
T Consensus 229 l~s~~-~~~v~iwd~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~g~~l~~~s~------- 280 (343)
T 3lrv_A 229 MVVEC-DQTVVCFDLRKDVGTLAYPTYT--------------------IPEFKTGTVTYDIDDSGKNMIAYSN------- 280 (343)
T ss_dssp EEEEE-SSBEEEEETTSSTTCBSSCCCB--------------------C-----CCEEEEECTTSSEEEEEET-------
T ss_pred EEEEe-CCeEEEEEcCCCCcceeecccc--------------------cccccccceEEEECCCCCEEEEecC-------
Confidence 99999 5599999999876654432110 001111 35888888888877551
Q ss_pred CCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEE
Q psy15549 327 TRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAF 406 (621)
Q Consensus 327 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 406 (621)
.++.|++|++........
T Consensus 281 --------------------------------------------------------------~d~~i~v~~~~~~~~~~~ 298 (343)
T 3lrv_A 281 --------------------------------------------------------------ESNSLTIYKFDKKTKNWT 298 (343)
T ss_dssp --------------------------------------------------------------TTTEEEEEEECTTTCSEE
T ss_pred --------------------------------------------------------------CCCcEEEEEEcccccceE
Confidence 267788888766543332
Q ss_pred EecccccceEEEEEcC---CCCeEEEEeCCCcEEEEEecCC
Q psy15549 407 IANIHYTKLTDITWSS---DGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 407 ~~~~h~~~v~~~~~sp---dg~~l~s~s~dg~i~iw~~~~~ 444 (621)
. .++..++|++ +++.|++++.||.+.++-....
T Consensus 299 ~-----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~ 334 (343)
T 3lrv_A 299 K-----DEESALCLQSDTADFTDMDVVCGDGGIAAILKTND 334 (343)
T ss_dssp E-----EEEEECCC----CCCCEEEEEEETTEEEEEEECSS
T ss_pred e-----cCceeEecCccccccceeEEEecCCceEEEEecCC
Confidence 2 4678889998 8899999999999998875543
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-31 Score=261.13 Aligned_cols=303 Identities=11% Similarity=0.070 Sum_probs=201.2
Q ss_pred eEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEE
Q psy15549 58 IWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRF 137 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~ 137 (621)
||++...... ..+..|...|++++|+|||++||+|+++++++|+.... ..... .+...+..+++
T Consensus 3 i~s~~~~~~~-------~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~-------~~~~~--~~~~~~~~~~~ 66 (355)
T 3vu4_A 3 LGSMITRNPI-------VPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPV-------AHIMS--QEMRHLSKVRM 66 (355)
T ss_dssp -----------------------CCCCCEEEECTTSSEEEEECSSEEEEEEETTE-------EEEEE--EECSCCCEEEE
T ss_pred cccccccCCc-------cccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCc-------ceeee--eecCCeEEEEE
Confidence 6666655432 23688999999999999999999999889999998764 22222 22235788899
Q ss_pred CCCCCEE-EEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeE
Q psy15549 138 SPNGELL-ASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTA 216 (621)
Q Consensus 138 sp~g~~l-~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i 216 (621)
.++++++ ++++.|++|++||+.+++.+ ..+. +...|.+++|+++. ++++. ++.|
T Consensus 67 ~~~~~~~~~~~~~d~~v~iWd~~~~~~~---------------------~~~~-~~~~v~~v~~~~~~--~~~~~-~~~i 121 (355)
T 3vu4_A 67 LHRTNYVAFVTGVKEVVHIWDDVKKQDV---------------------SRIK-VDAPVKDLFLSREF--IVVSY-GDVI 121 (355)
T ss_dssp CTTSSEEEEECSSTTEEEEEETTTTEEE---------------------EEEE-CSSCEEEEEECSSE--EEEEE-TTEE
T ss_pred cCCCCEEEEEECCccEEEEEECCCCcEE---------------------EEEE-CCCceEEEEEcCCE--EEEEE-cCEE
Confidence 9988877 56778899999999988753 2333 66789999999864 44443 7899
Q ss_pred EEEECCCC-cEEEEeccCCcceEEEEEcCCCCEEEE--EeCCCcEEEEEccCceeeeecccCCCCCCCcccccccccc-c
Q psy15549 217 IMWDVHKG-KNLGILTEHKKFVQGVAWDPKNQYVAT--LSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVP-L 292 (621)
Q Consensus 217 ~vwd~~~~-~~~~~~~~~~~~v~~l~~sp~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 292 (621)
++||+.++ +.+..+.. ....+++++ .++++ |+.||.|++||+.++.......... ......+ +
T Consensus 122 ~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~--------~~~~~~p~~ 188 (355)
T 3vu4_A 122 SVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGV--------QQKAILGKG 188 (355)
T ss_dssp EEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC--------------------------CC
T ss_pred EEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccc--------cccccCccc
Confidence 99999988 66655544 445567777 66666 5789999999998765321110000 0000001 1
Q ss_pred cccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCC
Q psy15549 293 FHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSD 372 (621)
Q Consensus 293 ~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (621)
.....|...|.+++|+|+|++|++
T Consensus 189 ~~~~~h~~~v~~~~~s~~g~~l~s-------------------------------------------------------- 212 (355)
T 3vu4_A 189 VLIKAHTNPIKMVRLNRKSDMVAT-------------------------------------------------------- 212 (355)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEE--------------------------------------------------------
T ss_pred EEEEccCCceEEEEECCCCCEEEE--------------------------------------------------------
Confidence 122344556666777766666555
Q ss_pred CCCCccCCCcEEEEEEcCCc-EEEEeCCCCceeEEEecc-cccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCccc
Q psy15549 373 DKPLFKLPYRIVIAVATENN-ILLYDTQHASPFAFIANI-HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY 450 (621)
Q Consensus 373 ~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~-h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~ 450 (621)
++.|++ |++||+.+++.+..+..+ |...|++++|+|+|++|++++.||+|++||+..+......
T Consensus 213 --------------~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~ 278 (355)
T 3vu4_A 213 --------------CSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRH 278 (355)
T ss_dssp --------------EETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSE
T ss_pred --------------EeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccc
Confidence 457898 999999999999988645 9999999999999999999999999999999865422111
Q ss_pred C--C---------------------CCCcccccCCCCCCCCcccCCCcccHHHhccc
Q psy15549 451 V--P---------------------PSGEESKENDPTKGEPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 451 ~--~---------------------~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~ 484 (621)
. . .......+.+++++..++....|+.+++|...
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 279 ALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp ETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred cccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 0 0 01112445677888878877788888887754
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-28 Score=233.45 Aligned_cols=262 Identities=15% Similarity=0.118 Sum_probs=179.0
Q ss_pred eEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc--CCce-EEEEeccCccccccceecccccccCCCeEE
Q psy15549 58 IWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD--DVGK-EIWYLTERESGIANVEFASDLSRHQKAVNV 134 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~--d~~v-~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 134 (621)
+|+..++. .++...++..|..+|..+.|.||-.-|++.. .=.+ .++.+.-..... .+.....-.+|...|..
T Consensus 67 lw~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~-~~~~~l~s~g~~~~v~~ 141 (356)
T 2w18_A 67 LWKALDAW----QWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDE-SEKQVLLKSGNIKAVLG 141 (356)
T ss_dssp EEEESSSS----BEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-------CCEEEEEEEEEEEEEE
T ss_pred EcccCCCc----cceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCcc-ccccEEEeCCCeEEEEe
Confidence 99988762 4556777899999999999999754333322 2111 222222111000 00111111344445554
Q ss_pred EEECCCCCEEEEEe--CCCcEEEEEccC-CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC---CCCEEE
Q psy15549 135 VRFSPNGELLASGD--DESTIIVWKQKT-DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP---TSTHLI 208 (621)
Q Consensus 135 i~~sp~g~~l~s~s--~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp---d~~~l~ 208 (621)
+ ++++++.+++ .|+.|++|++.. ++. ...+.+|...++.++|++ ++.+|+
T Consensus 142 l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~---------------------~~s~~~~~~~v~~l~fs~~~g~~~~La 197 (356)
T 2w18_A 142 L---TKRRLVSSSGTLSDQQVEVMTFAEDGGG---------------------KENQFLMPPEETILTFAEVQGMQEALL 197 (356)
T ss_dssp E---TTTEEEEEESSSTTCEEEEEEECTTSCE---------------------EEEEEECCCSSCEEEEEEEETSTTEEE
T ss_pred c---CCCcEEEecccCCCCcEEEEEECCCCce---------------------eeeeccCCCceeeEEeeccCCCCceEE
Confidence 4 5666666643 589999999854 442 355678999999999999 779999
Q ss_pred EEeCCCeEEEEECCCCcEEEEeccCCc---ceEEEEEcCCCCEE------------EEEeCCCcEEEEEccCceeeeecc
Q psy15549 209 SGSVDNTAIMWDVHKGKNLGILTEHKK---FVQGVAWDPKNQYV------------ATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 209 s~~~dg~i~vwd~~~~~~~~~~~~~~~---~v~~l~~sp~~~~l------------~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
+++.|++|+|||+.++++++++.+|.. .+.+++|+|+|.++ ++|+.|++|++||..+++.+..+
T Consensus 198 SgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~- 276 (356)
T 2w18_A 198 GTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM- 276 (356)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE-
T ss_pred EecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE-
Confidence 999999999999999999999986543 57778999999886 56778899999999888765432
Q ss_pred cCCCCCCCccccccccccccccCCcccceeeeeecCCCCe--EEeccccccCCCCCCcceeeeeeeeecccCCCceecCC
Q psy15549 274 RSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL--LIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPS 351 (621)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~--l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~ 351 (621)
.+++ |+|.. ++.+.
T Consensus 277 ------------------------------~~~~-p~Gh~~~~lsg~--------------------------------- 292 (356)
T 2w18_A 277 ------------------------------LYCL-PPGQAGRFLEGD--------------------------------- 292 (356)
T ss_dssp ------------------------------EECC-CTTCCCCEEEEE---------------------------------
T ss_pred ------------------------------Eeec-cCCCcceeEccc---------------------------------
Confidence 1222 33321 11111
Q ss_pred cccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceE-EEEEcCCCCeEEEE
Q psy15549 352 LQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLT-DITWSSDGKVLIAS 430 (621)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~-~~~~spdg~~l~s~ 430 (621)
..+..+++++.|++|+|||+.+++.+..+. +|...+. .++|||||++|++|
T Consensus 293 ---------------------------~sg~~lASgS~DgTIkIWDl~tGk~l~tL~-gH~~~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 293 ---------------------------VKDHCAAAILTSGTIAIWDLLLGQCTALLP-PVSDQHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp ---------------------------EETTEEEEEETTSCEEEEETTTCSEEEEEC-CC--CCCCEEEECSSSSEEEEE
T ss_pred ---------------------------cCCCEEEEEcCCCcEEEEECCCCcEEEEec-CCCCCeEEEEEECCCCCEEEEE
Confidence 013567888899999999999999999884 5776555 68999999999999
Q ss_pred eCCCcEEEEEe
Q psy15549 431 STDGYCSIISF 441 (621)
Q Consensus 431 s~dg~i~iw~~ 441 (621)
+.|++|+|||+
T Consensus 345 S~D~TIklWd~ 355 (356)
T 2w18_A 345 QKDGNIFVYHY 355 (356)
T ss_dssp CTTSCEEEEEE
T ss_pred ECCCcEEEecC
Confidence 99999999996
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-29 Score=254.45 Aligned_cols=333 Identities=15% Similarity=0.110 Sum_probs=244.5
Q ss_pred CcEEEEE---EccCCCEEEEEc---------------CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCE
Q psy15549 82 KAVNVVR---FSPNGELLASGD---------------DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGEL 143 (621)
Q Consensus 82 ~~V~~l~---~spdg~~las~~---------------d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~ 143 (621)
..+..++ |+|++..++..+ ++.+.||.+..... .+.....+..+ ..+.+++|+|++.+
T Consensus 61 ~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~---~~~~~~~~~~~-~~~~~~~~s~~~~~ 136 (433)
T 3bws_A 61 IALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGI---THRFISRFKTG-FQPKSVRFIDNTRL 136 (433)
T ss_dssp EEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTC---SEEEEEEEECS-SCBCCCEESSSSEE
T ss_pred CccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCC---cceEEEEEcCC-CCceEEEEeCCCeE
Confidence 4566666 777766555432 22235666544211 11333334333 44668999997778
Q ss_pred EEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC
Q psy15549 144 LASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK 223 (621)
Q Consensus 144 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~ 223 (621)
+++++.++.|++||+.+++....+. ...+.+|...|.+++|++++.++++++.|+.|++||+.+
T Consensus 137 ~~~~~~~~~i~~~d~~~g~~~~~~~----------------~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 137 AIPLLEDEGMDVLDINSGQTVRLSP----------------PEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp EEEBTTSSSEEEEETTTCCEEEECC----------------CHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred EEEeCCCCeEEEEECCCCeEeeecC----------------cccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 8888889999999999887542110 013458899999999999999999999999999999999
Q ss_pred CcEEEEeccCCcceEEEEEcCCCCEEEEEe-CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccce
Q psy15549 224 GKNLGILTEHKKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFF 302 (621)
Q Consensus 224 ~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 302 (621)
++.+..+..|...+.+++|+|+++++++++ .|+.|++||+++++.+..+.. ...+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~------------------------~~~~ 256 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK------------------------IGLP 256 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC------------------------CSEE
T ss_pred ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC------------------------CCCc
Confidence 999999988999999999999999886555 799999999999887766532 2236
Q ss_pred eeeeecCCCCeEEeccccc-c--CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccC
Q psy15549 303 RRLTFSPDGQLLIAPSGCL-E--NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKL 379 (621)
Q Consensus 303 ~~~~~spdg~~l~~~s~~~-~--~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (621)
.+++|+|+|+++++++... . ..|+.+++|++..... .....+...+..+.|+|
T Consensus 257 ~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~--------~~~~~~~~~~~~~~~~~---------------- 312 (433)
T 3bws_A 257 RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL--------IDTIGPPGNKRHIVSGN---------------- 312 (433)
T ss_dssp EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE--------EEEEEEEECEEEEEECS----------------
T ss_pred eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE--------EeeccCCCCcceEEECC----------------
Confidence 8999999999998876210 0 0266788888652211 11112223444555554
Q ss_pred CCcEE-EEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeC---------------CCcEEEEEecC
Q psy15549 380 PYRIV-IAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASST---------------DGYCSIISFGD 443 (621)
Q Consensus 380 ~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~---------------dg~i~iw~~~~ 443 (621)
+++.+ ++++.++.|++||+.+++.+..+. +...+.+++|+|+|++|++++. ||.|++||+.+
T Consensus 313 ~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 313 TENKIYVSDMCCSKIEVYDLKEKKVQKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred CCCEEEEEecCCCEEEEEECCCCcEEEEec--CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 55555 455779999999999998887774 6678999999999999988876 57999999999
Q ss_pred CcCCcccCCCCCcccccCCCCCCCCcccCC-CcccHHHhcccC
Q psy15549 444 NEIGIPYVPPSGEESKENDPTKGEPVRSED-KPRSAEQAKGEG 485 (621)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~~~w~~~~ 485 (621)
++....+..+ ..+..+.+++++..++.++ .++.+++|++.+
T Consensus 391 ~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 391 DTVKEFWEAG-NQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TEEEEEEECS-SSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CcEEEEecCC-CCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9888777663 4567888999999887665 599999998753
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-30 Score=252.48 Aligned_cols=278 Identities=11% Similarity=0.050 Sum_probs=200.7
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
...+.+++.+|++|+ |+.|++|++..+ ..+..+. ...|.++.|+|+ +++++.|++|++|+......+
T Consensus 41 ~~~~~~d~~~l~sg~~Dg~v~iwd~~~~-------~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~ 108 (343)
T 3lrv_A 41 NKSMYYDKWVCMCRCEDGALHFTQLKDS-------KTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITI 108 (343)
T ss_dssp CSSSSEEEEEEEEEEETTEEEEEEESSS-------SCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEE
T ss_pred hhhhcCCCCEEEEECCCCcEEEEECCCC-------cEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEE
Confidence 334567888999988 999999999876 3333333 456788889888 999999999999987643211
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCcceEEEE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP--TSTHLISGSVDNTAIMWDVHKGKNLGILT-EHKKFVQGVA 241 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp--d~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~l~ 241 (621)
..+... ........+|...|.+++|+| ++++|++++.||.|++||+++++.+.... .+...|.+++
T Consensus 109 ~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~ 177 (343)
T 3lrv_A 109 LDSKTN-----------KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGV 177 (343)
T ss_dssp EETTTC-----------CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEE
T ss_pred eecCCc-----------ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEE
Confidence 000000 001123346778999999999 99999999999999999999999877664 4555899999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCceee-eecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 242 WDPKNQYVATLSSDRSLRTYSIQSKKVI-SRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
|+|++.+|++|+.||.|++||+++++.+ ..+.. .|...|.+++|+|+|.+|++++
T Consensus 178 ~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~----------------------~h~~~v~~l~fs~~g~~l~s~~-- 233 (343)
T 3lrv_A 178 LHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV----------------------DEEAKIKEVKFADNGYWMVVEC-- 233 (343)
T ss_dssp ECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC----------------------CTTSCEEEEEECTTSSEEEEEE--
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec----------------------cCCCCEEEEEEeCCCCEEEEEe--
Confidence 9999999999999999999999988765 44421 2456789999999988877654
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
++.|++||+++
T Consensus 234 ---------------------------------------------------------------------~~~v~iwd~~~ 244 (343)
T 3lrv_A 234 ---------------------------------------------------------------------DQTVVCFDLRK 244 (343)
T ss_dssp ---------------------------------------------------------------------SSBEEEEETTS
T ss_pred ---------------------------------------------------------------------CCeEEEEEcCC
Confidence 34888888888
Q ss_pred CceeEEEec--ccccce--EEEEEcCCCCeEEEEeC-CCcEEEEEecCCcCCcccCCCCCcccccCCCC---CCCCcccC
Q psy15549 401 ASPFAFIAN--IHYTKL--TDITWSSDGKVLIASST-DGYCSIISFGDNEIGIPYVPPSGEESKENDPT---KGEPVRSE 472 (621)
Q Consensus 401 ~~~~~~~~~--~h~~~v--~~~~~spdg~~l~s~s~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~ 472 (621)
++.+..+.. .|...+ .+++|+|+|++|++++. |+.|++|++..+...-.. ..+..+.+.+ +...++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~ 320 (343)
T 3lrv_A 245 DVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVV 320 (343)
T ss_dssp STTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEE
T ss_pred CCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEE
Confidence 766544321 133333 46999999999999998 999999999765432211 3445566666 66777777
Q ss_pred CCcccHHHhcc
Q psy15549 473 DKPRSAEQAKG 483 (621)
Q Consensus 473 ~~~~~~~~w~~ 483 (621)
..++.+.++-.
T Consensus 321 ~~d~~~~~~~~ 331 (343)
T 3lrv_A 321 CGDGGIAAILK 331 (343)
T ss_dssp EETTEEEEEEE
T ss_pred ecCCceEEEEe
Confidence 77777776643
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-29 Score=253.01 Aligned_cols=262 Identities=13% Similarity=0.122 Sum_probs=173.4
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc---
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--- 91 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp--- 91 (621)
.+....+++++. +||+|+.|+.|+ |||...+.... ......+.+|.+.|++++|+|
T Consensus 91 ~~~~~~~~~~~~-----~las~~~d~~v~--------------lw~~~~~~~~~--~~~~~~~~gH~~~v~~v~~~p~~~ 149 (393)
T 4gq1_A 91 DGNVNSSPVYSL-----FLACVCQDNTVR--------------LIITKNETIIT--QHVLGGKSGHHNFVNDIDIADVYS 149 (393)
T ss_dssp ------CCEEEE-----EEEEEETTSCEE--------------EEEEETTEEEE--EEEECTTTSCSSCEEEEEEEEEEC
T ss_pred CcceeecCCCCC-----EEEEEeCCCcEE--------------EEECCCCccce--eeeecccCCCCCceEEEEEccccc
Confidence 334444555665 999999999999 99988765432 234556899999999999998
Q ss_pred -----CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCC-EEEEEeCCCcEEEEEccCCCCC
Q psy15549 92 -----NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE-LLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 92 -----dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~-~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
|+++||+|+ |+.|+|||+..+ .....+..|...|.+++|+|++. +|++++.|++|++||+.+++..
T Consensus 150 ~~~~~d~~~las~s~D~tv~~Wd~~~~-------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~ 222 (393)
T 4gq1_A 150 ADNRLAEQVIASVGDDCTLIIWRLTDE-------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSA 222 (393)
T ss_dssp TTCSEEEEEEEEEETTSEEEEEEEETT-------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC--
T ss_pred cccCCCCCEEEEEECCCeEEEEECCCC-------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccc
Confidence 899999998 889999999876 55566778899999999999874 8999999999999999988765
Q ss_pred CCCCCCCccccc----ccccceeeeeeecCCCCCeEEEEEC-CCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEE
Q psy15549 165 PEFPSSNLDEEN----VNKEHWIVTKILRGHLEDVYDISWS-PTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQG 239 (621)
Q Consensus 165 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~i~~s-pd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 239 (621)
............ .............+|...+.++.|+ |+++.|++++.|+.+++||+..+.....+..|...+..
T Consensus 223 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~ 302 (393)
T 4gq1_A 223 EENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGP 302 (393)
T ss_dssp --------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------------------
T ss_pred ccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCcccc
Confidence 433211100000 0000011122345788899999986 79999999999999999999888766666555444433
Q ss_pred EE------------------EcC--CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcc
Q psy15549 240 VA------------------WDP--KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMK 299 (621)
Q Consensus 240 l~------------------~sp--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (621)
+. |+| ++.++++|+.||.|++||+.+++....+. .+.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~-----------------------~~~ 359 (393)
T 4gq1_A 303 KNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI-----------------------QLG 359 (393)
T ss_dssp -CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE-----------------------ECS
T ss_pred EEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec-----------------------CCC
Confidence 33 333 33456778889999999999887665543 234
Q ss_pred cceeeeeecCCCCeEEeccccccCCCCCCcceee
Q psy15549 300 SFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISV 333 (621)
Q Consensus 300 ~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~ 333 (621)
..|.+++|+|||++||+++ . +.+.+|.+
T Consensus 360 ~~V~svafspdG~~LA~as-----~-~Gv~lvrL 387 (393)
T 4gq1_A 360 MPIVDFCWHQDGSHLAIAT-----E-GSVLLTRL 387 (393)
T ss_dssp SCEEEEEECTTSSEEEEEE-----S-SEEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEe-----C-CCeEEEEE
Confidence 4679999999999999987 3 44555544
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-28 Score=230.22 Aligned_cols=299 Identities=9% Similarity=-0.002 Sum_probs=207.6
Q ss_pred cEEEEEEccCCC---EEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcEE-EEE
Q psy15549 83 AVNVVRFSPNGE---LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTII-VWK 157 (621)
Q Consensus 83 ~V~~l~~spdg~---~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~-vwd 157 (621)
.+.++-|-.-|- -+++++...|++|+..... .++.++.+.+|..+|..+.+.||..-|++.. ..-.+. ++-
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~s 116 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAW----QWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRA 116 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSS----BEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEE
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCc----cceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEE
Confidence 456666755443 5778889999999998752 4577888999999999999999654333322 111111 111
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe--CCCeEEEEEC-CCCcEEEEeccCC
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS--VDNTAIMWDV-HKGKNLGILTEHK 234 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~--~dg~i~vwd~-~~~~~~~~~~~~~ 234 (621)
+.-...- ..+.......+|...|..+ ++++++.+++ .|+.|++|++ .+++.+..+..|.
T Consensus 117 la~spd~---------------~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~ 178 (356)
T 2w18_A 117 LFCSSDD---------------ESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMP 178 (356)
T ss_dssp ECC---------------------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECC
T ss_pred EEECCCc---------------cccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCC
Confidence 1111000 0000011113344445444 5666555544 5999999999 4588888888999
Q ss_pred cceEEEEEcC---CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC
Q psy15549 235 KFVQGVAWDP---KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 235 ~~v~~l~~sp---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 311 (621)
..++.++|+| ++.+|++++.|++|+|||+.+++.++.+..+... ...+.+++|+|+|
T Consensus 179 ~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~--------------------v~~v~~vafSpdG 238 (356)
T 2w18_A 179 PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSY--------------------QASVCHKAYSEMG 238 (356)
T ss_dssp CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-----------------------CCCEEEEEEETT
T ss_pred CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcc--------------------eeeeEEEEECCCC
Confidence 9999999999 7799999999999999999999999888543211 1245778999999
Q ss_pred CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
.++++++ .+.. + ..+++++.|+
T Consensus 239 ~~lvs~s-----~~~~--~---------------------------------------------------w~laSGs~D~ 260 (356)
T 2w18_A 239 LLFIVLS-----HPCA--K---------------------------------------------------ESESLRSPVF 260 (356)
T ss_dssp EEEEEEC----------------------------------------------------------------------CCE
T ss_pred CEEEEec-----cCCC--c---------------------------------------------------ceeeccCCCc
Confidence 9998876 1111 1 1367788899
Q ss_pred cEEEEeCCCCceeEEE----ecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCccc-ccCCCCCC
Q psy15549 392 NILLYDTQHASPFAFI----ANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEES-KENDPTKG 466 (621)
Q Consensus 392 ~i~iwd~~~~~~~~~~----~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 466 (621)
+|++||..+++.+..+ ..+|...+.+..++ +.++|+++.||+|+|||+.++++...+.+|...+. .+.|+|+|
T Consensus 261 tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG 338 (356)
T 2w18_A 261 QLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTD 338 (356)
T ss_dssp EEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSS
T ss_pred EEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCC
Confidence 9999999999877655 24676665555554 88999999999999999999999999998877655 47899999
Q ss_pred CCcccCCCcccHHHhcc
Q psy15549 467 EPVRSEDKPRSAEQAKG 483 (621)
Q Consensus 467 ~~~~s~~~~~~~~~w~~ 483 (621)
+.+++++.|++|++|+.
T Consensus 339 ~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 339 SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SEEEEECTTSCEEEEEE
T ss_pred CEEEEEECCCcEEEecC
Confidence 99999999999999974
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-28 Score=246.16 Aligned_cols=305 Identities=13% Similarity=0.082 Sum_probs=231.4
Q ss_pred CCeEEEeccccccCCcceEEEEec----CCc----eEEeeeccCccccccceeEEe--ccccccccceeeccccccccCc
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGG----ADS----HVFDYLLKIPHRLKTGKIWYL--TERESGIANVEFASDLSRHQKA 83 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~----~dg----~v~~~d~~~~~~~~~~~iw~~--~~~~~~~~~~~~~~~~~~h~~~ 83 (621)
..+...+|++.+. .++++|+ .+| .|+ |||+ .+++... ...+.+|...
T Consensus 63 ~~~~~~~w~~~g~----~~~~~g~~~~~~~G~~~~~i~--------------lwd~~~~~~~~~~-----~~~~~~~~~~ 119 (415)
T 2hqs_A 63 QEVQPAAWSALGI----DAVVVGQVTPNPDGSYNVAYQ--------------LVDTGGAPGTVLA-----QNSYKVNKQW 119 (415)
T ss_dssp GGCCHHHHHTTTC----CEEEEEEEEECTTSCEEEEEE--------------EEECSSSTTCEEE-----EEEEEECGGG
T ss_pred cCcCHHHHHhcCC----CEEEEEEEEECCCCeEEEEEE--------------EEeCCCCCCCEEe-----eeEEEcChhH
Confidence 4678888988886 4777876 467 777 8888 6665321 1346778888
Q ss_pred EEEEEEcc--------------CCCEEEEEc-C------CceEEEEeccCccccccceecccccccCCCeEEEEECCCCC
Q psy15549 84 VNVVRFSP--------------NGELLASGD-D------VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 142 (621)
Q Consensus 84 V~~l~~sp--------------dg~~las~~-d------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~ 142 (621)
+..+++++ .+..++.++ + +.|++|++... ....+.+|...|.+++|+|+|+
T Consensus 120 ~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~--------~~~~l~~~~~~v~~~~~Spdg~ 191 (415)
T 2hqs_A 120 LRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY--------NQFVVHRSPQPLMSPAWSPDGS 191 (415)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC--------SCEEEEEESSCEEEEEECTTSS
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC--------CCEEEeCCCCcceeeEEcCCCC
Confidence 88777765 155666554 3 57899998742 3456678999999999999999
Q ss_pred EEEEEeCCC---cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE-EEeCCC--eE
Q psy15549 143 LLASGDDES---TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI-SGSVDN--TA 216 (621)
Q Consensus 143 ~l~s~s~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~-s~~~dg--~i 216 (621)
+|++++.++ .|++||+.+++. ..+..|...+.+++|+|||++|+ +++.++ .|
T Consensus 192 ~la~~s~~~~~~~i~~~d~~tg~~----------------------~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i 249 (415)
T 2hqs_A 192 KLAYVTFESGRSALVIQTLANGAV----------------------RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNL 249 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCE----------------------EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred EEEEEEecCCCcEEEEEECCCCcE----------------------EEeecCCCcccCEEEcCCCCEEEEEEecCCCceE
Confidence 999999875 999999998763 34567788899999999999888 666555 49
Q ss_pred EEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeC-CC--cEEEEEccCceeeeecccCCCCCCCcccccccccccc
Q psy15549 217 IMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS-DR--SLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLF 293 (621)
Q Consensus 217 ~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (621)
++||+.+++. ..+..|...+.+++|+|+|++|++++. ++ .|.+||+.+++... +.
T Consensus 250 ~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~-------------------- 307 (415)
T 2hqs_A 250 YVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-IT-------------------- 307 (415)
T ss_dssp EEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-CC--------------------
T ss_pred EEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-Ee--------------------
Confidence 9999988876 567778889999999999999998886 44 67777887765322 21
Q ss_pred ccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCC
Q psy15549 294 HDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDD 373 (621)
Q Consensus 294 ~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (621)
.+...+.+++|+|||++|++++. +
T Consensus 308 ---~~~~~~~~~~~spdG~~l~~~~~-----~------------------------------------------------ 331 (415)
T 2hqs_A 308 ---WEGSQNQDADVSSDGKFMVMVSS-----N------------------------------------------------ 331 (415)
T ss_dssp ---CSSSEEEEEEECTTSSEEEEEEE-----C------------------------------------------------
T ss_pred ---cCCCcccCeEECCCCCEEEEEEC-----c------------------------------------------------
Confidence 11235678999999999987661 0
Q ss_pred CCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCC---cEEEEEecCCcCCccc
Q psy15549 374 KPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDG---YCSIISFGDNEIGIPY 450 (621)
Q Consensus 374 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg---~i~iw~~~~~~~~~~~ 450 (621)
..+..|++||+.+++.. .+ ..|. .+.+++|+|||++|++++.++ .|++|++. +.....+
T Consensus 332 --------------~g~~~i~~~d~~~~~~~-~l-~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l 393 (415)
T 2hqs_A 332 --------------GGQQHIAKQDLATGGVQ-VL-SSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARL 393 (415)
T ss_dssp --------------SSCEEEEEEETTTCCEE-EC-CCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEEC
T ss_pred --------------CCceEEEEEECCCCCEE-Ee-cCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEe
Confidence 01357999999988764 33 2343 899999999999999988777 79999987 5556778
Q ss_pred CCCCCcccccCCCCCCC
Q psy15549 451 VPPSGEESKENDPTKGE 467 (621)
Q Consensus 451 ~~~~~~~~~~~~~~~~~ 467 (621)
..+.+.+..+.|+|...
T Consensus 394 ~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 394 PATDGQVKFPAWSPYLH 410 (415)
T ss_dssp CCSSSEEEEEEECCCCC
T ss_pred eCCCCCCcCCccccccc
Confidence 88888898888888654
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-27 Score=245.70 Aligned_cols=348 Identities=12% Similarity=0.098 Sum_probs=243.2
Q ss_pred eccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEE
Q psy15549 20 DIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG 99 (621)
Q Consensus 20 ~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~ 99 (621)
+|+|++. ++++++.|+.|. +||..+++... ++..+.. +.+++|+|||++|+++
T Consensus 144 ~~~p~~~-----~~vs~~~d~~V~--------------v~D~~t~~~~~-------~i~~g~~-~~~v~~spdg~~l~v~ 196 (543)
T 1nir_A 144 DLDLPNL-----FSVTLRDAGQIA--------------LVDGDSKKIVK-------VIDTGYA-VHISRMSASGRYLLVI 196 (543)
T ss_dssp CCCGGGE-----EEEEEGGGTEEE--------------EEETTTCCEEE-------EEECSTT-EEEEEECTTSCEEEEE
T ss_pred ccCCCCE-----EEEEEcCCCeEE--------------EEECCCceEEE-------EEecCcc-cceEEECCCCCEEEEE
Confidence 4899997 999999999999 88877665432 2442222 8899999999999998
Q ss_pred c-CCceEEEEe--ccCccccccceecccccccCCCeEEEEECC----CCCEEEEEe-CCCcEEEEEccCCCCCCCCCCCC
Q psy15549 100 D-DVGKEIWYL--TERESGIANVEFASDLSRHQKAVNVVRFSP----NGELLASGD-DESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 100 ~-d~~v~iw~~--~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp----~g~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
+ ++.|.+||+ .+. ..+..+. +...+..++|+| +|++|++++ .+++|.+||..+.+.+..++...
T Consensus 197 ~~d~~V~v~D~~~~t~-------~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g 268 (543)
T 1nir_A 197 GRDARIDMIDLWAKEP-------TKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRG 268 (543)
T ss_dssp ETTSEEEEEETTSSSC-------EEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCE
T ss_pred CCCCeEEEEECcCCCC-------cEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccC
Confidence 8 888999999 443 4455555 345689999999 999999988 48999999998887653321000
Q ss_pred cccccccccceeeeeeecCC-CCCeEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEE--EeccCCcceEEEEEcCCCC
Q psy15549 172 LDEENVNKEHWIVTKILRGH-LEDVYDISWSPTSTH-LISGSVDNTAIMWDVHKGKNLG--ILTEHKKFVQGVAWDPKNQ 247 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~-~~~v~~i~~spd~~~-l~s~~~dg~i~vwd~~~~~~~~--~~~~~~~~v~~l~~sp~~~ 247 (621)
... .....| ...+.++.++|++.. +++...++.|.+||+.+.+.+. .+ .+...+..++|+|+|+
T Consensus 269 ~~~-----------~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 269 MTV-----------DTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHR 336 (543)
T ss_dssp ECS-----------SSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSC
T ss_pred ccc-----------CccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCC
Confidence 000 000002 337899999997765 5566678999999998865443 44 3566688899999999
Q ss_pred EEEEEe-CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC-CCeEEeccccccCCC
Q psy15549 248 YVATLS-SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD-GQLLIAPSGCLENSD 325 (621)
Q Consensus 248 ~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd-g~~l~~~s~~~~~~d 325 (621)
+|++++ .+++|.+||+.+++++..+.....+ +......+ ++|+ |..++++.. .+
T Consensus 337 ~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~p-------------------h~g~g~~~-~~p~~g~~~~s~~~----~d 392 (543)
T 1nir_A 337 YFMTAANNSNKVAVIDSKDRRLSALVDVGKTP-------------------HPGRGANF-VHPKYGPVWSTSHL----GD 392 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSB-------------------CCTTCEEE-EETTTEEEEEEEBS----SS
T ss_pred EEEEEecCCCeEEEEECCCCeEEEeeccCCCC-------------------CCCCCccc-CCCCCccEEEeccC----CC
Confidence 877665 5889999999999988776532211 11111122 4677 555555431 47
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE-------cCCcEEEEeC
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA-------TENNILLYDT 398 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~dg~i~iwd~ 398 (621)
+++.+|+....-........+..+..+......+.++| ++++|+++. .+++|.+||+
T Consensus 393 ~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~p----------------dg~~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 393 GSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHP----------------KSSHLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCT----------------TCCEEEECCTTCSSHHHHTCEEEEET
T ss_pred ceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCC----------------CCCcEEEecCCCCCcccCceEEEEEC
Confidence 88999987631111111233344444544455556665 778888876 2679999999
Q ss_pred CCCcee-EEEe-------cccccceEEEEEcCCCCeEEEEe-----CCCcEEEEEecCCcCCcccCCCC
Q psy15549 399 QHASPF-AFIA-------NIHYTKLTDITWSSDGKVLIASS-----TDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 399 ~~~~~~-~~~~-------~~h~~~v~~~~~spdg~~l~s~s-----~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
.+++.. ..+. ..+...+..++|+|||+.|+++. .|+.|.|||..++++...+..+.
T Consensus 457 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 457 KNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp TCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred CCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCC
Confidence 999877 4431 23567899999999999988763 47999999999999988877543
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-26 Score=232.21 Aligned_cols=223 Identities=13% Similarity=0.151 Sum_probs=175.5
Q ss_pred CCCeEEEeccccccCCcceEE-EEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRI-VTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l-~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
...+.+++|+|+++ +| ++++.|+.|+ +||+.+++... .+..+. .|.+++|+|
T Consensus 31 ~~~~~~~~~s~dg~-----~l~~~~~~d~~i~--------------v~d~~~~~~~~-------~~~~~~-~v~~~~~sp 83 (391)
T 1l0q_A 31 GSNPMGAVISPDGT-----KVYVANAHSNDVS--------------IIDTATNNVIA-------TVPAGS-SPQGVAVSP 83 (391)
T ss_dssp SSSEEEEEECTTSS-----EEEEEEGGGTEEE--------------EEETTTTEEEE-------EEECSS-SEEEEEECT
T ss_pred CCCcceEEECCCCC-----EEEEECCCCCeEE--------------EEECCCCeEEE-------EEECCC-CccceEECC
Confidence 34699999999998 65 7788999999 88887665432 244343 899999999
Q ss_pred CCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEE-EEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 92 NGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL-ASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 92 dg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l-~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
++++|++++ ++.|++|++..+ .....+.. ...+.+++|+|++++| ++++.++.|++||+.+++..
T Consensus 84 dg~~l~~~~~~~~~v~v~d~~~~-------~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~---- 151 (391)
T 1l0q_A 84 DGKQVYVTNMASSTLSVIDTTSN-------TVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI---- 151 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTT-------EEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE----
T ss_pred CCCEEEEEECCCCEEEEEECCCC-------eEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE----
Confidence 999886544 688999999876 44444443 4578999999999977 67888999999999887643
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL-ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~ 247 (621)
..+..+ ..+.+++|+|++++| ++++.++.|++||+.+++.+..+. +...+.+++|+|+++
T Consensus 152 -----------------~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~ 212 (391)
T 1l0q_A 152 -----------------NTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGT 212 (391)
T ss_dssp -----------------EEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSS
T ss_pred -----------------EEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCC
Confidence 333333 457999999999887 567788999999999998887775 556789999999999
Q ss_pred EEEEEe---CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 248 YVATLS---SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 248 ~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
+|++++ .++.|++||+.+++.+..+..+ ..+.+++|+|+|++++++
T Consensus 213 ~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~------------------------~~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 213 KAYVTNVDKYFNTVSMIDTGTNKITARIPVG------------------------PDPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp EEEEEEECSSCCEEEEEETTTTEEEEEEECC------------------------SSEEEEEECTTSSEEEEE
T ss_pred EEEEEecCcCCCcEEEEECCCCeEEEEEecC------------------------CCccEEEEccCCCEEEEE
Confidence 999888 6899999999998877665422 134789999999887544
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-27 Score=270.68 Aligned_cols=371 Identities=8% Similarity=-0.004 Sum_probs=265.1
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCC----ceEEeeeccCccccccceeEEeccccccccceeecccccccc
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGAD----SHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ 81 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~d----g~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~ 81 (621)
+..+..|...|.+++|||||+ +||+++.+ +...|| +|++.++.. ..+..|.
T Consensus 45 ~~~lt~~~~~v~~~~~SPDG~-----~la~~s~~~~~~~~~~i~------------~~d~~~g~~--------~~lt~~~ 99 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFPDGR-----KIAIRVMRGSSLNTADLY------------FYNGENGEI--------KRITYFS 99 (1045)
T ss_dssp EEEEECSSSEEEEEEECTTSS-----EEEEEEEESTTCCEEEEE------------EEETTTTEE--------EECCCCC
T ss_pred EEEeeeCCCcccCeEECCCCC-----EEEEEEeeccCCCCCeEE------------EEECCCCCe--------EEcccCC
Confidence 345567888999999999999 99987643 433433 888876542 2367788
Q ss_pred CcE-------EEEEEccCCCEEEEEcC-----C--ceEEEEeccCccccccc----------------------------
Q psy15549 82 KAV-------NVVRFSPNGELLASGDD-----V--GKEIWYLTERESGIANV---------------------------- 119 (621)
Q Consensus 82 ~~V-------~~l~~spdg~~las~~d-----~--~v~iw~~~~~~~~~~~~---------------------------- 119 (621)
..+ .+++|||||+++++++. . .+.+|++..+.......
T Consensus 100 ~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~ 179 (1045)
T 1k32_A 100 GKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGY 179 (1045)
T ss_dssp EEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTC
T ss_pred CcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccc
Confidence 888 99999999997777663 2 25556554432100000
Q ss_pred --------------eecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeee
Q psy15549 120 --------------EFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVT 185 (621)
Q Consensus 120 --------------~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (621)
.....+.+|...+.++.|+++ .++++++.|+.++||.+...... .
T Consensus 180 ~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~--------------------~ 238 (1045)
T 1k32_A 180 RGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKD--------------------L 238 (1045)
T ss_dssp CSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCS--------------------C
T ss_pred cCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCc--------------------c
Confidence 011233567888999999988 66677788899999987642211 1
Q ss_pred eeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc-----------CCcceEEEEEc-CCCCEEEEEe
Q psy15549 186 KILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE-----------HKKFVQGVAWD-PKNQYVATLS 253 (621)
Q Consensus 186 ~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-----------~~~~v~~l~~s-p~~~~l~s~~ 253 (621)
..+..|. .+..++|+|||++|+++. ++.|++||+... .+..+.. |...+.+++|+ |+|++|++++
T Consensus 239 ~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~ 315 (1045)
T 1k32_A 239 RKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS 315 (1045)
T ss_dssp EECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE
T ss_pred eEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCCEEEEEE
Confidence 3334444 466779999999998885 899999999544 3445544 33468999999 9999999887
Q ss_pred CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCccc-ceeeeeecCCCCeEEeccccccCCCCCCc-ce
Q psy15549 254 SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKS-FFRRLTFSPDGQLLIAPSGCLENSDSTRK-PI 331 (621)
Q Consensus 254 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~spdg~~l~~~s~~~~~~d~~i~-~~ 331 (621)
++.|.+|++.++.... +. .+.. .+..++|+ ||+.|++++ .+..+. +|
T Consensus 316 -~~~i~~~~~~~~~~~~-~~-----------------------~~~~~~~~~~~~s-dg~~l~~~s-----~~~~l~~~~ 364 (1045)
T 1k32_A 316 -RGQAFIQDVSGTYVLK-VP-----------------------EPLRIRYVRRGGD-TKVAFIHGT-----REGDFLGIY 364 (1045)
T ss_dssp -TTEEEEECTTSSBEEE-CS-----------------------CCSCEEEEEECSS-SEEEEEEEE-----TTEEEEEEE
T ss_pred -cCEEEEEcCCCCceEE-cc-----------------------CCCcceEEeeeEc-CCCeEEEEE-----CCCceEEEE
Confidence 8899999998766433 21 1122 56889999 999999887 333333 33
Q ss_pred eeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEeccc
Q psy15549 332 SVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIH 411 (621)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h 411 (621)
+... .....+..+...+..+.|+| +++.|++++.++.|++||+.+++..... .+|
T Consensus 365 d~~~--------~~~~~l~~~~~~~~~~~~Sp----------------DG~~la~~~~~~~v~~~d~~tg~~~~~~-~~~ 419 (1045)
T 1k32_A 365 DYRT--------GKAEKFEENLGNVFAMGVDR----------------NGKFAVVANDRFEIMTVDLETGKPTVIE-RSR 419 (1045)
T ss_dssp ETTT--------CCEEECCCCCCSEEEEEECT----------------TSSEEEEEETTSEEEEEETTTCCEEEEE-ECS
T ss_pred ECCC--------CCceEecCCccceeeeEECC----------------CCCEEEEECCCCeEEEEECCCCceEEec-cCC
Confidence 4321 12223335556667777776 7899999999999999999999877665 358
Q ss_pred ccceEEEEEcCCCCeEEEEeCCC----------cEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHh
Q psy15549 412 YTKLTDITWSSDGKVLIASSTDG----------YCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQA 481 (621)
Q Consensus 412 ~~~v~~~~~spdg~~l~s~s~dg----------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w 481 (621)
...+.+++|||||++|++++.++ .|++||+.+++ ...+..+......+.|+++|+.++..+.++....|
T Consensus 420 ~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~ 498 (1045)
T 1k32_A 420 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSP 498 (1045)
T ss_dssp SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEE
T ss_pred CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCc
Confidence 88999999999999999887654 89999999887 55666666667778899999988877766665555
Q ss_pred c
Q psy15549 482 K 482 (621)
Q Consensus 482 ~ 482 (621)
.
T Consensus 499 ~ 499 (1045)
T 1k32_A 499 D 499 (1045)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-26 Score=253.00 Aligned_cols=329 Identities=11% Similarity=0.138 Sum_probs=234.4
Q ss_pred CCCeEEEeccccccCCcceEEEEecC-Cc-----eEEeeeccCccccccceeEEeccccccccceeecccccccc-----
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGA-DS-----HVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ----- 81 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~-dg-----~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~----- 81 (621)
...|.+++|||||+ +|++++. |+ .|. +||+.+++.... +..+.
T Consensus 36 ~~~~~~~~~SpdG~-----~la~~~~~d~~~~~~~i~--------------~~d~~~g~~~~~-------~~~~~~~~~~ 89 (741)
T 2ecf_A 36 GPTLMKPKVAPDGS-----RVTFLRGKDSDRNQLDLW--------------SYDIGSGQTRLL-------VDSKVVLPGT 89 (741)
T ss_dssp CCCCEEEEECTTSS-----EEEEEECCSSCTTEEEEE--------------EEETTTCCEEEE-------ECGGGTC---
T ss_pred CCCCCCceEecCCC-----EEEEEeccCCCCcccEEE--------------EEECCCCceeEc-------cchhhccccc
Confidence 44799999999999 9999988 88 787 777766543221 11221
Q ss_pred -------------------CcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCC
Q psy15549 82 -------------------KAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 142 (621)
Q Consensus 82 -------------------~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~ 142 (621)
..|.+++|||||++|++++++.|.+|++..+.. .....+..|...+..++|+|||+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~-----~~~~~l~~~~~~~~~~~~SPDG~ 164 (741)
T 2ecf_A 90 ETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLGGELYLYDLKQEGK-----AAVRQLTHGEGFATDAKLSPKGG 164 (741)
T ss_dssp -----------------CCEESCCCEECTTSSEEEEEETTEEEEEESSSCST-----TSCCBCCCSSSCEEEEEECTTSS
T ss_pred ccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeCCcEEEEECCCCCc-----ceEEEcccCCcccccccCCCCCC
Confidence 348899999999999999999999999986510 03445667888899999999999
Q ss_pred EEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCC----------------CeEEEEECCCCCE
Q psy15549 143 LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLE----------------DVYDISWSPTSTH 206 (621)
Q Consensus 143 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~v~~i~~spd~~~ 206 (621)
+|++++. +.|++||+.+++.... ...+.. .+.+++|+|||++
T Consensus 165 ~la~~~~-~~i~~~d~~~g~~~~~---------------------~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~ 222 (741)
T 2ecf_A 165 FVSFIRG-RNLWVIDLASGRQMQL---------------------TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA 222 (741)
T ss_dssp EEEEEET-TEEEEEETTTTEEEEC---------------------CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC
T ss_pred EEEEEeC-CcEEEEecCCCCEEEe---------------------ccCCccceeccccceeeeeccccccceEECCCCCE
Confidence 9999884 6899999988754211 111211 2478999999999
Q ss_pred EEEEeCCC---------------------------------eEEEEECCC-CcEEEEec--cCCcceEEEEEcCCCCEEE
Q psy15549 207 LISGSVDN---------------------------------TAIMWDVHK-GKNLGILT--EHKKFVQGVAWDPKNQYVA 250 (621)
Q Consensus 207 l~s~~~dg---------------------------------~i~vwd~~~-~~~~~~~~--~~~~~v~~l~~sp~~~~l~ 250 (621)
|++++.|+ .|++||+.+ ++...... .|...+..++| |||++|+
T Consensus 223 l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~ 301 (741)
T 2ecf_A 223 IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLS 301 (741)
T ss_dssp EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEE
T ss_pred EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEE
Confidence 99988765 889999988 87655443 47788999999 9999999
Q ss_pred EEeC-----CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCC
Q psy15549 251 TLSS-----DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSD 325 (621)
Q Consensus 251 s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d 325 (621)
+++. +..|++||+.+++....+..+... .-..+..++|+|||++++++. .+
T Consensus 302 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~-------------------~~~~~~~~~~spdg~~~~~~~-----~~ 357 (741)
T 2ecf_A 302 FQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT-------------------WVPLHNSLRFLDDGSILWSSE-----RT 357 (741)
T ss_dssp EEEEETTSSEEEEEEEETTTCCEEEEEEEECSS-------------------CCCCCSCCEECTTSCEEEEEC-----TT
T ss_pred EEEecccCCeEEEEEEECCCCceEEEEEcCCCC-------------------cCCcCCceEECCCCeEEEEec-----CC
Confidence 7764 567999999988766554321100 000235789999999777776 77
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeee-eccceeeecCCCCCCCCccCCCcEEEEEEc-CC--cEEEEeCCC-
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAV-KCCPVLFELKPSDDKPLFKLPYRIVIAVAT-EN--NILLYDTQH- 400 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~- 400 (621)
+..++|.+... .. ...+..+...+..+ .|+| +++.+++.+. ++ .++||++..
T Consensus 358 g~~~l~~~~~~------~~-~~~l~~~~~~v~~~~~~s~----------------dg~~l~~~~~~~~~~~~~l~~~~~~ 414 (741)
T 2ecf_A 358 GFQHLYRIDSK------GK-AAALTHGNWSVDELLAVDE----------------KAGLAYFRAGIESARESQIYAVPLQ 414 (741)
T ss_dssp SSCEEEEECSS------SC-EEESCCSSSCEEEEEEEET----------------TTTEEEEEECSSCTTCBEEEEEETT
T ss_pred CccEEEEEcCC------CC-eeeeeecceEEEeEeEEeC----------------CCCEEEEEEeCCCCceEEEEEEEcC
Confidence 88888865411 11 33444444445444 3555 6677765554 44 899999865
Q ss_pred CceeEEEecccccceEEEEEcCCCCeEEEEeCC----CcEEEEEecCC
Q psy15549 401 ASPFAFIANIHYTKLTDITWSSDGKVLIASSTD----GYCSIISFGDN 444 (621)
Q Consensus 401 ~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~d----g~i~iw~~~~~ 444 (621)
+.....+. ....+.+++|||||++|+....+ +.+.+|+...+
T Consensus 415 g~~~~~l~--~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 415 GGQPQRLS--KAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp CCCCEECC--CSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred CCCeeecc--cCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 55455553 25678899999999988876443 46888887644
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-26 Score=250.90 Aligned_cols=323 Identities=11% Similarity=0.067 Sum_probs=220.2
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccC---cEEEEEEc
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK---AVNVVRFS 90 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~---~V~~l~~s 90 (621)
..+.+++|+|||+ ++++ +.||.|+ +||+.+++.... +..|.. .|.+++||
T Consensus 17 ~~~~~~~~spdg~-----~~~~-~~dg~i~--------------~~d~~~g~~~~~-------~~~~~~~~~~v~~~~~S 69 (723)
T 1xfd_A 17 IHDPEAKWISDTE-----FIYR-EQKGTVR--------------LWNVETNTSTVL-------IEGKKIESLRAIRYEIS 69 (723)
T ss_dssp CCCCCCCBSSSSC-----BCCC-CSSSCEE--------------EBCGGGCCCEEE-------ECTTTTTTTTCSEEEEC
T ss_pred ccccccEEcCCCc-----EEEE-eCCCCEE--------------EEECCCCcEEEE-------eccccccccccceEEEC
Confidence 3578999999997 7766 7899999 888887755332 444544 49999999
Q ss_pred cCCCEEEEEcC----------CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 91 PNGELLASGDD----------VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 91 pdg~~las~~d----------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
|||++|+++++ +.+.+|++..+.. ..+....+|...+..++|||||++||+++. +.|++||+.+
T Consensus 70 pDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~ 143 (723)
T 1xfd_A 70 PDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-----QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG 143 (723)
T ss_dssp TTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-----EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS
T ss_pred CCCCEEEEEecCccceeecceeeEEEEECCCCce-----EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC
Confidence 99999999863 5678999987632 223334456666889999999999999886 7899999988
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCC------------------CeEEEEECCCCCEEEEEeCCC--------
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLE------------------DVYDISWSPTSTHLISGSVDN-------- 214 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~i~~spd~~~l~s~~~dg-------- 214 (621)
++.. .....+.. .+.+++|+|||++|++++.++
T Consensus 144 g~~~---------------------~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~ 202 (723)
T 1xfd_A 144 KQAI---------------------RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMEL 202 (723)
T ss_dssp SCCE---------------------EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred CceE---------------------EEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEe
Confidence 7643 22222222 347899999999999987543
Q ss_pred --------------------------eEEEEECCCCcEEEEeccC------CcceEEEEEcCCCCEEEEEeCC----CcE
Q psy15549 215 --------------------------TAIMWDVHKGKNLGILTEH------KKFVQGVAWDPKNQYVATLSSD----RSL 258 (621)
Q Consensus 215 --------------------------~i~vwd~~~~~~~~~~~~~------~~~v~~l~~sp~~~~l~s~~~d----g~i 258 (621)
.|++||+.+++....+..+ ...+..++|+|||++|++.+.. ..|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 282 (723)
T 1xfd_A 203 PTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSIL 282 (723)
T ss_dssp CCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEE
T ss_pred eccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEE
Confidence 7999999988865666544 6678999999999988776543 579
Q ss_pred EEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeee
Q psy15549 259 RTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFT 338 (621)
Q Consensus 259 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~ 338 (621)
++||+.+++....+....... .......++|+|||+.|+..+.. .++..
T Consensus 283 ~~~d~~~g~~~~~~~~~~~~~------------------~~~~~~~~~~spdg~~l~~~~~~---~~~~~---------- 331 (723)
T 1xfd_A 283 TLCDATTGVCTKKHEDESEAW------------------LHRQNEEPVFSKDGRKFFFIRAI---PQGGR---------- 331 (723)
T ss_dssp EEEETTTCCEEEEEEEECSSC------------------CCCCCCCCEECTTSCSEEEEEEE---CCSSS----------
T ss_pred EEEeCCCCcceEEEEeccCCE------------------EeccCCCceEcCCCCeEEEEEec---ccCCC----------
Confidence 999999887655432110000 00001368999999988765210 01000
Q ss_pred ecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEe-CCCCce--eEEEecccccce
Q psy15549 339 RACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYD-TQHASP--FAFIANIHYTKL 415 (621)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd-~~~~~~--~~~~~~~h~~~v 415 (621)
.....|++|| ..++.. ...+.. +...+
T Consensus 332 -------------------------------------------------~~~~~l~~~d~~~~~~~~~~~~l~~-~~~~~ 361 (723)
T 1xfd_A 332 -------------------------------------------------GKFYHITVSSSQPNSSNDNIQSITS-GDWDV 361 (723)
T ss_dssp -------------------------------------------------SCEEEEEEECSSCCSSSCCCCBSCC-SSSCE
T ss_pred -------------------------------------------------cceeEEEEEeccCCCCccceeEeec-CCeEE
Confidence 0012567777 344431 344432 23344
Q ss_pred EE-EEEcCCCCeEEEEeCC---CcEEEEEecCCc--CCcccCC---CCCcccccCCCCCCCCccc
Q psy15549 416 TD-ITWSSDGKVLIASSTD---GYCSIISFGDNE--IGIPYVP---PSGEESKENDPTKGEPVRS 471 (621)
Q Consensus 416 ~~-~~~spdg~~l~s~s~d---g~i~iw~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~s 471 (621)
.. ++|+|||+.|+..+.+ +.++||++.... ....+.. +...+..+.++++|+.++.
T Consensus 362 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 362 TKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp EEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred EeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEE
Confidence 44 6999999999876655 889999997532 2333433 3455667889999986653
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=238.64 Aligned_cols=336 Identities=9% Similarity=0.035 Sum_probs=241.6
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc--cCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ--KTDQDL 164 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~--~~~~~~ 164 (621)
+|+|++.++++++ ++.|.+||...+ +.+..+..+.. +..++|+|+|++|++++.|+.|++||+ .+++.+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~-------~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSK-------KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTC-------CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCc-------eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE
Confidence 3889998888887 888999998876 45555553323 889999999999999999999999999 555432
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC----CCCEEEEEeC-CCeEEEEECCCCcEEEEeccC------
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP----TSTHLISGSV-DNTAIMWDVHKGKNLGILTEH------ 233 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp----d~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~------ 233 (621)
..+. +...+..++|+| ||++|++++. +++|.+||..+++++..+..+
T Consensus 216 ---------------------~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~ 273 (543)
T 1nir_A 216 ---------------------AEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDT 273 (543)
T ss_dssp ---------------------EEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSS
T ss_pred ---------------------EEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCc
Confidence 3333 455689999999 9999999885 899999999999998887542
Q ss_pred -----CcceEEEEEcCCCCE-EEEEeCCCcEEEEEccCceeee--ecccCCCCCCCccccccccccccccCCcccceeee
Q psy15549 234 -----KKFVQGVAWDPKNQY-VATLSSDRSLRTYSIQSKKVIS--RACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL 305 (621)
Q Consensus 234 -----~~~v~~l~~sp~~~~-l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 305 (621)
...+.++.++|++.. +++...++.|.+||+.+.+.+. .+. ....+.++
T Consensus 274 ~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~------------------------~~~~~~~~ 329 (543)
T 1nir_A 274 QTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG------------------------AAPFLHDG 329 (543)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE------------------------CCSSCCCE
T ss_pred cccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec------------------------cCcCccCc
Confidence 226889999998765 5566678999999998765433 111 12345789
Q ss_pred eecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEE
Q psy15549 306 TFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVI 385 (621)
Q Consensus 306 ~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 385 (621)
+|+|+|+++++++. .++++.+|+............. . ..|...... ++.++++.++
T Consensus 330 ~~spdg~~l~va~~----~~~~v~v~D~~tg~l~~~i~~g--~-~ph~g~g~~-----------------~~~p~~g~~~ 385 (543)
T 1nir_A 330 GWDSSHRYFMTAAN----NSNKVAVIDSKDRRLSALVDVG--K-TPHPGRGAN-----------------FVHPKYGPVW 385 (543)
T ss_dssp EECTTSCEEEEEEG----GGTEEEEEETTTTEEEEEEECS--S-SBCCTTCEE-----------------EEETTTEEEE
T ss_pred eECCCCCEEEEEec----CCCeEEEEECCCCeEEEeeccC--C-CCCCCCCcc-----------------cCCCCCccEE
Confidence 99999998876653 5788999987532211110000 0 001111111 1122445555
Q ss_pred EEE--cCCcEEEEeCCC-------CceeEEEecccccceEEEEEcCCCCeEEEEe-------CCCcEEEEEecCCcCC-c
Q psy15549 386 AVA--TENNILLYDTQH-------ASPFAFIANIHYTKLTDITWSSDGKVLIASS-------TDGYCSIISFGDNEIG-I 448 (621)
Q Consensus 386 ~~~--~dg~i~iwd~~~-------~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s-------~dg~i~iw~~~~~~~~-~ 448 (621)
+.+ .+++|.+||+.+ .+.+..+. +|...+..++|+|||++|++++ .+++|.+||+.+++.. .
T Consensus 386 ~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~-~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~ 464 (543)
T 1nir_A 386 STSHLGDGSISLIGTDPKNHPQYAWKKVAELQ-GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQ 464 (543)
T ss_dssp EEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE-CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCE
T ss_pred EeccCCCceEEEEEeCCCCCchhcCeEEEEEE-cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeE
Confidence 554 479999999998 78888885 5878889999999999999987 2789999999999877 3
Q ss_pred cc--------CCCCCcccccCCCCCCCCcccC-----CCcccHHHhccc-CccccccccCCCCCCCcc
Q psy15549 449 PY--------VPPSGEESKENDPTKGEPVRSE-----DKPRSAEQAKGE-GKVLGEKQTGNKVSPTDK 502 (621)
Q Consensus 449 ~~--------~~~~~~~~~~~~~~~~~~~~s~-----~~~~~~~~w~~~-~~~~~~~~~~~~~s~~~~ 502 (621)
.+ ..+...+....|+++|+.+..+ +.++.|.+|+.. ++.+..++......|+++
T Consensus 465 ~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~~~~p~g~ 532 (543)
T 1nir_A 465 VLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTGK 532 (543)
T ss_dssp EECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTTCCSEEEE
T ss_pred EeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCCccCCCee
Confidence 32 3445567788999999977744 357899999944 555555554445556553
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-25 Score=249.89 Aligned_cols=329 Identities=12% Similarity=0.086 Sum_probs=231.3
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccccc---ceeeccccccccCcEEEEEEc-
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIA---NVEFASDLSRHQKAVNVVRFS- 90 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~---~~~~~~~~~~h~~~V~~l~~s- 90 (621)
.+.+++|+|||+ +|+++ .++.|. +|++........ ..........|...+.+++||
T Consensus 246 ~~~~~~~SpDG~-----~la~~-~~~~i~--------------~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~ 305 (1045)
T 1k32_A 246 DYYPRHLNTDGR-----RILFS-KGGSIY--------------IFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSP 305 (1045)
T ss_dssp SSCEEEEEESSS-----CEEEE-ETTEEE--------------EECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEE
T ss_pred CcceeeEcCCCC-----EEEEE-eCCEEE--------------EecCCceEeeeeccCcccccccccccccccceeeecC
Confidence 577889999998 88887 488888 555421110000 000000122356679999999
Q ss_pred cCCCEEEEEcCCceEEEEeccCccccccceecccccccCC-CeEEEEECCCCCEEEEEeCCCcEE-EEEccCCCCCCCCC
Q psy15549 91 PNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQK-AVNVVRFSPNGELLASGDDESTII-VWKQKTDQDLPEFP 168 (621)
Q Consensus 91 pdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-~V~~i~~sp~g~~l~s~s~dg~i~-vwd~~~~~~~~~~~ 168 (621)
|||++|++++++.+.+|+...+. ...+..|.. .+..++|+ +|+.|++++.++.+. +|++.++..
T Consensus 306 pdG~~la~~~~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~----- 371 (1045)
T 1k32_A 306 LDGDLIAFVSRGQAFIQDVSGTY--------VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA----- 371 (1045)
T ss_dssp CGGGCEEEEETTEEEEECTTSSB--------EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE-----
T ss_pred CCCCEEEEEEcCEEEEEcCCCCc--------eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc-----
Confidence 99999999998889999887642 223556777 89999999 999999999888888 889877652
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCE
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQY 248 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~ 248 (621)
..+.+|...+..++|+|||++|++++.++.|++||+.+++....+..|...+.+++|+|||++
T Consensus 372 -----------------~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~ 434 (1045)
T 1k32_A 372 -----------------EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRF 434 (1045)
T ss_dssp -----------------EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCE
T ss_pred -----------------eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCe
Confidence 233478888999999999999999999999999999999988877789899999999999999
Q ss_pred EEEEeCCC----------cEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 249 VATLSSDR----------SLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 249 l~s~~~dg----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
|++++.++ .|++||+.+++ ...+.. +...+..++|+|||++|++++
T Consensus 435 la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~-----------------------~~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 435 IAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT-----------------------ENSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp EEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC-----------------------SSSBEEEEEECTTSCEEEEEE
T ss_pred EEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC-----------------------CCcccCCceEcCCCCEEEEEe
Confidence 99887654 89999998877 333321 223356799999999999887
Q ss_pred ccccCCCCCCcceeeeeeeee------------c-ccCC-----------------------CceecCCcccceeeeecc
Q psy15549 319 GCLENSDSTRKPISVTHVFTR------------A-CLNK-----------------------PAVCLPSLQYYSVAVKCC 362 (621)
Q Consensus 319 ~~~~~~d~~i~~~~~~~~~~~------------~-~~~~-----------------------~~~~~~~~~~~~~~~~~~ 362 (621)
.++....|+....... . .... ....+..+...+..+.
T Consensus 491 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~-- 563 (1045)
T 1k32_A 491 -----YRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMII-- 563 (1045)
T ss_dssp -----SCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEE--
T ss_pred -----cccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheE--
Confidence 5555555543211000 0 0000 0001111112222222
Q ss_pred ceeeecCCCCCCCCccCCCcEEEE-------------EEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEE
Q psy15549 363 PVLFELKPSDDKPLFKLPYRIVIA-------------VATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIA 429 (621)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~l~~-------------~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s 429 (621)
+++++..+++ ......|++||+.+++..... ..+.+++|||||++|++
T Consensus 564 --------------~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-----~~v~~~~~S~DG~~l~~ 624 (1045)
T 1k32_A 564 --------------PLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK-----NNLTDLRLSADRKTVMV 624 (1045)
T ss_dssp --------------ECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE-----EEEEEEEECTTSCEEEE
T ss_pred --------------EcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEee-----cCcceEEECCCCCEEEE
Confidence 2335555554 112457899999888753322 46889999999999999
Q ss_pred EeCCCcEEEEEecCCc
Q psy15549 430 SSTDGYCSIISFGDNE 445 (621)
Q Consensus 430 ~s~dg~i~iw~~~~~~ 445 (621)
++.+ .|++|++.+++
T Consensus 625 ~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 625 RKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp EETT-SCEEEEESSCT
T ss_pred EcCC-cEEEEeCccCc
Confidence 9866 89999998876
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-24 Score=218.00 Aligned_cols=227 Identities=15% Similarity=0.152 Sum_probs=172.9
Q ss_pred eecCCCCeEEEecccc--------------ccCCcceEEEEecCC------ceEEeeeccCccccccceeEEeccccccc
Q psy15549 9 SWHNRDPVLSVDIQLK--------------QEKDNCYRIVTGGAD------SHVFDYLLKIPHRLKTGKIWYLTERESGI 68 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd--------------~~~~~~~~l~tg~~d------g~v~~~d~~~~~~~~~~~iw~~~~~~~~~ 68 (621)
...|...+.++++++. +. +++.++.+ +.|+ +||+.... .
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~-----~l~~~s~~~~~~~~~~i~--------------i~d~~g~~-~- 171 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRT-----RIAYVVQTNGGQFPYELR--------------VSDYDGYN-Q- 171 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTC-----EEEEEEECSSSSCCEEEE--------------EEETTSCS-C-
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCC-----EEEEEEecCCCCccceEE--------------EEcCCCCC-C-
Confidence 3456667777777751 33 56655543 6788 99986432 2
Q ss_pred cceeeccccccccCcEEEEEEccCCCEEEEEc-CC---ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEE
Q psy15549 69 ANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DV---GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL 144 (621)
Q Consensus 69 ~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~---~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l 144 (621)
..+.+|...|.+++|+|||++|++++ ++ .|++|++..+. . ..+..|...+.+++|+|+|++|
T Consensus 172 ------~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~-------~-~~l~~~~~~~~~~~~spdg~~l 237 (415)
T 2hqs_A 172 ------FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-------V-RQVASFPRHNGAPAFSPDGSKL 237 (415)
T ss_dssp ------EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-------E-EEEECCSSCEEEEEECTTSSEE
T ss_pred ------EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc-------E-EEeecCCCcccCEEEcCCCCEE
Confidence 23678999999999999999999987 43 79999998762 2 2456678899999999999988
Q ss_pred E-EEeCCCc--EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CC--eEEE
Q psy15549 145 A-SGDDEST--IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DN--TAIM 218 (621)
Q Consensus 145 ~-s~s~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg--~i~v 218 (621)
+ +++.++. |++||+.+++. ..+..|...+.+++|+|||++|++++. ++ .|++
T Consensus 238 a~~~~~~g~~~i~~~d~~~~~~----------------------~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 238 AFALSKTGSLNLYVMDLASGQI----------------------RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp EEEECTTSSCEEEEEETTTCCE----------------------EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEEEecCCCceEEEEECCCCCE----------------------EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 8 6666654 99999988753 455678889999999999999998886 44 6888
Q ss_pred EECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCC---CcEEEEEccCceeeeecccCCCCCCCcccccccccccccc
Q psy15549 219 WDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSD---RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHD 295 (621)
Q Consensus 219 wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (621)
||+.+++. ..+..+...+.+++|+|+|++|++++.+ ..|++||+.+++... +..+
T Consensus 296 ~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~-------------------- 353 (415)
T 2hqs_A 296 VNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSST-------------------- 353 (415)
T ss_dssp EETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCS--------------------
T ss_pred EECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCC--------------------
Confidence 89988764 4555677789999999999999988764 589999998876532 2111
Q ss_pred CCcccceeeeeecCCCCeEEecc
Q psy15549 296 DTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 296 ~~~~~~i~~~~~spdg~~l~~~s 318 (621)
..+.+++|+|||++|++++
T Consensus 354 ----~~~~~~~~spdg~~l~~~s 372 (415)
T 2hqs_A 354 ----FLDETPSLAPNGTMVIYSS 372 (415)
T ss_dssp ----SSCEEEEECTTSSEEEEEE
T ss_pred ----CCcCCeEEcCCCCEEEEEE
Confidence 1457899999999888765
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-25 Score=240.24 Aligned_cols=329 Identities=10% Similarity=0.066 Sum_probs=224.1
Q ss_pred cCcEEEEEEccCCCEEEEEc--CC-----ceEEEEeccCccccccceecccccccC------------------------
Q psy15549 81 QKAVNVVRFSPNGELLASGD--DV-----GKEIWYLTERESGIANVEFASDLSRHQ------------------------ 129 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~--d~-----~v~iw~~~~~~~~~~~~~~~~~~~~h~------------------------ 129 (621)
...|.+++|||||++|++++ ++ .|.+|++..+. ....+..+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQ-------TRLLVDSKVVLPGTETLSDEEKARRERQRIAAM 108 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCC-------EEEEECGGGTC--------------------CC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCc-------eeEccchhhcccccccccchhhhhhhhhhhccc
Confidence 45799999999999999887 45 68999988763 222222222
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC--CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEE
Q psy15549 130 KAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ--DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL 207 (621)
Q Consensus 130 ~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l 207 (621)
..|.+++|+|||++|++++. +.|++||+.++. .. ..+..|...+.+++|+|||++|
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~---------------------~~l~~~~~~~~~~~~SPDG~~l 166 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAV---------------------RQLTHGEGFATDAKLSPKGGFV 166 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSC---------------------CBCCCSSSCEEEEEECTTSSEE
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceE---------------------EEcccCCcccccccCCCCCCEE
Confidence 33789999999999999886 899999998872 22 3345677889999999999999
Q ss_pred EEEeCCCeEEEEECCCCcEEEEeccCCcc----------------eEEEEEcCCCCEEEEEeCCC---------------
Q psy15549 208 ISGSVDNTAIMWDVHKGKNLGILTEHKKF----------------VQGVAWDPKNQYVATLSSDR--------------- 256 (621)
Q Consensus 208 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~----------------v~~l~~sp~~~~l~s~~~dg--------------- 256 (621)
++++ ++.|++||+.+++.......+... +.+++|+|||++|++++.|+
T Consensus 167 a~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~ 245 (741)
T 2ecf_A 167 SFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADR 245 (741)
T ss_dssp EEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSC
T ss_pred EEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCc
Confidence 9988 569999999988776555444332 47899999999999988765
Q ss_pred ------------------cEEEEEccC-ceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 257 ------------------SLRTYSIQS-KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 257 ------------------~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
.|.+||+.+ ++...... ...+...+.+++| |||++|+++
T Consensus 246 ~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~---------------------~~~~~~~~~~~~~-pDg~~l~~~ 303 (741)
T 2ecf_A 246 TDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDL---------------------GKEQDIYLARVNW-RDPQHLSFQ 303 (741)
T ss_dssp EEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECC---------------------CSCSSEEEEEEEE-EETTEEEEE
T ss_pred ccceEeecCCCCCCCCeeEEEEEECCCCCceEEecC---------------------CCCcceEEEEEEe-CCCCEEEEE
Confidence 778888877 65433221 0123456789999 999999977
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcc-c---ceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcE
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQ-Y---YSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNI 393 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 393 (621)
+......+..+.+|+...... ...+..+. . .+.. ..|+++++++++++.++.+
T Consensus 304 ~~~~~~~~~~i~~~d~~~g~~-------~~~~~~~~~~~~~~~~~----------------~~~spdg~~~~~~~~~g~~ 360 (741)
T 2ecf_A 304 RQSRDQKKLDLVEVTLASNQQ-------RVLAHETSPTWVPLHNS----------------LRFLDDGSILWSSERTGFQ 360 (741)
T ss_dssp EEETTSSEEEEEEEETTTCCE-------EEEEEEECSSCCCCCSC----------------CEECTTSCEEEEECTTSSC
T ss_pred EecccCCeEEEEEEECCCCce-------EEEEEcCCCCcCCcCCc----------------eEECCCCeEEEEecCCCcc
Confidence 631111345566666432110 00000000 0 1112 3344577877777788877
Q ss_pred EEEeCC-CCceeEEEecccccceEEE-EEcCCCCeEEEE-eCCC--cEEEEEecC-CcCCcccCCCCCcccccCCCCCCC
Q psy15549 394 LLYDTQ-HASPFAFIANIHYTKLTDI-TWSSDGKVLIAS-STDG--YCSIISFGD-NEIGIPYVPPSGEESKENDPTKGE 467 (621)
Q Consensus 394 ~iwd~~-~~~~~~~~~~~h~~~v~~~-~~spdg~~l~s~-s~dg--~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 467 (621)
.||.+. .+. ...+ ..|...|..+ .|+|||+.|+.. +.++ .++||++.. +.....+.. ...+..+.|+++|+
T Consensus 361 ~l~~~~~~~~-~~~l-~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~ 437 (741)
T 2ecf_A 361 HLYRIDSKGK-AAAL-THGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNAS 437 (741)
T ss_dssp EEEEECSSSC-EEES-CCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSS
T ss_pred EEEEEcCCCC-eeee-eecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCC
Confidence 777654 334 5555 4567778887 599999987654 4555 899999974 555566655 44456788999999
Q ss_pred CcccC----CCcccHHHhcccCcc
Q psy15549 468 PVRSE----DKPRSAEQAKGEGKV 487 (621)
Q Consensus 468 ~~~s~----~~~~~~~~w~~~~~~ 487 (621)
.++.. ..+..+.+++..++.
T Consensus 438 ~l~~~~~~~~~p~~~~l~~~~~~~ 461 (741)
T 2ecf_A 438 VYVDSWSNNSTPPQIELFRANGEK 461 (741)
T ss_dssp EEEEEEEETTEEEEEEEEETTSCE
T ss_pred EEEEEecCCCCCCeEEEEEcCCCe
Confidence 76644 234566777665543
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.7e-24 Score=231.16 Aligned_cols=299 Identities=13% Similarity=0.138 Sum_probs=204.3
Q ss_pred CcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC-
Q psy15549 82 KAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT- 160 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~- 160 (621)
..|.+++|||| +.++.+.++.+.+|++..+ . ...+..+...+.+++|+|||++|+++ .++.|++|++.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~-------~-~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~ 151 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQGGLVGFDMLAR-------K-VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKL 151 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETTEEEEEETTTT-------E-EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCT
T ss_pred cCceeEEECCC-CeEEEEECCEEEEEECCCC-------c-eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcc
Confidence 56999999999 7777778899999999765 2 22344566778899999999999995 679999999988
Q ss_pred ----CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-------------------------
Q psy15549 161 ----DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS------------------------- 211 (621)
Q Consensus 161 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~------------------------- 211 (621)
++............ .+.. .....+...+.++.|+|||++|++++
T Consensus 152 ~~~~g~~~~~~~~~~~~~------~~g~-~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 224 (706)
T 2z3z_A 152 GEGMSRAIAVTIDGTETL------VYGQ-AVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLY 224 (706)
T ss_dssp TSCCCCCEESCSCCBTTE------EESS-CCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEEC
T ss_pred cccCCCcEEeccCCCCCe------Eccc-chhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEee
Confidence 65432111000000 0000 00111223358899999999999987
Q ss_pred --------CCCeEEEEECCCCcEEEEec--cCCcceEEEEEcCCCCEEEEEeCCC-----cEEEEEccCceeeeecccCC
Q psy15549 212 --------VDNTAIMWDVHKGKNLGILT--EHKKFVQGVAWDPKNQYVATLSSDR-----SLRTYSIQSKKVISRACRSK 276 (621)
Q Consensus 212 --------~dg~i~vwd~~~~~~~~~~~--~~~~~v~~l~~sp~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~ 276 (621)
.+..|++||+.+++...... .|...+.+++|+|||++|++++.++ .|.+||+.+++....+....
T Consensus 225 y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~ 304 (706)
T 2z3z_A 225 YPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVET 304 (706)
T ss_dssp CCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEE
T ss_pred CCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEcc
Confidence 44689999999887654442 4667899999999999999888775 89999999883333321100
Q ss_pred CCCCCccccccccccccccCCcccceeeeeecC--CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCccc
Q psy15549 277 LPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP--DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQY 354 (621)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp--dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (621)
. ......+.+++|+| ||++++++. .++.+++|.+... ......+..+..
T Consensus 305 ~------------------~~~~~~~~~~~~sp~~dg~~l~~~~-----~~g~~~l~~~~~~------~~~~~~l~~~~~ 355 (706)
T 2z3z_A 305 D------------------KHYVEPLHPLTFLPGSNNQFIWQSR-----RDGWNHLYLYDTT------GRLIRQVTKGEW 355 (706)
T ss_dssp C------------------SSCCCCCSCCEECTTCSSEEEEEEC-----TTSSCEEEEEETT------SCEEEECCCSSS
T ss_pred C------------------CCeECccCCceeecCCCCEEEEEEc-----cCCccEEEEEECC------CCEEEecCCCCe
Confidence 0 00011235789999 999888877 7888888876510 112223344444
Q ss_pred ceee-eeccceeeecCCCCCCCCccCCCcEEEEEEcC-C----cEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEE
Q psy15549 355 YSVA-VKCCPVLFELKPSDDKPLFKLPYRIVIAVATE-N----NILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLI 428 (621)
Q Consensus 355 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-g----~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~ 428 (621)
.+.. +.|+| +++.|+.++.+ + .|+.||..+++ ...+ .|...+.+++|||||++|+
T Consensus 356 ~v~~~~~~sp----------------dg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l--~~~~~~~~~~~spdg~~l~ 416 (706)
T 2z3z_A 356 EVTNFAGFDP----------------KGTRLYFESTEASPLERHFYCIDIKGGK-TKDL--TPESGMHRTQLSPDGSAII 416 (706)
T ss_dssp CEEEEEEECT----------------TSSEEEEEESSSCTTCBEEEEEETTCCC-CEES--CCSSSEEEEEECTTSSEEE
T ss_pred EEEeeeEEcC----------------CCCEEEEEecCCCCceEEEEEEEcCCCC-ceec--cCCCceEEEEECCCCCEEE
Confidence 4443 46665 66777666654 3 67778887765 3333 2667799999999999888
Q ss_pred EEeCC----CcEEEEEecCCc
Q psy15549 429 ASSTD----GYCSIISFGDNE 445 (621)
Q Consensus 429 s~s~d----g~i~iw~~~~~~ 445 (621)
.++.+ +.|++|++.+++
T Consensus 417 ~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 417 DIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEECSSCSCEEEEEESSSCE
T ss_pred EEecCCCCCcEEEEEECCCCe
Confidence 76543 569999998876
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-23 Score=206.65 Aligned_cols=280 Identities=8% Similarity=0.054 Sum_probs=193.0
Q ss_pred EeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEE
Q psy15549 19 VDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS 98 (621)
Q Consensus 19 l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las 98 (621)
..|.+++. ..+++++.++.|. +||..+++.... +..+...+ +++|+|+|++|++
T Consensus 3 ~~~~~~~~----~~~v~~~~~~~v~--------------~~d~~~~~~~~~-------~~~~~~~~-~~~~s~dg~~l~~ 56 (331)
T 3u4y_A 3 AMFQTTSN----FGIVVEQHLRRIS--------------FFSTDTLEILNQ-------ITLGYDFV-DTAITSDCSNVVV 56 (331)
T ss_dssp ----CCCC----EEEEEEGGGTEEE--------------EEETTTCCEEEE-------EECCCCEE-EEEECSSSCEEEE
T ss_pred eeEcCCCC----EEEEEecCCCeEE--------------EEeCcccceeee-------EEccCCcc-eEEEcCCCCEEEE
Confidence 34666555 4688888999999 888876654322 33445556 9999999997766
Q ss_pred Ec--CCceEEEEeccCcccccccee-cccccccCCCeEEEEECCCCCEEEEEeCCC---cEEEEEccCCCCCCCCCCCCc
Q psy15549 99 GD--DVGKEIWYLTERESGIANVEF-ASDLSRHQKAVNVVRFSPNGELLASGDDES---TIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 99 ~~--d~~v~iw~~~~~~~~~~~~~~-~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg---~i~vwd~~~~~~~~~~~~~~~ 172 (621)
++ ++.|.+|+...+ .. ...+..+..+..+++|+|+|++|+++..++ .|.+||+.+++.+
T Consensus 57 ~~~~~~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~-------- 121 (331)
T 3u4y_A 57 TSDFCQTLVQIETQLE-------PPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFI-------- 121 (331)
T ss_dssp EESTTCEEEEEECSSS-------SCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEE--------
T ss_pred EeCCCCeEEEEECCCC-------ceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeE--------
Confidence 55 678999999876 22 444555666655599999999999655553 8999999887643
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCe-EEEEECCCCcEE----EEeccCCcceEEEEEcCCC
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNT-AIMWDVHKGKNL----GILTEHKKFVQGVAWDPKN 246 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~-i~vwd~~~~~~~----~~~~~~~~~v~~l~~sp~~ 246 (621)
..+. +.....+++|+|+|++|+++ ..++. |.+|++.....+ .........+..++|+|+|
T Consensus 122 -------------~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg 187 (331)
T 3u4y_A 122 -------------STIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDG 187 (331)
T ss_dssp -------------EEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTS
T ss_pred -------------EEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCC
Confidence 2222 34457899999999866555 55578 999998754332 1112344567899999999
Q ss_pred CEEEEEe-CCCcEEEEEccCcee---eeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 247 QYVATLS-SDRSLRTYSIQSKKV---ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 247 ~~l~s~~-~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
++|++++ .++.|.+||+.+++. +..+.. ...+..++|+|||++++++..
T Consensus 188 ~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~------------------------~~~~~~~~~spdg~~l~v~~~--- 240 (331)
T 3u4y_A 188 NFAFVANLIGNSIGILETQNPENITLLNAVGT------------------------NNLPGTIVVSRDGSTVYVLTE--- 240 (331)
T ss_dssp SEEEEEETTTTEEEEEECSSTTSCEEEEEEEC------------------------SSCCCCEEECTTSSEEEEECS---
T ss_pred CEEEEEeCCCCeEEEEECCCCcccceeeeccC------------------------CCCCceEEECCCCCEEEEEEc---
Confidence 9766555 588999999998876 444431 123467999999998876541
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
.++.|.+||+.+++
T Consensus 241 ------------------------------------------------------------------~~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 241 ------------------------------------------------------------------STVDVFNFNQLSGT 254 (331)
T ss_dssp ------------------------------------------------------------------SEEEEEEEETTTTE
T ss_pred ------------------------------------------------------------------CCCEEEEEECCCCc
Confidence 23557888888876
Q ss_pred e--eEEEecc---cc---cceEEEEEcCCCCeEEEEe-CCCcEEEEEecCCcC
Q psy15549 403 P--FAFIANI---HY---TKLTDITWSSDGKVLIASS-TDGYCSIISFGDNEI 446 (621)
Q Consensus 403 ~--~~~~~~~---h~---~~v~~~~~spdg~~l~s~s-~dg~i~iw~~~~~~~ 446 (621)
. +..+... +. .....++|+|||++|++++ .++.|.+|++.....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 255 LSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp EEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred eeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 5 3332211 11 1235689999999887655 567999999987654
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-23 Score=202.53 Aligned_cols=267 Identities=15% Similarity=0.134 Sum_probs=190.1
Q ss_pred EEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEcCCceEEEEecc-C
Q psy15549 34 VTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTE-R 112 (621)
Q Consensus 34 ~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~-~ 112 (621)
..++.++.|. +||+.+++.. .+..|...|.+++|+|+|++|++++++.|.+|++.. +
T Consensus 16 ~~~~~~~~i~--------------~~d~~~~~~~--------~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~ 73 (297)
T 2ojh_A 16 PGGSMRSSIE--------------IFNIRTRKMR--------VVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDP 73 (297)
T ss_dssp --CCCCEEEE--------------EEETTTTEEE--------EEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCC
T ss_pred CCCCcceeEE--------------EEeCCCCcee--------eeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCC
Confidence 3456788888 9988766532 245688899999999999999999999999999987 5
Q ss_pred ccccccceeccccccc-CCCeEEEEECCCCCEEEEEe--CCCcEEEEEcc--CCCCCCCCCCCCcccccccccceeeeee
Q psy15549 113 ESGIANVEFASDLSRH-QKAVNVVRFSPNGELLASGD--DESTIIVWKQK--TDQDLPEFPSSNLDEENVNKEHWIVTKI 187 (621)
Q Consensus 113 ~~~~~~~~~~~~~~~h-~~~V~~i~~sp~g~~l~s~s--~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (621)
........| ...+.+++|+|++++|++++ .++.+.||.++ ++.. ..
T Consensus 74 -------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~----------------------~~ 124 (297)
T 2ojh_A 74 -------SPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP----------------------RL 124 (297)
T ss_dssp -------SCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC----------------------EE
T ss_pred -------CceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce----------------------EE
Confidence 223333344 46788999999999999998 44556666554 3331 22
Q ss_pred ecCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEECCC-CcEEEEeccCCcceEEEEEcCCCCEEEEEe-CCCcEEEEEcc
Q psy15549 188 LRGHLEDVYDISWSPTSTHLI-SGSVDNTAIMWDVHK-GKNLGILTEHKKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQ 264 (621)
Q Consensus 188 ~~~~~~~v~~i~~spd~~~l~-s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~ 264 (621)
+..+ ..+.+++|+|++++|+ +++.++.+.||++.. +.....+..+...+.+++|+|++++|++++ .++.+++|++.
T Consensus 125 ~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 125 MTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp CCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 2333 3489999999999887 677899999998642 334456667888899999999999888776 48999999986
Q ss_pred -CceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccC
Q psy15549 265 -SKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLN 343 (621)
Q Consensus 265 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~ 343 (621)
.+.....+. .+...+.+++|+|+|++|++++. ++....+.
T Consensus 204 ~~~~~~~~~~-----------------------~~~~~~~~~~~s~dg~~l~~~~~-----~~~~~~~~----------- 244 (297)
T 2ojh_A 204 VDGSSVERIT-----------------------DSAYGDWFPHPSPSGDKVVFVSY-----DADVFDHP----------- 244 (297)
T ss_dssp TTSSCEEECC-----------------------CCSEEEEEEEECTTSSEEEEEEE-----ETTCCSCC-----------
T ss_pred CCCCCcEEEe-----------------------cCCcccCCeEECCCCCEEEEEEc-----CCCCCccc-----------
Confidence 333333332 22345688999999999988762 11000000
Q ss_pred CCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEe-cccccceEEEEEcC
Q psy15549 344 KPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIA-NIHYTKLTDITWSS 422 (621)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~h~~~v~~~~~sp 422 (621)
...++.|++||+.+++...... .+|...+.+++|+|
T Consensus 245 -------------------------------------------~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 281 (297)
T 2ojh_A 245 -------------------------------------------RDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSP 281 (297)
T ss_dssp -------------------------------------------SSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCT
T ss_pred -------------------------------------------ccCceEEEEEecCCCCceeeeccCCCCcccccceECC
Confidence 0023579999998886543331 25778899999999
Q ss_pred CCCeEEEEeCCC
Q psy15549 423 DGKVLIASSTDG 434 (621)
Q Consensus 423 dg~~l~s~s~dg 434 (621)
||++|++++.+.
T Consensus 282 dg~~l~~~~~~~ 293 (297)
T 2ojh_A 282 DGDEFAYVRYFP 293 (297)
T ss_dssp TSSEEEEEEECC
T ss_pred CCCEEEEEEecc
Confidence 999999887653
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-22 Score=202.20 Aligned_cols=272 Identities=11% Similarity=0.077 Sum_probs=202.8
Q ss_pred CCCCeEEEeccccccCCcceEEEEecC-------CceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGA-------DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~-------dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
....+..++|+|+++ +|++++. ++.|. +||..+++.... +. ....+
T Consensus 39 ~~~~~~~~~~s~dg~-----~l~~~~~~~~~~~~~~~v~--------------~~d~~~~~~~~~-------~~-~~~~~ 91 (353)
T 3vgz_A 39 VGKGAYEMAYSQQEN-----ALWLATSQSRKLDKGGVVY--------------RLDPVTLEVTQA-------IH-NDLKP 91 (353)
T ss_dssp EESSEEEEEEETTTT-----EEEEEECCCTTTEESEEEE--------------EECTTTCCEEEE-------EE-ESSCC
T ss_pred hccCccceEECCCCC-----EEEEEcCCCcCCCCCccEE--------------EEcCCCCeEEEE-------Ee-cCCCc
Confidence 345788999999998 7777663 56788 777766543222 22 23447
Q ss_pred EEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCC---------CeEEEEECCCCCEEEEEe--CCC
Q psy15549 85 NVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQK---------AVNVVRFSPNGELLASGD--DES 151 (621)
Q Consensus 85 ~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~---------~V~~i~~sp~g~~l~s~s--~dg 151 (621)
..++|+|+|++++++. ++.|.+|+...+ +....+..+.. .+.+++|+|+++++++++ .++
T Consensus 92 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 164 (353)
T 3vgz_A 92 FGATINNTTQTLWFGNTVNSAVTAIDAKTG-------EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKES 164 (353)
T ss_dssp CSEEEETTTTEEEEEETTTTEEEEEETTTC-------CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSC
T ss_pred ceEEECCCCCEEEEEecCCCEEEEEeCCCC-------eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCc
Confidence 7899999999666554 678999998876 33333333321 278899999999877765 478
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 231 (621)
.|.+||+.+++.. ..+..+...+.+++|+|++++|++++.++.|.+||+.+++.+..+.
T Consensus 165 ~i~~~d~~~~~~~---------------------~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~ 223 (353)
T 3vgz_A 165 VIWVVDGGNIKLK---------------------TAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKK 223 (353)
T ss_dssp EEEEEETTTTEEE---------------------EEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEcCCCCceE---------------------EEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEE
Confidence 9999999887643 3344455568889999999999999999999999999998887765
Q ss_pred c----CCcceEEEEEcCCCCEEEEEeCC-CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeee
Q psy15549 232 E----HKKFVQGVAWDPKNQYVATLSSD-RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLT 306 (621)
Q Consensus 232 ~----~~~~v~~l~~sp~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 306 (621)
. +...+.+++|+|++++|++++.+ +.|.+||+.+++.+..+.... ...++
T Consensus 224 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-------------------------~~~~~ 278 (353)
T 3vgz_A 224 LLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-------------------------SLAVL 278 (353)
T ss_dssp CCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-------------------------CCCEE
T ss_pred cCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-------------------------CceEE
Confidence 4 45567889999999988777654 899999999988776654211 14578
Q ss_pred ecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEE
Q psy15549 307 FSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIA 386 (621)
Q Consensus 307 ~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (621)
|+|+|++++++.
T Consensus 279 ~s~dg~~l~v~~-------------------------------------------------------------------- 290 (353)
T 3vgz_A 279 FNPARNEAYVTH-------------------------------------------------------------------- 290 (353)
T ss_dssp EETTTTEEEEEE--------------------------------------------------------------------
T ss_pred ECCCCCEEEEEE--------------------------------------------------------------------
Confidence 888888665543
Q ss_pred EEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCC
Q psy15549 387 VATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDG 434 (621)
Q Consensus 387 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg 434 (621)
..++.|.+||..+++.+..+.. ...+.+++|+|||++|+++..++
T Consensus 291 -~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 291 -RQAGKVSVIDAKSYKVVKTFDT--PTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp -TTTTEEEEEETTTTEEEEEEEC--CSEEEEEEECTTSCEEEEEEECC
T ss_pred -CCCCeEEEEECCCCeEEEEEec--CCCCCeEEEcCCCCEEEEEEccc
Confidence 1468899999999988887753 34789999999999877776553
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-22 Score=200.54 Aligned_cols=281 Identities=14% Similarity=0.229 Sum_probs=186.9
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc-C-CceEEEEe
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-D-VGKEIWYL 109 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d-~~v~iw~~ 109 (621)
.+++++.++.|+ +|++....... ... ...|...+.+++|+|+|++|++++ + +.+.+|++
T Consensus 7 l~~~~~~~~~v~--------------~~~~~~~~~~~----~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~ 67 (343)
T 1ri6_A 7 VYIASPESQQIH--------------VWNLNHEGALT----LTQ-VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRI 67 (343)
T ss_dssp EEEEEGGGTEEE--------------EEEECTTSCEE----EEE-EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEEeCCCCCeEE--------------EEEECCCCcEE----Eee-eEecCCCCceEEECCCCCEEEEeecCCCeEEEEEe
Confidence 555558899999 88885321111 111 234677899999999999888877 3 78999999
Q ss_pred ccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeee
Q psy15549 110 TERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL 188 (621)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (621)
..... .+..+..+..+. .+..++|+|++++|++++. ++.|.+||+..+... .....+
T Consensus 68 ~~~~~---~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~------------------~~~~~~ 125 (343)
T 1ri6_A 68 APDDG---ALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPV------------------GVVDVV 125 (343)
T ss_dssp CTTTC---CEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEE------------------EEEEEE
T ss_pred cCCCC---ceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccc------------------cccccc
Confidence 73211 112333333333 7889999999998876664 889999999522210 011222
Q ss_pred cCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCC-CcEEE----Eecc-CCcceEEEEEcCCCCEEEEEe-CCCcEEE
Q psy15549 189 RGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHK-GKNLG----ILTE-HKKFVQGVAWDPKNQYVATLS-SDRSLRT 260 (621)
Q Consensus 189 ~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~-~~~~~----~~~~-~~~~v~~l~~sp~~~~l~s~~-~dg~i~i 260 (621)
. ....+.+++|+|++++|++++ .++.|.+||+.+ ++... .+.. ....+.+++|+|++++|++++ .++.|.+
T Consensus 126 ~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~ 204 (343)
T 1ri6_A 126 E-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDV 204 (343)
T ss_dssp C-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred c-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEE
Confidence 3 334588999999999888887 799999999987 64432 2222 345788999999999876655 7899999
Q ss_pred EEccC--cee--eeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeee
Q psy15549 261 YSIQS--KKV--ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHV 336 (621)
Q Consensus 261 wd~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~ 336 (621)
|++.. ++. ...+... +. .......+..++|+|+|++|+++.
T Consensus 205 ~~~~~~~g~~~~~~~~~~~--~~---------------~~~~~~~~~~i~~s~dg~~l~v~~------------------ 249 (343)
T 1ri6_A 205 WELKDPHGNIECVQTLDMM--PE---------------NFSDTRWAADIHITPDGRHLYACD------------------ 249 (343)
T ss_dssp EESSCTTSCCEEEEEEECS--CT---------------TCCSCCCEEEEEECTTSSEEEEEE------------------
T ss_pred EEecCCCCcEEEEeecccc--Cc---------------cccccCCccceEECCCCCEEEEEe------------------
Confidence 99953 332 1111100 00 001122345788888888776433
Q ss_pred eeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCC--CC--ceeEEEecccc
Q psy15549 337 FTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQ--HA--SPFAFIANIHY 412 (621)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~--~~~~~~~~~h~ 412 (621)
..++.|.+||+. ++ +.+..+.. +.
T Consensus 250 ---------------------------------------------------~~~~~i~v~d~~~~~~~~~~~~~~~~-~~ 277 (343)
T 1ri6_A 250 ---------------------------------------------------RTASLITVFSVSEDGSVLSKEGFQPT-ET 277 (343)
T ss_dssp ---------------------------------------------------TTTTEEEEEEECTTSCCEEEEEEEEC-SS
T ss_pred ---------------------------------------------------cCCCEEEEEEEcCCCCceEEeeeecC-CC
Confidence 146788888887 22 33333422 33
Q ss_pred cceEEEEEcCCCCeEEEEe-CCCcEEEEEec
Q psy15549 413 TKLTDITWSSDGKVLIASS-TDGYCSIISFG 442 (621)
Q Consensus 413 ~~v~~~~~spdg~~l~s~s-~dg~i~iw~~~ 442 (621)
.+.+++|+|+|++|++++ .++.|.+|+++
T Consensus 278 -~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 278 -QPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp -SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred -ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 388999999999888887 68999999766
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.1e-24 Score=233.12 Aligned_cols=292 Identities=10% Similarity=0.070 Sum_probs=197.1
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCC---CeEEEEECCCCCEEEEEeCC---------
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQK---AVNVVRFSPNGELLASGDDE--------- 150 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~---~V~~i~~sp~g~~l~s~s~d--------- 150 (621)
.+.+++|+|||++++++.++.|++|+..++ .....+..|.. .|.+++|||||++|++++.+
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g-------~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETN-------TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYT 90 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGC-------CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCC
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCC-------cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecce
Confidence 467889999999888766889999999887 33344445554 49999999999999998764
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
+.|.+||+.+++.. .+ ....+|...+..++|||||+.|++++. +.|++||+.+++.....
T Consensus 91 ~~i~~~d~~~~~~~-~l------------------~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQ-SL------------------DPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp SEEEEEESSSCCCE-EC------------------CCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEE
T ss_pred eeEEEEECCCCceE-ec------------------cCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEe
Confidence 78889999988641 11 122345556889999999999999885 79999999998877666
Q ss_pred ccCCcce------------------EEEEEcCCCCEEEEEeCCC----------------------------------cE
Q psy15549 231 TEHKKFV------------------QGVAWDPKNQYVATLSSDR----------------------------------SL 258 (621)
Q Consensus 231 ~~~~~~v------------------~~l~~sp~~~~l~s~~~dg----------------------------------~i 258 (621)
..+...+ .+++|+|||++|++++.|+ .|
T Consensus 151 ~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l 230 (723)
T 1xfd_A 151 STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISL 230 (723)
T ss_dssp CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEE
T ss_pred cCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEE
Confidence 5544333 7899999999999887653 45
Q ss_pred EEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeee
Q psy15549 259 RTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFT 338 (621)
Q Consensus 259 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~ 338 (621)
++||+.+++....+..+.. .......+.+++|||||+++++... .
T Consensus 231 ~~~d~~~~~~~~~l~~~~~-----------------~~~~~~~~~~~~~SpDg~~l~~~~~-----~------------- 275 (723)
T 1xfd_A 231 HVIGLNGPTHDLEMMPPDD-----------------PRMREYYITMVKWATSTKVAVTWLN-----R------------- 275 (723)
T ss_dssp EEEESSSSCCCEECCCCCC-----------------GGGSSEEEEEEEESSSSEEEEEEEE-----T-------------
T ss_pred EEEECCCCceeEEeeCCcc-----------------CCCccceeEEEEEeCCCeEEEEEEc-----C-------------
Confidence 6666655543222211100 0011334667778888776654431 0
Q ss_pred ecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceE--
Q psy15549 339 RACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLT-- 416 (621)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~-- 416 (621)
...+..|++||+.+++....+...+...+.
T Consensus 276 ------------------------------------------------~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 307 (723)
T 1xfd_A 276 ------------------------------------------------AQNVSILTLCDATTGVCTKKHEDESEAWLHRQ 307 (723)
T ss_dssp ------------------------------------------------TSCEEEEEEEETTTCCEEEEEEEECSSCCCCC
T ss_pred ------------------------------------------------CCCeEEEEEEeCCCCcceEEEEeccCCEEecc
Confidence 002357899999998876655433444443
Q ss_pred --EEEEcCCCCeEEE--EeCCC------cEEEEE-ecCCc--CCcccCCCCCcccc-cCCCCCCCCcccCCC-c--ccHH
Q psy15549 417 --DITWSSDGKVLIA--SSTDG------YCSIIS-FGDNE--IGIPYVPPSGEESK-ENDPTKGEPVRSEDK-P--RSAE 479 (621)
Q Consensus 417 --~~~~spdg~~l~s--~s~dg------~i~iw~-~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~-~--~~~~ 479 (621)
.++|+|||+.|+. +..++ .|.+|+ ..++. ....+......+.. +.++++|+.++..+. + +.+.
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 387 (723)
T 1xfd_A 308 NEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQ 387 (723)
T ss_dssp CCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCE
T ss_pred CCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceE
Confidence 8899999998875 44677 455566 33444 14555443333333 579999998765433 3 6778
Q ss_pred Hhccc
Q psy15549 480 QAKGE 484 (621)
Q Consensus 480 ~w~~~ 484 (621)
+|.+.
T Consensus 388 l~~~~ 392 (723)
T 1xfd_A 388 LYSAN 392 (723)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 88753
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.3e-23 Score=201.55 Aligned_cols=274 Identities=12% Similarity=0.097 Sum_probs=194.4
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccc-cccC-cEEEEEEccCCCEEEEE-c-CCceEEE
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLS-RHQK-AVNVVRFSPNGELLASG-D-DVGKEIW 107 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~-~h~~-~V~~l~~spdg~~las~-~-d~~v~iw 107 (621)
+|++++.++.|. +||+.+++.... +. ++.. .+.+++|+|+|++++++ . ++.|.+|
T Consensus 3 ~~v~~~~~~~v~--------------~~d~~~~~~~~~-------~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 61 (337)
T 1pby_B 3 YILAPARPDKLV--------------VIDTEKMAVDKV-------ITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61 (337)
T ss_dssp EEEEEETTTEEE--------------EEETTTTEEEEE-------EECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEEcCCCCeEE--------------EEECCCCcEEEE-------EEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEE
Confidence 899999999999 888776543221 22 2222 47889999999876554 4 6789999
Q ss_pred EeccCccccccceecccccc-----cCCCeEEEEECCCCCEEEEEe------------CCCcEEEEEccCCCCCCCCCCC
Q psy15549 108 YLTERESGIANVEFASDLSR-----HQKAVNVVRFSPNGELLASGD------------DESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~-----h~~~V~~i~~sp~g~~l~s~s------------~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
++..+. ....+.. |...+..++|+|+|++|++++ .++.|.+||+.+++..
T Consensus 62 d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~------ 128 (337)
T 1pby_B 62 DLVTGE-------TLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR------ 128 (337)
T ss_dssp ETTTCC-------EEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE------
T ss_pred ECCCCC-------eEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE------
Confidence 987762 2222221 223577899999999998886 5799999999876542
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEE
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVA 250 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~ 250 (621)
..+.. ...+.+++|+|++++|+++ ++.|.+||+.+++.+..+..+.. ...+.|+|++.+|+
T Consensus 129 ---------------~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~ 189 (337)
T 1pby_B 129 ---------------KAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVW 189 (337)
T ss_dssp ---------------EEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCC
T ss_pred ---------------EEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEe
Confidence 22222 3457789999999988888 68899999999988877754431 11237899998776
Q ss_pred EEeCCC------------------------cEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeee
Q psy15549 251 TLSSDR------------------------SLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLT 306 (621)
Q Consensus 251 s~~~dg------------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 306 (621)
..+..+ .|.+||+.+++.. .+.. ..+...+.+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~---------------------~~~~~~~~~~~ 247 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREV---------------------RIMDVFYFSTA 247 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEE---------------------EECSSCEEEEE
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-Eeec---------------------CCCCCceeeEE
Confidence 554432 3577887776653 2110 01122345677
Q ss_pred ecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEE
Q psy15549 307 FSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIA 386 (621)
Q Consensus 307 ~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (621)
|+|||+++++
T Consensus 248 ~s~dg~~l~~---------------------------------------------------------------------- 257 (337)
T 1pby_B 248 VNPAKTRAFG---------------------------------------------------------------------- 257 (337)
T ss_dssp ECTTSSEEEE----------------------------------------------------------------------
T ss_pred ECCCCCEEEE----------------------------------------------------------------------
Confidence 7777776654
Q ss_pred EEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCC
Q psy15549 387 VATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 387 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
+ ++.|++||+.+++.+..+.. ...+.+++|+|||++|++++.++.|++||+.+++....+..+.
T Consensus 258 ~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 258 A--YNVLESFDLEKNASIKRVPL--PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp E--ESEEEEEETTTTEEEEEEEC--SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred e--CCeEEEEECCCCcCcceecC--CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 2 47899999999988777743 3468899999999999999999999999999998777765543
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-22 Score=197.17 Aligned_cols=286 Identities=13% Similarity=0.121 Sum_probs=196.8
Q ss_pred EEEccCCCE-EEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CCcEEEEEccCCCC
Q psy15549 87 VRFSPNGEL-LASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-ESTIIVWKQKTDQD 163 (621)
Q Consensus 87 l~~spdg~~-las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg~i~vwd~~~~~~ 163 (621)
..|.+++.+ ++++. ++.|.+|+...+ +....+..+...+ .++|+|+|++|++++. ++.|.+||+.+++.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~-------~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTL-------EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP 74 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTC-------CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCccc-------ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce
Confidence 346666665 44454 888999999876 3344444455566 9999999997766655 88999999988764
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC---eEEEEECCCCcEEEEeccCCcceEEE
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN---TAIMWDVHKGKNLGILTEHKKFVQGV 240 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~v~~l 240 (621)
. ...+..+.....+++|+|++++|+++..++ .|.+||+.+++.+..+..+ ....++
T Consensus 75 ~--------------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~ 133 (331)
T 3u4y_A 75 K--------------------VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGI 133 (331)
T ss_dssp E--------------------EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEE
T ss_pred e--------------------EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccce
Confidence 1 133445555555599999999999655553 8999999999988877544 456899
Q ss_pred EEcCCCCEEEEE-eCCCc-EEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 241 AWDPKNQYVATL-SSDRS-LRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 241 ~~sp~~~~l~s~-~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
+|+|+|++|+++ ..++. |.+|++.....+...... . .........++|+|+|++++++.
T Consensus 134 ~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~----------------~---~~~~~~~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 134 AISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE----------------F---ISGGTRPFNITFTPDGNFAFVAN 194 (331)
T ss_dssp EECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE----------------E---ECSSSSEEEEEECTTSSEEEEEE
T ss_pred EECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc----------------c---ccCCCCccceEECCCCCEEEEEe
Confidence 999999866655 45588 999998764332211000 0 01122347788888888766543
Q ss_pred ccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeC
Q psy15549 319 GCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDT 398 (621)
Q Consensus 319 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 398 (621)
..++.|++||+
T Consensus 195 ---------------------------------------------------------------------~~~~~v~v~d~ 205 (331)
T 3u4y_A 195 ---------------------------------------------------------------------LIGNSIGILET 205 (331)
T ss_dssp ---------------------------------------------------------------------TTTTEEEEEEC
T ss_pred ---------------------------------------------------------------------CCCCeEEEEEC
Confidence 14678999999
Q ss_pred CCCce---eEEEecccccceEEEEEcCCCCeEEEEe-CCCcEEEEEecCCcC--CcccC----CCCCc---ccccCCCCC
Q psy15549 399 QHASP---FAFIANIHYTKLTDITWSSDGKVLIASS-TDGYCSIISFGDNEI--GIPYV----PPSGE---ESKENDPTK 465 (621)
Q Consensus 399 ~~~~~---~~~~~~~h~~~v~~~~~spdg~~l~s~s-~dg~i~iw~~~~~~~--~~~~~----~~~~~---~~~~~~~~~ 465 (621)
.+++. +..+. ....+..++|+|||++|++++ .++.|.+||+.++++ ...+. ..... ...+.++++
T Consensus 206 ~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spd 283 (331)
T 3u4y_A 206 QNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKT 283 (331)
T ss_dssp SSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTT
T ss_pred CCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCC
Confidence 98887 66664 346788999999999776654 578899999998876 22221 11111 233588999
Q ss_pred CCCcc-cCCCcccHHHhcccCcccccc
Q psy15549 466 GEPVR-SEDKPRSAEQAKGEGKVLGEK 491 (621)
Q Consensus 466 ~~~~~-s~~~~~~~~~w~~~~~~~~~~ 491 (621)
++.+. +...++.+.+|++.++..+..
T Consensus 284 g~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 284 ETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp SSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred CCEEEEecCCCCcEEEEEecCCcccce
Confidence 99764 456677999999887754443
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-21 Score=191.46 Aligned_cols=259 Identities=11% Similarity=0.126 Sum_probs=173.1
Q ss_pred cccCcEEEEEEccCCCEEEEEc---CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcEE
Q psy15549 79 RHQKAVNVVRFSPNGELLASGD---DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTII 154 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~ 154 (621)
.+...+..++|+|||++++++. ++.|.+|++..+. ...+..+..+...+..++|+|+|++|++++ .++.|.
T Consensus 37 ~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~-----~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~ 111 (347)
T 3hfq_A 37 AATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQT-----AHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAE 111 (347)
T ss_dssp EECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTE-----EEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEE
T ss_pred eccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCc-----EEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEE
Confidence 4556788899999999444443 4689999996552 134444455777889999999999888887 779999
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeec---------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC-CC
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR---------GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH-KG 224 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~-~~ 224 (621)
+|++........+ ..+. .+...+.+++|+|+|+++++...++.|.+|++. ++
T Consensus 112 v~~~~~~g~~~~~------------------~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g 173 (347)
T 3hfq_A 112 VMKIAADGALTLT------------------DTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG 173 (347)
T ss_dssp EEEECTTSCEEEE------------------EEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS
T ss_pred EEEeCCCCCeeec------------------ceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC
Confidence 9999643221110 1111 123458899999999966666668899999998 45
Q ss_pred cEEE--Eecc-CCcceEEEEEcCCCCEEEEE-eCCCcEEEEEccC--ceeee--ecccCCCCCCCccccccccccccccC
Q psy15549 225 KNLG--ILTE-HKKFVQGVAWDPKNQYVATL-SSDRSLRTYSIQS--KKVIS--RACRSKLPVDSSHELFDKVVPLFHDD 296 (621)
Q Consensus 225 ~~~~--~~~~-~~~~v~~l~~sp~~~~l~s~-~~dg~i~iwd~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (621)
+... .+.. ....+..++|+|+|++|+++ ..++.|.+|++.. ++... .+..... ..
T Consensus 174 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~-----------------~~ 236 (347)
T 3hfq_A 174 QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPA-----------------DY 236 (347)
T ss_dssp CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCT-----------------TC
T ss_pred cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCC-----------------CC
Confidence 4322 2222 23357789999999977664 5678999999874 44321 1110000 00
Q ss_pred CcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCC
Q psy15549 297 TMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPL 376 (621)
Q Consensus 297 ~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (621)
.....+..++|+|||++|+++.
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~---------------------------------------------------------- 258 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSN---------------------------------------------------------- 258 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEE----------------------------------------------------------
T ss_pred CCCCcceeEEECCCCCEEEEEe----------------------------------------------------------
Confidence 1113467889999998876543
Q ss_pred ccCCCcEEEEEEcCCcEEEEeCCCC---ceeEEEecccccceEEEEEcCCCCeEEEEeC-CCcEEEEEec--CCcCC
Q psy15549 377 FKLPYRIVIAVATENNILLYDTQHA---SPFAFIANIHYTKLTDITWSSDGKVLIASST-DGYCSIISFG--DNEIG 447 (621)
Q Consensus 377 ~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~-dg~i~iw~~~--~~~~~ 447 (621)
..++.|.+|++... +.+..+. .+...+..++|+|||++|++++. ++.|.+|+++ ++++.
T Consensus 259 -----------~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 259 -----------RGYNTLAVFAVTADGHLTLIQQIS-TEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp -----------ETTTEEEEEEECGGGCEEEEEEEE-CSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred -----------CCCCEEEEEEECCCCcEEEeEEEe-cCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 23567888887632 2333332 34567889999999999888875 4899999664 45543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.3e-22 Score=196.57 Aligned_cols=271 Identities=13% Similarity=0.091 Sum_probs=204.3
Q ss_pred cCcEEEEEEccCCCEEEEEc--------CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEE-EeCCC
Q psy15549 81 QKAVNVVRFSPNGELLASGD--------DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS-GDDES 151 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~--------d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s-~s~dg 151 (621)
...+..++|+|+|++|++++ ++.|.+||...+ +....+.. ...+..++|+|+|++++. ...++
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~-------~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL-------EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNS 111 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC-------CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC-------eEEEEEec-CCCcceEEECCCCCEEEEEecCCC
Confidence 45688999999999888877 446899988765 33333332 344778999999996554 55679
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCC---------CCeEEEEECCCCCEEEEEe--CCCeEEEEE
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHL---------EDVYDISWSPTSTHLISGS--VDNTAIMWD 220 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~i~~spd~~~l~s~~--~dg~i~vwd 220 (621)
.|.+||..+++.+. .+..+. ..+.+++|+|+++++++++ .++.|.+||
T Consensus 112 ~v~~~d~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 112 AVTAIDAKTGEVKG---------------------RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp EEEEEETTTCCEEE---------------------EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEE
T ss_pred EEEEEeCCCCeeEE---------------------EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEc
Confidence 99999999887542 222221 1278999999999888776 478999999
Q ss_pred CCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCccc
Q psy15549 221 VHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKS 300 (621)
Q Consensus 221 ~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (621)
+.+++.+..+..+...+.+++|+|++++|++++.++.|.+||+.+++.+..+.... .....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-------------------~~~~~ 231 (353)
T 3vgz_A 171 GGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLD-------------------DGKEH 231 (353)
T ss_dssp TTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCC-------------------SSSCC
T ss_pred CCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCC-------------------CCCCc
Confidence 99999988887566668899999999999999999999999999998876654211 11223
Q ss_pred ceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCC
Q psy15549 301 FFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLP 380 (621)
Q Consensus 301 ~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (621)
.+.+++|+|+|++++++.
T Consensus 232 ~~~~~~~s~dg~~l~~~~-------------------------------------------------------------- 249 (353)
T 3vgz_A 232 FFINISLDTARQRAFITD-------------------------------------------------------------- 249 (353)
T ss_dssp CEEEEEEETTTTEEEEEE--------------------------------------------------------------
T ss_pred ccceEEECCCCCEEEEEe--------------------------------------------------------------
Confidence 457789999998776644
Q ss_pred CcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEe-CCCcEEEEEecCCcCCcccCCCCCcccc
Q psy15549 381 YRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASS-TDGYCSIISFGDNEIGIPYVPPSGEESK 459 (621)
Q Consensus 381 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s-~dg~i~iw~~~~~~~~~~~~~~~~~~~~ 459 (621)
..++.|.+||..+++.+..+..++ ...++|+|+|++|++++ .++.|.+||..+++....+.... ....
T Consensus 250 -------~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~ 318 (353)
T 3vgz_A 250 -------SKAAEVLVVDTRNGNILAKVAAPE---SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-HPNS 318 (353)
T ss_dssp -------SSSSEEEEEETTTCCEEEEEECSS---CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-EEEE
T ss_pred -------CCCCEEEEEECCCCcEEEEEEcCC---CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-CCCe
Confidence 135789999999998888775432 25799999999766555 68999999999998877766543 4566
Q ss_pred cCCCCCCCCcccC
Q psy15549 460 ENDPTKGEPVRSE 472 (621)
Q Consensus 460 ~~~~~~~~~~~s~ 472 (621)
+.++++|+.+..+
T Consensus 319 ~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 319 LALSADGKTLYVS 331 (353)
T ss_dssp EEECTTSCEEEEE
T ss_pred EEEcCCCCEEEEE
Confidence 7788888855443
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.90 E-value=8e-22 Score=190.73 Aligned_cols=237 Identities=14% Similarity=0.145 Sum_probs=177.4
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecc-ccccccceeeccccccc-cCcE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTE-RESGIANVEFASDLSRH-QKAV 84 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~-~~~~~~~~~~~~~~~~h-~~~V 84 (621)
.....|...|.+++|+|+++ +|++++ ++.|. +||+.+ +..... ...| ...|
T Consensus 35 ~~~~~~~~~v~~~~~spdg~-----~l~~~~-~~~i~--------------~~d~~~~~~~~~~-------~~~~~~~~~ 87 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGK-----YLLLNS-EGLLY--------------RLSLAGDPSPEKV-------DTGFATICN 87 (297)
T ss_dssp EEEEEESSCCEEEEECTTSS-----EEEEEE-TTEEE--------------EEESSSCCSCEEC-------CCTTCCCBC
T ss_pred eeeccCCcceEeeEECCCCC-----EEEEEc-CCeEE--------------EEeCCCCCCceEe-------ccccccccc
Confidence 34556788999999999998 899886 77888 888877 543222 3344 4778
Q ss_pred EEEEEccCCCEEEEEc---CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEE-EEeCCCcEEEEEccC
Q psy15549 85 NVVRFSPNGELLASGD---DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLA-SGDDESTIIVWKQKT 160 (621)
Q Consensus 85 ~~l~~spdg~~las~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~-s~s~dg~i~vwd~~~ 160 (621)
.+++|+|+|++|++++ ++...||.+..... ....+..+ ..+..++|+|++++|+ +++.++.++||+++.
T Consensus 88 ~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKVEFGKSAIYLLPSTGG------TPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp SCCEECTTSSEEEEEECTTTSSCEEEEEETTCC------CCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred cceEECCCCCEEEEEEeCCCCcceEEEEECCCC------ceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 9999999999999887 24677777764322 12233333 3488999999999887 778899999999754
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECC-CCcEEEEeccCCcceE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVH-KGKNLGILTEHKKFVQ 238 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~-~~~~~~~~~~~~~~v~ 238 (621)
.... ...+..+...+.+++|+|++++|++++ .++.+.+|++. .+..+..+..|...+.
T Consensus 161 ~~~~--------------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 220 (297)
T 2ojh_A 161 DSGV--------------------ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDW 220 (297)
T ss_dssp TTCC--------------------EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEE
T ss_pred CCCc--------------------ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccC
Confidence 3211 144566778899999999999888766 58899999886 5666778888888899
Q ss_pred EEEEcCCCCEEEEEeCC-----------CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 239 GVAWDPKNQYVATLSSD-----------RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
+++|+|+|++|++++.+ +.|.+||+.+++...... ...+...+.+++|
T Consensus 221 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~---------------------~~~~~~~~~~~~~ 279 (297)
T 2ojh_A 221 FPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD---------------------LFGGQGTMNSPNW 279 (297)
T ss_dssp EEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE---------------------EEESTTTSCSCCB
T ss_pred CeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec---------------------cCCCCcccccceE
Confidence 99999999999988776 569999998875432221 0122335678999
Q ss_pred cCCCCeEEecc
Q psy15549 308 SPDGQLLIAPS 318 (621)
Q Consensus 308 spdg~~l~~~s 318 (621)
+|+|++|++++
T Consensus 280 spdg~~l~~~~ 290 (297)
T 2ojh_A 280 SPDGDEFAYVR 290 (297)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 99999999887
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.2e-22 Score=215.50 Aligned_cols=319 Identities=15% Similarity=0.107 Sum_probs=207.8
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
..|.+++|||| . +++.+. ++.|. +||+.+++.. .+..+...+.+++|||||
T Consensus 82 ~~v~~~~~spd-~-----~~~~~~-~~~i~--------------~~d~~~~~~~--------~l~~~~~~~~~~~~SpdG 132 (706)
T 2z3z_A 82 FPSFRTLDAGR-G-----LVVLFT-QGGLV--------------GFDMLARKVT--------YLFDTNEETASLDFSPVG 132 (706)
T ss_dssp CCCEEEEETTT-T-----EEEEEE-TTEEE--------------EEETTTTEEE--------EEECCTTCCTTCEECTTS
T ss_pred cCceeEEECCC-C-----eEEEEE-CCEEE--------------EEECCCCceE--------EccCCcccccCCcCCCCC
Confidence 57999999999 5 555553 48888 8888765432 234566778999999999
Q ss_pred CEEEEEcCCceEEEEecc-----CccccccceecccccccCC--------------CeEEEEECCCCCEEEEEe------
Q psy15549 94 ELLASGDDVGKEIWYLTE-----RESGIANVEFASDLSRHQK--------------AVNVVRFSPNGELLASGD------ 148 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~-----~~~~~~~~~~~~~~~~h~~--------------~V~~i~~sp~g~~l~s~s------ 148 (621)
++|+++.++.|.+|++.. +. .......+.. .+.+++|+|||++|++++
T Consensus 133 ~~la~~~~~~i~v~~~~~~~~~~g~-------~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~ 205 (706)
T 2z3z_A 133 DRVAYVRNHNLYIARGGKLGEGMSR-------AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMV 205 (706)
T ss_dssp SEEEEEETTEEEEEECBCTTSCCCC-------CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTS
T ss_pred CEEEEEECCeEEEEecCcccccCCC-------cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCC
Confidence 999998899999999987 42 1221222222 258899999999999987
Q ss_pred ---------------------------CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEEC
Q psy15549 149 ---------------------------DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS 201 (621)
Q Consensus 149 ---------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s 201 (621)
.+..|++||+.+++.... .....|...+.+++|+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~-------------------~~~~~~~~~~~~~~~s 266 (706)
T 2z3z_A 206 KPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYL-------------------QTGEPKEKFLTNLSWS 266 (706)
T ss_dssp CCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEEC-------------------CCCSCTTCEEEEEEEC
T ss_pred ceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEee-------------------ccCCCCceeEeeEEEE
Confidence 446799999987753210 1112466789999999
Q ss_pred CCCCEEEEEeCCC-----eEEEEECCCCcEEEEec--cCCc---ceEEEEEcC--CCCEEEEEeCCCcEEEEEcc-Ccee
Q psy15549 202 PTSTHLISGSVDN-----TAIMWDVHKGKNLGILT--EHKK---FVQGVAWDP--KNQYVATLSSDRSLRTYSIQ-SKKV 268 (621)
Q Consensus 202 pd~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~--~~~~---~v~~l~~sp--~~~~l~s~~~dg~i~iwd~~-~~~~ 268 (621)
|||++|++++.++ .|++||+.+++....+. .+.. .+.+++|+| +|++|++++.|+.+++|.+. ++..
T Consensus 267 pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~ 346 (706)
T 2z3z_A 267 PDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRL 346 (706)
T ss_dssp TTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCE
T ss_pred CCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCE
Confidence 9999999987765 89999999984433332 1222 246789999 99999999999999999886 5555
Q ss_pred eeecccCCCCCCCccccccccccccccCCcccceee-eeecCCCCeEEeccccccCCCC--CCcceeeeeeeeecccCCC
Q psy15549 269 ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR-LTFSPDGQLLIAPSGCLENSDS--TRKPISVTHVFTRACLNKP 345 (621)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~spdg~~l~~~s~~~~~~d~--~i~~~~~~~~~~~~~~~~~ 345 (621)
+..+..+ ...+.. ++|+|||+.|++++. .++ ...+|..... ...
T Consensus 347 ~~~l~~~-----------------------~~~v~~~~~~spdg~~l~~~~~----~~~~~~~~l~~~d~~------~~~ 393 (706)
T 2z3z_A 347 IRQVTKG-----------------------EWEVTNFAGFDPKGTRLYFEST----EASPLERHFYCIDIK------GGK 393 (706)
T ss_dssp EEECCCS-----------------------SSCEEEEEEECTTSSEEEEEES----SSCTTCBEEEEEETT------CCC
T ss_pred EEecCCC-----------------------CeEEEeeeEEcCCCCEEEEEec----CCCCceEEEEEEEcC------CCC
Confidence 5544321 223445 799999998887663 232 3455544310 011
Q ss_pred ceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC----CcEEEEeCCCCceeEEEecccccceEEEEEc
Q psy15549 346 AVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE----NNILLYDTQHASPFAFIANIHYTKLTDITWS 421 (621)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~s 421 (621)
...+. +...+..+.|+| ++++++..+.+ +.|++||+.+++ ...+ . +...+....|.
T Consensus 394 ~~~l~-~~~~~~~~~~sp----------------dg~~l~~~~~~~~~p~~i~l~d~~~~~-~~~~-~-~~~~~~~~~~~ 453 (706)
T 2z3z_A 394 TKDLT-PESGMHRTQLSP----------------DGSAIIDIFQSPTVPRKVTVTNIGKGS-HTLL-E-AKNPDTGYAMP 453 (706)
T ss_dssp CEESC-CSSSEEEEEECT----------------TSSEEEEEEECSSCSCEEEEEESSSCE-EEEE-E-CC------CCC
T ss_pred ceecc-CCCceEEEEECC----------------CCCEEEEEecCCCCCcEEEEEECCCCe-Eeec-c-ccchhhhcCCC
Confidence 12222 333455666665 77777776554 469999999887 3333 2 33345444444
Q ss_pred CCCCeEEEEeCCC--cEEEEEe
Q psy15549 422 SDGKVLIASSTDG--YCSIISF 441 (621)
Q Consensus 422 pdg~~l~s~s~dg--~i~iw~~ 441 (621)
+.. .+..-+.|| .+..|-+
T Consensus 454 ~~~-~~~~~~~~g~~~~~~~~~ 474 (706)
T 2z3z_A 454 EIR-TGTIMAADGQTPLYYKLT 474 (706)
T ss_dssp CEE-EEEEECTTSSSEEEEEEE
T ss_pred CcE-EEEEEcCCCCEEEEEEEE
Confidence 332 233334455 5555554
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=219.12 Aligned_cols=339 Identities=13% Similarity=0.148 Sum_probs=210.7
Q ss_pred EEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccC---cEEEEEEccCC
Q psy15549 17 LSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK---AVNVVRFSPNG 93 (621)
Q Consensus 17 ~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~---~V~~l~~spdg 93 (621)
.+++|+||++ +++++ .|+.|+ +||+.++..... +.+|.. .|.+++|||||
T Consensus 19 ~~~~~s~dg~-----~~~~~-~d~~i~--------------~~~~~~g~~~~~-------~~~~~~~~~~~~~~~~SpDg 71 (719)
T 1z68_A 19 FFPNWISGQE-----YLHQS-ADNNIV--------------LYNIETGQSYTI-------LSNRTMKSVNASNYGLSPDR 71 (719)
T ss_dssp CCCEESSSSE-----EEEEC-TTSCEE--------------EEESSSCCEEEE-------ECHHHHHTTTCSEEEECTTS
T ss_pred CccEECCCCe-----EEEEc-CCCCEE--------------EEEcCCCcEEEE-------EccccccccceeeEEECCCC
Confidence 3789999996 66665 589999 999887764322 333433 48999999999
Q ss_pred CEEEEEcC----------CceEEEEeccCccccccceec--ccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 94 ELLASGDD----------VGKEIWYLTERESGIANVEFA--SDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 94 ~~las~~d----------~~v~iw~~~~~~~~~~~~~~~--~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
++|+++++ +.+.+|++..+. .. ..+ ...+..++|||||+.||++. ++.|++|++.++
T Consensus 72 ~~la~~~~~~~~~~~s~~~~i~~~d~~~g~-------~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g 140 (719)
T 1z68_A 72 QFVYLESDYSKLWRYSYTATYYIYDLSNGE-------FVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGD 140 (719)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEETTTTE-------ECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred CeEEEEecCceeEEeecceEEEEEECCCCc-------cccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCC
Confidence 99998764 679999998762 21 222 24688899999999999986 789999999887
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCC---------CeEEEEECCCCCEEEEEeCCC------------------
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLE---------DVYDISWSPTSTHLISGSVDN------------------ 214 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~i~~spd~~~l~s~~~dg------------------ 214 (621)
........... ...+.++.. ...+++|+|||++|++++.|.
T Consensus 141 ~~~~l~~~~~~------------~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~ 208 (719)
T 1z68_A 141 PPFQITFNGRE------------NKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPR 208 (719)
T ss_dssp CCEECCCCCBT------------TTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCE
T ss_pred CcEEEecCCCc------------CCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcc
Confidence 65321100000 001112221 225899999999999987652
Q ss_pred ----------------eEEEEECCCCcEE---E-----EeccCCcceEEEEEcCCCCEEEEEeCC----CcEEEEE----
Q psy15549 215 ----------------TAIMWDVHKGKNL---G-----ILTEHKKFVQGVAWDPKNQYVATLSSD----RSLRTYS---- 262 (621)
Q Consensus 215 ----------------~i~vwd~~~~~~~---~-----~~~~~~~~v~~l~~sp~~~~l~s~~~d----g~i~iwd---- 262 (621)
.|++||+.+++.. . .+..|...+..++|+||++++++.... ..|.+||
T Consensus 209 ~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~ 288 (719)
T 1z68_A 209 TINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFRED 288 (719)
T ss_dssp EEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSS
T ss_pred ceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCC
Confidence 7889999887642 1 133578889999999998777764433 2488899
Q ss_pred ccCceeeeecccCCCCCCCccccccccccccccCCccccee-----eeeecCCCCeEEeccccccCCCCCCcceeeeeee
Q psy15549 263 IQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR-----RLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVF 337 (621)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~ 337 (621)
+.+++....+.. ....+...+. .++|+|||+.++..... .++...+|-...
T Consensus 289 ~~~g~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~---~~g~~~l~~~~~-- 344 (719)
T 1z68_A 289 WQTWDCPKTQEH-------------------IEESRTGWAGGFFVSTPVFSYDAISYYKIFSD---KDGYKHIHYIKD-- 344 (719)
T ss_dssp SSSEECCGGGEE-------------------EEECSSSCSSSSSCCCCEECTTSSCEEEEEEC---TTSCEEEEEESS--
T ss_pred CCCCceEEEEec-------------------ccccCCceEccccCCccEECCCCCeEEEEEEc---cCCceEEEEEEC--
Confidence 777765433310 0001122233 68999999977653211 334333332210
Q ss_pred eecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC-----CcEEEEeCCC--Cce-eEEEec
Q psy15549 338 TRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE-----NNILLYDTQH--ASP-FAFIAN 409 (621)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~--~~~-~~~~~~ 409 (621)
. ......+..+...+..+ .++ +++.++..+.+ +.+++|.+.. +.. ...+..
T Consensus 345 --~--~~~~~~lt~~~~~v~~~----------------~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~ 403 (719)
T 1z68_A 345 --T--VENAIQITSGKWEAINI----------------FRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTC 403 (719)
T ss_dssp --C--STTCEECSCSSSCEEEE----------------EEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESST
T ss_pred --C--CCceEecccCceEEEEE----------------EEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccC
Confidence 0 11112222222222221 122 45667666654 7788887654 321 223311
Q ss_pred ---ccccceEEEEEcCCCCeEEEE-eCC--CcEEEEEecCCcCCccc
Q psy15549 410 ---IHYTKLTDITWSSDGKVLIAS-STD--GYCSIISFGDNEIGIPY 450 (621)
Q Consensus 410 ---~h~~~v~~~~~spdg~~l~s~-s~d--g~i~iw~~~~~~~~~~~ 450 (621)
+|...+..+.|+|||++|+.. +.+ ..+.+|++.+++....+
T Consensus 404 ~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~~ 450 (719)
T 1z68_A 404 HLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKIL 450 (719)
T ss_dssp TTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEEe
Confidence 255678899999999988754 333 46889998877654333
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-20 Score=185.09 Aligned_cols=267 Identities=9% Similarity=0.128 Sum_probs=174.1
Q ss_pred ccCcEEEEEEccCCCEEEEEcC-----CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcE
Q psy15549 80 HQKAVNVVRFSPNGELLASGDD-----VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTI 153 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~d-----~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i 153 (621)
+...+..++|+|||++|++++. +.+.+|++..... .+..+.....+......+++ ++++|++++ .++.|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g---~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v 122 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG---TLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSI 122 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT---EEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC---cEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEE
Confidence 6677888999999999998874 5899999986421 12333334445566778888 788777766 67899
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCc-------
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGK------- 225 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~------- 225 (621)
.+|++.....+..+...... .... ......+...+.+++|+|+|++|++++. ++.|.+|++....
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~---~g~~----~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~ 195 (361)
T 3scy_A 123 TVFPIGQDGALLPASDVIEF---KGSG----PDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEK 195 (361)
T ss_dssp EEEEBCTTSCBCSCSEEEEC---CCCC----SCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCC
T ss_pred EEEEeCCCCcCcccceeEEc---cCCC----CCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccc
Confidence 99999865544322100000 0000 0001123445789999999997766654 7899999987543
Q ss_pred E------EEEeccCCcceEEEEEcCCCCEEEEEe-CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCc
Q psy15549 226 N------LGILTEHKKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298 (621)
Q Consensus 226 ~------~~~~~~~~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (621)
. ......+...+..++|+|+|++|++++ .++.|.+|++.+++......... ....
T Consensus 196 l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~------------------~~~~ 257 (361)
T 3scy_A 196 FLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA------------------DTVN 257 (361)
T ss_dssp CEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEES------------------CSSC
T ss_pred eeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEec------------------CCCC
Confidence 1 111223455678999999999888777 58999999998765422111000 0011
Q ss_pred ccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCcc
Q psy15549 299 KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFK 378 (621)
Q Consensus 299 ~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (621)
......++|+|||++|+++..
T Consensus 258 ~~~~~~i~~spdg~~l~v~~~----------------------------------------------------------- 278 (361)
T 3scy_A 258 AQGSGDIHLSPDGKYLYASNR----------------------------------------------------------- 278 (361)
T ss_dssp CCCEEEEEECTTSSEEEEEEC-----------------------------------------------------------
T ss_pred CCCcccEEECCCCCEEEEECC-----------------------------------------------------------
Confidence 123468899999998876541
Q ss_pred CCCcEEEEEEc-CCcEEEEeCC--CCc--eeEEEecccccceEEEEEcCCCCeEEEEe-CCCcEEEEEec--CCcCC
Q psy15549 379 LPYRIVIAVAT-ENNILLYDTQ--HAS--PFAFIANIHYTKLTDITWSSDGKVLIASS-TDGYCSIISFG--DNEIG 447 (621)
Q Consensus 379 ~~~~~l~~~~~-dg~i~iwd~~--~~~--~~~~~~~~h~~~v~~~~~spdg~~l~s~s-~dg~i~iw~~~--~~~~~ 447 (621)
. ++.|.+|++. +++ .+..+.. ...+.+++|+|||++|++++ .++.|.+|+++ ++++.
T Consensus 279 ----------~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 279 ----------LKADGVAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLT 343 (361)
T ss_dssp ----------SSSCEEEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred ----------CCCCEEEEEEEcCCCCcEEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEe
Confidence 2 4678888875 344 2333322 45688999999999998887 67999998766 55543
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.89 E-value=7.3e-22 Score=210.61 Aligned_cols=196 Identities=11% Similarity=0.101 Sum_probs=143.6
Q ss_pred CCCCeEEEeccccccCCcceEEEEecC-CceEEeeeccCccccccceeEEeccccccccceeecccccccc-CcEEEEEE
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGA-DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ-KAVNVVRF 89 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~-dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~l~~ 89 (621)
+..+|++++|+|||+ +||+++. ||.++ ||++..+... .+..|. ..|.+++|
T Consensus 20 ~~~~~~~~~~~~DG~-----~la~~s~~~g~~~--------------lw~~~~g~~~--------~lt~~~~~~~~~~~~ 72 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGD-----KLLVVGFSEGSVN--------------AYLYDGGETV--------KLNREPINSVLDPHY 72 (582)
T ss_dssp HHSCEEEEEEEETTT-----EEEEEEEETTEEE--------------EEEEETTEEE--------ECCSSCCSEECEECT
T ss_pred hccchheeecCCCCC-----eEEEEEccCCcee--------------EEEEcCCCcE--------eeecccccccccccC
Confidence 456899999999999 9998877 99999 8988554322 244454 68999999
Q ss_pred ccCCCEEEEEcC----CceEEEEecc--CccccccceecccccccCCCeEEEEECCCCC--EEEEEeCCCcEEEEEccCC
Q psy15549 90 SPNGELLASGDD----VGKEIWYLTE--RESGIANVEFASDLSRHQKAVNVVRFSPNGE--LLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 90 spdg~~las~~d----~~v~iw~~~~--~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~--~l~s~s~dg~i~vwd~~~~ 161 (621)
||| +++++++. ....+|.+.. .+.. . .+..+ ..+...+|+|+|+ ++++++. +.+.+||+.++
T Consensus 73 spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~----~---~l~~~-~~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g 142 (582)
T 3o4h_A 73 GVG-RVILVRDVSKGAEQHALFKVNTSRPGEE----Q---RLEAV-KPMRILSGVDTGEAVVFTGATE-DRVALYALDGG 142 (582)
T ss_dssp TCS-EEEEEEECSTTSCCEEEEEEETTSTTCC----E---ECTTS-CSBEEEEEEECSSCEEEEEECS-SCEEEEEEETT
T ss_pred CCC-eEEEEeccCCCCcceEEEEEeccCCCcc----c---cccCC-CCceeeeeCCCCCeEEEEecCC-CCceEEEccCC
Confidence 999 77776552 4567877765 3211 1 12111 1234568888876 3444444 45569999887
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC----CeEEEEECCCCcEEEEeccCCcce
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD----NTAIMWDVHKGKNLGILTEHKKFV 237 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~v 237 (621)
+.. .+..+.. .+++|+|||++|++++.+ +.|++||+.+++.. .+..|...+
T Consensus 143 ~~~----------------------~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~ 197 (582)
T 3o4h_A 143 GLR----------------------ELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSF 197 (582)
T ss_dssp EEE----------------------EEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEE
T ss_pred cEE----------------------EeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCcc
Confidence 532 2222222 789999999999988776 78999999888764 667888889
Q ss_pred EEEEEcCCCCEEEEEeCCC--cEEEEEccCceee
Q psy15549 238 QGVAWDPKNQYVATLSSDR--SLRTYSIQSKKVI 269 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg--~i~iwd~~~~~~~ 269 (621)
..++|+|||++|+++..++ .|++||+.+++..
T Consensus 198 ~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 198 SSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred ccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 9999999999999888888 8999999888765
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-20 Score=186.84 Aligned_cols=240 Identities=11% Similarity=0.173 Sum_probs=160.9
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCC-ceEEeeeccCccccccceeEEec--cccccccceeeccccccccCcEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGAD-SHVFDYLLKIPHRLKTGKIWYLT--ERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~d-g~v~~~d~~~~~~~~~~~iw~~~--~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
..|...+.+++|+|+++ +|++++.+ +.|. +|++. ++.. .....+..+. .+.+
T Consensus 34 ~~~~~~~~~~~~spdg~-----~l~~~~~~~~~v~--------------~~~~~~~~~~~-----~~~~~~~~~~-~~~~ 88 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKR-----YLYVGVRPEFRVL--------------AYRIAPDDGAL-----TFAAESALPG-SLTH 88 (343)
T ss_dssp EECSSCCCCEEECTTSS-----EEEEEETTTTEEE--------------EEEECTTTCCE-----EEEEEEECSS-CCSE
T ss_pred EecCCCCceEEECCCCC-----EEEEeecCCCeEE--------------EEEecCCCCce-----eeccccccCC-CCcE
Confidence 45677899999999998 88888776 8999 88876 3221 1122233333 7899
Q ss_pred EEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcEEEEEccCCCC
Q psy15549 87 VRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTIIVWKQKTDQD 163 (621)
Q Consensus 87 l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~vwd~~~~~~ 163 (621)
++|+|+|++|++++ ++.|.+|++..+. .......+..+ ..+.+++|+|++++|++++ .++.|.+||+.+...
T Consensus 89 ~~~s~dg~~l~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 89 ISTDHQGQFVFVGSYNAGNVSVTRLEDGL----PVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTE----EEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred EEEcCCCCEEEEEecCCCeEEEEECCCCc----cccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 99999999887665 6679999995221 11233333333 4588999999999888877 899999999987322
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCC--CcE--EEEec---cC--
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHK--GKN--LGILT---EH-- 233 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~--~~~--~~~~~---~~-- 233 (621)
+... ............+.+++|+|++++|++++ .++.|.+|++.. ++. ...+. ..
T Consensus 164 ~~~~---------------~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (343)
T 1ri6_A 164 LVAQ---------------DPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFS 228 (343)
T ss_dssp EEEE---------------EEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCC
T ss_pred eeee---------------cccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccc
Confidence 1100 00011122345788999999999776555 789999999953 432 22222 11
Q ss_pred -CcceEEEEEcCCCCEEEEEe-CCCcEEEEEccC--c--eeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 234 -KKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQS--K--KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 234 -~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
...+..++|+|+|++|+++. .++.|.+||+.. + +.+..+.. ...+.+++|
T Consensus 229 ~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~------------------------~~~~~~~~~ 284 (343)
T 1ri6_A 229 DTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT------------------------ETQPRGFNV 284 (343)
T ss_dssp SCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC------------------------SSSCCCEEE
T ss_pred ccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC------------------------CCccceEEE
Confidence 23566899999999887554 689999999972 2 22222211 112567899
Q ss_pred cCCCCeEEecc
Q psy15549 308 SPDGQLLIAPS 318 (621)
Q Consensus 308 spdg~~l~~~s 318 (621)
+|+|++|++++
T Consensus 285 s~dg~~l~~~~ 295 (343)
T 1ri6_A 285 DHSGKYLIAAG 295 (343)
T ss_dssp CTTSSEEEEEC
T ss_pred CCCCCEEEEec
Confidence 99998877665
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-20 Score=192.71 Aligned_cols=211 Identities=14% Similarity=0.138 Sum_probs=152.6
Q ss_pred cCcEEEEEEccCCCEEEEEcCCceEEEEeccCccc------cccce--ecccccccCCCeEEEEECCCCCEEE----EEe
Q psy15549 81 QKAVNVVRFSPNGELLASGDDVGKEIWYLTERESG------IANVE--FASDLSRHQKAVNVVRFSPNGELLA----SGD 148 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~------~~~~~--~~~~~~~h~~~V~~i~~sp~g~~l~----s~s 148 (621)
...++.+++++++.++++++.+++++|+....... ..... .......+...|.+++|+|+|++|+ +|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 34688999999999999998667999886532100 00000 0001123567899999999999999 788
Q ss_pred CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEE
Q psy15549 149 DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHKGKNL 227 (621)
Q Consensus 149 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~~ 227 (621)
.|+.|+|||+.+......- ....+.....+.+|...|.+++|+|+ +.+|++++.||.|++||++++..+
T Consensus 116 ~d~~v~iwd~~~~~~~~~~----------~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~ 185 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQ----------QKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV 185 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCS----------SCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE
T ss_pred CCceEEEEEccccccCCcC----------CcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce
Confidence 9999999998765100000 00001113556789999999999997 789999999999999999998777
Q ss_pred EEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 228 GILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
....+|...|.+++|+|+|++|++|+.||.|++||++ ++....+..+.. ....+...+.+++|
T Consensus 186 ~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~----------------~~~~~~~~v~~v~w 248 (434)
T 2oit_A 186 CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPF----------------YESDHPVRVLDVLW 248 (434)
T ss_dssp EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTT----------------CCTTSCEEEEEEEE
T ss_pred eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcc----------------cCCCCceeEEEEEE
Confidence 6777788999999999999999999999999999998 444444322110 00122346899999
Q ss_pred cCCCCeEEecc
Q psy15549 308 SPDGQLLIAPS 318 (621)
Q Consensus 308 spdg~~l~~~s 318 (621)
++++.++++.+
T Consensus 249 ~~~~~~l~~~~ 259 (434)
T 2oit_A 249 IGTYVFAIVYA 259 (434)
T ss_dssp EETTEEEEEEE
T ss_pred ecCceEEEEEc
Confidence 99998886544
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-20 Score=192.19 Aligned_cols=212 Identities=13% Similarity=0.132 Sum_probs=156.0
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccc-------cccee-eccccccccCcE
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESG-------IANVE-FASDLSRHQKAV 84 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~-------~~~~~-~~~~~~~h~~~V 84 (621)
...+..+++++++. ++++|+.++ ++ ||+....... ..... .......|...|
T Consensus 36 ~~~~n~lavs~~~~-----~l~~~~~dg-v~--------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 95 (434)
T 2oit_A 36 KERSSLLAVSNKYG-----LVFAGGASG-LQ--------------IFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPI 95 (434)
T ss_dssp CSCCBCEEEETTTT-----EEEEEETTE-EE--------------EEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCE
T ss_pred CCCccEEEEecCCC-----EEEEECCCE-EE--------------EEEchHhhhhcccccCcccccccCccccccCCCcc
Confidence 34689999999998 999999888 77 4443211000 00000 000112356789
Q ss_pred EEEEEccCCCEEE----EEc-CCceEEEEeccCcc----ccccceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEE
Q psy15549 85 NVVRFSPNGELLA----SGD-DVGKEIWYLTERES----GIANVEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTII 154 (621)
Q Consensus 85 ~~l~~spdg~~la----s~~-d~~v~iw~~~~~~~----~~~~~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~ 154 (621)
.+++|+|+|++|+ +|+ |+.|+||++..... ....+.....+.+|...|.+++|+|+ +.+|++++.||+|+
T Consensus 96 ~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~ 175 (434)
T 2oit_A 96 HHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIA 175 (434)
T ss_dssp EEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEE
T ss_pred cEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEE
Confidence 9999999999999 666 88899999876411 00112234567789999999999997 78999999999999
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC-
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH- 233 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~- 233 (621)
+||++++... ....+|...|++++|+|+|++|++|+.||.|++||++ ++....+..|
T Consensus 176 iwD~~~~~~~---------------------~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~ 233 (434)
T 2oit_A 176 VLQVTETVKV---------------------CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPP 233 (434)
T ss_dssp EEEESSSEEE---------------------EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCT
T ss_pred EEEcCCCcce---------------------eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCc
Confidence 9999887432 3445688899999999999999999999999999998 6655555433
Q ss_pred ------CcceEEEEEcCCCCEEEEE-eCCC------cEEEEEccCc
Q psy15549 234 ------KKFVQGVAWDPKNQYVATL-SSDR------SLRTYSIQSK 266 (621)
Q Consensus 234 ------~~~v~~l~~sp~~~~l~s~-~~dg------~i~iwd~~~~ 266 (621)
...|.+++|++++.++++. ..+| .+++|+++..
T Consensus 234 ~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 234 FYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 3389999999988877643 3443 3899999764
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-20 Score=185.98 Aligned_cols=286 Identities=10% Similarity=0.034 Sum_probs=184.5
Q ss_pred EEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccccc-CcEEEEEEccCCCE
Q psy15549 17 LSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ-KAVNVVRFSPNGEL 95 (621)
Q Consensus 17 ~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~l~~spdg~~ 95 (621)
+.+++++++. ++++++.++.|. +||+.+++.... +..+. ..+..++|+|+|++
T Consensus 3 ~g~~~~~~~~-----~~v~~~~~~~v~--------------~~d~~~~~~~~~-------~~~~~~~~~~~~~~s~dg~~ 56 (349)
T 1jmx_B 3 TGPALKAGHE-----YMIVTNYPNNLH--------------VVDVASDTVYKS-------CVMPDKFGPGTAMMAPDNRT 56 (349)
T ss_dssp -CCCCCTTCE-----EEEEEETTTEEE--------------EEETTTTEEEEE-------EECSSCCSSCEEEECTTSSE
T ss_pred ccccccCCCE-----EEEEeCCCCeEE--------------EEECCCCcEEEE-------EecCCCCCCceeEECCCCCE
Confidence 3567888887 999999999999 888776543221 22221 25788999999987
Q ss_pred EEEE-c-CCceEEEEeccCccccccceecccccc-c-----CCCeEEEEECCCCCEEEEEeCC------------CcEEE
Q psy15549 96 LASG-D-DVGKEIWYLTERESGIANVEFASDLSR-H-----QKAVNVVRFSPNGELLASGDDE------------STIIV 155 (621)
Q Consensus 96 las~-~-d~~v~iw~~~~~~~~~~~~~~~~~~~~-h-----~~~V~~i~~sp~g~~l~s~s~d------------g~i~v 155 (621)
++++ . ++.|.+|++..+ .....+.. + ...+..++|+|+|++|++++.+ +.|.+
T Consensus 57 ~~v~~~~~~~i~~~d~~t~-------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~ 129 (349)
T 1jmx_B 57 AYVLNNHYGDIYGIDLDTC-------KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEV 129 (349)
T ss_dssp EEEEETTTTEEEEEETTTT-------EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred EEEEeCCCCcEEEEeCCCC-------cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEE
Confidence 6544 3 778999998765 33333322 1 2347889999999999998865 89999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCc
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKK 235 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 235 (621)
||+.+++....+ .... +...+.+++|+|+|+ +++++ +.|.+||+.+++.+..+..+..
T Consensus 130 ~d~~~~~~~~~~------------------~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~ 187 (349)
T 1jmx_B 130 FSTADGLEAKPV------------------RTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNW 187 (349)
T ss_dssp EEGGGGGGBCCS------------------EEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTC
T ss_pred EECCCcccccee------------------eecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceecccccccc
Confidence 999885433221 2222 334688999999999 65554 3499999999988877653320
Q ss_pred ------------------------ceEEEEEcCCCCEEEEEe-CCCcEEEEEccCceeeeecccCCCCCCCccccccccc
Q psy15549 236 ------------------------FVQGVAWDPKNQYVATLS-SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVV 290 (621)
Q Consensus 236 ------------------------~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (621)
....+++++++....... ....+..++..+++... +.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------------- 249 (349)
T 1jmx_B 188 NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHT-QE----------------- 249 (349)
T ss_dssp CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEE-EE-----------------
T ss_pred CCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEe-cc-----------------
Confidence 233455555442110000 00011123333322110 00
Q ss_pred cccccCCcccceeeeeecC-CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecC
Q psy15549 291 PLFHDDTMKSFFRRLTFSP-DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELK 369 (621)
Q Consensus 291 ~~~~~~~~~~~i~~~~~sp-dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (621)
.......+.+++|+| +|+++++
T Consensus 250 ----~~~~~~~~~~~~~sp~dg~~l~~----------------------------------------------------- 272 (349)
T 1jmx_B 250 ----FADLTELYFTGLRSPKDPNQIYG----------------------------------------------------- 272 (349)
T ss_dssp ----EEECSSCEEEEEECSSCTTEEEE-----------------------------------------------------
T ss_pred ----cccCCCcceeeEecCCCCCEEEE-----------------------------------------------------
Confidence 000112345667777 7666543
Q ss_pred CCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcc
Q psy15549 370 PSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIP 449 (621)
Q Consensus 370 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~ 449 (621)
+ ++.|++||+.+++.+..+.. ...+.+++|+|||++|++++.++.|++||+.+++.+..
T Consensus 273 -----------------~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 273 -----------------V--LNRLAKYDLKQRKLIKAANL--DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp -----------------E--ESEEEEEETTTTEEEEEEEC--SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEE
T ss_pred -----------------E--cCeEEEEECccCeEEEEEcC--CCCccceEECCCCCEEEEecCCCeEEEEeccccceeee
Confidence 2 57899999999988777753 34578999999999999988899999999999887776
Q ss_pred cCCC
Q psy15549 450 YVPP 453 (621)
Q Consensus 450 ~~~~ 453 (621)
+..+
T Consensus 332 ~~~~ 335 (349)
T 1jmx_B 332 IKLP 335 (349)
T ss_dssp EECS
T ss_pred eecC
Confidence 6554
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.87 E-value=5e-21 Score=189.05 Aligned_cols=293 Identities=11% Similarity=0.048 Sum_probs=201.2
Q ss_pred CEEEEEc-CCceEEEEeccCccccccceecccccc-cCC-CeEEEEECCCCCEEE-EEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 94 ELLASGD-DVGKEIWYLTERESGIANVEFASDLSR-HQK-AVNVVRFSPNGELLA-SGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 94 ~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~-~V~~i~~sp~g~~l~-s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
.+|++++ ++.|.+||...+ +....+.. +.. .+..++|+|+|++++ ++..++.|.+||+.+++.+..+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~-- 72 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM-------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRI-- 72 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEE--
T ss_pred cEEEEcCCCCeEEEEECCCC-------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeE--
Confidence 3566665 889999999876 33443332 211 478899999998664 5566789999999887653211
Q ss_pred CCcccccccccceeeeeeecCC----CCCeEEEEECCCCCEEEEEe------------CCCeEEEEECCCCcEEEEeccC
Q psy15549 170 SNLDEENVNKEHWIVTKILRGH----LEDVYDISWSPTSTHLISGS------------VDNTAIMWDVHKGKNLGILTEH 233 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~----~~~v~~i~~spd~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~~~ 233 (621)
..++ ...+.+++|+|+|++|++++ .++.|.+||+.+++.+..+..
T Consensus 73 ------------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~- 133 (337)
T 1pby_B 73 ------------------DLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA- 133 (337)
T ss_dssp ------------------ECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-
T ss_pred ------------------EcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-
Confidence 1111 22567899999999998886 579999999999888777754
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
...+.+++|+|++++|+++ ++.|.+||+.+++....+..... ...+.|+|+|++
T Consensus 134 ~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~------------------------~~~~~~s~dg~~ 187 (337)
T 1pby_B 134 PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW------------------------EAETYAQPDVLA 187 (337)
T ss_dssp CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT------------------------TTTTBCCCBCCC
T ss_pred CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc------------------------CCCceeCCCccE
Confidence 4557889999999988877 68899999999887765532210 023478999998
Q ss_pred EEeccccccCCCCCCc--ceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 314 LIAPSGCLENSDSTRK--PISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 314 l~~~s~~~~~~d~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
+++... ..... +|... .... .. ..| . ....
T Consensus 188 l~~~~~-----~~~~~~~~~~~~------~~~~-------~~-------~~~------------------~-----~~~~ 219 (337)
T 1pby_B 188 VWNQHE-----SSGVMATPFYTA------RKDI-------DP-------ADP------------------T-----AYRT 219 (337)
T ss_dssp CCCCCT-----TTTEEEEEEEEE------BTTS-------CT-------TSG------------------G-----GEEE
T ss_pred Eeeecc-----CCCceeeeeecc------cccc-------cc-------ccc------------------c-----cccc
Confidence 876551 11110 00000 0000 00 000 0 0112
Q ss_pred cEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCccc
Q psy15549 392 NILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRS 471 (621)
Q Consensus 392 ~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 471 (621)
.|.+||+.+++........+...+.+++|+|||++|+++ ++.|++||+.+++....+... .....+.++++++.++.
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~ 296 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWL 296 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEE
T ss_pred ceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEE
Confidence 689999999887533223466678899999999999988 799999999998877666543 34567789999998887
Q ss_pred CCCcccHHHhcccC-cccccc
Q psy15549 472 EDKPRSAEQAKGEG-KVLGEK 491 (621)
Q Consensus 472 ~~~~~~~~~w~~~~-~~~~~~ 491 (621)
+..++.+.+|+... +.+..+
T Consensus 297 ~~~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 297 GGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp ESBSSEEEEEETTTCCEEEEE
T ss_pred EcCCCcEEEEECcCCcEEEEE
Confidence 78889999998653 433333
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.3e-21 Score=205.52 Aligned_cols=269 Identities=14% Similarity=0.135 Sum_probs=188.1
Q ss_pred cCcEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccC-CCeEEEEECCCCCEEEEEeC---CCcEE
Q psy15549 81 QKAVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQ-KAVNVVRFSPNGELLASGDD---ESTII 154 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~i~~sp~g~~l~s~s~---dg~i~ 154 (621)
..+|++++|+|||+.||+++ ++.+.||++..+ .. ..+..|. ..+..++|+|| +++++++. +...+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g-------~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~ 91 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG-------ET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHA 91 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT-------EE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCC-------Cc-EeeecccccccccccCCCC-eEEEEeccCCCCcceE
Confidence 56899999999999999876 788999998554 22 3344454 68999999999 77777765 45567
Q ss_pred EEEccC--CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEEEec
Q psy15549 155 VWKQKT--DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTH-LISGSVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 155 vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~-l~s~~~dg~i~vwd~~~~~~~~~~~ 231 (621)
+|.+.. .... ..+.. ...+...+|+||++. +++++.++.+.+||+.+++......
T Consensus 92 l~~~~~~~~g~~---------------------~~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~ 149 (582)
T 3o4h_A 92 LFKVNTSRPGEE---------------------QRLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR 149 (582)
T ss_dssp EEEEETTSTTCC---------------------EECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred EEEEeccCCCcc---------------------ccccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec
Confidence 766654 2221 11111 223446688888753 3334444556699999887655544
Q ss_pred cCCcceEEEEEcCCCCEEEEEeCC----CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 232 EHKKFVQGVAWDPKNQYVATLSSD----RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
.+. .+++|+|||++|++++.+ +.|++||+.+++... +. .+...+..++|
T Consensus 150 ~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~-l~-----------------------~~~~~~~~~~~ 202 (582)
T 3o4h_A 150 LPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV-FD-----------------------SGEGSFSSASI 202 (582)
T ss_dssp ESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEE-EC-----------------------CSSCEEEEEEE
T ss_pred CCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceE-ee-----------------------cCCCccccceE
Confidence 333 789999999999988877 789999998876542 22 22344688999
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
||||++|+++.
T Consensus 203 SpDG~~l~~~~--------------------------------------------------------------------- 213 (582)
T 3o4h_A 203 SPGMKVTAGLE--------------------------------------------------------------------- 213 (582)
T ss_dssp CTTSCEEEEEE---------------------------------------------------------------------
T ss_pred CCCCCEEEEcc---------------------------------------------------------------------
Confidence 99999988432
Q ss_pred EcCC--cEEEEeCCCCceeEEEecccccceEEEE--------EcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcc
Q psy15549 388 ATEN--NILLYDTQHASPFAFIANIHYTKLTDIT--------WSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEE 457 (621)
Q Consensus 388 ~~dg--~i~iwd~~~~~~~~~~~~~h~~~v~~~~--------~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~ 457 (621)
.++ .|++||+.+++.. .+ ..|...+..++ |+|||.++++++.||.+++|++ ++... .+.+.+
T Consensus 214 -~~~~~~i~~~d~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v 285 (582)
T 3o4h_A 214 -TAREARLVTVDPRDGSVE-DL-ELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNH 285 (582)
T ss_dssp -CSSCEEEEEECTTTCCEE-EC-CCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEE
T ss_pred -CCCeeEEEEEcCCCCcEE-Ec-cCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCce
Confidence 334 7899999988876 43 45766677777 9999988899999999999999 55444 233456
Q ss_pred cccCCCCCCCCcccCCCc---ccHHHhcccC
Q psy15549 458 SKENDPTKGEPVRSEDKP---RSAEQAKGEG 485 (621)
Q Consensus 458 ~~~~~~~~~~~~~s~~~~---~~~~~w~~~~ 485 (621)
..+.++ ++..+++.+.+ ..+++|+..+
T Consensus 286 ~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 286 GRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred EEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 667777 77776655433 4455665544
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-20 Score=189.48 Aligned_cols=289 Identities=10% Similarity=0.033 Sum_probs=187.4
Q ss_pred EeccccccCCcceEEEEecC-CceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEE
Q psy15549 19 VDIQLKQEKDNCYRIVTGGA-DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLA 97 (621)
Q Consensus 19 l~~spd~~~~~~~~l~tg~~-dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~la 97 (621)
.+|||||+ +|++++. +|...+| +||+.+++.... ..++...+..++|+|||+.|+
T Consensus 41 ~~~SpDg~-----~l~~~~~~~g~~~l~------------~~d~~~g~~~~l-------t~~~~~~~~~~~~spdg~~l~ 96 (388)
T 3pe7_A 41 KCFTRDGS-----KLLFGGAFDGPWNYY------------LLDLNTQVATQL-------TEGRGDNTFGGFLSPDDDALF 96 (388)
T ss_dssp CCBCTTSC-----EEEEEECTTSSCEEE------------EEETTTCEEEEC-------CCSSCBCSSSCEECTTSSEEE
T ss_pred ccCCCCCC-----EEEEEEcCCCCceEE------------EEeCCCCceEEe-------eeCCCCCccceEEcCCCCEEE
Confidence 88999998 8888876 7865544 778776654322 445555666778999999999
Q ss_pred EEc-CCceEEEEeccCccccccceecccccccCCCeEEEE--ECCCCCEEEEE----------------------eCCCc
Q psy15549 98 SGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVR--FSPNGELLASG----------------------DDEST 152 (621)
Q Consensus 98 s~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~--~sp~g~~l~s~----------------------s~dg~ 152 (621)
.++ +..+.+|++..+. ....+..+...+.... ++|++++++.. ..+..
T Consensus 97 ~~~~~~~l~~~d~~~g~-------~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
T 3pe7_A 97 YVKDGRNLMRVDLATLE-------ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR 169 (388)
T ss_dssp EEETTTEEEEEETTTCC-------EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred EEeCCCeEEEEECCCCc-------ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence 988 6689999998763 2222333444444333 48999988743 23467
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCC------CeEEEEECCCCc
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVD------NTAIMWDVHKGK 225 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~d------g~i~vwd~~~~~ 225 (621)
|.+||+.+++. ..+..+...+..+.|+| ||+.|+.+..+ ..|.++|+..+.
T Consensus 170 l~~~d~~~g~~----------------------~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 170 LMRVDLKTGES----------------------TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp EEEEETTTCCE----------------------EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred EEEEECCCCce----------------------EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence 99999988753 33445667789999999 99998887753 378888886654
Q ss_pred EEEEeccCC--cceEEEEEcCCCCEEEEEeC-CC----cEEEEEccCceeeeecccCCCCCCCccccccccccccccCCc
Q psy15549 226 NLGILTEHK--KFVQGVAWDPKNQYVATLSS-DR----SLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298 (621)
Q Consensus 226 ~~~~~~~~~--~~v~~l~~sp~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (621)
. ..+..+. ..+..++|+|||+.|+..+. ++ .|.+||+.+++......... . . ..
T Consensus 228 ~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~------~------~------~~ 288 (388)
T 3pe7_A 228 M-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPA------C------S------HL 288 (388)
T ss_dssp C-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECC------E------E------EE
T ss_pred e-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCC------c------e------ee
Confidence 4 4444444 35788999999998766544 22 39999998876432211000 0 0 00
Q ss_pred ccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCcc
Q psy15549 299 KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFK 378 (621)
Q Consensus 299 ~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (621)
......++|+|||+.|++... +
T Consensus 289 ~~~~~~~~~spdg~~l~~~~~-----~----------------------------------------------------- 310 (388)
T 3pe7_A 289 MSNYDGSLMVGDGSDAPVDVQ-----D----------------------------------------------------- 310 (388)
T ss_dssp EECTTSSEEEEEECCC----------------------------------------------------------------
T ss_pred eecCCCCeEccCCCcceeEee-----e-----------------------------------------------------
Confidence 000123478888887775430 0
Q ss_pred CCCcEEEEEEcCCcEEEEeCCCCceeEEEeccccc-----------ceEEEEEcCCCCeEEEEe-CCCcEEEEEec
Q psy15549 379 LPYRIVIAVATENNILLYDTQHASPFAFIANIHYT-----------KLTDITWSSDGKVLIASS-TDGYCSIISFG 442 (621)
Q Consensus 379 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~-----------~v~~~~~spdg~~l~s~s-~dg~i~iw~~~ 442 (621)
..-.....+..|++||+.+++..... .|.. .+.+++|+|||++|+.++ .+|...||.++
T Consensus 311 ---~~~~~~~~~~~i~~~d~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 311 ---DSGYKIENDPFLYVFNMKNGTQHRVA--RHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp ---------CCCCEEEEEETTTTEEEEEE--ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ---ccccccCCCCEEEEEeccCCceEEec--cccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 00011124568999999987654332 2444 578899999999888665 57888888765
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-18 Score=174.24 Aligned_cols=244 Identities=8% Similarity=0.106 Sum_probs=160.5
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCC----ceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGAD----SHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~d----g~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
+......++|+||++ +|++++.+ +.|. +|++..... .+........+......+
T Consensus 48 ~~~~p~~l~~spdg~-----~l~~~~~~~~~~~~v~--------------~~~~~~~~g---~~~~~~~~~~~~~~p~~~ 105 (361)
T 3scy_A 48 EVANPSYLIPSADGK-----FVYSVNEFSKDQAAVS--------------AFAFDKEKG---TLHLLNTQKTMGADPCYL 105 (361)
T ss_dssp ECSCCCSEEECTTSS-----EEEEEECCSSTTCEEE--------------EEEEETTTT---EEEEEEEEECSSSCEEEE
T ss_pred cCCCCceEEECCCCC-----EEEEEEccCCCCCcEE--------------EEEEeCCCC---cEEEeeEeccCCCCcEEE
Confidence 566788899999998 88888875 7888 787765311 111223334455667788
Q ss_pred EEccCCCEEEEEc--CCceEEEEeccCccccccceeccc--------ccccCCCeEEEEECCCCCEEEEEe-CCCcEEEE
Q psy15549 88 RFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASD--------LSRHQKAVNVVRFSPNGELLASGD-DESTIIVW 156 (621)
Q Consensus 88 ~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~--------~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~vw 156 (621)
++ ++++|++++ ++.+.+|++...+... ....... ...+...+.+++|+|+|++|++++ .++.|.+|
T Consensus 106 ~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~ 182 (361)
T 3scy_A 106 TT--NGKNIVTANYSGGSITVFPIGQDGALL-PASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKF 182 (361)
T ss_dssp EE--CSSEEEEEETTTTEEEEEEBCTTSCBC-SCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EE--CCCEEEEEECCCCEEEEEEeCCCCcCc-ccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEE
Confidence 88 888887775 6779999997543210 0000000 111233468899999999776655 57899999
Q ss_pred EccCCCC------CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCcE--E
Q psy15549 157 KQKTDQD------LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGKN--L 227 (621)
Q Consensus 157 d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~~~~--~ 227 (621)
++..... +... -........+...+..++|+|||++|++++ .++.|.+|++.++.. +
T Consensus 183 ~~~~~~~~~~~~~l~~~--------------~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~ 248 (361)
T 3scy_A 183 NINPNANADNKEKFLTK--------------GTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEI 248 (361)
T ss_dssp EECTTCCTTTCCCCEEE--------------EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEE
T ss_pred EEcCCCCcccccceeec--------------ccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEe
Confidence 9876542 1000 000012233456688999999999888777 589999999987754 2
Q ss_pred EEe---ccCCcceEEEEEcCCCCEEEEEeCC--CcEEEEEcc--Cce--eeeecccCCCCCCCccccccccccccccCCc
Q psy15549 228 GIL---TEHKKFVQGVAWDPKNQYVATLSSD--RSLRTYSIQ--SKK--VISRACRSKLPVDSSHELFDKVVPLFHDDTM 298 (621)
Q Consensus 228 ~~~---~~~~~~v~~l~~sp~~~~l~s~~~d--g~i~iwd~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (621)
..+ ..+......++|+|+|++|+++..+ +.|.+|++. +++ .+..+..
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~------------------------ 304 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT------------------------ 304 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC------------------------
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC------------------------
Confidence 222 2233456899999999998777665 899999996 333 2222211
Q ss_pred ccceeeeeecCCCCeEEecc
Q psy15549 299 KSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 299 ~~~i~~~~~spdg~~l~~~s 318 (621)
...+.+++|+|||++|++++
T Consensus 305 g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 305 GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp SSCCCEEEECTTSCEEEEEE
T ss_pred CCCCceEEECCCCCEEEEEE
Confidence 12346889999999887765
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-19 Score=197.96 Aligned_cols=340 Identities=13% Similarity=0.141 Sum_probs=206.3
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccC-----cEEEE
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK-----AVNVV 87 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~-----~V~~l 87 (621)
.....+++|+||++ +|+++ |+.|+ +|++.+++.... +.+|.. ....+
T Consensus 16 ~~~~~~~~w~~dg~-----~~~~~--~~~i~--------------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 67 (740)
T 4a5s_A 16 RLKLYSLRWISDHE-----YLYKQ--ENNIL--------------VFNAEYGNSSVF-------LENSTFDEFGHSINDY 67 (740)
T ss_dssp CCCCCCEEECSSSE-----EEEEE--TTEEE--------------EEETTTCCEEEE-------ECTTTTTTCCSCCCEE
T ss_pred cccccccEECCCCc-----EEEEc--CCcEE--------------EEECCCCceEEE-------Eechhhhhhcccccce
Confidence 34577999999998 88887 89999 888877764322 344432 33458
Q ss_pred EEccCCCEEEEEcC----------CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Q psy15549 88 RFSPNGELLASGDD----------VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWK 157 (621)
Q Consensus 88 ~~spdg~~las~~d----------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd 157 (621)
+|||||++|+.+++ +.+.+|++.++ . ...+..|...+..++|||||+.||.+. ++.|++|+
T Consensus 68 ~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~-------~-~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~ 138 (740)
T 4a5s_A 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR-------Q-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKI 138 (740)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT-------E-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEES
T ss_pred EECCCCCEEEEEECCeeeEEEccceEEEEEECCCC-------c-EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEE
Confidence 89999999998874 45679999876 2 234667778899999999999999985 68999999
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCC---------CCeEEEEECCCCCEEEEEeCCC--------------
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHL---------EDVYDISWSPTSTHLISGSVDN-------------- 214 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~i~~spd~~~l~s~~~dg-------------- 214 (621)
+.++...+....... ...+.++. .....+.|||||++||.++.|.
T Consensus 139 ~~~~~~~~lt~~g~~------------~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~ 206 (740)
T 4a5s_A 139 EPNLPSYRITWTGKE------------DIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE 206 (740)
T ss_dssp STTSCCEECCSCCBT------------TTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST
T ss_pred CCCCceEEEcCCCCc------------cceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCC
Confidence 988764311100000 00111111 2224589999999999875321
Q ss_pred ----------------------eEEEEECCC---Cc--EEEEec------cCCcceEEEEEcCCCCEEEEEeC----CCc
Q psy15549 215 ----------------------TAIMWDVHK---GK--NLGILT------EHKKFVQGVAWDPKNQYVATLSS----DRS 257 (621)
Q Consensus 215 ----------------------~i~vwd~~~---~~--~~~~~~------~~~~~v~~l~~sp~~~~l~s~~~----dg~ 257 (621)
.|++||+.+ ++ ....+. +|...+..++|+|||+.++.... +..
T Consensus 207 ~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~ 286 (740)
T 4a5s_A 207 SLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSV 286 (740)
T ss_dssp TCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEE
T ss_pred CCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEE
Confidence 588899988 73 223333 37788999999999997665543 236
Q ss_pred EEEEEccCce----eeeecccCCCCCCCccccccccccccccCCcccc-----eeeeeecCCCCeEE-eccccccCCCCC
Q psy15549 258 LRTYSIQSKK----VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSF-----FRRLTFSPDGQLLI-APSGCLENSDST 327 (621)
Q Consensus 258 i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----i~~~~~spdg~~l~-~~s~~~~~~d~~ 327 (621)
|.+||+.+++ +...... ....+..+ ...++|+|||+.|+ ..+. .++.
T Consensus 287 i~~~d~~tg~~~~~~~~~~~l-------------------~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~----~~G~ 343 (740)
T 4a5s_A 287 MDICDYDESSGRWNCLVARQH-------------------IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISN----EEGY 343 (740)
T ss_dssp EEEEEEETTTTEEEECGGGCE-------------------EEECSSSCSSSSSCCCCEECTTSSEEEEEEEC----TTSC
T ss_pred EEEEECCCCccccceeEEEEe-------------------eeccCCceEccCcCCCceEcCCCCEEEEEEEc----CCCc
Confidence 9999998876 2211100 00011112 23689999999877 5542 3343
Q ss_pred CcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC-----C--cEEEEeCCC
Q psy15549 328 RKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE-----N--NILLYDTQH 400 (621)
Q Consensus 328 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g--~i~iwd~~~ 400 (621)
..+|-.. ........+......+..+.. .+++.|+..+.. + .|+..++..
T Consensus 344 ~~l~~~~------~~~~~~~~lT~g~~~v~~~~~-----------------~d~~~i~f~~~~~~~~~~~~~ly~v~~~g 400 (740)
T 4a5s_A 344 RHICYFQ------IDKKDCTFITKGTWEVIGIEA-----------------LTSDYLYYISNEYKGMPGGRNLYKIQLID 400 (740)
T ss_dssp EEEEEEE------TTCSSCEESCCSSSCEEEEEE-----------------ECSSEEEEEESCGGGCTTCBEEEEEETTE
T ss_pred eEEEEEE------CCCCceEecccCCEEEEEEEE-----------------EeCCEEEEEEecCCCCCceeEEEEEECCC
Confidence 3333221 001222223322322222211 124555544443 2 455555554
Q ss_pred CceeEEEec---ccccceEEEEEcCCCCeEEEEeCC---CcEEEEEecCCcCC
Q psy15549 401 ASPFAFIAN---IHYTKLTDITWSSDGKVLIASSTD---GYCSIISFGDNEIG 447 (621)
Q Consensus 401 ~~~~~~~~~---~h~~~v~~~~~spdg~~l~s~s~d---g~i~iw~~~~~~~~ 447 (621)
+.....+.. +....+..+.|||+|++++..... ..+.+++..+++..
T Consensus 401 ~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~ 453 (740)
T 4a5s_A 401 YTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGL 453 (740)
T ss_dssp EEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEE
T ss_pred CCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEE
Confidence 433223321 123568899999999987755433 35777777766443
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=9e-21 Score=207.63 Aligned_cols=329 Identities=11% Similarity=0.048 Sum_probs=202.9
Q ss_pred EEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCC---CeEEEEECCCCCEEEEEeC---------CCcE
Q psy15549 86 VVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQK---AVNVVRFSPNGELLASGDD---------ESTI 153 (621)
Q Consensus 86 ~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~---~V~~i~~sp~g~~l~s~s~---------dg~i 153 (621)
+++|+|||++++++.++.|++|++..+ .....+.+|.. .+.+++|||||++|++++. ++.|
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i 92 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETG-------QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATY 92 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSC-------CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCC-------cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEE
Confidence 678999998887777999999999876 33333334433 4889999999999998876 7899
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cc
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL-TE 232 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~ 232 (621)
++||+.+++.+... . ....+..++|||||+.|+++. ++.|++|++.+++..... .+
T Consensus 93 ~~~d~~~g~~~~~~-------------------~---l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~ 149 (719)
T 1z68_A 93 YIYDLSNGEFVRGN-------------------E---LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNG 149 (719)
T ss_dssp EEEETTTTEECCSS-------------------C---CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCC
T ss_pred EEEECCCCccccce-------------------e---cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCC
Confidence 99999988642100 1 124578899999999999986 789999999888765433 22
Q ss_pred CCcce-----------------EEEEEcCCCCEEEEEeCCC----------------------------------cEEEE
Q psy15549 233 HKKFV-----------------QGVAWDPKNQYVATLSSDR----------------------------------SLRTY 261 (621)
Q Consensus 233 ~~~~v-----------------~~l~~sp~~~~l~s~~~dg----------------------------------~i~iw 261 (621)
+...| .+++|+|||++|++++.|. .|++|
T Consensus 150 ~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~ 229 (719)
T 1z68_A 150 RENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFII 229 (719)
T ss_dssp BTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred CcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEE
Confidence 22212 4899999999999988652 67788
Q ss_pred EccCceee--eecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCccee----eee
Q psy15549 262 SIQSKKVI--SRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPIS----VTH 335 (621)
Q Consensus 262 d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~----~~~ 335 (621)
|+.+++.. ..+... .....+...+.+++||||++++++..... .....+.+|+ ...
T Consensus 230 d~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~SpD~~~~~~~~~~~-~~~~~l~~~d~~~~~~~ 291 (719)
T 1z68_A 230 DTTYPAYVGPQEVPVP-----------------AMIASSDYYFSWLTWVTDERVCLQWLKRV-QNVSVLSICDFREDWQT 291 (719)
T ss_dssp ESSCHHHHCCEECCCC-----------------HHHHTSCEEEEEEEESSSSEEEEEEEESS-TTEEEEEEEEECSSSSS
T ss_pred ECCCCCccceeEccCC-----------------ccCCCCcceEEEeEEeCCCeEEEEEeccc-cCeEEEEEEcccCCCCC
Confidence 87776532 011000 00112445678999999987766643110 0112344555 221
Q ss_pred eeeecccCCCceec----CCcccceeeeeccceeeecCCCCCCCCccCCCcEEEE--EEcCC--cEEEEeCCCCceeEEE
Q psy15549 336 VFTRACLNKPAVCL----PSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIA--VATEN--NILLYDTQHASPFAFI 407 (621)
Q Consensus 336 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~dg--~i~iwd~~~~~~~~~~ 407 (621)
... ...+ ..+...+.. .....+.|+++++.++. ...+| .|++||+.+++ ...+
T Consensus 292 g~~-------~~~~~~~~~~~~~~~~~-----------~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~l 352 (719)
T 1z68_A 292 WDC-------PKTQEHIEESRTGWAGG-----------FFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQI 352 (719)
T ss_dssp EEC-------CGGGEEEEECSSSCSSS-----------SSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEEC
T ss_pred Cce-------EEEEecccccCCceEcc-----------ccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEec
Confidence 110 0111 122222220 00002234447775554 33444 68888887776 3344
Q ss_pred ecccccceEEEEEcCCCCeEEEEeCC-----CcEEEEEecC--CcC-CcccC----CCCCcccccCCCCCCCCcccC-CC
Q psy15549 408 ANIHYTKLTDITWSSDGKVLIASSTD-----GYCSIISFGD--NEI-GIPYV----PPSGEESKENDPTKGEPVRSE-DK 474 (621)
Q Consensus 408 ~~~h~~~v~~~~~spdg~~l~s~s~d-----g~i~iw~~~~--~~~-~~~~~----~~~~~~~~~~~~~~~~~~~s~-~~ 474 (621)
..+...+..+.++ +++.|+..+.+ +.+++|.+.. +.. ...+. .+........++++++.++.. +.
T Consensus 353 -t~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~ 430 (719)
T 1z68_A 353 -TSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYG 430 (719)
T ss_dssp -SCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECC
T ss_pred -ccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCC
Confidence 3355568888888 88888777665 8899999874 321 12222 233445566788888866532 22
Q ss_pred c--ccHHHhcc
Q psy15549 475 P--RSAEQAKG 483 (621)
Q Consensus 475 ~--~~~~~w~~ 483 (621)
+ ..+.+|+.
T Consensus 431 ~~~p~~~l~d~ 441 (719)
T 1z68_A 431 PGIPISTLHDG 441 (719)
T ss_dssp BSSCEEEEECS
T ss_pred CCCCeEEEEEC
Confidence 2 24455654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.85 E-value=8e-19 Score=174.14 Aligned_cols=238 Identities=10% Similarity=0.174 Sum_probs=158.8
Q ss_pred CCCCeEEEeccccccCCcceEEEEec--CCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGG--ADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~--~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
+......++|+|||+ +++++. .++.|. +|++..+.. .....+..+...+..++|
T Consensus 38 ~~~~p~~~a~spdg~-----l~~~~~~~~~~~v~--------------~~~~~~g~~-----~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-----LYSVDKEDDEGGIA--------------AWQIDGQTA-----HKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp ECSCCCCEEECTTCE-----EEEEEEETTEEEEE--------------EEEEETTEE-----EEEEEEEEESCCCSEEEE
T ss_pred ccCCcceEEEccCCe-----EEEEEecCCCceEE--------------EEEecCCcE-----EEeeeeecCCCCCEEEEE
Confidence 445788899999995 555553 368888 888865432 123334557778999999
Q ss_pred ccCCCEEEEEc--CCceEEEEeccCccccccceecccccc---------cCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy15549 90 SPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSR---------HQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 90 spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~---------h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~ 158 (621)
+|||++|++++ ++.+.+|++...+. ...+..+.. +...+.+++|+|+|+++++...++.|++|++
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~ 169 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGA----LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNV 169 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSC----EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCC----eeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEE
Confidence 99999888876 67799999964321 122222211 2235889999999996666677889999999
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeee-cCCCCCeEEEEECCCCCEEEE-EeCCCeEEEEECCC--CcE--EEEecc
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKIL-RGHLEDVYDISWSPTSTHLIS-GSVDNTAIMWDVHK--GKN--LGILTE 232 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~spd~~~l~s-~~~dg~i~vwd~~~--~~~--~~~~~~ 232 (621)
.....+. ....+ ......+..++|+|||++|++ +..++.|.+|++.. ++. +..+..
T Consensus 170 ~~~g~~~------------------~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 231 (347)
T 3hfq_A 170 SDAGQLS------------------EQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKT 231 (347)
T ss_dssp CTTSCEE------------------EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEES
T ss_pred CCCCcEE------------------EeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeee
Confidence 8322211 01111 123346788999999996666 45678999999874 443 222222
Q ss_pred CC------cceEEEEEcCCCCEEE-EEeCCCcEEEEEccCc---eeeeecccCCCCCCCccccccccccccccCCcccce
Q psy15549 233 HK------KFVQGVAWDPKNQYVA-TLSSDRSLRTYSIQSK---KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFF 302 (621)
Q Consensus 233 ~~------~~v~~l~~sp~~~~l~-s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 302 (621)
.. ..+..++|+|+|++|+ +...++.|.+|++... +.+..+.. ....+
T Consensus 232 ~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-----------------------~~~~~ 288 (347)
T 3hfq_A 232 IPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST-----------------------EGDFP 288 (347)
T ss_dssp SCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC-----------------------SSSCC
T ss_pred cCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec-----------------------CCCCc
Confidence 22 4588999999999875 4556899999999732 22222211 12234
Q ss_pred eeeeecCCCCeEEecc
Q psy15549 303 RRLTFSPDGQLLIAPS 318 (621)
Q Consensus 303 ~~~~~spdg~~l~~~s 318 (621)
..++|+|||++|++++
T Consensus 289 ~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 289 RDFDLDPTEAFVVVVN 304 (347)
T ss_dssp CEEEECTTSSEEEEEE
T ss_pred CeEEECCCCCEEEEEE
Confidence 7899999999887765
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-18 Score=172.39 Aligned_cols=260 Identities=11% Similarity=0.086 Sum_probs=170.3
Q ss_pred cCcEEEEEEccCCCEEEEEcCCceEEEEec-cCccccccceecccccccCCCeEEEEECCCCCE--EEEEe---------
Q psy15549 81 QKAVNVVRFSPNGELLASGDDVGKEIWYLT-ERESGIANVEFASDLSRHQKAVNVVRFSPNGEL--LASGD--------- 148 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~d~~v~iw~~~-~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~--l~s~s--------- 148 (621)
...+..++|+|+|++|++++.+.|.+|++. .+. +........+ +.+.+++|+|+|++ ++++.
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~-----~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTE-----IVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTE-----EEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCCcEEEECCCCCEEEEEccceEEEEEECCCCC-----EEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 346889999999999988885599999997 441 1111111111 23556899999994 55553
Q ss_pred ----CCCcEEEEEccC-CCCCCCCCCCCcccccccccceeeeeee-cCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEEC
Q psy15549 149 ----DESTIIVWKQKT-DQDLPEFPSSNLDEENVNKEHWIVTKIL-RGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDV 221 (621)
Q Consensus 149 ----~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~ 221 (621)
.++.+.+|++.. ++.... ...+ ..+...+.+++|+|||++|++++. ++.|++|++
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~------------------~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~ 174 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKN------------------VQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRK 174 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEE------------------EEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred eeecCCceEEEEccCCCCcCcce------------------EeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEE
Confidence 689999999974 332100 0111 135567999999999998887764 679999999
Q ss_pred C-CCcEE--EEec--cCCcceEEEEEcCCCCEEEEEeC-CCcEEEEEcc--Cceeee---ecccCCCCCCCccccccccc
Q psy15549 222 H-KGKNL--GILT--EHKKFVQGVAWDPKNQYVATLSS-DRSLRTYSIQ--SKKVIS---RACRSKLPVDSSHELFDKVV 290 (621)
Q Consensus 222 ~-~~~~~--~~~~--~~~~~v~~l~~sp~~~~l~s~~~-dg~i~iwd~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~ 290 (621)
. +++.. ..+. .|...+..++|+|+|++|++++. ++.|.+|++. +++... .+.......
T Consensus 175 ~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~----------- 243 (365)
T 1jof_A 175 LASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI----------- 243 (365)
T ss_dssp CTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC-----------
T ss_pred CCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc-----------
Confidence 8 67643 2333 23567899999999999988775 6899999875 454321 111000000
Q ss_pred cccccCCccc------ceeeee-ecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccc
Q psy15549 291 PLFHDDTMKS------FFRRLT-FSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCP 363 (621)
Q Consensus 291 ~~~~~~~~~~------~i~~~~-~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (621)
..+.. .+..++ |+|||++|+++... .+.
T Consensus 244 -----~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~---~~~------------------------------------- 278 (365)
T 1jof_A 244 -----PDRDPETGKGLYRADVCALTFSGKYMFASSRA---NKF------------------------------------- 278 (365)
T ss_dssp -----CCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE---SST-------------------------------------
T ss_pred -----CCcccccccccccccEEEECCCCCEEEEECCC---CCC-------------------------------------
Confidence 00011 457899 99999988765410 000
Q ss_pred eeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCC-CCceeEE--EecccccceEEEEEcC---CCCeEEEEeCC-CcE
Q psy15549 364 VLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQ-HASPFAF--IANIHYTKLTDITWSS---DGKVLIASSTD-GYC 436 (621)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~--~~~~h~~~v~~~~~sp---dg~~l~s~s~d-g~i 436 (621)
...+.|.+|++. +++.... ....+...+..++|+| ||++|++++.+ +.|
T Consensus 279 ------------------------~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v 334 (365)
T 1jof_A 279 ------------------------ELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWL 334 (365)
T ss_dssp ------------------------TSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEE
T ss_pred ------------------------CCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeE
Confidence 012478899886 5554331 1122445577899999 89999999864 899
Q ss_pred EEEEecCC
Q psy15549 437 SIISFGDN 444 (621)
Q Consensus 437 ~iw~~~~~ 444 (621)
.+|+++..
T Consensus 335 ~v~~~~~~ 342 (365)
T 1jof_A 335 EIYRWKDE 342 (365)
T ss_dssp EEEEEETT
T ss_pred EEEEEchh
Confidence 99999866
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.9e-19 Score=191.33 Aligned_cols=208 Identities=10% Similarity=-0.001 Sum_probs=146.7
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEe--cCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTG--GADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg--~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
....|...|..++|++++. +++.. +.++... ||.+..+.... .+..|...+.
T Consensus 18 ~~~~~~~~~~~~~~s~~~~-----~~~~~~~~~~~~~~--------------l~~~~~~~~~~-------~l~~~~~~~~ 71 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEV-----WWVAPRPAEAGRAT--------------LVRRRADGAEE-------SALPAPWNVR 71 (662)
T ss_dssp HHHHTCSCCEEEEEETTEE-----EEEEEETTTTTEEE--------------EEEECTTSCEE-------ESSCTTCCBC
T ss_pred HHhhcCCccceeEEcCCeE-----EEEecCcccCCcEE--------------EEEECCCCCcc-------eeCCCCcccc
Confidence 3456788999999999876 77777 6688888 77764332221 2445555554
Q ss_pred ---------EEEEc--cCCCE-EEEEcCCceEEEEeccC--c-cccccceecccccc-----cCCCeEEEEECCCCCEEE
Q psy15549 86 ---------VVRFS--PNGEL-LASGDDVGKEIWYLTER--E-SGIANVEFASDLSR-----HQKAVNVVRFSPNGELLA 145 (621)
Q Consensus 86 ---------~l~~s--pdg~~-las~~d~~v~iw~~~~~--~-~~~~~~~~~~~~~~-----h~~~V~~i~~sp~g~~l~ 145 (621)
...|+ |||+. |+.+++....||.+... + . . ...+.. |...+..++|+|||+.|+
T Consensus 72 ~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~-----~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~ 145 (662)
T 3azo_A 72 NRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGA-----V-PRPLTPVSAVGGGLRWADPVLLPERGEVW 145 (662)
T ss_dssp CCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCC-----C-CEECSCCCCSTTCEEEEEEEEETTTTEEE
T ss_pred ccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCC-----C-CEeccCCccCCCCccccCcEECCCCCEEE
Confidence 55565 99998 88877555566666543 1 1 1 122233 667889999999999999
Q ss_pred EEeCC----------CcEEEEEccC------CCCCCCCCCCCcccccccccceeeeeeec-CCCCCeEEEEECCCCCEEE
Q psy15549 146 SGDDE----------STIIVWKQKT------DQDLPEFPSSNLDEENVNKEHWIVTKILR-GHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 146 s~s~d----------g~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~~spd~~~l~ 208 (621)
+++.+ ..|++||+.+ +.. ..+. .+...+..++|+|||++|+
T Consensus 146 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------------~~l~~~~~~~~~~~~~SpDG~~la 203 (662)
T 3azo_A 146 CMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV----------------------RELSDDAHRFVTGPRLSPDGRQAV 203 (662)
T ss_dssp EEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS----------------------EESSCSCSSEECCCEECTTSSEEE
T ss_pred EEEecccCCCCCCceeEEEEEECCCCccccCCce----------------------eEEEecCCCcccCceECCCCCEEE
Confidence 98876 5899999987 332 3334 4556788899999999999
Q ss_pred EEeCC--------CeEEEEECC-CC---cEEEEeccCCcceEEEEEcCCCCEEEEEeCCC--cEEEEEccCceee
Q psy15549 209 SGSVD--------NTAIMWDVH-KG---KNLGILTEHKKFVQGVAWDPKNQYVATLSSDR--SLRTYSIQSKKVI 269 (621)
Q Consensus 209 s~~~d--------g~i~vwd~~-~~---~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg--~i~iwd~~~~~~~ 269 (621)
.++.+ ..|++||+. ++ +.......+...+..++|+|||++++++..++ .|.+||+.+++..
T Consensus 204 ~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~ 278 (662)
T 3azo_A 204 WLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAAT 278 (662)
T ss_dssp EEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEE
T ss_pred EEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCcee
Confidence 87754 379999998 56 44444445578899999999999777777788 5666666565543
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.7e-19 Score=176.80 Aligned_cols=289 Identities=11% Similarity=0.041 Sum_probs=186.6
Q ss_pred cccccCcEEE-----EEEccCCCEEEEEcC-Cc---eEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEE
Q psy15549 77 LSRHQKAVNV-----VRFSPNGELLASGDD-VG---KEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG 147 (621)
Q Consensus 77 ~~~h~~~V~~-----l~~spdg~~las~~d-~~---v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~ 147 (621)
+..|...+.. .+|||||++|+.+++ ++ +.+|++..+ .......++...+..++|+|+|+.|+++
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g-------~~~~lt~~~~~~~~~~~~spdg~~l~~~ 98 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ-------VATQLTEGRGDNTFGGFLSPDDDALFYV 98 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTC-------EEEECCCSSCBCSSSCEECTTSSEEEEE
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCC-------ceEEeeeCCCCCccceEEcCCCCEEEEE
Confidence 5556655555 889999999998873 33 666676655 3344444555555577899999999999
Q ss_pred eCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEE--EECCCCCEEEEEe--------------
Q psy15549 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI--SWSPTSTHLISGS-------------- 211 (621)
Q Consensus 148 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i--~~spd~~~l~s~~-------------- 211 (621)
+.++.|++||+.+++.. .....+...+... .++|++.+++...
T Consensus 99 ~~~~~l~~~d~~~g~~~---------------------~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~ 157 (388)
T 3pe7_A 99 KDGRNLMRVDLATLEEN---------------------VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKK 157 (388)
T ss_dssp ETTTEEEEEETTTCCEE---------------------EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHH
T ss_pred eCCCeEEEEECCCCcce---------------------eeeechhhcccccceeECCCCCeeccccccCcccccccccch
Confidence 99999999999988642 2333444444333 3489999887432
Q ss_pred --------CCCeEEEEECCCCcEEEEeccCCcceEEEEEcC-CCCEEEEEeCC------CcEEEEEccCceeeeecccCC
Q psy15549 212 --------VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP-KNQYVATLSSD------RSLRTYSIQSKKVISRACRSK 276 (621)
Q Consensus 212 --------~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp-~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~ 276 (621)
.+..|.+||+.+++... +..+...+..++|+| +|+.|+.+..+ ..|.++|+..+... .+...
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~- 234 (388)
T 3pe7_A 158 FHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTH- 234 (388)
T ss_dssp HHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCC-
T ss_pred hhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeC-
Confidence 34789999999887544 445667789999999 99999877763 36777787654432 22110
Q ss_pred CCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccce
Q psy15549 277 LPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYS 356 (621)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (621)
.....+..++|+|||+.|+..+.. +
T Consensus 235 --------------------~~~~~~~~~~~spdg~~l~~~~~~----~------------------------------- 259 (388)
T 3pe7_A 235 --------------------AEGESCTHEFWVPDGSALVYVSYL----K------------------------------- 259 (388)
T ss_dssp --------------------CTTEEEEEEEECTTSSCEEEEEEE----T-------------------------------
T ss_pred --------------------CCCcccccceECCCCCEEEEEecC----C-------------------------------
Confidence 001235678999999988765510 0
Q ss_pred eeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEe-ccccc---ceEEEEEcCCCCeEEEE--
Q psy15549 357 VAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIA-NIHYT---KLTDITWSSDGKVLIAS-- 430 (621)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~h~~---~v~~~~~spdg~~l~s~-- 430 (621)
+..+..|++||+.+++...... .++.. ....++|+|||+.|+..
T Consensus 260 ------------------------------~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 309 (388)
T 3pe7_A 260 ------------------------------GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQ 309 (388)
T ss_dssp ------------------------------TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-----
T ss_pred ------------------------------CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEee
Confidence 0012248899998887433221 11100 01224799999988854
Q ss_pred -------eCCCcEEEEEecCCcCCcccCCCCC-----------cccccCCCCCCCCcccC-CCcccHHHhc
Q psy15549 431 -------STDGYCSIISFGDNEIGIPYVPPSG-----------EESKENDPTKGEPVRSE-DKPRSAEQAK 482 (621)
Q Consensus 431 -------s~dg~i~iw~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~s~-~~~~~~~~w~ 482 (621)
..+..|++||+.++++. .+..+.. ......|+|+|+.++.. ..++...+|.
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 310 DDSGYKIENDPFLYVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYL 379 (388)
T ss_dssp -------CCCCEEEEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred eccccccCCCCEEEEEeccCCceE-EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEE
Confidence 45668999999988763 3333333 45667899999866644 3445444544
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-18 Score=172.17 Aligned_cols=294 Identities=6% Similarity=-0.043 Sum_probs=182.6
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccC-CCeEEEEECCCCCEEE-EEeCCCcEEEEEccCCC
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQ-KAVNVVRFSPNGELLA-SGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~i~~sp~g~~l~-s~s~dg~i~vwd~~~~~ 162 (621)
.+++++++.++++++ ++.|.+||...+ +....+..+. ..+..++|+|+|++++ ++..++.|.+||+.+++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD-------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 76 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT-------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC-------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc
Confidence 356788888888876 888999999876 3344443332 2577899999998665 55578999999998876
Q ss_pred CCCCCCCCCcccccccccceeeeeeec-CC-----CCCeEEEEECCCCCEEEEEeCC------------CeEEEEECCCC
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILR-GH-----LEDVYDISWSPTSTHLISGSVD------------NTAIMWDVHKG 224 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~v~~i~~spd~~~l~s~~~d------------g~i~vwd~~~~ 224 (621)
.. ..+. .+ ...+.+++|+|||++|++++.+ +.|.+||+.++
T Consensus 77 ~~---------------------~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 77 NT---------------------FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EE---------------------EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred EE---------------------EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 43 1222 12 2336789999999999998865 89999999885
Q ss_pred cE---EEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcc--
Q psy15549 225 KN---LGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMK-- 299 (621)
Q Consensus 225 ~~---~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 299 (621)
+. +..+. +...+.+++|+|+|+ +++++. .|.+||+.+++.+..+......... . ........+......
T Consensus 136 ~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 209 (349)
T 1jmx_B 136 LEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKG-Y-SAPDVLYFWPHQSPRHE 209 (349)
T ss_dssp GGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTT-B-CCCBCCCCCCCCCTTCE
T ss_pred cccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCcc-c-cCccceeeecCCCccee
Confidence 43 33333 334588999999999 655543 4999999998877655322110000 0 000000000000000
Q ss_pred -cceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCcc
Q psy15549 300 -SFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFK 378 (621)
Q Consensus 300 -~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (621)
.....+++++++....... ..
T Consensus 210 ~~~~~~~~~~~d~~~~~~~~-------------~~--------------------------------------------- 231 (349)
T 1jmx_B 210 FSMLYTIARFKDDKQDPATA-------------DL--------------------------------------------- 231 (349)
T ss_dssp EEEEEEEEEC-------CCC-------------EE---------------------------------------------
T ss_pred EEeeeeeeecCCCcCCcccc-------------cc---------------------------------------------
Confidence 0011122222221110000 00
Q ss_pred CCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcC-CCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcc
Q psy15549 379 LPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSS-DGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEE 457 (621)
Q Consensus 379 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~ 457 (621)
...++......+.+.+|+.. .+...+.+++|+| ||++|+++ ++.|.+||+.+++....+... ...
T Consensus 232 -~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~ 297 (349)
T 1jmx_B 232 -LYGYLSVDLKTGKTHTQEFA----------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTY 297 (349)
T ss_dssp -EEEEEEEETTTCCEEEEEEE----------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCC
T ss_pred -ceeEEEEeccCCcEEecccc----------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCc
Confidence 00111122234455555432 2455788999999 99999988 889999999998877666543 245
Q ss_pred cccCCCCCCCCcccCCCcccHHHhcccC
Q psy15549 458 SKENDPTKGEPVRSEDKPRSAEQAKGEG 485 (621)
Q Consensus 458 ~~~~~~~~~~~~~s~~~~~~~~~w~~~~ 485 (621)
..+.+++++..++....++.+.+|+...
T Consensus 298 ~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 298 YCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp CEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred cceEECCCCCEEEEecCCCeEEEEeccc
Confidence 5778999999888778889999999653
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-18 Score=188.44 Aligned_cols=151 Identities=12% Similarity=0.149 Sum_probs=113.0
Q ss_pred CcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCC-----CeEEEEECCCCCEEEEEeCC------
Q psy15549 82 KAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQK-----AVNVVRFSPNGELLASGDDE------ 150 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-----~V~~i~~sp~g~~l~s~s~d------ 150 (621)
....+++|+|||++|+++ ++.|++|++.++. ....+.+|.. ....++|||||++|++++.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ-ENNILVFNAEYGN-------SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRH 88 (740)
T ss_dssp CCCCCEEECSSSEEEEEE-TTEEEEEETTTCC-------EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSS
T ss_pred ccccccEECCCCcEEEEc-CCcEEEEECCCCc-------eEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEE
Confidence 346689999999999997 8999999998873 2333444442 23458899999999998876
Q ss_pred ---CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Q psy15549 151 ---STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL 227 (621)
Q Consensus 151 ---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~ 227 (621)
+.+.+||+.+++.. .+..|...+..++|||||+.||.+. ++.|++|++.+++..
T Consensus 89 ~~~~~~~~~d~~~~~~~----------------------~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQLI----------------------TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSY 145 (740)
T ss_dssp CEEEEEEEEETTTTEEC----------------------CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCE
T ss_pred ccceEEEEEECCCCcEE----------------------EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceE
Confidence 56779999988642 3456777899999999999999885 789999999888755
Q ss_pred EEec-cCCcce-----------------EEEEEcCCCCEEEEEeCCCc-EEEEEc
Q psy15549 228 GILT-EHKKFV-----------------QGVAWDPKNQYVATLSSDRS-LRTYSI 263 (621)
Q Consensus 228 ~~~~-~~~~~v-----------------~~l~~sp~~~~l~s~~~dg~-i~iwd~ 263 (621)
+... ++...+ ..+.|||||++|+.++.|.. +.+|++
T Consensus 146 ~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~ 200 (740)
T 4a5s_A 146 RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY 200 (740)
T ss_dssp ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEE
Confidence 4322 222222 35899999999998876543 666655
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=175.23 Aligned_cols=291 Identities=11% Similarity=0.062 Sum_probs=179.8
Q ss_pred CeEEEeccccccCCcceEEEEecC-CceEEeeeccCccccccceeEEeccccccccceeeccccccccCc-EEEEEEccC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGA-DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA-VNVVRFSPN 92 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~-dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~-V~~l~~spd 92 (621)
.+.+++|+|||+ +|+.... ++...+| +|++.+++... +..+... ...+.|+||
T Consensus 37 ~~~~~~~SpdG~-----~l~~~~~~~g~~~l~------------~~d~~~~~~~~--------l~~~~~~~~~~~~~spd 91 (396)
T 3c5m_A 37 YFYQKCFTQDGK-----KLLFAGDFDGNRNYY------------LLNLETQQAVQ--------LTEGKGDNTFGGFISTD 91 (396)
T ss_dssp CTTSCCBCTTSC-----EEEEEECTTSSCEEE------------EEETTTTEEEE--------CCCSSCBCTTTCEECTT
T ss_pred eeecCcCCCCCC-----EEEEEEecCCCceEE------------EEECCCCcEEE--------eecCCCCccccceECCC
Confidence 378899999998 7766543 4433333 77776654321 2222223 334789999
Q ss_pred CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEE-------------------EEECCCCCEEEEE-----
Q psy15549 93 GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNV-------------------VRFSPNGELLASG----- 147 (621)
Q Consensus 93 g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~-------------------i~~sp~g~~l~s~----- 147 (621)
|++|+.++ ++.+.+|++..+. .......+...... +.|+|+++.++.+
T Consensus 92 g~~l~~~~~~~~l~~~d~~~~~-------~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 92 ERAFFYVKNELNLMKVDLETLE-------EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp SSEEEEEETTTEEEEEETTTCC-------EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred CCEEEEEEcCCcEEEEECCCCC-------cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 99998877 6679999987652 11112222222212 3567777766654
Q ss_pred eCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEeCC------CeEEEEE
Q psy15549 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGSVD------NTAIMWD 220 (621)
Q Consensus 148 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~~d------g~i~vwd 220 (621)
..+..|.+||+.+++. ..+..+...+..+.|+| ++..|+..+.+ ..|.+||
T Consensus 165 ~~~~~l~~~d~~~g~~----------------------~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d 222 (396)
T 3c5m_A 165 NPTCRLIKVDIETGEL----------------------EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVN 222 (396)
T ss_dssp CCCEEEEEEETTTCCE----------------------EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEE
T ss_pred CCcceEEEEECCCCcE----------------------EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEE
Confidence 3566899999887653 22334667789999999 88877776643 4688999
Q ss_pred CCCCcEEEEeccC--CcceEEEEEcCCCCEEEEEeCC-----CcEEEEEccCceeeeecccCCCCCCCcccccccccccc
Q psy15549 221 VHKGKNLGILTEH--KKFVQGVAWDPKNQYVATLSSD-----RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLF 293 (621)
Q Consensus 221 ~~~~~~~~~~~~~--~~~v~~l~~sp~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (621)
+..++.. .+..+ ...+..++|+|+|++|+.++.+ +.|++||+.+++.......
T Consensus 223 ~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~------------------- 282 (396)
T 3c5m_A 223 EDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM------------------- 282 (396)
T ss_dssp TTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC-------------------
T ss_pred CCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC-------------------
Confidence 8766543 33333 2357889999999988777654 4499999988764332110
Q ss_pred ccCCcccceeeeeecC-CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCC
Q psy15549 294 HDDTMKSFFRRLTFSP-DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSD 372 (621)
Q Consensus 294 ~~~~~~~~i~~~~~sp-dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (621)
. ... +.|+| ||+++++++. +..+ ...
T Consensus 283 -----~-~~~-~~~s~~dg~~l~~~~~-----~~p~---~~~-------------------------------------- 309 (396)
T 3c5m_A 283 -----P-PCS-HLMSNFDGSLMVGDGC-----DAPV---DVA-------------------------------------- 309 (396)
T ss_dssp -----C-SEE-EEEECSSSSEEEEEEC-----CC----------------------------------------------
T ss_pred -----C-CCC-CCccCCCCceEEEecC-----Ccce---eec--------------------------------------
Confidence 0 012 78999 9998876541 1000 000
Q ss_pred CCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEeccccc-----------ceEEEEEcCCCCeEEEEeC-CCcEEEEE
Q psy15549 373 DKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYT-----------KLTDITWSSDGKVLIASST-DGYCSIIS 440 (621)
Q Consensus 373 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~-----------~v~~~~~spdg~~l~s~s~-dg~i~iw~ 440 (621)
+++ ......+..|++||+.+++... +.. +.. .+..++|+|||+.|+.++. ++...||.
T Consensus 310 -------~~~-~~~~~~~~~i~~~d~~~~~~~~-l~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 310 -------DAD-SYNIENDPFLYVLNTKAKSAQK-LCK-HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI 379 (396)
T ss_dssp -------------CCCCCCEEEEEETTTTBCCE-EEE-CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred -------ccc-ccccCCCCcEEEEecccCceEE-ccC-CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence 000 0000135689999998877543 322 333 2567899999998887764 56666666
Q ss_pred ec
Q psy15549 441 FG 442 (621)
Q Consensus 441 ~~ 442 (621)
++
T Consensus 380 ~~ 381 (396)
T 3c5m_A 380 AD 381 (396)
T ss_dssp EE
T ss_pred EE
Confidence 55
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-16 Score=156.91 Aligned_cols=258 Identities=12% Similarity=0.136 Sum_probs=182.5
Q ss_pred cCcEEEEEEccCCCEEEEEcCC-------------------------ceEEEEeccCccccccceecccc-cccCCCeEE
Q psy15549 81 QKAVNVVRFSPNGELLASGDDV-------------------------GKEIWYLTERESGIANVEFASDL-SRHQKAVNV 134 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~d~-------------------------~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~ 134 (621)
-+.+.+++++|+|+++++...+ .|.+|+...+ .....+ .++-.....
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g-------~~~~~~~~~~~~~p~g 95 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA-------EILQSSGKNLFYLPHG 95 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC-------CEEEEECTTTCSSEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC-------eEEeccCCCccCCceE
Confidence 4679999999999999888744 5888887655 222222 234457899
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEccCCC-CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC-CCCEEEEEe-
Q psy15549 135 VRFSPNGELLASGDDESTIIVWKQKTDQ-DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHLISGS- 211 (621)
Q Consensus 135 i~~sp~g~~l~s~s~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l~s~~- 211 (621)
++++|+|+++++...++.|++|+..... .+..+..... ...-.++......++++| ++.++++.+
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~------------~g~~~~~~~~P~~ia~~~~~g~lyv~d~~ 163 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ------------PGSDQNHFCQPTDVAVEPSTGAVFVSDGY 163 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTB------------CCCSTTCCSSEEEEEECTTTCCEEEEECS
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCC------------CCCCccccCCCcEEEEeCCCCeEEEEeCC
Confidence 9999999988888889999999976542 2211100000 000024455789999999 788888876
Q ss_pred CCCeEEEEECCCCcEEEEeccC----------CcceEEEEEcCC-CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCC
Q psy15549 212 VDNTAIMWDVHKGKNLGILTEH----------KKFVQGVAWDPK-NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVD 280 (621)
Q Consensus 212 ~dg~i~vwd~~~~~~~~~~~~~----------~~~v~~l~~sp~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 280 (621)
.++.|++|+ .++..+..+... ......++++|+ +.++++...++.|++|+..+++.+..+...
T Consensus 164 ~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~----- 237 (329)
T 3fvz_A 164 CNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA----- 237 (329)
T ss_dssp SCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT-----
T ss_pred CCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc-----
Confidence 689999999 577777766422 234789999998 666667777889999999888877766321
Q ss_pred CccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeee
Q psy15549 281 SSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVK 360 (621)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (621)
.....+..++|+| +..++..+
T Consensus 238 ----------------~~~~~~~~~~~~p-g~~~~~~g------------------------------------------ 258 (329)
T 3fvz_A 238 ----------------SFGRNVFAISYIP-GFLFAVNG------------------------------------------ 258 (329)
T ss_dssp ----------------TTTTCEEEEEEET-TEEEEEEC------------------------------------------
T ss_pred ----------------ccCCCcceeeecC-CEEEEeCC------------------------------------------
Confidence 1223456788888 43333221
Q ss_pred ccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEe--cccccceEEEEEcCCCCeEEEEeCCCcEEE
Q psy15549 361 CCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIA--NIHYTKLTDITWSSDGKVLIASSTDGYCSI 438 (621)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~h~~~v~~~~~spdg~~l~s~s~dg~i~i 438 (621)
..+++...+..|++||..+++.+..+. .++...+.+|+++|+|..+++...++.|++
T Consensus 259 ---------------------~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~ 317 (329)
T 3fvz_A 259 ---------------------KPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWK 317 (329)
T ss_dssp ---------------------CCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEE
T ss_pred ---------------------CEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEE
Confidence 111112245789999999999888763 246677999999999988888889999999
Q ss_pred EEecC
Q psy15549 439 ISFGD 443 (621)
Q Consensus 439 w~~~~ 443 (621)
|++..
T Consensus 318 ~~~~~ 322 (329)
T 3fvz_A 318 FTLTE 322 (329)
T ss_dssp EEEEE
T ss_pred EeCCc
Confidence 99875
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-17 Score=164.45 Aligned_cols=299 Identities=12% Similarity=0.048 Sum_probs=187.0
Q ss_pred CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe----------CCCcEEEEEccCCCCCCCCCCC
Q psy15549 101 DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD----------DESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 101 d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s----------~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
++.|.+||...+ +....+..+..+ .++|+|+|++|+++. .++.|.+||+.+.+.+..+
T Consensus 30 d~~v~v~D~~t~-------~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i--- 97 (361)
T 2oiz_A 30 ESRVHVYDYTNG-------KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEI--- 97 (361)
T ss_dssp GCEEEEEETTTC-------CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEE---
T ss_pred cCeEEEEECCCC-------eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEE---
Confidence 568899997765 334455555444 899999999999886 3668999999877654222
Q ss_pred Ccccccccccceeeeeeec---CCCCCeEEEEECCCCCEEEEEeC--CCeEEEEECCCCcEEEE-eccCCcceEEEEEcC
Q psy15549 171 NLDEENVNKEHWIVTKILR---GHLEDVYDISWSPTSTHLISGSV--DNTAIMWDVHKGKNLGI-LTEHKKFVQGVAWDP 244 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~---~~~~~v~~i~~spd~~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~v~~l~~sp 244 (621)
.... .+......++|+|||++|+++.. ++.|.+||+.+++.+.. +.. .+ ...+.+.|
T Consensus 98 ---------------~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~v~~~p 160 (361)
T 2oiz_A 98 ---------------SLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AG-CWSVIPQP 160 (361)
T ss_dssp ---------------EECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TT-EEEEEECT
T ss_pred ---------------EcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CC-cceeEEcC
Confidence 1110 12345678999999999998874 57999999999988877 543 22 23356778
Q ss_pred CC-CEEEEEeCCCcEEEEEccC-ceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 245 KN-QYVATLSSDRSLRTYSIQS-KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 245 ~~-~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
++ ..+++.+.||.+.+|++.. ++........ . .+.... ....+.+++++..++..+
T Consensus 161 ~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~--~-------------~~~~~~---~~~~~~~~~~g~~~~~~~---- 218 (361)
T 2oiz_A 161 NRPRSFMTICGDGGLLTINLGEDGKVASQSRSK--Q-------------MFSVKD---DPIFIAPALDKDKAHFVS---- 218 (361)
T ss_dssp TSSSEEEEEETTSSEEEEEECTTSSEEEEEECC--C-------------CSCTTT---SCBCSCCEECSSEEEEEB----
T ss_pred CCCeeEEEECCCCcEEEEEECCCCcEeeecccc--c-------------eEcCCC---CceEEEecccCCEEEEEe----
Confidence 76 6778889999999999865 4443221100 0 000000 012334466666666555
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCC-CCCccCCCcEEEEEEc-----------C
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDD-KPLFKLPYRIVIAVAT-----------E 390 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~-----------d 390 (621)
.++.+.+++....... ......-.........+.| .+. ...+.++++.++++.. .
T Consensus 219 -~~~~v~v~d~~~~~~~-----~~~~~~~~~~~~~~~~~~p-------~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~ 285 (361)
T 2oiz_A 219 -YYGNVYSADFSGDEVK-----VDGPWSLLNDEDKAKNWVP-------GGYNLVGLHRASGRMYVFMHPDGKEGTHKFPA 285 (361)
T ss_dssp -TTSEEEEEECSSSSCE-----EEEEEESCCHHHHHTTCEE-------CCSSCEEEETTTTEEEEEEESSCCTTCTTCCC
T ss_pred -CCCeEEEEEecCCCce-----ecccccccCcccccccccc-------CCeeEEEEecCCCeEEEEEccCCCcccccCCC
Confidence 4555666654210000 0000000000000000111 000 1123335566666543 3
Q ss_pred CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC--cCCcccCCCCCcccccCCCCCCC
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN--EIGIPYVPPSGEESKENDPTKGE 467 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 467 (621)
+.|.+||+.+++.+..+.. +. +.+++|+|||++|++++. +.|.+||..++ +.+..+.........+.++|+|.
T Consensus 286 ~~v~viD~~t~~~v~~i~~-~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPG-RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SEEEEEETTTTEEEEEEEC-TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred ceEEEEECCCCcEEEEEec-CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 4899999999999998865 43 899999999999998887 99999999999 88777655555556667777764
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.6e-17 Score=163.20 Aligned_cols=250 Identities=9% Similarity=0.049 Sum_probs=163.5
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEec-cccccccceeeccccccccCcEEEEEEcc
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLT-ERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~-~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
...+..++|+||++ +|++++.+ .|. +|++. +++.... .....+ +.+.+++|+|
T Consensus 39 ~~~~~~~a~spdg~-----~l~~~~~~-~v~--------------~~~~~~~g~~~~~-----~~~~~~-g~~~~~~~sp 92 (365)
T 1jof_A 39 DEPISWMTFDHERK-----NIYGAAMK-KWS--------------SFAVKSPTEIVHE-----ASHPIG-GHPRANDADT 92 (365)
T ss_dssp TCCCSEEEECTTSS-----EEEEEEBT-EEE--------------EEEEEETTEEEEE-----EEEECC-SSGGGGCTTS
T ss_pred CCCCcEEEECCCCC-----EEEEEccc-eEE--------------EEEECCCCCEEEe-----eEeecC-CCCccEEECC
Confidence 34688999999998 89888887 788 88876 4432110 011111 2355689999
Q ss_pred CCCE--EEEE--------------cCCceEEEEeccCccccccceeccccc-ccCCCeEEEEECCCCCEEEEEeC-CCcE
Q psy15549 92 NGEL--LASG--------------DDVGKEIWYLTERESGIANVEFASDLS-RHQKAVNVVRFSPNGELLASGDD-ESTI 153 (621)
Q Consensus 92 dg~~--las~--------------~d~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~i~~sp~g~~l~s~s~-dg~i 153 (621)
||++ ++++ .++.+.+|++...+... ..+..+. .+...+.+++|+|+|++|+++.. ++.|
T Consensus 93 dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v 169 (365)
T 1jof_A 93 NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLE---KNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKL 169 (365)
T ss_dssp CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEE---EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCc---ceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEE
Confidence 9994 4444 36679999997432110 1111111 24567899999999998887764 6799
Q ss_pred EEEEcc-CCCCCCCCCCCCcccccccccceeeeeeec--CCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECC--CCcEE
Q psy15549 154 IVWKQK-TDQDLPEFPSSNLDEENVNKEHWIVTKILR--GHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVH--KGKNL 227 (621)
Q Consensus 154 ~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~--~~~~~ 227 (621)
++|++. +++.. ....+. .|...+..++|+|||++|++++. ++.|.+|++. +++..
T Consensus 170 ~~~~~~~~g~~~-------------------~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 170 WTHRKLASGEVE-------------------LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPV 230 (365)
T ss_dssp EEEEECTTSCEE-------------------EEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEEECCCCCEE-------------------EeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEE
Confidence 999998 55421 011222 24567999999999999988775 6899999875 46542
Q ss_pred ---EEe---cc----CCc------ceEEEE-EcCCCCEEEEEeCCC------cEEEEEcc-CceeeeecccCCCCCCCcc
Q psy15549 228 ---GIL---TE----HKK------FVQGVA-WDPKNQYVATLSSDR------SLRTYSIQ-SKKVISRACRSKLPVDSSH 283 (621)
Q Consensus 228 ---~~~---~~----~~~------~v~~l~-~sp~~~~l~s~~~dg------~i~iwd~~-~~~~~~~~~~~~~~~~~~~ 283 (621)
..+ .. |.. .+..++ |+|||++|+++..+. .|.+|++. +++........
T Consensus 231 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~-------- 302 (365)
T 1jof_A 231 YTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLS-------- 302 (365)
T ss_dssp EEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEE--------
T ss_pred EccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeee--------
Confidence 122 11 122 578999 999999988776432 89999996 55543211000
Q ss_pred ccccccccccccCCcccceeeeeecC---CCCeEEeccccccCCCCCCcceeee
Q psy15549 284 ELFDKVVPLFHDDTMKSFFRRLTFSP---DGQLLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~i~~~~~sp---dg~~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
.........++|+| ||++|++++. .++.+.+|++.
T Consensus 303 ------------~~~~~~~~~~a~sp~~~dg~~l~v~~~----~~~~v~v~~~~ 340 (365)
T 1jof_A 303 ------------PTPTSGGHSNAVSPCPWSDEWMAITDD----QEGWLEIYRWK 340 (365)
T ss_dssp ------------ECSSCCTTCCCEEECTTCTTEEEEECS----SSCEEEEEEEE
T ss_pred ------------ecCCCCcccceecCCCcCCCEEEEEEc----CCCeEEEEEEc
Confidence 00111236789999 8999998872 34788999875
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-17 Score=169.11 Aligned_cols=269 Identities=12% Similarity=0.058 Sum_probs=172.3
Q ss_pred CcEEEEEEccCCCEEEEEcC--C--ceEEEEeccCccccccceecccccccCCC-eEEEEECCCCCEEEEEeCCCcEEEE
Q psy15549 82 KAVNVVRFSPNGELLASGDD--V--GKEIWYLTERESGIANVEFASDLSRHQKA-VNVVRFSPNGELLASGDDESTIIVW 156 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d--~--~v~iw~~~~~~~~~~~~~~~~~~~~h~~~-V~~i~~sp~g~~l~s~s~dg~i~vw 156 (621)
..+.+++|||||++|+...+ + .+.+|++..+ .... +..+... ...+.|+|+|++|+.++.++.|++|
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~-------~~~~-l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~ 107 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ-------QAVQ-LTEGKGDNTFGGFISTDERAFFYVKNELNLMKV 107 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT-------EEEE-CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEE
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCC-------cEEE-eecCCCCccccceECCCCCEEEEEEcCCcEEEE
Confidence 34778899999999887752 2 4666676654 2222 2222223 3347899999999999999999999
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEE-------------------EEECCCCCEEEEE-----eC
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYD-------------------ISWSPTSTHLISG-----SV 212 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------i~~spd~~~l~s~-----~~ 212 (621)
|+.+++... ....+...... +.|+|+++.++.+ ..
T Consensus 108 d~~~~~~~~---------------------~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 108 DLETLEEQV---------------------IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp ETTTCCEEE---------------------EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred ECCCCCcEE---------------------EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 998876321 11111111111 3578888877654 35
Q ss_pred CCeEEEEECCCCcEEEEeccCCcceEEEEEcC-CCCEEEEEeCC------CcEEEEEccCceeeeecccCCCCCCCcccc
Q psy15549 213 DNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP-KNQYVATLSSD------RSLRTYSIQSKKVISRACRSKLPVDSSHEL 285 (621)
Q Consensus 213 dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp-~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 285 (621)
+..|++||+.+++..... .+...+..+.|+| ++..|+.++.+ ..|.+||+..++...... .
T Consensus 167 ~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~---------- 234 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-H---------- 234 (396)
T ss_dssp CEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-C----------
T ss_pred cceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-c----------
Confidence 678999999988765544 4667789999999 78877776653 358888876554222111 0
Q ss_pred ccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeecccee
Q psy15549 286 FDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVL 365 (621)
Q Consensus 286 ~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (621)
.....+..++|+|||++|+.++. +.
T Consensus 235 -----------~~~~~~~~~~~spdg~~l~~~~~-----~~--------------------------------------- 259 (396)
T 3c5m_A 235 -----------AEGESCTHEFWIPDGSAMAYVSY-----FK--------------------------------------- 259 (396)
T ss_dssp -----------CTTEEEEEEEECTTSSCEEEEEE-----ET---------------------------------------
T ss_pred -----------CCCccccceEECCCCCEEEEEec-----CC---------------------------------------
Confidence 00123577899999998877551 00
Q ss_pred eecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcC-CCCeEEEEe-------------
Q psy15549 366 FELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSS-DGKVLIASS------------- 431 (621)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~s------------- 431 (621)
. ...+.|++||+.+++....... . ... ++|+| ||++|++++
T Consensus 260 ----------------~-----~~~~~l~~~d~~~g~~~~l~~~-~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 260 ----------------G-----QTDRVIYKANPETLENEEVMVM-P--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp ----------------T-----TCCEEEEEECTTTCCEEEEEEC-C--SEE-EEEECSSSSEEEEEECCC----------
T ss_pred ----------------C-----CccceEEEEECCCCCeEEeeeC-C--CCC-CCccCCCCceEEEecCCcceeecccccc
Confidence 0 0124589999988865443311 1 233 89999 999888765
Q ss_pred ---CCCcEEEEEecCCcCCcccCCCCC-----------cccccCCCCCCCCcccC
Q psy15549 432 ---TDGYCSIISFGDNEIGIPYVPPSG-----------EESKENDPTKGEPVRSE 472 (621)
Q Consensus 432 ---~dg~i~iw~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~s~ 472 (621)
.++.|++||+.+++.. .+..+.. ......++++|+.++..
T Consensus 315 ~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 368 (396)
T 3c5m_A 315 NIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFT 368 (396)
T ss_dssp CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEE
T ss_pred ccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEE
Confidence 3478999999888753 3333322 13445678888766544
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-17 Score=176.82 Aligned_cols=268 Identities=11% Similarity=0.047 Sum_probs=175.9
Q ss_pred ccccccCcEEEEEEccCCCEEEEE--c-CCceEEEEeccCccccccceecccccccCCCeE---------EEEEC--CCC
Q psy15549 76 DLSRHQKAVNVVRFSPNGELLASG--D-DVGKEIWYLTERESGIANVEFASDLSRHQKAVN---------VVRFS--PNG 141 (621)
Q Consensus 76 ~~~~h~~~V~~l~~spdg~~las~--~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~---------~i~~s--p~g 141 (621)
.+.+|...|..++|++++.+++.. + ++...||....++ ....+..|...+. .+.|+ |||
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg 90 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADG-------AEESALPAPWNVRNRVFEYSGFPWAGVPRPAG 90 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTS-------CEEESSCTTCCBCCCGGGTCCCCEEEECCSSS
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCC-------CcceeCCCCccccccccccCCccceeeeecCC
Confidence 467899999999999887777776 3 5668899874432 2334445555555 56565 999
Q ss_pred CE-EEEEeC-CCcEEEEEcc--C-CCCCCCCCCCCcccccccccceeeeeeecC-----CCCCeEEEEECCCCCEEEEEe
Q psy15549 142 EL-LASGDD-ESTIIVWKQK--T-DQDLPEFPSSNLDEENVNKEHWIVTKILRG-----HLEDVYDISWSPTSTHLISGS 211 (621)
Q Consensus 142 ~~-l~s~s~-dg~i~vwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~i~~spd~~~l~s~~ 211 (621)
+. |+.++. +..|.+|++. . +.. ..+.. |...+..++|+|||+.|++++
T Consensus 91 ~~~la~~~~~~~~l~~~~~~~~g~~~~----------------------~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~ 148 (662)
T 3azo_A 91 GPLLVFTHFGDQRLYAFEPDAPGGAVP----------------------RPLTPVSAVGGGLRWADPVLLPERGEVWCMA 148 (662)
T ss_dssp SCEEEEEBTTTCCEEEECTTSTTCCCC----------------------EECSCCCCSTTCEEEEEEEEETTTTEEEEEE
T ss_pred CeEEEEEECCCCeEEEEcCCCCCCCCC----------------------EeccCCccCCCCccccCcEECCCCCEEEEEE
Confidence 98 776654 5566666665 2 321 22333 566789999999999999988
Q ss_pred CC----------CeEEEEECCC------CcEEEEec-cCCcceEEEEEcCCCCEEEEEeCCC--------cEEEEEcc-C
Q psy15549 212 VD----------NTAIMWDVHK------GKNLGILT-EHKKFVQGVAWDPKNQYVATLSSDR--------SLRTYSIQ-S 265 (621)
Q Consensus 212 ~d----------g~i~vwd~~~------~~~~~~~~-~~~~~v~~l~~sp~~~~l~s~~~dg--------~i~iwd~~-~ 265 (621)
.+ ..|++||+.+ ++. ..+. .+...+..++|+|||++|+.++.++ .|++||+. +
T Consensus 149 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~ 227 (662)
T 3azo_A 149 EEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTED 227 (662)
T ss_dssp EEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTT
T ss_pred ecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCC
Confidence 76 5899999987 554 4555 5667788899999999999887553 79999998 5
Q ss_pred ce--eeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccC
Q psy15549 266 KK--VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLN 343 (621)
Q Consensus 266 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~ 343 (621)
+. ....+.. .+...+..++|+|||++++++. .++..
T Consensus 228 g~~~~~~~l~~----------------------~~~~~~~~~~~spdg~l~~~~~-----~~~~~--------------- 265 (662)
T 3azo_A 228 GRFADTRTLLG----------------------GPEEAIAQAEWAPDGSLIVATD-----RTGWW--------------- 265 (662)
T ss_dssp SCEEEEEEEEE----------------------ETTBCEEEEEECTTSCEEEEEC-----TTSSC---------------
T ss_pred CcccccEEeCC----------------------CCCceEcceEECCCCeEEEEEC-----CCCCe---------------
Confidence 61 2222211 1123467899999999554443 22211
Q ss_pred CCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccc--------e
Q psy15549 344 KPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTK--------L 415 (621)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~--------v 415 (621)
.|++||..+++..... ..+... +
T Consensus 266 ------------------------------------------------~l~~~~~~~~~~~~l~-~~~~~~~~p~w~~~~ 296 (662)
T 3azo_A 266 ------------------------------------------------NLHRVDPATGAATQLC-RREEEFAGPLWTPGM 296 (662)
T ss_dssp ------------------------------------------------EEEEECTTTCCEEESS-CCSSBSSCCCCSTTC
T ss_pred ------------------------------------------------EEEEEECCCCceeecc-cccccccCccccccC
Confidence 4555555444432222 222211 5
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEEec--CCcCCcccCCCCCcccccCCCCCCC
Q psy15549 416 TDITWSSDGKVLIASSTDGYCSIISFG--DNEIGIPYVPPSGEESKENDPTKGE 467 (621)
Q Consensus 416 ~~~~~spdg~~l~s~s~dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (621)
..++|+|+++++++++. +.++||.++ +++ ...+..+...+..+. ++++.
T Consensus 297 ~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~-s~~~~ 347 (662)
T 3azo_A 297 RWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATL-TVSGT 347 (662)
T ss_dssp CSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEE-EEETT
T ss_pred ceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEE-ecCCC
Confidence 67899999999999988 999999554 454 455655554444331 44444
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.73 E-value=4.8e-15 Score=142.40 Aligned_cols=242 Identities=14% Similarity=0.235 Sum_probs=167.8
Q ss_pred ccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccc------cccCCCeEEEEE-CCCCCEEEEEeC
Q psy15549 78 SRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDL------SRHQKAVNVVRF-SPNGELLASGDD 149 (621)
Q Consensus 78 ~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~------~~h~~~V~~i~~-sp~g~~l~s~s~ 149 (621)
.++-..+.+++++++|+++++.. ++.|.+|+.... ....+ .+|...+..+++ .+++.++++...
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~--------~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~ 97 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR--------FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS 97 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC--------EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCc--------EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC
Confidence 45667899999999999888866 778999987632 11112 234567899999 567776666643
Q ss_pred -CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeee-cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Q psy15549 150 -ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL-RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL 227 (621)
Q Consensus 150 -dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~ 227 (621)
++.|.+|| .+++.+ ..+ ..+...+.+++++|+|+++++...++.|.+||. +++.+
T Consensus 98 ~~~~i~~~d-~~g~~~---------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 154 (286)
T 1q7f_A 98 PTHQIQIYN-QYGQFV---------------------RKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVL 154 (286)
T ss_dssp GGCEEEEEC-TTSCEE---------------------EEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEE
T ss_pred CCCEEEEEC-CCCcEE---------------------EEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEE
Confidence 78999999 444422 222 234457899999999998888777899999996 46666
Q ss_pred EEec--cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeee
Q psy15549 228 GILT--EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL 305 (621)
Q Consensus 228 ~~~~--~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 305 (621)
..+. .+...+.+++++|+|+++++...++.|++||.. ++.+..+... .....+..+
T Consensus 155 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~---------------------g~~~~p~~i 212 (286)
T 1q7f_A 155 HKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGE---------------------GITNYPIGV 212 (286)
T ss_dssp EEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCT---------------------TTSCSEEEE
T ss_pred EEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccC---------------------CccCCCcEE
Confidence 5553 344568999999999987777778999999974 4444433211 001234678
Q ss_pred eecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEE
Q psy15549 306 TFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVI 385 (621)
Q Consensus 306 ~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 385 (621)
+++++|+++++..
T Consensus 213 ~~d~~G~l~v~~~------------------------------------------------------------------- 225 (286)
T 1q7f_A 213 GINSNGEILIADN------------------------------------------------------------------- 225 (286)
T ss_dssp EECTTCCEEEEEC-------------------------------------------------------------------
T ss_pred EECCCCCEEEEeC-------------------------------------------------------------------
Confidence 8888887665543
Q ss_pred EEEcCC-cEEEEeCCCCceeEEEecc-cccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 386 AVATEN-NILLYDTQHASPFAFIANI-HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 386 ~~~~dg-~i~iwd~~~~~~~~~~~~~-h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
.++ .|.+||. +++.+..+... ....+.+++++|+|+++++ +.|+.|++|++...
T Consensus 226 ---~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 226 ---HNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ---SSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred ---CCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 333 7888884 45555555331 2234789999999987776 67999999998653
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.9e-15 Score=147.46 Aligned_cols=194 Identities=10% Similarity=0.082 Sum_probs=137.7
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
..|.+++|++++. .++..+.++.++ .|. ... ...+..+...+.+++|+++|
T Consensus 6 ~~~~~~~~~~~~~-----~~~~~~~~~~~~--------------~~~---~~~-------~~~~~~~~~~~~~~~~~~~g 56 (333)
T 2dg1_A 6 QDLPTLFYSGKSN-----SAVPIISESELQ--------------TIT---AEP-------WLEISKKGLQLEGLNFDRQG 56 (333)
T ss_dssp CCCCBCCSCGGGG-----CSSCCCCGGGSC--------------EEE---CEE-------EEEEESSCCCEEEEEECTTS
T ss_pred cccceeeecCCcc-----ceeEEeecccCc--------------ccc---cce-------eEEEeccCccccCcEECCCC
Confidence 4688999999997 777778888888 772 111 12245566778999999999
Q ss_pred CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC----CcEEEEEccCCCCCCCCC
Q psy15549 94 ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE----STIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 94 ~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d----g~i~vwd~~~~~~~~~~~ 168 (621)
++++++. ++.|.+|+...+. .......+...+.+++|+++|+++++...+ +.|.+||..++...
T Consensus 57 ~l~~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~---- 125 (333)
T 2dg1_A 57 QLFLLDVFEGNIFKINPETKE-------IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ---- 125 (333)
T ss_dssp CEEEEETTTCEEEEECTTTCC-------EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE----
T ss_pred CEEEEECCCCEEEEEeCCCCc-------EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE----
Confidence 9887776 7779999877652 222222456789999999999988877766 68999998776531
Q ss_pred CCCcccccccccceeeeeee--cCCCCCeEEEEECCCCCEEEEEeC------CCeEEEEECCCCcEEEEeccCCcceEEE
Q psy15549 169 SSNLDEENVNKEHWIVTKIL--RGHLEDVYDISWSPTSTHLISGSV------DNTAIMWDVHKGKNLGILTEHKKFVQGV 240 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~spd~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~v~~l 240 (621)
..+ ..+...+.+++++|+|+++++... .+.|..||..+++... +..+...+..+
T Consensus 126 -----------------~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i 187 (333)
T 2dg1_A 126 -----------------DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGI 187 (333)
T ss_dssp -----------------EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEE
T ss_pred -----------------EEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccce
Confidence 111 124467899999999987776653 3567777765554433 22333457889
Q ss_pred EEcCCCCEEEEE-eCCCcEEEEEccC
Q psy15549 241 AWDPKNQYVATL-SSDRSLRTYSIQS 265 (621)
Q Consensus 241 ~~sp~~~~l~s~-~~dg~i~iwd~~~ 265 (621)
+|+|++++|+.+ +.++.|.+||+.+
T Consensus 188 ~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 188 ALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EECCCCCEEEEEeCCCCeEEEEEecC
Confidence 999999876554 4578999999864
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-15 Score=151.07 Aligned_cols=259 Identities=12% Similarity=0.097 Sum_probs=162.3
Q ss_pred CCeEEEeccccccCCcceEEEEec---------CCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGG---------ADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~---------~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
..+..+++ ||+ +++... .++.|. +|++.++... . + ..+
T Consensus 15 ~~~~~~~~--dG~-----~i~~~~~~~~~~~~~~~~~l~--------------~~d~~~~~~~-~-------l----~~~ 61 (347)
T 2gop_A 15 AYLSDPRT--KGE-----LVAYVLTKANLKDNKYENTIV--------------IENLKNNARR-F-------I----ENA 61 (347)
T ss_dssp CEEEEEEE--ETT-----EEEEEEEEEETTTTEEEEEEE--------------EEETTTCCEE-E-------E----ESC
T ss_pred EEcccceE--CCc-----EEEEEEeecCcccCCccceEE--------------EEeCCCCceE-E-------c----ccC
Confidence 46788888 887 776642 134455 8887765421 1 2 468
Q ss_pred EEEEEccCCCEEEEEc-C---Cc--eEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC--------
Q psy15549 85 NVVRFSPNGELLASGD-D---VG--KEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE-------- 150 (621)
Q Consensus 85 ~~l~~spdg~~las~~-d---~~--v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d-------- 150 (621)
.+++|||||++|+.++ + +. +.+|++..+ .... +..+.. +..++|+|+|+.|+.++.+
T Consensus 62 ~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g-------~~~~-l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~ 132 (347)
T 2gop_A 62 TMPRISPDGKKIAFMRANEEKKVSEIWVADLETL-------SSKK-ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFI 132 (347)
T ss_dssp EEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT-------EEEE-EEEESE-EEEEEECTTSSEEEEEEECCCC-----
T ss_pred CCeEECCCCCEEEEEEeccCCCcceEEEEECCCC-------ceEE-EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcE
Confidence 8999999999999876 2 33 455555543 2222 222333 8999999999998887642
Q ss_pred -------------------CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe
Q psy15549 151 -------------------STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS 211 (621)
Q Consensus 151 -------------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~ 211 (621)
..|.+||+.+++.+ ..+.. . .+..+.|+||| +++++.
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~---------------------~~l~~-~-~~~~~~~spdg-~~~~~~ 188 (347)
T 2gop_A 133 FEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI---------------------EEFEK-P-RFSSGIWHRDK-IVVNVP 188 (347)
T ss_dssp ----CCCC---------CEEEEEEEETTTTEEE---------------------EEEEE-E-TTCEEEEETTE-EEEEEE
T ss_pred EEcccceeecCcccccCccceEEEEECCCCeEE---------------------eeecC-C-CcccccCCCCe-EEEEEe
Confidence 46888898776531 12222 2 67899999999 777776
Q ss_pred CCC-------eEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCC--------cEEEEEccCceeeeecccCC
Q psy15549 212 VDN-------TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDR--------SLRTYSIQSKKVISRACRSK 276 (621)
Q Consensus 212 ~dg-------~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~~~ 276 (621)
.++ ...||.+.+++. ..+..+ ..+..+ +|+|++|+.++.++ .|.+|| +++......
T Consensus 189 ~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~--- 259 (347)
T 2gop_A 189 HREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD--- 259 (347)
T ss_dssp CCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST---
T ss_pred cccccccccccccEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc---
Confidence 542 344554445543 444444 555444 99999988877543 577777 443322111
Q ss_pred CCCCCccccccccccccccCCcccceee-eeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccc
Q psy15549 277 LPVDSSHELFDKVVPLFHDDTMKSFFRR-LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYY 355 (621)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (621)
.+...+.. +.|+ |+ ++++
T Consensus 260 --------------------~~~~~~~~~~~~s-dg-~~~~--------------------------------------- 278 (347)
T 2gop_A 260 --------------------EVDRGVGQAKIKD-GK-VYFT--------------------------------------- 278 (347)
T ss_dssp --------------------TCCSEEEEEEEET-TE-EEEE---------------------------------------
T ss_pred --------------------cCCcccCCccEEc-Cc-EEEE---------------------------------------
Confidence 11223443 6676 65 4333
Q ss_pred eeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCc
Q psy15549 356 SVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGY 435 (621)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~ 435 (621)
++.++.++|| +.+++... +.. +...|.+++|+| .++++++.++.
T Consensus 279 -------------------------------~~~~~~~~l~-~~~g~~~~-~~~-~~~~v~~~~~s~--~~~~~~~~~~~ 322 (347)
T 2gop_A 279 -------------------------------LFEEGSVNLY-IWDGEIKP-IAK-GRHWIMGFDVDE--IVVYLKETATR 322 (347)
T ss_dssp -------------------------------EEETTEEEEE-EESSSEEE-EEC-SSSEEEEEEESS--SEEEEEECSSS
T ss_pred -------------------------------EecCCcEEEE-EcCCceEE-Eec-CCCeEEeeeeeC--cEEEEEcCCCC
Confidence 3356677777 66555433 323 467899999999 67777777776
Q ss_pred E-EEEEecCCc
Q psy15549 436 C-SIISFGDNE 445 (621)
Q Consensus 436 i-~iw~~~~~~ 445 (621)
. .||.++ ++
T Consensus 323 ~~~l~~~~-g~ 332 (347)
T 2gop_A 323 LRELFTWD-GE 332 (347)
T ss_dssp CCEEEEES-SS
T ss_pred hHHheEeC-Cc
Confidence 5 888887 54
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.3e-15 Score=146.52 Aligned_cols=268 Identities=11% Similarity=0.037 Sum_probs=175.1
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCcccc----------ccceeEEeccccccccceeeccccccccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRL----------KTGKIWYLTERESGIANVEFASDLSRHQK 82 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~----------~~~~iw~~~~~~~~~~~~~~~~~~~~h~~ 82 (621)
-+.+.+|+++|+|+ ++++...++.+.++........ ..+.+||..++..... .-.++-.
T Consensus 23 l~~v~~va~d~~G~-----l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~------~~~~~~~ 91 (329)
T 3fvz_A 23 PGQVSGVALDSKNN-----LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQS------SGKNLFY 91 (329)
T ss_dssp CSCEEEEEECTTCC-----EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEE------ECTTTCS
T ss_pred cCCceEEEECCCCC-----EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEec------cCCCccC
Confidence 35799999999998 8888888854433222211111 1233777665543211 1124456
Q ss_pred cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccc---------cccCCCeEEEEECC-CCCEEEEEe-CC
Q psy15549 83 AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDL---------SRHQKAVNVVRFSP-NGELLASGD-DE 150 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~---------~~h~~~V~~i~~sp-~g~~l~s~s-~d 150 (621)
....++++|+|+++++.. ++.|++|+..... ..+..+ .++......++++| ++.++++.+ .+
T Consensus 92 ~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~------~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~ 165 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE------GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN 165 (329)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEECTTCSS------CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC
T ss_pred CceEEEECCCCCEEEEECCCCEEEEEeCCCCe------EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC
Confidence 789999999999888776 6788999875431 012222 23445789999999 788888876 68
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEE
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVHKGKNLGI 229 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~~~~ 229 (621)
+.|++|+. ++..+..+...... .....++-.....++++|+ +.++++...++.|++|+..+++.+..
T Consensus 166 ~~I~~~~~-~g~~~~~~~~~g~~-----------~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 166 SRIVQFSP-SGKFVTQWGEESSG-----------SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp CEEEEECT-TSCEEEEECEECCS-----------SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CeEEEEcC-CCCEEEEeccCCCC-----------CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 99999994 34332111000000 0000123345889999998 67777777789999999988998888
Q ss_pred ec--cCCcceEEEEEcCCCCEEEEE-------eCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCccc
Q psy15549 230 LT--EHKKFVQGVAWDPKNQYVATL-------SSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKS 300 (621)
Q Consensus 230 ~~--~~~~~v~~l~~sp~~~~l~s~-------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (621)
+. .+...+.+++|+| +..+++. ..+..|++|++.+++.+..+... .....
T Consensus 234 ~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~--------------------~~~~~ 292 (329)
T 3fvz_A 234 IKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPV--------------------RKHFD 292 (329)
T ss_dssp ECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCS--------------------SSCCS
T ss_pred EeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCC--------------------CCccC
Confidence 74 4556788999999 4333333 33458999999999887765311 11223
Q ss_pred ceeeeeecCCCCeEEeccccccCCCCCCcceeeee
Q psy15549 301 FFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTH 335 (621)
Q Consensus 301 ~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~ 335 (621)
...+++++|+|..+++.. .++.|+.|++..
T Consensus 293 ~p~~ia~~~dG~lyvad~-----~~~~I~~~~~~~ 322 (329)
T 3fvz_A 293 MPHDIVASEDGTVYIGDA-----HTNTVWKFTLTE 322 (329)
T ss_dssp SEEEEEECTTSEEEEEES-----SSCCEEEEEEEE
T ss_pred CeeEEEECCCCCEEEEEC-----CCCEEEEEeCCc
Confidence 457899999997666665 678888888753
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=6e-14 Score=146.24 Aligned_cols=340 Identities=15% Similarity=0.085 Sum_probs=207.9
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEec
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLT 110 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~ 110 (621)
++++...++.|. ++|..+++.... +. ....+..+.|+|||++|++++ ++.|.+||+.
T Consensus 169 ~~V~~~~~~~V~--------------viD~~t~~v~~~-------i~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 169 FSVTLRDAGQIA--------------LIDGSTYEIKTV-------LD-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp EEEEETTTTEEE--------------EEETTTCCEEEE-------EE-CSSCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred EEEEeCCCCeEE--------------EEECCCCeEEEE-------Ee-CCCCccceEECCCCCEEEEEcCCCeEEEEECC
Confidence 778888899999 777766543221 22 223567899999999998877 7789999985
Q ss_pred --cCccccccceecccccccCCCeEEEEEC----CCCCEEEEEeC-CCcEEEEEccCCCCCCCCCCCCccccccccccee
Q psy15549 111 --ERESGIANVEFASDLSRHQKAVNVVRFS----PNGELLASGDD-ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWI 183 (621)
Q Consensus 111 --~~~~~~~~~~~~~~~~~h~~~V~~i~~s----p~g~~l~s~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (621)
+. +.+..+.... ....++|+ |+|++++++.. +++|.|+|..+.+.+..++......
T Consensus 227 ~~t~-------~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~--------- 289 (567)
T 1qks_A 227 MKEP-------TTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTY--------- 289 (567)
T ss_dssp SSSC-------CEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECT---------
T ss_pred CCCC-------cEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccc---------
Confidence 33 3333443332 45789999 69998887664 5899999988877653331100000
Q ss_pred eeeeecCC-CCCeEEEEECCCCCEEE-EEeCCCeEEEEECCCCcEEE--EeccCCcceEEEEEcCCCCEEEEEe-CCCcE
Q psy15549 184 VTKILRGH-LEDVYDISWSPTSTHLI-SGSVDNTAIMWDVHKGKNLG--ILTEHKKFVQGVAWDPKNQYVATLS-SDRSL 258 (621)
Q Consensus 184 ~~~~~~~~-~~~v~~i~~spd~~~l~-s~~~dg~i~vwd~~~~~~~~--~~~~~~~~v~~l~~sp~~~~l~s~~-~dg~i 258 (621)
.....| ...+..+..++++..++ ....+|.|.++|..+.+.+. .+ ........+.|+|+|++|+++. .++.|
T Consensus 290 --~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V 366 (567)
T 1qks_A 290 --DEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKL 366 (567)
T ss_dssp --TTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEE
T ss_pred --ccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeE
Confidence 000012 22678899999866544 44557999999987754322 22 2334567889999999988766 47889
Q ss_pred EEEEccCceeeeeccc-CCCCCCCccccccccccccccCCcccceeeee-ecCCCCeEEeccccccCCCCCCcceeeeee
Q psy15549 259 RTYSIQSKKVISRACR-SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLT-FSPDGQLLIAPSGCLENSDSTRKPISVTHV 336 (621)
Q Consensus 259 ~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~spdg~~l~~~s~~~~~~d~~i~~~~~~~~ 336 (621)
.++|+.+++.+..+.. ...+ +.+ ..+. ++|++..+.+.+.. .++.+.+++....
T Consensus 367 ~ViD~~t~kl~~~i~vgg~~P-------------------hpg--~g~~~~~p~~g~v~~t~~~---g~~~Vsvid~~~~ 422 (567)
T 1qks_A 367 VVIDTKEGKLVAIEDTGGQTP-------------------HPG--RGANFVHPTFGPVWATSHM---GDDSVALIGTDPE 422 (567)
T ss_dssp EEEETTTTEEEEEEECSSSSB-------------------CCT--TCEEEEETTTEEEEEEEBS---SSSEEEEEECCTT
T ss_pred EEEECCCCcEEEEEeccCcCC-------------------CCc--cceeeECCCCCcEEEeCCC---CCCeEEEecCCCC
Confidence 9999999988776643 2211 111 1222 57875544433210 2456666664420
Q ss_pred eeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc-------CCcEEEEeCCCC-----cee
Q psy15549 337 FTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT-------ENNILLYDTQHA-----SPF 404 (621)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~-----~~~ 404 (621)
.....-...+..+.........+. +.++++++.+... .+.|.++|+.+. ...
T Consensus 423 ~~~~~~~kvv~~i~~~g~g~~~i~----------------~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~ 486 (567)
T 1qks_A 423 GHPDNAWKILDSFPALGGGSLFIK----------------THPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPE 486 (567)
T ss_dssp TCTTTBTSEEEEEECSCSCCCCEE----------------CCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCC
T ss_pred CCccccCEEEEEEecCCCCCEEEE----------------eCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCC
Confidence 000000111111111111001111 2335667776552 359999999876 222
Q ss_pred -EEEecc-------cccceEEEEEcCCCCeEEEEe-----CCCcEEEEEecCCcCCcccCCC
Q psy15549 405 -AFIANI-------HYTKLTDITWSSDGKVLIASS-----TDGYCSIISFGDNEIGIPYVPP 453 (621)
Q Consensus 405 -~~~~~~-------h~~~v~~~~~spdg~~l~s~s-----~dg~i~iw~~~~~~~~~~~~~~ 453 (621)
..+..+ ....+..+.|+|+|+++..+. .++.|.|+|..++++...+..+
T Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~ 548 (567)
T 1qks_A 487 FKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKDE 548 (567)
T ss_dssp EEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred cEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCCC
Confidence 333211 135789999999999877663 3799999999999887777653
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.69 E-value=3.1e-15 Score=148.38 Aligned_cols=288 Identities=8% Similarity=0.061 Sum_probs=177.8
Q ss_pred eEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc-----------CCceEEEEeccCccccccceeccccc
Q psy15549 58 IWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-----------DVGKEIWYLTERESGIANVEFASDLS 126 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-----------d~~v~iw~~~~~~~~~~~~~~~~~~~ 126 (621)
+||..+++.. ..+..+..+ .++|+|||++|+++. ++.|.+||.... +....+.
T Consensus 35 v~D~~t~~~~-------~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~-------~~~~~i~ 98 (361)
T 2oiz_A 35 VYDYTNGKFL-------GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL-------TFEKEIS 98 (361)
T ss_dssp EEETTTCCEE-------EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC-------CEEEEEE
T ss_pred EEECCCCeEE-------EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC-------cEEEEEE
Confidence 8877655432 224444444 899999999998874 455999998754 2233322
Q ss_pred c------cCCCeEEEEECCCCCEEEEEeC--CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeee-ecCCCCCeEE
Q psy15549 127 R------HQKAVNVVRFSPNGELLASGDD--ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI-LRGHLEDVYD 197 (621)
Q Consensus 127 ~------h~~~V~~i~~sp~g~~l~s~s~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~ 197 (621)
. +......++|+|+|++|+++.. +++|.+||+.+++.+ .. +. .. ....
T Consensus 99 ~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~---------------------~~~i~-~~-~~~~ 155 (361)
T 2oiz_A 99 LPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYV---------------------EDVTA-AA-GCWS 155 (361)
T ss_dssp ECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEE---------------------EEEGG-GT-TEEE
T ss_pred cCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEE---------------------EEEec-CC-Ccce
Confidence 1 2245678999999999998864 579999999988643 22 11 11 2233
Q ss_pred EEECCCC-CEEEEEeCCCeEEEEECCC-CcEEEE------eccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceee
Q psy15549 198 ISWSPTS-THLISGSVDNTAIMWDVHK-GKNLGI------LTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVI 269 (621)
Q Consensus 198 i~~spd~-~~l~s~~~dg~i~vwd~~~-~~~~~~------~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 269 (621)
+.+.|++ ..+++.+.||.+.+|++.. ++.... +..+..++ .+.+++++..++..+.++.|.++|+......
T Consensus 156 v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~ 234 (361)
T 2oiz_A 156 VIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVK 234 (361)
T ss_dssp EEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCE
T ss_pred eEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCce
Confidence 5677765 6778888899999999865 554421 22222222 3345677888888888999999998754321
Q ss_pred --eecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccc-cc-----cCCCCCCcceeeeeeeeecc
Q psy15549 270 --SRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSG-CL-----ENSDSTRKPISVTHVFTRAC 341 (621)
Q Consensus 270 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~-~~-----~~~d~~i~~~~~~~~~~~~~ 341 (621)
..+.... . ... ...........++|+|+++.++++.. .. ......+.+||.....
T Consensus 235 ~~~~~~~~~-----~-----~~~---~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~---- 297 (361)
T 2oiz_A 235 VDGPWSLLN-----D-----EDK---AKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ---- 297 (361)
T ss_dssp EEEEEESCC-----H-----HHH---HTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE----
T ss_pred ecccccccC-----c-----ccc---ccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc----
Confidence 1111000 0 000 00000011134789999988887642 00 0012356666654221
Q ss_pred cCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC--ceeEEEecccccceEEEE
Q psy15549 342 LNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA--SPFAFIANIHYTKLTDIT 419 (621)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~h~~~v~~~~ 419 (621)
....+..+. ...+.++| +++++++++. +.|.+||..++ +.+..+. .+......++
T Consensus 298 ---~v~~i~~~~--p~~ia~sp----------------dg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~-~~G~~P~~~~ 354 (361)
T 2oiz_A 298 ---RVARIPGRD--ALSMTIDQ----------------QRNLMLTLDG-GNVNVYDISQPEPKLLRTIE-GAAEASLQVQ 354 (361)
T ss_dssp ---EEEEEECTT--CCEEEEET----------------TTTEEEEECS-SCEEEEECSSSSCEEEEEET-TSCSSEEEEE
T ss_pred ---EEEEEecCC--eeEEEECC----------------CCCEEEEeCC-CeEEEEECCCCcceeeEEec-cCCCCcEEEE
Confidence 111222222 55555555 7788887776 99999999999 8888763 3667788999
Q ss_pred EcCCCC
Q psy15549 420 WSSDGK 425 (621)
Q Consensus 420 ~spdg~ 425 (621)
++|+|+
T Consensus 355 ~~p~G~ 360 (361)
T 2oiz_A 355 FHPVGG 360 (361)
T ss_dssp ECCCSC
T ss_pred ecCCCC
Confidence 999986
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-14 Score=158.21 Aligned_cols=249 Identities=10% Similarity=0.041 Sum_probs=165.5
Q ss_pred cccCcEEEEEEccCCCEEEEEc-CC-----ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 79 RHQKAVNVVRFSPNGELLASGD-DV-----GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~-d~-----~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
+|...+..++|||||++||.+. ++ .|++|++.++. ...... ....+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~-------~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~ 193 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK-------ELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQ 193 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE-------EEEEEE-EEECSCCEEECTTSSEEEEEECCCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC-------CCcccc-cCcccceEEEEeCCCEEEEEEECCc
Confidence 4555789999999999999765 22 68999998763 222111 1123667999999999999887765
Q ss_pred ----------------EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC----
Q psy15549 153 ----------------IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV---- 212 (621)
Q Consensus 153 ----------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~---- 212 (621)
|++|++.++..... +......|...+..+.|+|||++|+.++.
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~-----------------~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 256 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDI-----------------LCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD 256 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCE-----------------EEECCTTCTTCEEEEEECTTSCEEEEEEECSSS
T ss_pred cccccccccccCCCCEEEEEECCCCcccce-----------------EEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC
Confidence 99999987652100 01122235566889999999999988765
Q ss_pred -CCeEEEEECCC------Cc-EEEEeccCCcceEEEEEcCCCCEEEEEeCC----CcEEEEEccCcee--eeecccCCCC
Q psy15549 213 -DNTAIMWDVHK------GK-NLGILTEHKKFVQGVAWDPKNQYVATLSSD----RSLRTYSIQSKKV--ISRACRSKLP 278 (621)
Q Consensus 213 -dg~i~vwd~~~------~~-~~~~~~~~~~~v~~l~~sp~~~~l~s~~~d----g~i~iwd~~~~~~--~~~~~~~~~~ 278 (621)
+..|++||+.+ +. ....+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++.. ...+..+
T Consensus 257 ~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~--- 332 (710)
T 2xdw_A 257 PVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE--- 332 (710)
T ss_dssp SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC---
T ss_pred CccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC---
Confidence 56899999986 43 35556566665554 488999988877653 3588999876531 1111100
Q ss_pred CCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceee
Q psy15549 279 VDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVA 358 (621)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (621)
.....+..++|++++.++
T Consensus 333 ------------------~~~~~~~~~~~~~~~~lv-------------------------------------------- 350 (710)
T 2xdw_A 333 ------------------HEKDVLEWVACVRSNFLV-------------------------------------------- 350 (710)
T ss_dssp ------------------CSSCEEEEEEEETTTEEE--------------------------------------------
T ss_pred ------------------CCCCeEEEEEEEcCCEEE--------------------------------------------
Confidence 000123445555433333
Q ss_pred eeccceeeecCCCCCCCCccCCCcEEEEEEcCC--cEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEE-e---C
Q psy15549 359 VKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN--NILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIAS-S---T 432 (621)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~-s---~ 432 (621)
++...++ .|++||+.+++.+..+. .+...|..++++|+++.|+.. + .
T Consensus 351 --------------------------~~~~~~g~~~l~~~~~~~g~~~~~l~-~~~~~v~~~~~s~d~~~l~~~~ss~~~ 403 (710)
T 2xdw_A 351 --------------------------LCYLHDVKNTLQLHDLATGALLKIFP-LEVGSVVGYSGQKKDTEIFYQFTSFLS 403 (710)
T ss_dssp --------------------------EEEEETTEEEEEEEETTTCCEEEEEC-CCSSEEEEEECCTTCSEEEEEEECSSC
T ss_pred --------------------------EEEEECCEEEEEEEECCCCCEEEecC-CCCceEEEEecCCCCCEEEEEEeCCCC
Confidence 3333455 56778887777666664 467788999999999866633 2 4
Q ss_pred CCcEEEEEecCCc
Q psy15549 433 DGYCSIISFGDNE 445 (621)
Q Consensus 433 dg~i~iw~~~~~~ 445 (621)
.+.|++||+.+++
T Consensus 404 P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 404 PGIIYHCDLTKEE 416 (710)
T ss_dssp CCEEEEEETTSSS
T ss_pred CCEEEEEECCCCc
Confidence 5789999998877
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.5e-13 Score=130.06 Aligned_cols=283 Identities=10% Similarity=-0.006 Sum_probs=186.0
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
+...+.+++++++|. ++++...++.|. +|+.. +..... .+..+...+.++++++
T Consensus 13 ~~~~~~~i~~d~~g~-----l~v~~~~~~~v~--------------~~d~~-~~~~~~------~~~~~~~~~~~i~~~~ 66 (299)
T 2z2n_A 13 QDTGPYGITVSDKGK-----VWITQHKANMIS--------------CINLD-GKITEY------PLPTPDAKVMCLTISS 66 (299)
T ss_dssp SSCCEEEEEECTTSC-----EEEEETTTTEEE--------------EECTT-CCEEEE------ECSSTTCCEEEEEECT
T ss_pred cCCCccceEECCCCC-----EEEEecCCCcEE--------------EEcCC-CCeEEe------cCCcccCceeeEEECC
Confidence 345799999999997 777776678888 66655 221110 1122346799999999
Q ss_pred CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 92 NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 92 dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
+|.++++.. ++.|..|+.... +.. ..+......+..+++.++|.++++...++.|.+||. ++...
T Consensus 67 ~g~l~v~~~~~~~i~~~~~~g~------~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~------ 132 (299)
T 2z2n_A 67 DGEVWFTENAANKIGRITKKGI------IKE-YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR------ 132 (299)
T ss_dssp TSCEEEEETTTTEEEEECTTSC------EEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE------
T ss_pred CCCEEEeCCCCCeEEEECCCCc------EEE-EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE------
Confidence 999888876 677888876521 111 112224457899999999988888777889999997 44321
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE-eccCCcceEEEEEcCCCCEE
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI-LTEHKKFVQGVAWDPKNQYV 249 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~v~~l~~sp~~~~l 249 (621)
......+...+..+++.++|+++++...++.|..||. +++.... +......+.+++++++|+++
T Consensus 133 --------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 197 (299)
T 2z2n_A 133 --------------EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALW 197 (299)
T ss_dssp --------------EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEE
T ss_pred --------------EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEE
Confidence 0112234567899999999988877777789999998 6665433 33345568899999999977
Q ss_pred EEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCc
Q psy15549 250 ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRK 329 (621)
Q Consensus 250 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~ 329 (621)
++...++.|.+||. +++... +.. ......+.+++++++|+.+++..
T Consensus 198 v~~~~~~~i~~~~~-~g~~~~-~~~---------------------~~~~~~~~~i~~~~~g~l~v~~~----------- 243 (299)
T 2z2n_A 198 FVEIIGNKIGRITT-SGEITE-FKI---------------------PTPNARPHAITAGAGIDLWFTEW----------- 243 (299)
T ss_dssp EEETTTTEEEEECT-TCCEEE-EEC---------------------SSTTCCEEEEEECSTTCEEEEET-----------
T ss_pred EEccCCceEEEECC-CCcEEE-EEC---------------------CCCCCCceeEEECCCCCEEEecc-----------
Confidence 76666788999998 655322 110 01122356788888877554432
Q ss_pred ceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEec
Q psy15549 330 PISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIAN 409 (621)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 409 (621)
.++.|..||. ++........
T Consensus 244 -----------------------------------------------------------~~~~i~~~d~-~g~~~~~~~~ 263 (299)
T 2z2n_A 244 -----------------------------------------------------------GANKIGRLTS-NNIIEEYPIQ 263 (299)
T ss_dssp -----------------------------------------------------------TTTEEEEEET-TTEEEEEECS
T ss_pred -----------------------------------------------------------CCceEEEECC-CCceEEEeCC
Confidence 3456667776 3332211112
Q ss_pred ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc
Q psy15549 410 IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445 (621)
Q Consensus 410 ~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~ 445 (621)
.+...+.++++ ++|+++++.+ .+.|..++..+++
T Consensus 264 ~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 264 IKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp SSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred CCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 34467899999 8888776655 5678788877654
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-14 Score=137.91 Aligned_cols=241 Identities=13% Similarity=0.166 Sum_probs=167.9
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE-ccC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF-SPN 92 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~-spd 92 (621)
....+|++++++. ++++...++.|. +|+.... .... +.......+|...+.++++ .++
T Consensus 30 ~~p~~v~~~~~g~-----l~v~~~~~~~i~--------------~~d~~g~-~~~~-~~~~~~~~~~~~~p~~i~~~~~~ 88 (286)
T 1q7f_A 30 TEPSGVAVNAQND-----IIVADTNNHRIQ--------------IFDKEGR-FKFQ-FGECGKRDSQLLYPNRVAVVRNS 88 (286)
T ss_dssp SCEEEEEECTTCC-----EEEEEGGGTEEE--------------EECTTSC-EEEE-ECCBSSSTTCBSSEEEEEEETTT
T ss_pred CCCceEEECCCCC-----EEEEECCCCEEE--------------EECCCCc-EEEE-ecccCCCcccccCceEEEEEcCC
Confidence 4689999999997 888888899999 5554421 1100 0000011245567899999 578
Q ss_pred CCEEEEEc--CCceEEEEeccCccccccceeccccc-ccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 93 GELLASGD--DVGKEIWYLTERESGIANVEFASDLS-RHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 93 g~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
++++++.. ++.|.+|+. .+ .....+. .+...+..++++++|+++++...++.|.+||... +.+
T Consensus 89 g~l~v~~~~~~~~i~~~d~-~g-------~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~----- 154 (286)
T 1q7f_A 89 GDIIVTERSPTHQIQIYNQ-YG-------QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVL----- 154 (286)
T ss_dssp TEEEEEECGGGCEEEEECT-TS-------CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEE-----
T ss_pred CeEEEEcCCCCCEEEEECC-CC-------cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CEE-----
Confidence 88877774 788999983 33 2222222 2445789999999999888888889999999643 221
Q ss_pred CCcccccccccceeeeeee--cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC--CcceEEEEEcCC
Q psy15549 170 SNLDEENVNKEHWIVTKIL--RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH--KKFVQGVAWDPK 245 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~~v~~l~~sp~ 245 (621)
..+ ..+...+..++++++|+++++...++.|++||. +++.+..+..+ ...+..++++++
T Consensus 155 ----------------~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~ 217 (286)
T 1q7f_A 155 ----------------HKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSN 217 (286)
T ss_dssp ----------------EEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTT
T ss_pred ----------------EEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCC
Confidence 122 244567899999999998887778899999997 56666666443 357889999999
Q ss_pred CCEEEEEeCCC-cEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCC
Q psy15549 246 NQYVATLSSDR-SLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENS 324 (621)
Q Consensus 246 ~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~ 324 (621)
|+++++...++ .|.+||. .++.+..+.... ....+.+++++|+|+++++ + .
T Consensus 218 G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~---------------------~~~~~~~i~~~~~g~l~vs-~-----~ 269 (286)
T 1q7f_A 218 GEILIADNHNNFNLTIFTQ-DGQLISALESKV---------------------KHAQCFDVALMDDGSVVLA-S-----K 269 (286)
T ss_dssp CCEEEEECSSSCEEEEECT-TSCEEEEEEESS---------------------CCSCEEEEEEETTTEEEEE-E-----T
T ss_pred CCEEEEeCCCCEEEEEECC-CCCEEEEEcccC---------------------CCCcceeEEECCCCcEEEE-C-----C
Confidence 99888877775 9999996 455555443211 1113468999999986665 5 5
Q ss_pred CCCCcceeee
Q psy15549 325 DSTRKPISVT 334 (621)
Q Consensus 325 d~~i~~~~~~ 334 (621)
++.+++|+..
T Consensus 270 ~~~v~v~~~~ 279 (286)
T 1q7f_A 270 DYRLYIYRYV 279 (286)
T ss_dssp TTEEEEEECS
T ss_pred CCeEEEEEcc
Confidence 7888888754
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-15 Score=149.79 Aligned_cols=247 Identities=15% Similarity=0.125 Sum_probs=159.5
Q ss_pred CcEEEEEEccCCCEEEEEc----------CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC-
Q psy15549 82 KAVNVVRFSPNGELLASGD----------DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE- 150 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~----------d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d- 150 (621)
..+..+++ ||+.|+... +..+.+|++..+. . ..+ ..+..++|+|||++|+.++.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~-------~-~~l----~~~~~~~~SpDg~~la~~~~~~ 80 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA-------R-RFI----ENATMPRISPDGKKIAFMRANE 80 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC-------E-EEE----ESCEEEEECTTSSEEEEEEEET
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc-------e-EEc----ccCCCeEECCCCCEEEEEEecc
Confidence 35677778 899888642 3446777776642 1 122 468889999999999987654
Q ss_pred --C--cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-------------
Q psy15549 151 --S--TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD------------- 213 (621)
Q Consensus 151 --g--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d------------- 213 (621)
+ .|.+|++.+++. ..+..+.. +..++|+|||+.|+.++.+
T Consensus 81 ~~~~~~l~~~~~~~g~~----------------------~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 81 EKKVSEIWVADLETLSS----------------------KKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp TTTEEEEEEEETTTTEE----------------------EEEEEESE-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred CCCcceEEEEECCCCce----------------------EEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 3 377778776643 22222233 8999999999998887642
Q ss_pred --------------CeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCC-------cEEEEEccCceeeeec
Q psy15549 214 --------------NTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDR-------SLRTYSIQSKKVISRA 272 (621)
Q Consensus 214 --------------g~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~ 272 (621)
..|++||+.+++.+..+.. . .+..++|+|+| +++++..++ ...||.+.+++. ..+
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l 213 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKM 213 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEe
Confidence 5799999988877455544 3 78899999999 777776542 445555544433 222
Q ss_pred ccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCc
Q psy15549 273 CRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSL 352 (621)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~ 352 (621)
.. . ..+.. ++|||++|+.++. +..-.
T Consensus 214 ~~-----------------------~-~~~~~--~spdg~~l~~~~~-----~~~~~----------------------- 239 (347)
T 2gop_A 214 FE-----------------------K-VSFYA--VDSDGERILLYGK-----PEKKY----------------------- 239 (347)
T ss_dssp EE-----------------------E-ESEEE--EEECSSCEEEEEC-----CSSSC-----------------------
T ss_pred cc-----------------------C-cceee--ECCCCCEEEEEEc-----cccCC-----------------------
Confidence 10 0 11223 3899998877651 10000
Q ss_pred ccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEE-EEEcCCCCeEEEEe
Q psy15549 353 QYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTD-ITWSSDGKVLIASS 431 (621)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~-~~~spdg~~l~s~s 431 (621)
......|++|| +++. ..+...|...+.. +.|+ || ++++++
T Consensus 240 ----------------------------------~~~~~~l~~~d--~~~~-~~l~~~~~~~~~~~~~~s-dg-~~~~~~ 280 (347)
T 2gop_A 240 ----------------------------------MSEHNKLYIYD--GKEV-MGILDEVDRGVGQAKIKD-GK-VYFTLF 280 (347)
T ss_dssp ----------------------------------CCSSCEEEEEC--SSCE-EESSTTCCSEEEEEEEET-TE-EEEEEE
T ss_pred ----------------------------------ccccceEEEEC--CCce-EeccccCCcccCCccEEc-Cc-EEEEEe
Confidence 00235678888 4443 3343456677886 9999 98 889999
Q ss_pred CCCcEEEEEecCCcCCcccCCCCCcccccCCCC
Q psy15549 432 TDGYCSIISFGDNEIGIPYVPPSGEESKENDPT 464 (621)
Q Consensus 432 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (621)
.++.++|| +.+++....+ .+...+..+.+++
T Consensus 281 ~~~~~~l~-~~~g~~~~~~-~~~~~v~~~~~s~ 311 (347)
T 2gop_A 281 EEGSVNLY-IWDGEIKPIA-KGRHWIMGFDVDE 311 (347)
T ss_dssp ETTEEEEE-EESSSEEEEE-CSSSEEEEEEESS
T ss_pred cCCcEEEE-EcCCceEEEe-cCCCeEEeeeeeC
Confidence 99999999 9866553333 3344555566666
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-15 Score=146.70 Aligned_cols=263 Identities=11% Similarity=0.034 Sum_probs=174.3
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
..|.+++|++++..++... ++.++.|. . .....+..+...+.+++|+++|++++++..++.|.+||..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~ 75 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---A-------EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET 75 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---C-------EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred cccceeeecCCccceeEEeecccCcccc---c-------ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC
Confidence 3467788999887666544 77888882 1 33444556667789999999999888888899999999887
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC----CeEEEEECCCCcEEEEec--cCC
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD----NTAIMWDVHKGKNLGILT--EHK 234 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d----g~i~vwd~~~~~~~~~~~--~~~ 234 (621)
++.. .....+...+.+++++|+|+++++...+ +.|.+||..++.....+. .+.
T Consensus 76 ~~~~---------------------~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 134 (333)
T 2dg1_A 76 KEIK---------------------RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTA 134 (333)
T ss_dssp CCEE---------------------EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSC
T ss_pred CcEE---------------------EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccC
Confidence 7531 2222456789999999999988877666 689999998776543332 234
Q ss_pred cceEEEEEcCCCCEEEEEeC------CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeec
Q psy15549 235 KFVQGVAWDPKNQYVATLSS------DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 308 (621)
..+..++++|+|+++++... .+.|..||..+++...... ....+..++|+
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------------------~~~~~~~i~~~ 190 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ------------------------NISVANGIALS 190 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE------------------------EESSEEEEEEC
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec------------------------CCCcccceEEC
Confidence 56889999999988776543 2455556654443322110 01124678899
Q ss_pred CCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE
Q psy15549 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA 388 (621)
Q Consensus 309 pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (621)
|+|++|+++. .
T Consensus 191 ~dg~~l~v~~---------------------------------------------------------------------~ 201 (333)
T 2dg1_A 191 TDEKVLWVTE---------------------------------------------------------------------T 201 (333)
T ss_dssp TTSSEEEEEE---------------------------------------------------------------------G
T ss_pred CCCCEEEEEe---------------------------------------------------------------------C
Confidence 9988665443 1
Q ss_pred cCCcEEEEeCCC-CceeEEE-------ecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCC-----
Q psy15549 389 TENNILLYDTQH-ASPFAFI-------ANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSG----- 455 (621)
Q Consensus 389 ~dg~i~iwd~~~-~~~~~~~-------~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~----- 455 (621)
.++.|++||..+ +..+..+ ..++ ..+..++++++|+++++...++.|.+|+. +++....+..+..
T Consensus 202 ~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~ 279 (333)
T 2dg1_A 202 TANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHM 279 (333)
T ss_dssp GGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCS
T ss_pred CCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccc
Confidence 234566666542 2221110 0112 36788999999998888878899999998 4555555544432
Q ss_pred -cccccCCCCCCCCcc
Q psy15549 456 -EESKENDPTKGEPVR 470 (621)
Q Consensus 456 -~~~~~~~~~~~~~~~ 470 (621)
....+.+.+++..+.
T Consensus 280 ~~~~~~~~~~dg~~L~ 295 (333)
T 2dg1_A 280 LRSTHPQFIPGTNQLI 295 (333)
T ss_dssp CBCCEEEECTTSCEEE
T ss_pred cCcceEEECCCCCEEE
Confidence 355566677765554
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.66 E-value=1e-14 Score=158.35 Aligned_cols=285 Identities=9% Similarity=-0.005 Sum_probs=182.3
Q ss_pred EccCCCEEEEEc-CC---ceEEEEeccCccccccceec-ccccccCCCeEEEEECCCCCEEEE-----EeCCCcEEEEEc
Q psy15549 89 FSPNGELLASGD-DV---GKEIWYLTERESGIANVEFA-SDLSRHQKAVNVVRFSPNGELLAS-----GDDESTIIVWKQ 158 (621)
Q Consensus 89 ~spdg~~las~~-d~---~v~iw~~~~~~~~~~~~~~~-~~~~~h~~~V~~i~~sp~g~~l~s-----~s~dg~i~vwd~ 158 (621)
.+|+|.+++... ++ .-.+|.....+.....+.-. ..-.+|...+..++|||||++||. |+.+..|++||+
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 358999988765 33 35678776432211111111 112346667999999999999984 444578999999
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCe-------------EEEEECCCCc
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNT-------------AIMWDVHKGK 225 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~-------------i~vwd~~~~~ 225 (621)
.+++.+.. ..+... ....++|+|||+.|+.++.+.. |++|++.++.
T Consensus 155 ~tg~~~~~-------------------~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 155 DSGEWSKV-------------------DVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp TTCCBCSS-------------------CCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCG
T ss_pred CCCCCcCC-------------------cccCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCc
Confidence 99875310 011111 1257899999999999988766 9999998876
Q ss_pred ----EEEEeccCCcceEEEEEcCCCCEEEEEeCCC----cEEEEEccCceeeeecccCCCCCCCccccccccccccccCC
Q psy15549 226 ----NLGILTEHKKFVQGVAWDPKNQYVATLSSDR----SLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDT 297 (621)
Q Consensus 226 ----~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (621)
.+.....+...+..+.|+|||++|+..+.++ .|.+|+..++... .+..+
T Consensus 214 ~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~---------------------- 270 (695)
T 2bkl_A 214 SKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVKG---------------------- 270 (695)
T ss_dssp GGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEEC----------------------
T ss_pred hhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-EeecC----------------------
Confidence 3333344556788999999999998877665 5666655443321 11100
Q ss_pred cccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCc
Q psy15549 298 MKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLF 377 (621)
Q Consensus 298 ~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (621)
...+....+ ++|. ++..+. .
T Consensus 271 -~~~~~~~~~-~~g~-l~~~s~----~----------------------------------------------------- 290 (695)
T 2bkl_A 271 -VGAKYEVHA-WKDR-FYVLTD----E----------------------------------------------------- 290 (695)
T ss_dssp -SSCCEEEEE-ETTE-EEEEEC----T-----------------------------------------------------
T ss_pred -CCceEEEEe-cCCc-EEEEEC----C-----------------------------------------------------
Confidence 001122333 4444 333220 0
Q ss_pred cCCCcEEEEEEcCCcEEEEeCCCCce--eEEEeccc-ccceEEEEEcCCCCeEEEEeCCCcEEEEEec-CCcCCcccCCC
Q psy15549 378 KLPYRIVIAVATENNILLYDTQHASP--FAFIANIH-YTKLTDITWSSDGKVLIASSTDGYCSIISFG-DNEIGIPYVPP 453 (621)
Q Consensus 378 ~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~h-~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~-~~~~~~~~~~~ 453 (621)
...++.|++||+.++.. ...+...+ ...+..++|+ ++.++++...|+..+||.++ ++.....+..+
T Consensus 291 ---------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~ 360 (695)
T 2bkl_A 291 ---------GAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLP 360 (695)
T ss_dssp ---------TCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCS
T ss_pred ---------CCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCC
Confidence 01357889999887753 23333323 4568889998 77788888999999999877 45544555554
Q ss_pred -CCcccccCCCCCCCCcc----cCCCcccHHHhcccCcc
Q psy15549 454 -SGEESKENDPTKGEPVR----SEDKPRSAEQAKGEGKV 487 (621)
Q Consensus 454 -~~~~~~~~~~~~~~~~~----s~~~~~~~~~w~~~~~~ 487 (621)
...+..+.+++++..++ +...++.++.|++....
T Consensus 361 ~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 361 GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 55566777888888777 66788999999876543
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-14 Score=158.95 Aligned_cols=284 Identities=11% Similarity=0.072 Sum_probs=183.7
Q ss_pred cCCCEEEEEc-C-Cc--eEEEEeccCccccccc-eecccccccCCCeEEEEECCCCCEEEEEeCCC-----cEEEEEccC
Q psy15549 91 PNGELLASGD-D-VG--KEIWYLTERESGIANV-EFASDLSRHQKAVNVVRFSPNGELLASGDDES-----TIIVWKQKT 160 (621)
Q Consensus 91 pdg~~las~~-d-~~--v~iw~~~~~~~~~~~~-~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg-----~i~vwd~~~ 160 (621)
|+|++++... + +. -.+|...........+ .....-.+|...+..++|||||++||.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8999888765 2 22 2677765432211111 00111223555788999999999998776543 899999998
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCe----------------EEEEECCCC
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNT----------------AIMWDVHKG 224 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~----------------i~vwd~~~~ 224 (621)
++... ..+. ...+..++|+|||+.|+.++.++. |++|++.++
T Consensus 161 g~~~~--------------------~~~~--~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~ 218 (710)
T 2xdw_A 161 AKELP--------------------DVLE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTD 218 (710)
T ss_dssp TEEEE--------------------EEEE--EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSC
T ss_pred CCCCc--------------------cccc--CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCC
Confidence 86431 1111 122567999999999999888765 999999887
Q ss_pred cE----EEEeccCCcceEEEEEcCCCCEEEEEeC-----CCcEEEEEccC------ce-eeeecccCCCCCCCccccccc
Q psy15549 225 KN----LGILTEHKKFVQGVAWDPKNQYVATLSS-----DRSLRTYSIQS------KK-VISRACRSKLPVDSSHELFDK 288 (621)
Q Consensus 225 ~~----~~~~~~~~~~v~~l~~sp~~~~l~s~~~-----dg~i~iwd~~~------~~-~~~~~~~~~~~~~~~~~~~~~ 288 (621)
+. +.....+...+..+.|+|||++|+..+. +..|.+||+.+ +. ....+..+
T Consensus 219 ~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~------------- 285 (710)
T 2xdw_A 219 QSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN------------- 285 (710)
T ss_dssp GGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS-------------
T ss_pred cccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC-------------
Confidence 62 2232334556789999999999988765 56899999876 32 12222111
Q ss_pred cccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeec
Q psy15549 289 VVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFEL 368 (621)
Q Consensus 289 ~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (621)
...+. ..|+|+|+.|+..+. .
T Consensus 286 ----------~~~~~-~~~s~dg~~l~~~s~-----~------------------------------------------- 306 (710)
T 2xdw_A 286 ----------FEGEY-DYVTNEGTVFTFKTN-----R------------------------------------------- 306 (710)
T ss_dssp ----------SSSCE-EEEEEETTEEEEEEC-----T-------------------------------------------
T ss_pred ----------CCcEE-EEEeccCCEEEEEEC-----C-------------------------------------------
Confidence 01111 247777777766541 0
Q ss_pred CCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCce--eEEEecccc-cceEEEEEcCCCCeEEEEeCCCcE--EEEEecC
Q psy15549 369 KPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP--FAFIANIHY-TKLTDITWSSDGKVLIASSTDGYC--SIISFGD 443 (621)
Q Consensus 369 ~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~h~-~~v~~~~~spdg~~l~s~s~dg~i--~iw~~~~ 443 (621)
.+....|++||+.++.. ...+...+. ..+.+++|++++.++++...|+.. .+|++.+
T Consensus 307 ------------------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~ 368 (710)
T 2xdw_A 307 ------------------HSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT 368 (710)
T ss_dssp ------------------TCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT
T ss_pred ------------------CCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC
Confidence 00235788899887642 344433222 268889999888888888888865 4556556
Q ss_pred CcCCcccCCCCCcccccCCCCCCCCcc----cCCCcccHHHhcccCc
Q psy15549 444 NEIGIPYVPPSGEESKENDPTKGEPVR----SEDKPRSAEQAKGEGK 486 (621)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----s~~~~~~~~~w~~~~~ 486 (621)
|+....+..+.+.+..+.+++++..++ +...++.++.|++...
T Consensus 369 g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 369 GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred CCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 776666776766666777888887555 5567888888886543
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.64 E-value=7.4e-15 Score=159.51 Aligned_cols=163 Identities=9% Similarity=-0.028 Sum_probs=110.7
Q ss_pred ccccCcEEEEEEccCCCEEEEEc------CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC
Q psy15549 78 SRHQKAVNVVRFSPNGELLASGD------DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES 151 (621)
Q Consensus 78 ~~h~~~V~~l~~spdg~~las~~------d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg 151 (621)
.+|...+.+++|||||++||.+. +..|++|++.++... ....+... ....++|+|||+.|+.++.|.
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~-----~~~~~~~~--~~~~~~wspDg~~l~~~~~d~ 189 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS-----KVDVIEGG--KYATPKWTPDSKGFYYEWLPT 189 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC-----SSCCBSCC--TTCCCEECTTSSEEEEEECCC
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc-----CCcccCcc--cccceEEecCCCEEEEEEecC
Confidence 35666799999999999999543 246899999876310 01111111 125789999999999998877
Q ss_pred c-------------EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC----
Q psy15549 152 T-------------IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN---- 214 (621)
Q Consensus 152 ~-------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg---- 214 (621)
. |++|++.++..... +......+...+..+.|+|||++|+.++.++
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~-----------------lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 252 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDT-----------------VVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEN 252 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCE-----------------EEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhce-----------------EEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCce
Confidence 6 99999987753110 1122334556789999999999998877665
Q ss_pred eEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeC----CCcEEEEEccCce
Q psy15549 215 TAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS----DRSLRTYSIQSKK 267 (621)
Q Consensus 215 ~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~----dg~i~iwd~~~~~ 267 (621)
.|++|+..++.. ..+..+...+....+ ++|. |+..+. ++.|.+||+.++.
T Consensus 253 ~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 253 DVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEEECTTCSSC-EEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred EEEEEcCCCCce-EEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 677777655543 444455555666666 5666 554443 5789999987653
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.63 E-value=9.7e-14 Score=131.95 Aligned_cols=241 Identities=8% Similarity=0.008 Sum_probs=161.2
Q ss_pred cEEEEEEccCCCEEE-EEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 83 AVNVVRFSPNGELLA-SGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 83 ~V~~l~~spdg~~la-s~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
...+++++++|++++ +.. ++.|.+|+..... .......+...+.+++++++|+++++.. ++.|.+||...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~ 96 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG-------TTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGS 96 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcc-------cceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCC
Confidence 678999999999777 433 6778888765431 1111122334678899999998666665 88999999776
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 240 (621)
.... .........+..++++++|+++++...++.|.+|+..+.............+.++
T Consensus 97 ~~~~---------------------~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i 155 (270)
T 1rwi_B 97 NNQT---------------------VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGV 155 (270)
T ss_dssp SCCE---------------------ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCE
T ss_pred ceEe---------------------eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeE
Confidence 5421 1111233568999999999977777778899999876554433332333467889
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccc
Q psy15549 241 AWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320 (621)
Q Consensus 241 ~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~ 320 (621)
+++++|+++++...++.|.+||........... .....+.+++++++|..+++..
T Consensus 156 ~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-----------------------~~~~~p~~i~~d~~g~l~v~~~-- 210 (270)
T 1rwi_B 156 AVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF-----------------------TDITAPWGIAVDEAGTVYVTEH-- 210 (270)
T ss_dssp EECTTCCEEEEEGGGTEEEEECTTTCCEEECCC-----------------------SSCCSEEEEEECTTCCEEEEET--
T ss_pred EEeCCCCEEEEECCCCEEEEEecCCCceEeecc-----------------------cCCCCceEEEECCCCCEEEEEC--
Confidence 999999977766667899999987654332111 0012346788888875444432
Q ss_pred ccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC
Q psy15549 321 LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH 400 (621)
Q Consensus 321 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 400 (621)
.++.|.+||...
T Consensus 211 --------------------------------------------------------------------~~~~v~~~~~~~ 222 (270)
T 1rwi_B 211 --------------------------------------------------------------------NTNQVVKLLAGS 222 (270)
T ss_dssp --------------------------------------------------------------------TTSCEEEECTTC
T ss_pred --------------------------------------------------------------------CCCcEEEEcCCC
Confidence 345677777655
Q ss_pred CceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcC
Q psy15549 401 ASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 401 ~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~ 446 (621)
..... ....+...+.+++++++|+.+++...++.|+++++...+.
T Consensus 223 ~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 223 TTSTV-LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp SCCEE-CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred Cccee-eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 43322 2122335789999999999888888999999999886554
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.1e-13 Score=133.57 Aligned_cols=242 Identities=12% Similarity=0.127 Sum_probs=161.1
Q ss_pred cccccCcEEEEEEccCCC-EEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEE
Q psy15549 77 LSRHQKAVNVVRFSPNGE-LLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~-~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~ 154 (621)
+..+.....+++|+|+|+ +++++. ++.|..|+...+ ...+..+...+.+++++++|+++++...++.|.
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---------LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---------EEEEESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---------eEEEECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 344556788999999998 566665 778999987753 223344667799999999999888877778999
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecC-CCCCeEEEEECCCCCEEEEE----e-------------CCCeE
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRG-HLEDVYDISWSPTSTHLISG----S-------------VDNTA 216 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~spd~~~l~s~----~-------------~dg~i 216 (621)
+||..+++.... .....+ ....+..++++|+|+++++. + ..+.|
T Consensus 94 ~~d~~~g~~~~~------------------~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l 155 (296)
T 3e5z_A 94 RQREPGGEWESI------------------ADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWV 155 (296)
T ss_dssp EECSTTCCEEEE------------------ECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEE
T ss_pred EEcCCCCcEEEE------------------eeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEE
Confidence 999877653210 000111 12356789999999988873 2 13456
Q ss_pred EEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEcc-Ccee---eeecccCCCCCCCccccccccccc
Q psy15549 217 IMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQ-SKKV---ISRACRSKLPVDSSHELFDKVVPL 292 (621)
Q Consensus 217 ~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 292 (621)
..++.. ++ +..+..+......++|+|+++.|++.+.++.|.+|++. ++.. ...+ .
T Consensus 156 ~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~------------------ 214 (296)
T 3e5z_A 156 FRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-T------------------ 214 (296)
T ss_dssp EEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-C------------------
T ss_pred EEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e------------------
Confidence 666654 44 34444566677899999999999777778899999986 4433 1111 0
Q ss_pred cccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCC
Q psy15549 293 FHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSD 372 (621)
Q Consensus 293 ~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (621)
.....+.+++++++|+++++
T Consensus 215 ----~~~~~p~~i~~d~~G~l~v~-------------------------------------------------------- 234 (296)
T 3e5z_A 215 ----VEPGKTDGLRVDAGGLIWAS-------------------------------------------------------- 234 (296)
T ss_dssp ----CSSSCCCSEEEBTTSCEEEE--------------------------------------------------------
T ss_pred ----CCCCCCCeEEECCCCCEEEE--------------------------------------------------------
Confidence 01112345566666553332
Q ss_pred CCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEE-cCCCCeEEEEeCCCcEEEEEecCCcC
Q psy15549 373 DKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITW-SSDGKVLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 373 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~-spdg~~l~s~s~dg~i~iw~~~~~~~ 446 (621)
. ++.|.+||.. ++.+..+.. +.. +++++| +|+++.|++++.++ +.-++..+..+
T Consensus 235 ---------------~-~~~v~~~~~~-g~~~~~~~~-~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 235 ---------------A-GDGVHVLTPD-GDELGRVLT-PQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp ---------------E-TTEEEEECTT-SCEEEEEEC-SSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred ---------------c-CCeEEEECCC-CCEEEEEEC-CCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 2 5778999986 666666643 555 899999 68999898888763 44555555554
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-13 Score=131.83 Aligned_cols=230 Identities=14% Similarity=0.097 Sum_probs=159.0
Q ss_pred eeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 7 EISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 7 ~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
+.+..+.....+++|+|+++ .+++++..++.|. .|+...+ . . .+..+...+.+
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~----~l~~~~~~~~~i~--------------~~~~~~~-~-~-------~~~~~~~~~~~ 73 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARS----AVIFSDVRQNRTW--------------AWSDDGQ-L-S-------PEMHPSHHQNG 73 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGT----EEEEEEGGGTEEE--------------EEETTSC-E-E-------EEESSCSSEEE
T ss_pred EEEecCCccccCCeEeCCCC----EEEEEeCCCCEEE--------------EEECCCC-e-E-------EEECCCCCcce
Confidence 44445666789999999996 3677888889998 8887655 1 1 13446678999
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccccceecc-cccc-cCCCeEEEEECCCCCEEEEEeC--------------
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFAS-DLSR-HQKAVNVVRFSPNGELLASGDD-------------- 149 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~-~~~~-h~~~V~~i~~sp~g~~l~s~s~-------------- 149 (621)
++++++|+++++.. ++.|.+|+...+.. .... .... ....+..++++|+|+++++.+.
T Consensus 74 l~~~~dg~l~v~~~~~~~i~~~d~~~g~~-----~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~ 148 (296)
T 3e5z_A 74 HCLNKQGHLIACSHGLRRLERQREPGGEW-----ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEM 148 (296)
T ss_dssp EEECTTCCEEEEETTTTEEEEECSTTCCE-----EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCC
T ss_pred eeECCCCcEEEEecCCCeEEEEcCCCCcE-----EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccc
Confidence 99999999888776 57899999865521 1111 1111 1235678999999998887321
Q ss_pred ---CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC-CCc
Q psy15549 150 ---ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH-KGK 225 (621)
Q Consensus 150 ---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~-~~~ 225 (621)
.+.|..++.. +. . ..+..+......++|+|+++.|++.+.++.|.+|++. ++.
T Consensus 149 ~~~~~~l~~~~~~-g~-~---------------------~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~ 205 (296)
T 3e5z_A 149 ELPGRWVFRLAPD-GT-L---------------------SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGE 205 (296)
T ss_dssp CSSSCEEEEECTT-SC-E---------------------EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSC
T ss_pred cCCCcEEEEECCC-CC-E---------------------EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCc
Confidence 2345444443 22 1 2334556678899999999988777778999999986 555
Q ss_pred E---EEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccce
Q psy15549 226 N---LGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFF 302 (621)
Q Consensus 226 ~---~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 302 (621)
. ...+..+...+.+++++++|+++++. ++.|.+|+.. ++.+..+..+ .. +
T Consensus 206 ~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~-----------------------~~-~ 258 (296)
T 3e5z_A 206 TEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTP-----------------------QT-T 258 (296)
T ss_dssp EEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECS-----------------------SC-C
T ss_pred CcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECC-----------------------CC-c
Confidence 4 23333345567789999999876655 8889999986 5555554321 11 4
Q ss_pred eeeee-cCCCCeEEecc
Q psy15549 303 RRLTF-SPDGQLLIAPS 318 (621)
Q Consensus 303 ~~~~~-spdg~~l~~~s 318 (621)
.+++| +|+++.|++++
T Consensus 259 ~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 259 SNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp CEEEEESTTSCEEEEEE
T ss_pred eeEEEECCCCCEEEEEc
Confidence 78899 68999888876
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.2e-13 Score=135.16 Aligned_cols=274 Identities=8% Similarity=0.036 Sum_probs=183.3
Q ss_pred CCceEEEEeccCccccccceecccc------cccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCccc
Q psy15549 101 DVGKEIWYLTERESGIANVEFASDL------SRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDE 174 (621)
Q Consensus 101 d~~v~iw~~~~~~~~~~~~~~~~~~------~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 174 (621)
+++|.+||..++. ....+ .........+.+. +++++++...++.|.+||..+++.+
T Consensus 16 ~~~l~~~d~~t~~-------~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~---------- 77 (328)
T 3dsm_A 16 NATLSYYDPATCE-------VENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEV---------- 77 (328)
T ss_dssp CBEEEEEETTTTE-------EECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEE----------
T ss_pred CceEEEEECCCCE-------EhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEE----------
Confidence 6779999988763 22211 0122345677774 3455666667899999999988754
Q ss_pred ccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCC-----cceEEEEEcCCCCEE
Q psy15549 175 ENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHK-----KFVQGVAWDPKNQYV 249 (621)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-----~~v~~l~~sp~~~~l 249 (621)
..+. .......++++++++.+++...++.|.+||+.+++....+.... .....+++ ++..|
T Consensus 78 -----------~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~l 143 (328)
T 3dsm_A 78 -----------GRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYV 143 (328)
T ss_dssp -----------EEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEE
T ss_pred -----------EEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEE
Confidence 2232 34668899999998544444478999999999998877665333 14567777 35555
Q ss_pred EEEe--CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCC
Q psy15549 250 ATLS--SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDST 327 (621)
Q Consensus 250 ~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~ 327 (621)
+++. .++.|.+||+.+++.+..+.... ....++++|+|++++++.+...
T Consensus 144 yv~~~~~~~~v~viD~~t~~~~~~i~~g~------------------------~p~~i~~~~dG~l~v~~~~~~~----- 194 (328)
T 3dsm_A 144 YVNCWSYQNRILKIDTETDKVVDELTIGI------------------------QPTSLVMDKYNKMWTITDGGYE----- 194 (328)
T ss_dssp EEEECTTCCEEEEEETTTTEEEEEEECSS------------------------CBCCCEECTTSEEEEEBCCBCT-----
T ss_pred EEEcCCCCCEEEEEECCCCeEEEEEEcCC------------------------CccceEEcCCCCEEEEECCCcc-----
Confidence 5555 48899999999998877664211 1257899999987666542100
Q ss_pred CcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEE
Q psy15549 328 RKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFI 407 (621)
Q Consensus 328 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 407 (621)
-..| ....+.|.++|..+++....+
T Consensus 195 ~~~~-------------------------------------------------------~~~~~~v~~id~~t~~v~~~~ 219 (328)
T 3dsm_A 195 GSPY-------------------------------------------------------GYEAPSLYRIDAETFTVEKQF 219 (328)
T ss_dssp TCSS-------------------------------------------------------CBCCCEEEEEETTTTEEEEEE
T ss_pred CCcc-------------------------------------------------------ccCCceEEEEECCCCeEEEEE
Confidence 0000 012478999999998877666
Q ss_pred ecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcc-cCC-CCCcccccCCCC-CCCCcccC----CCcccHHH
Q psy15549 408 ANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIP-YVP-PSGEESKENDPT-KGEPVRSE----DKPRSAEQ 480 (621)
Q Consensus 408 ~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~-~~~-~~~~~~~~~~~~-~~~~~~s~----~~~~~~~~ 480 (621)
..........++|+||+++|.++.. .|.+||..++++... +.. .......+.+.| ++...++. ..++.|.+
T Consensus 220 ~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v 297 (328)
T 3dsm_A 220 KFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYR 297 (328)
T ss_dssp ECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEE
T ss_pred ecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEE
Confidence 4322347899999999999888755 899999998886432 111 123445567777 45555554 56888999
Q ss_pred hcccCccccccc
Q psy15549 481 AKGEGKVLGEKQ 492 (621)
Q Consensus 481 w~~~~~~~~~~~ 492 (621)
|+..++.+.++.
T Consensus 298 ~d~~g~~~~~i~ 309 (328)
T 3dsm_A 298 YSPQGKLIDEFY 309 (328)
T ss_dssp ECTTCCEEEEEE
T ss_pred ECCCCCEEEEEE
Confidence 998888776665
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.60 E-value=8.7e-14 Score=152.20 Aligned_cols=161 Identities=14% Similarity=0.043 Sum_probs=107.5
Q ss_pred cccCcEEEEEEccCCCEEEEEcC------CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 79 RHQKAVNVVRFSPNGELLASGDD------VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~d------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
+|...+..++|||||++||.+.+ ..|++|++.++. .... ..+...+..++|+|| +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~-------~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~ 230 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK-------PLAD-ELKWVKFSGLAWLGN-DALLYSRFAEP 230 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC-------EEEE-EEEEEESCCCEESTT-SEEEEEECCCC
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC-------CCCc-cCCCceeccEEEECC-CEEEEEEecCc
Confidence 34457889999999999998762 248999988763 1111 112222357899999 98988876654
Q ss_pred --------------EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC----
Q psy15549 153 --------------IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN---- 214 (621)
Q Consensus 153 --------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg---- 214 (621)
|++|++.++..... +......+...+..+.|+|||++|+..+.++
T Consensus 231 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~-----------------lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 293 (741)
T 1yr2_A 231 KEGQAFQALNYNQTVWLHRLGTPQSADQ-----------------PVFATPELPKRGHGASVSSDGRWVVITSSEGTDPV 293 (741)
T ss_dssp --------CCCCCEEEEEETTSCGGGCE-----------------EEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSC
T ss_pred ccccccccCCCCCEEEEEECCCCchhCE-----------------EEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCc
Confidence 88898876642110 0111223444588999999999988877543
Q ss_pred -eEEEEECCCC--cEEEEeccCCcceEEEEEcCCCCEEEEEeCC----CcEEEEEccCc
Q psy15549 215 -TAIMWDVHKG--KNLGILTEHKKFVQGVAWDPKNQYVATLSSD----RSLRTYSIQSK 266 (621)
Q Consensus 215 -~i~vwd~~~~--~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~d----g~i~iwd~~~~ 266 (621)
.|++||+.++ ++...+..+...+... ++|+|+.|+..+.+ +.|.+||+.++
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp CEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred ceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 8999999877 4144554555555555 34899998887764 45889998764
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.59 E-value=8.3e-14 Score=136.31 Aligned_cols=247 Identities=11% Similarity=-0.004 Sum_probs=162.9
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
.....+++.. ++++++.. ++.|.+||..++ +.+..+. .......++++++++++++...++.|.+||..+
T Consensus 44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~-------~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t 114 (328)
T 3dsm_A 44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTF-------KEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT 114 (328)
T ss_dssp SCEEEEEEET-TEEEEEEGGGTEEEEEETTTC-------CEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTT
T ss_pred ccceEEEEEC-CEEEEEEcCCCEEEEEECccc-------EEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 4467777743 44444444 788999999876 4444443 345688999999885545544789999999988
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe--CCCeEEEEECCCCcEEEEeccCCcceE
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS--VDNTAIMWDVHKGKNLGILTEHKKFVQ 238 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~v~ 238 (621)
++....++.. ...+.......+++ ++..|+++. .++.|.+||+.+++.+..+... ....
T Consensus 115 ~~~~~~i~~g----------------~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~ 175 (328)
T 3dsm_A 115 YEITGYIECP----------------DMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPT 175 (328)
T ss_dssp TEEEEEEECT----------------TCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBC
T ss_pred CeEEEEEEcC----------------CccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCcc
Confidence 7643211000 00011113456666 344555554 4889999999999888777543 3456
Q ss_pred EEEEcCCCCEEEEEeCC----------CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeec
Q psy15549 239 GVAWDPKNQYVATLSSD----------RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 308 (621)
.++++|+|++++++..+ +.|.++|..+++....+.... ......++|+
T Consensus 176 ~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~----------------------g~~p~~la~~ 233 (328)
T 3dsm_A 176 SLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL----------------------GDWPSEVQLN 233 (328)
T ss_dssp CCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT----------------------TCCCEEEEEC
T ss_pred ceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC----------------------CCCceeEEEe
Confidence 88999999877766554 789999999888766553210 1134789999
Q ss_pred CCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE
Q psy15549 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA 388 (621)
Q Consensus 309 pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (621)
|++++|+++.
T Consensus 234 ~d~~~lyv~~---------------------------------------------------------------------- 243 (328)
T 3dsm_A 234 GTRDTLYWIN---------------------------------------------------------------------- 243 (328)
T ss_dssp TTSCEEEEES----------------------------------------------------------------------
T ss_pred cCCCEEEEEc----------------------------------------------------------------------
Confidence 9998887754
Q ss_pred cCCcEEEEeCCCCceeEE-EecccccceEEEEEcCC-CCeEEEE----eCCCcEEEEEecCCcCCcccC
Q psy15549 389 TENNILLYDTQHASPFAF-IANIHYTKLTDITWSSD-GKVLIAS----STDGYCSIISFGDNEIGIPYV 451 (621)
Q Consensus 389 ~dg~i~iwd~~~~~~~~~-~~~~h~~~v~~~~~spd-g~~l~s~----s~dg~i~iw~~~~~~~~~~~~ 451 (621)
+.|++||..+++.... +...+......++++|+ +..+++. ..++.|.+|+.. ++++..+.
T Consensus 244 --~~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 244 --NDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp --SSEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred --cEEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 1567777777664321 11112456889999994 5555555 578999999988 77766653
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.59 E-value=3.8e-12 Score=126.21 Aligned_cols=295 Identities=10% Similarity=-0.047 Sum_probs=178.1
Q ss_pred EeccccccCCcceEEEEecC--Cc---eEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 19 VDIQLKQEKDNCYRIVTGGA--DS---HVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 19 l~~spd~~~~~~~~l~tg~~--dg---~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
+...|+++ ++++... .. .|. ++|..+++.. ..+.....+ .++|||||
T Consensus 26 ~~~~~~~~-----~~yv~~~~~~~~~~~v~--------------v~D~~t~~~~-------~~i~~g~~p--~i~~spDg 77 (373)
T 2mad_H 26 EAPGADGR-----RSYINLPAHHSAIIQQW--------------VLDAGSGSIL-------GHVNGGFLP--NPVAAHSG 77 (373)
T ss_pred ccCCCCCC-----EEEEeCCcccCCccEEE--------------EEECCCCeEE-------EEecCCCCC--CeEECCCC
Confidence 34557776 6666553 32 566 7777655432 123332333 89999999
Q ss_pred CEEEEEc-----------CCceEEEEeccCccccccceecccccc-------cCCCeEEEEECCCCCEEEEEeC--CCcE
Q psy15549 94 ELLASGD-----------DVGKEIWYLTERESGIANVEFASDLSR-------HQKAVNVVRFSPNGELLASGDD--ESTI 153 (621)
Q Consensus 94 ~~las~~-----------d~~v~iw~~~~~~~~~~~~~~~~~~~~-------h~~~V~~i~~sp~g~~l~s~s~--dg~i 153 (621)
++|+++. ++.|.+||..... ....+.- +......++|+|||++|+++.. ++.|
T Consensus 78 ~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~-------~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v 150 (373)
T 2mad_H 78 SEFALASTSFSRIAKGKRTDYVEVFDPVTFL-------PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAV 150 (373)
T ss_pred CEEEEEeccccccccCCCCCeEEEEECCCCc-------EEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeE
Confidence 9998874 4568899987542 2222111 0123457999999999998874 4789
Q ss_pred EEEEccCCCCCCC-CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEec
Q psy15549 154 IVWKQKTDQDLPE-FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 154 ~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~~~~~~~~ 231 (621)
.++| .+++.+.. + . ... ++.+.|++ +.+++.+.||.+.++|. +++......
T Consensus 151 ~viD-~t~~~~~~~i---------------------~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~ 203 (373)
T 2mad_H 151 GLVV-QGGSSDDQLL---------------------S-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGL 203 (373)
T ss_pred EEEE-CCCCEEeEEc---------------------C-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEe
Confidence 9999 88875422 2 1 111 24455555 45566778999999999 887663321
Q ss_pred -----cCCcc-eEEEEEcCCCCEEEEEeCCCcEEEEEccCcee--eeecccCCCCCCCccccccccccccccCCccccee
Q psy15549 232 -----EHKKF-VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV--ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303 (621)
Q Consensus 232 -----~~~~~-v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 303 (621)
....+ .....+.+++..++..+..+.+.+.|+.+... +..+........ ..........
T Consensus 204 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~-------------~~~~~p~g~~ 270 (373)
T 2mad_H 204 VGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRK-------------ADTWRPGGWQ 270 (373)
T ss_pred ccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccc-------------ccceecCceE
Confidence 11112 12345677766655556788999999875432 221110000000 0000011123
Q ss_pred eeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcE
Q psy15549 304 RLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRI 383 (621)
Q Consensus 304 ~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (621)
.++++||++.++++.. .+. -+. +
T Consensus 271 ~~~~s~d~~~lyV~~~-----~~~--~~~-------------------~------------------------------- 293 (373)
T 2mad_H 271 QVAYLKSSDGIYLLTS-----EQS--AWK-------------------L------------------------------- 293 (373)
T ss_pred eEEECCCCCEEEEEec-----cCC--ccc-------------------c-------------------------------
Confidence 3566666666655431 000 000 0
Q ss_pred EEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEEe-CCCcEEEEEecCCcCCccc
Q psy15549 384 VIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIASS-TDGYCSIISFGDNEIGIPY 450 (621)
Q Consensus 384 l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~s-~dg~i~iw~~~~~~~~~~~ 450 (621)
....+.|.++|..+++.+..+..++ ...+++|+|||+ +|+++. .++.|.+||+.+++....+
T Consensus 294 ---~~~~~~V~VID~~t~~vv~~i~~g~--~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 294 ---HAAAKEVTSVTGLVGQTSSQISLGH--DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ---cCCCCeEEEEECCCCEEEEEEECCC--CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 0024689999999999998886433 688999999999 777776 5899999999999887663
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.9e-12 Score=124.92 Aligned_cols=269 Identities=13% Similarity=0.010 Sum_probs=175.1
Q ss_pred ccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy15549 78 SRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVW 156 (621)
Q Consensus 78 ~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vw 156 (621)
..+...+.+++++++|+++++.. ++.|.+|+.. +.. .. ..+..+...+.+++++++|.++++...++.|..|
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-----~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 83 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-----TE-YPLPTPDAKVMCLTISSDGEVWFTENAANKIGRI 83 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-----EE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-----EE-ecCCcccCceeeEEECCCCCEEEeCCCCCeEEEE
Confidence 34456799999999999888776 6789999876 321 11 1122244678999999999988887778889999
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE-eccCCc
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI-LTEHKK 235 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~ 235 (621)
+.. +. .. ...+......+.++++.+++.++++...++.|.+||. +++.... ......
T Consensus 84 ~~~-g~-~~-------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~ 141 (299)
T 2z2n_A 84 TKK-GI-IK-------------------EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGS 141 (299)
T ss_dssp CTT-SC-EE-------------------EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTC
T ss_pred CCC-Cc-EE-------------------EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCC
Confidence 875 22 10 0112234567899999999988887777889999998 5554432 233455
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
.+.+++++++|+.+++...++.|..||. +++...... ......+.+++++++|.+++
T Consensus 142 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~----------------------~~~~~~~~~i~~~~~g~l~v 198 (299)
T 2z2n_A 142 YPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKI----------------------PTPASGPVGITKGNDDALWF 198 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEEC----------------------SSTTCCEEEEEECTTSSEEE
T ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeC----------------------CCCCCcceeEEECCCCCEEE
Confidence 6889999999988776666788999998 655432110 00112346777887776544
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
+.. .++.|.+
T Consensus 199 ~~~----------------------------------------------------------------------~~~~i~~ 208 (299)
T 2z2n_A 199 VEI----------------------------------------------------------------------IGNKIGR 208 (299)
T ss_dssp EET----------------------------------------------------------------------TTTEEEE
T ss_pred Ecc----------------------------------------------------------------------CCceEEE
Confidence 432 2456777
Q ss_pred EeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcc-cCCCCCcccccCCCCCCCCccc
Q psy15549 396 YDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIP-YVPPSGEESKENDPTKGEPVRS 471 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s 471 (621)
||. +++........+...+.+++++++|+.+++...++.|..|+. ++.+... +.........+.+ +++...++
T Consensus 209 ~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~ 282 (299)
T 2z2n_A 209 ITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFA 282 (299)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEE
T ss_pred ECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEE
Confidence 777 554332212234567899999999997776667889999998 4443221 2222233344444 55554443
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.58 E-value=4.8e-13 Score=126.86 Aligned_cols=222 Identities=14% Similarity=0.102 Sum_probs=156.6
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccccc-CcEEEEEEccCCCEEEEEcCCceEEEEec
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ-KAVNVVRFSPNGELLASGDDVGKEIWYLT 110 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~l~~spdg~~las~~d~~v~iw~~~ 110 (621)
+|++++.++.|. +||..+++.... +..+. ..+.++.++|+|++|+ +.++.|..|+.
T Consensus 7 ~lv~~~~~~~v~--------------~~d~~tG~~~w~-------~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~- 63 (276)
T 3no2_A 7 LLVGGSGWNKIA--------------IINKDTKEIVWE-------YPLEKGWECNSVAATKAGEILF-SYSKGAKMITR- 63 (276)
T ss_dssp EEEECTTCSEEE--------------EEETTTTEEEEE-------EECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-
T ss_pred EEEeeCCCCEEE--------------EEECCCCeEEEE-------eCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-
Confidence 999999999999 666655544322 33333 4688999999999999 45777888887
Q ss_pred cCccccccceeccccccc-CCCeEEEEECCCCCEEEEEeC-CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeee
Q psy15549 111 ERESGIANVEFASDLSRH-QKAVNVVRFSPNGELLASGDD-ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL 188 (621)
Q Consensus 111 ~~~~~~~~~~~~~~~~~h-~~~V~~i~~sp~g~~l~s~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (621)
.+ +.+..+..+ ...+.++.+.++|++|++.+. ++.|..+|. +++.+..+. .....
T Consensus 64 ~G-------~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~---------------~~~~~ 120 (276)
T 3no2_A 64 DG-------RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTE---------------FETGI 120 (276)
T ss_dssp TS-------CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEE---------------ECCSC
T ss_pred CC-------CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEe---------------ccCCC
Confidence 44 344444443 346888999999999999887 777777775 444332110 00000
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCcee
Q psy15549 189 RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV 268 (621)
Q Consensus 189 ~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 268 (621)
..+......+++.++|+++++...++.|..||.. |+.+..+... ..+.++.+.++|+.+++++.++.|..+|..+++.
T Consensus 121 ~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 121 ERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp SSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred CcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 1222234566789999999999999999999987 9999888654 3456778899999999888888999999999999
Q ss_pred eeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 269 ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
+.++.....+- ..-..+..++..++|..+++..
T Consensus 199 ~w~~~~~~~~~-----------------~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 199 VRRVNANDIEG-----------------VQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEGGGSBS-----------------CCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEecCCCCCC-----------------ccccccccceEcCCCCEEEEec
Confidence 88775321110 0012357788888888887754
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.4e-13 Score=128.12 Aligned_cols=237 Identities=8% Similarity=0.016 Sum_probs=160.0
Q ss_pred CeEEEeccccccCCcceEEE-EecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIV-TGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~-tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
...++++++++. +++ +...++.|. +|+......... ...+...+.+++++++|
T Consensus 25 ~p~~i~~~~~g~-----l~v~~~~~~~~i~--------------~~~~~~~~~~~~-------~~~~~~~p~~i~~~~~g 78 (270)
T 1rwi_B 25 SPSGVAVDSAGN-----VYVTSEGMYGRVV--------------KLATGSTGTTVL-------PFNGLYQPQGLAVDGAG 78 (270)
T ss_dssp CEEEEEECTTCC-----EEEEECSSSCEEE--------------EECC-----EEC-------CCCSCCSCCCEEECTTC
T ss_pred CccceEECCCCC-----EEEEccCCCCcEE--------------EecCCCcccceE-------eeCCcCCcceeEECCCC
Confidence 678999999997 777 557788888 666543322110 12233567889999999
Q ss_pred CEEEEEcCCceEEEEeccCccccccceeccccc-ccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 94 ELLASGDDVGKEIWYLTERESGIANVEFASDLS-RHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
+++++..++.|.+|+..... ...+. .....+..++++++|+++++...++.|.+|+..+....
T Consensus 79 ~l~v~~~~~~i~~~d~~~~~--------~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-------- 142 (270)
T 1rwi_B 79 TVYVTDFNNRVVTLAAGSNN--------QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-------- 142 (270)
T ss_dssp CEEEEETTTEEEEECTTCSC--------CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE--------
T ss_pred CEEEEcCCCEEEEEeCCCce--------EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE--------
Confidence 97777667778888866531 11111 22356889999999998887777889999975443321
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEE
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATL 252 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~ 252 (621)
.........+.+++++++|+++++...++.|.+||............+...+.+++++++|..+++.
T Consensus 143 -------------~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 143 -------------VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp -------------ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEE
T ss_pred -------------eeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEE
Confidence 1112233457889999999977777778899999987766544333344668899999999777766
Q ss_pred eCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCccee
Q psy15549 253 SSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPIS 332 (621)
Q Consensus 253 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~ 332 (621)
..++.|.+|+........... .....+.+++++++|+.+++.. .++.+.+++
T Consensus 210 ~~~~~v~~~~~~~~~~~~~~~-----------------------~~~~~p~~i~~~~~g~l~v~~~-----~~~~v~~~~ 261 (270)
T 1rwi_B 210 HNTNQVVKLLAGSTTSTVLPF-----------------------TGLNTPLAVAVDSDRTVYVADR-----GNDRVVKLT 261 (270)
T ss_dssp TTTSCEEEECTTCSCCEECCC-----------------------CSCSCEEEEEECTTCCEEEEEG-----GGTEEEEEC
T ss_pred CCCCcEEEEcCCCCcceeecc-----------------------CCCCCceeEEECCCCCEEEEEC-----CCCEEEEEc
Confidence 678899999986543322110 0112458899999998777666 567777776
Q ss_pred ee
Q psy15549 333 VT 334 (621)
Q Consensus 333 ~~ 334 (621)
..
T Consensus 262 ~~ 263 (270)
T 1rwi_B 262 SL 263 (270)
T ss_dssp CC
T ss_pred CC
Confidence 54
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-13 Score=151.10 Aligned_cols=285 Identities=13% Similarity=0.081 Sum_probs=179.0
Q ss_pred EccCCCEEEEEc-CCc---eEEEEeccC---ccccccceec-ccccccCCCeEEEEECCCCCEEEEEeCC-----CcEEE
Q psy15549 89 FSPNGELLASGD-DVG---KEIWYLTER---ESGIANVEFA-SDLSRHQKAVNVVRFSPNGELLASGDDE-----STIIV 155 (621)
Q Consensus 89 ~spdg~~las~~-d~~---v~iw~~~~~---~~~~~~~~~~-~~~~~h~~~V~~i~~sp~g~~l~s~s~d-----g~i~v 155 (621)
.+|+|++++... +++ ..+|..... +.....+.-. ..-.+|...+..++|||||++||.++.+ ..|++
T Consensus 114 p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 114 PQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 348999988765 333 677877643 2111111000 1112344578899999999999887643 36999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCe--------------EEEEEC
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNT--------------AIMWDV 221 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~--------------i~vwd~ 221 (621)
||+.+++.+. ...+...+..++|+|| +.|+.++.++. |++|++
T Consensus 194 ~dl~tg~~~~----------------------~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~l 250 (741)
T 1yr2_A 194 VGVADGKPLA----------------------DELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRL 250 (741)
T ss_dssp EETTTCCEEE----------------------EEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEET
T ss_pred EECCCCCCCC----------------------ccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEEC
Confidence 9999887421 1111112357899999 98988876554 899999
Q ss_pred CCCc----EEEEeccCCcceEEEEEcCCCCEEEEEeCCC-----cEEEEEccCcee--eeecccCCCCCCCccccccccc
Q psy15549 222 HKGK----NLGILTEHKKFVQGVAWDPKNQYVATLSSDR-----SLRTYSIQSKKV--ISRACRSKLPVDSSHELFDKVV 290 (621)
Q Consensus 222 ~~~~----~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg-----~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 290 (621)
.++. .+.....+...+..+.|+|||++|+..+.++ .|++||+.++.. ...+....
T Consensus 251 gt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-------------- 316 (741)
T 1yr2_A 251 GTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL-------------- 316 (741)
T ss_dssp TSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS--------------
T ss_pred CCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC--------------
Confidence 8765 2222223334588999999999998877554 799999877621 22221110
Q ss_pred cccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCC
Q psy15549 291 PLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKP 370 (621)
Q Consensus 291 ~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (621)
...... ++|+|+.|+..+. +
T Consensus 317 ---------~~~~~~-~~~dg~~l~~~s~-----~--------------------------------------------- 336 (741)
T 1yr2_A 317 ---------KAQWDF-VDGVGDQLWFVSG-----D--------------------------------------------- 336 (741)
T ss_dssp ---------SSCEEE-EEEETTEEEEEEC-----T---------------------------------------------
T ss_pred ---------CceEEE-EeccCCEEEEEEC-----C---------------------------------------------
Confidence 011222 3477777766541 0
Q ss_pred CCCCCCccCCCcEEEEEEcCCcEEEEeCCCC-ceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec-CCcCCc
Q psy15549 371 SDDKPLFKLPYRIVIAVATENNILLYDTQHA-SPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG-DNEIGI 448 (621)
Q Consensus 371 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~-~~~~~~ 448 (621)
.+.++.|++||+.++ .....+...+...+.+++|+ ++.++++...||..+||.++ ++....
T Consensus 337 ----------------~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~ 399 (741)
T 1yr2_A 337 ----------------GAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAG 399 (741)
T ss_dssp ----------------TCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred ----------------CCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCcee
Confidence 012456888998775 23344434455567788887 56678888899998888776 455445
Q ss_pred ccCCC-CCcccccCCCCCCCCcc----cCCCcccHHHhcccCcc
Q psy15549 449 PYVPP-SGEESKENDPTKGEPVR----SEDKPRSAEQAKGEGKV 487 (621)
Q Consensus 449 ~~~~~-~~~~~~~~~~~~~~~~~----s~~~~~~~~~w~~~~~~ 487 (621)
.+..+ .+.+..+.+++++..++ +...++.++.|++....
T Consensus 400 ~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 400 AVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp ECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred eccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 55543 44566677888888776 66788999999876543
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.56 E-value=2e-11 Score=117.71 Aligned_cols=199 Identities=8% Similarity=-0.054 Sum_probs=137.6
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
...+.+|++++++. ++++...++.|. +|+.. +.... + .+..+...+.++++.++
T Consensus 19 ~~~p~~i~~d~~g~-----l~v~~~~~~~v~--------------~~~~~-~~~~~--~----~~~~~~~~~~~i~~~~~ 72 (300)
T 2qc5_A 19 DSGPYGITSSEDGK-----VWFTQHKANKIS--------------SLDQS-GRIKE--F----EVPTPDAKVMCLIVSSL 72 (300)
T ss_dssp TCCEEEEEECTTSC-----EEEEETTTTEEE--------------EECTT-SCEEE--E----ECSSTTCCEEEEEECTT
T ss_pred CCCcceeeECCCCC-----EEEEcCCCCeEE--------------EECCC-CceEE--E----ECCCCCCcceeEEECCC
Confidence 45789999999997 777777788888 66654 22111 0 12233467899999999
Q ss_pred CCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 93 GELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 93 g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
|+++++.. ++.|..|+.. +.. . ...+......+.++++.++|+++++...++.|..|+.. ++..
T Consensus 73 g~l~v~~~~~~~v~~~d~~-g~~-----~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~------- 137 (300)
T 2qc5_A 73 GDIWFTENGANKIGKLSKK-GGF-----T-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY------- 137 (300)
T ss_dssp SCEEEEETTTTEEEEECTT-SCE-----E-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-------
T ss_pred CCEEEEecCCCeEEEECCC-CCe-----E-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-------
Confidence 99888776 6678888766 321 1 11122234578999999999888877778889999876 4321
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE-eccCCcceEEEEEcCCCCEEE
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI-LTEHKKFVQGVAWDPKNQYVA 250 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~v~~l~~sp~~~~l~ 250 (621)
...+......+.++++.++++++++...++.|..||. +++.... ...+...+.+++++++|+.++
T Consensus 138 -------------~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v 203 (300)
T 2qc5_A 138 -------------EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWF 203 (300)
T ss_dssp -------------EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEE
T ss_pred -------------EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEE
Confidence 0112234567899999999997766666789999998 5654432 223445688999999998777
Q ss_pred EEeCCCcEEEEEccCce
Q psy15549 251 TLSSDRSLRTYSIQSKK 267 (621)
Q Consensus 251 s~~~dg~i~iwd~~~~~ 267 (621)
+....+.|.+|+. +++
T Consensus 204 ~~~~~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 204 VEIMGNKIGRITT-TGE 219 (300)
T ss_dssp EETTTTEEEEECT-TCC
T ss_pred EccCCCEEEEEcC-CCc
Confidence 6656778999998 444
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-12 Score=122.80 Aligned_cols=231 Identities=12% Similarity=0.096 Sum_probs=161.5
Q ss_pred CCCEEEEEc-CCceEEEEeccCccccccceecccccccC-CCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 92 NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQ-KAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 92 dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
.+++|++++ ++.|.+||..++ +.+..+..+. ..+.++.++|+|++|+ +.++.|..||. +++.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG-------~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~----- 68 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK-------EIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGREL----- 68 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT-------EEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEE-----
T ss_pred CCcEEEeeCCCCEEEEEECCCC-------eEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEE-----
Confidence 457788877 888999998777 5566666655 4688999999999888 34678999998 66643
Q ss_pred CCcccccccccceeeeeeecC-CCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEEEecc------CCcceEEEE
Q psy15549 170 SNLDEENVNKEHWIVTKILRG-HLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLGILTE------HKKFVQGVA 241 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~------~~~~v~~l~ 241 (621)
..+.. ....+.++.+.++|+++++.+. ++.|..+|. +|+.+..+.. +......++
T Consensus 69 ----------------W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 69 ----------------WNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQIN 131 (276)
T ss_dssp ----------------EEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCE
T ss_pred ----------------EEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCce
Confidence 22222 2346889999999999999887 778888885 7877766642 222455677
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccc
Q psy15549 242 WDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCL 321 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~ 321 (621)
+.++|+++++...++.|.+||.. ++.+..+.... ...++.+.++|+.+++..
T Consensus 132 ~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~------------------------~~~~~~~~~~g~~~v~~~--- 183 (276)
T 3no2_A 132 KNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG------------------------TPFSSAFLDNGDCLVACG--- 183 (276)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS------------------------CCCEEEECTTSCEEEECB---
T ss_pred ECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC------------------------CccceeEcCCCCEEEEeC---
Confidence 89999999999999999999997 88877764221 123455556666555433
Q ss_pred cCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC
Q psy15549 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA 401 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 401 (621)
.++.|..+|..++
T Consensus 184 -------------------------------------------------------------------~~~~v~~~d~~tG 196 (276)
T 3no2_A 184 -------------------------------------------------------------------DAHCFVQLNLESN 196 (276)
T ss_dssp -------------------------------------------------------------------TTSEEEEECTTTC
T ss_pred -------------------------------------------------------------------CCCeEEEEeCcCC
Confidence 4567888888888
Q ss_pred ceeEEEecc-----cccceEEEEEcCCCCeEEEEeCC--------CcEEEEEec-CCcCCcc
Q psy15549 402 SPFAFIANI-----HYTKLTDITWSSDGKVLIASSTD--------GYCSIISFG-DNEIGIP 449 (621)
Q Consensus 402 ~~~~~~~~~-----h~~~v~~~~~spdg~~l~s~s~d--------g~i~iw~~~-~~~~~~~ 449 (621)
+.+..+... ....+..++..++|..+++.... +..+++.+. +|+++-.
T Consensus 197 ~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~ 258 (276)
T 3no2_A 197 RIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQ 258 (276)
T ss_dssp CEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEE
T ss_pred cEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEE
Confidence 877777421 11237888899999888876311 234566663 4554333
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=3.1e-11 Score=125.77 Aligned_cols=300 Identities=13% Similarity=0.017 Sum_probs=188.2
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEec--cccccccceeeccccccccCcEEEEEEc-
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLT--ERESGIANVEFASDLSRHQKAVNVVRFS- 90 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~--~~~~~~~~~~~~~~~~~h~~~V~~l~~s- 90 (621)
..+..++|+|||+ +|++++.++.|. +||+. +.+.. ..+... .....++|+
T Consensus 197 ~~p~~v~~SpDGr-----~lyv~~~dg~V~--------------viD~~~~t~~~v-------~~i~~G-~~P~~ia~s~ 249 (567)
T 1qks_A 197 YAVHISRLSASGR-----YLFVIGRDGKVN--------------MIDLWMKEPTTV-------AEIKIG-SEARSIETSK 249 (567)
T ss_dssp SCEEEEEECTTSC-----EEEEEETTSEEE--------------EEETTSSSCCEE-------EEEECC-SEEEEEEECC
T ss_pred CCccceEECCCCC-----EEEEEcCCCeEE--------------EEECCCCCCcEe-------EEEecC-CCCceeEEcc
Confidence 3577999999998 999999999999 77764 32221 123322 245789999
Q ss_pred ---cCCCEEEEEc--CCceEEEEeccCccccccceeccccc----------ccCC-CeEEEEECCCCC-EEEEEeCCCcE
Q psy15549 91 ---PNGELLASGD--DVGKEIWYLTERESGIANVEFASDLS----------RHQK-AVNVVRFSPNGE-LLASGDDESTI 153 (621)
Q Consensus 91 ---pdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~----------~h~~-~V~~i~~sp~g~-~l~s~s~dg~i 153 (621)
|||++++++. .+.+.++|..+. +.+..+. .|.. .+..+.+++++. +++....+|.|
T Consensus 250 ~~~pDGk~l~v~n~~~~~v~ViD~~t~-------~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 250 MEGWEDKYAIAGAYWPPQYVIMDGETL-------EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp STTCTTTEEEEEEEETTEEEEEETTTC-------CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ccCCCCCEEEEEEccCCeEEEEECCCC-------cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 6999999877 788999997654 2222221 1223 678889998766 44555677999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCcEEEEecc
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~ 232 (621)
.++|......+. ............+.|+|++++|+++. .++.|.++|+.+++.+..+..
T Consensus 323 ~~vd~~~~~~~~--------------------v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 323 LLVDYTDLNNLK--------------------TTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEETTCSSEEE--------------------EEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred EEEecCCCccce--------------------eeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 999987654210 11112344577899999999987766 478999999999987766643
Q ss_pred -----CCcceEEEEEcCCCCEEE-EEe-CCCcEEEEEccC-------ceeeeecccCCCCCCCccccccccccccccCCc
Q psy15549 233 -----HKKFVQGVAWDPKNQYVA-TLS-SDRSLRTYSIQS-------KKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298 (621)
Q Consensus 233 -----~~~~v~~l~~sp~~~~l~-s~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (621)
|.+.-..+ ++|++..+. +.. .++.|.++|..+ .+.++.+....
T Consensus 383 gg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g---------------------- 439 (567)
T 1qks_A 383 GGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG---------------------- 439 (567)
T ss_dssp SSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC----------------------
T ss_pred cCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC----------------------
Confidence 32212122 588755544 443 468999999987 44455443211
Q ss_pred ccceeeeeecCCCCeEEeccccccC--CCCCCcceeeeeeeeecccCCCceec--------CCcccceeeeeccceeeec
Q psy15549 299 KSFFRRLTFSPDGQLLIAPSGCLEN--SDSTRKPISVTHVFTRACLNKPAVCL--------PSLQYYSVAVKCCPVLFEL 368 (621)
Q Consensus 299 ~~~i~~~~~spdg~~l~~~s~~~~~--~d~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 368 (621)
..-..+..+|+++++.+....... ...++.++++...... ........+ ......+..+.|+|
T Consensus 440 -~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 512 (567)
T 1qks_A 440 -GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGD-GSDPEFKTLPIAEWAGITEGQPRVVQGEFNK----- 512 (567)
T ss_dssp -SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCS-SSCCCEEEECHHHHHTCCSSCCEEEEEEECT-----
T ss_pred -CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCccccc-ccCCCcEEeccccccccCCCCcceEeeeECC-----
Confidence 011347789999999886511000 0346677766532000 000111111 11123445555555
Q ss_pred CCCCCCCCccCCCcEEEEEEc-----CCcEEEEeCCCCceeEEEe
Q psy15549 369 KPSDDKPLFKLPYRIVIAVAT-----ENNILLYDTQHASPFAFIA 408 (621)
Q Consensus 369 ~~~~~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~ 408 (621)
+|..+.++.. ++.|.++|..+.+.+..+.
T Consensus 513 -----------~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 513 -----------DGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp -----------TSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred -----------CCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 6777766632 6899999999999888875
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.52 E-value=6.4e-12 Score=122.62 Aligned_cols=302 Identities=11% Similarity=0.024 Sum_probs=183.3
Q ss_pred EEEccCCCEEEEEc------CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe----------CC
Q psy15549 87 VRFSPNGELLASGD------DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD----------DE 150 (621)
Q Consensus 87 l~~spdg~~las~~------d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s----------~d 150 (621)
....|+++.+.+.. ++.|.++|..+. +.+..+.....+ .++++|||++++++. .+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~-------~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG-------RVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT-------EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCC-------eEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCC
Confidence 34578998888764 346888888766 555555544444 499999999887765 36
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecC-----CCCCeEEEEECCCCCEEEEEeC--CCeEEEEECCC
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRG-----HLEDVYDISWSPTSTHLISGSV--DNTAIMWDVHK 223 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~i~~spd~~~l~s~~~--dg~i~vwd~~~ 223 (621)
+.|.+||..+.+.+..++ +.. .......+.|+|||++|+++.. ++.|.++|+.+
T Consensus 109 ~~VsviD~~t~~v~~~I~-------------------v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t 169 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIE-------------------LPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG 169 (386)
T ss_dssp EEEEEECTTTCCEEEEEE-------------------ETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred CEEEEEECCCCeEEEEEE-------------------CCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCC
Confidence 789999999987543220 110 1224567999999999998874 68999999999
Q ss_pred CcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccC-ceeeeecccCCCCCCCccccccccccccccCCcccce
Q psy15549 224 GKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQS-KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFF 302 (621)
Q Consensus 224 ~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 302 (621)
++.+.++.... . ...+....+.+++.+.||.+.+.++.+ ++...... . .+.. .. ....
T Consensus 170 ~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~-~--~~~~------~~---------~~~~ 228 (386)
T 3sjl_D 170 KAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT-E--VFHP------ED---------EFLI 228 (386)
T ss_dssp TEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEEC-C--CCSC------TT---------SCBC
T ss_pred CcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeec-c--eecc------cc---------cccc
Confidence 99998885322 1 223333456777888899999999876 55432111 0 0000 00 0001
Q ss_pred eeeeec-CCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCC-CCCccCC
Q psy15549 303 RRLTFS-PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDD-KPLFKLP 380 (621)
Q Consensus 303 ~~~~~s-pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 380 (621)
....|. ++|+++++. .++.+.+.+...... ....+...+. .. .....|.| .+. ...+..+
T Consensus 229 ~~~~~~~~dG~~~~vs------~~g~V~v~d~~~~~~--~v~~~~~~~~-~~--~~~~g~~p-------~g~q~~a~~~~ 290 (386)
T 3sjl_D 229 NHPAYSQKAGRLVWPT------YTGKIHQIDLSSGDA--KFLPAVEALT-EA--ERADGWRP-------GGWQQVAYHRA 290 (386)
T ss_dssp SCCEEETTTTEEEEEB------TTSEEEEEECTTSSC--EECCCEESSC-HH--HHHTTEEE-------CSSSCEEEETT
T ss_pred ccceeEcCCCcEEEEe------CCCEEEEEECCCCcc--eeecceeccc-cc--cccccccC-------CCcceeeECCC
Confidence 223553 677655433 345555554321000 0000000000 00 00000111 000 0111224
Q ss_pred CcEEEEEEc----------CCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEE-eCCCcEEEEEecCCcCCc
Q psy15549 381 YRIVIAVAT----------ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIAS-STDGYCSIISFGDNEIGI 448 (621)
Q Consensus 381 ~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~-s~dg~i~iw~~~~~~~~~ 448 (621)
++.+++... .+.|.++|+.+++.+..+..++ .+.+|++++|++ +|+++ ..++.|.++|..+++.+.
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~--~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC--CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 555655542 2579999999999999987543 788999999997 66665 458999999999999988
Q ss_pred ccCCCCCcc
Q psy15549 449 PYVPPSGEE 457 (621)
Q Consensus 449 ~~~~~~~~~ 457 (621)
.+.......
T Consensus 369 ~i~~~~~p~ 377 (386)
T 3sjl_D 369 SVNQLGHGP 377 (386)
T ss_dssp EECCCCSSC
T ss_pred EecCCCCCc
Confidence 887765443
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.50 E-value=4.7e-13 Score=131.24 Aligned_cols=179 Identities=13% Similarity=0.065 Sum_probs=135.2
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccc----cceeeccccccccCcEEEEEEc
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGI----ANVEFASDLSRHQKAVNVVRFS 90 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~----~~~~~~~~~~~h~~~V~~l~~s 90 (621)
++..+++++... ++++|+.++.+ +|++....... ...+.. ....+.. |+.|+|
T Consensus 39 ~~nlLais~~~g-----ll~a~~~~~l~---------------v~~~~~l~~~~~~~~~~~~~~-~~~~lp~-V~~l~f- 95 (388)
T 1xip_A 39 SLQNLDISNSKS-----LFVAASGSKAV---------------VGELQLLRDHITSDSTPLTFK-WEKEIPD-VIFVCF- 95 (388)
T ss_dssp CCBCEEEETTTT-----EEEEEETTEEE---------------EEEHHHHHHHHHSSSCCCCCS-EEEECTT-EEEEEE-
T ss_pred cccEEEEcCCCC-----EEEEeCCCEEE---------------EEEhhHhhhhhccccccccce-EEeeCCC-eeEEEE-
Confidence 699999999998 99999998766 67655433100 001111 1224556 999999
Q ss_pred cCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 91 PNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 91 pdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
|+++|+++.++.|++|++.... .......|...+.++.+.+.. +++++.||.|.+||+.++...
T Consensus 96 -d~~~L~v~~~~~l~v~dv~sl~-------~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~------ 159 (388)
T 1xip_A 96 -HGDQVLVSTRNALYSLDLEELS-------EFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTK------ 159 (388)
T ss_dssp -ETTEEEEEESSEEEEEESSSTT-------CEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEE------
T ss_pred -CCCEEEEEcCCcEEEEEchhhh-------ccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCccc------
Confidence 9999999988999999998753 222344566778888887653 888999999999999977631
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE--EEEe------c---cCCcceEE
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN--LGIL------T---EHKKFVQG 239 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~--~~~~------~---~~~~~v~~ 239 (621)
.+...|+|++|||+| ++.|..||.+++|+...+.. ..++ . +|...|.+
T Consensus 160 -------------------~~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~s 218 (388)
T 1xip_A 160 -------------------QLAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLS 218 (388)
T ss_dssp -------------------EEEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEE
T ss_pred -------------------cccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEE
Confidence 144589999999999 77899999999999887774 5555 2 37788999
Q ss_pred EEEcCCCCEEEEEe
Q psy15549 240 VAWDPKNQYVATLS 253 (621)
Q Consensus 240 l~~sp~~~~l~s~~ 253 (621)
+.|.+++.+|++-.
T Consensus 219 I~wl~~~~flv~y~ 232 (388)
T 1xip_A 219 VTILSPQDFLAVFG 232 (388)
T ss_dssp EEESSSSEEEEEEE
T ss_pred EEEecCCeEEEEEc
Confidence 99999999988643
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.2e-11 Score=123.04 Aligned_cols=291 Identities=12% Similarity=0.056 Sum_probs=181.1
Q ss_pred cCCCEEEEEc--C----CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe----------CCCcEE
Q psy15549 91 PNGELLASGD--D----VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD----------DESTII 154 (621)
Q Consensus 91 pdg~~las~~--d----~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s----------~dg~i~ 154 (621)
++++.+++.. + +.|.++|..+. +.+..+.....+ .++++|||++|+++. .++.|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~-------~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vs 152 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG-------RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVE 152 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT-------EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC-------EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEE
Confidence 5777666654 2 57899998876 555555544455 899999999888775 367899
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeec--C---CCCCeEEEEECCCCCEEEEEeC--CCeEEEEECCCCcEE
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR--G---HLEDVYDISWSPTSTHLISGSV--DNTAIMWDVHKGKNL 227 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~v~~i~~spd~~~l~s~~~--dg~i~vwd~~~~~~~ 227 (621)
++|..+.+.+..++ +. . .......+.|+|||++|+++.. ++.|.++|+.+++.+
T Consensus 153 viD~~t~~vv~~I~-------------------v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 153 VFDPVTFLPIADIE-------------------LPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EECTTTCCEEEEEE-------------------ETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred EEECCCCcEEEEEE-------------------CCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEE
Confidence 99999987643220 11 0 1233567899999999999875 578999999999988
Q ss_pred EEeccCCcceEEEEEcCCC-CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeee
Q psy15549 228 GILTEHKKFVQGVAWDPKN-QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLT 306 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 306 (621)
..+..... ....|++ +.+++.+.||.+.+.+..+++...... ....+ .. ......+.
T Consensus 214 ~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~-~~~~v----------------~~-~p~~~~~~ 271 (426)
T 3c75_H 214 RMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT-EVFHT----------------ED-ELLINHPA 271 (426)
T ss_dssp EEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC-CCCSC----------------TT-SCBCSCCE
T ss_pred EEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee-eeecc----------------CC-CceeeEee
Confidence 88754221 2334443 556667788888888886655443211 00000 00 00112457
Q ss_pred ecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCC-CCCCccCCCcEEE
Q psy15549 307 FSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSD-DKPLFKLPYRIVI 385 (621)
Q Consensus 307 ~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 385 (621)
|++++..++..+ ..+.+.+.+....... ............. ...+.| .+ ....+.++++.++
T Consensus 272 ~~~dg~~~~~~s-----~~g~V~ViD~~~~~~~--v~~~~~~~~~~~i---~~g~~p-------~g~~~va~s~dg~rly 334 (426)
T 3c75_H 272 FSLRSGRLVWPT-----YTGKIFQADLTAEGAT--FRAPIEALTEAER---ADDWRP-------GGWQQTAYHRQSDRIY 334 (426)
T ss_dssp ECTTTCEEEEEB-----TTSEEEEEEECSSCEE--ECCCEESSCTTTG---GGTEEE-------CSSSCEEEEGGGTEEE
T ss_pred ecCCCCEEEEEe-----CCCcEEEEeccCCceE--Eeeeeeecccccc---cccccc-------CCceeeEEcCCCCEEE
Confidence 788888777766 4555555554211000 0000000000000 000000 00 0012223556655
Q ss_pred EEEc----------CCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEEe-CCCcEEEEEecCCcCCccc
Q psy15549 386 AVAT----------ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIASS-TDGYCSIISFGDNEIGIPY 450 (621)
Q Consensus 386 ~~~~----------dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~s-~dg~i~iw~~~~~~~~~~~ 450 (621)
+... .+.|.++|..+.+.+..+..+. ....++|+|||+ +|+++. .++.|.++|+.+++....+
T Consensus 335 Va~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~--~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 335 LLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH--EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEecccccccccCCCCEEEEEECCCCeEEEEEECCC--CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 5542 3579999999999999986533 588999999999 888887 5999999999999988776
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.48 E-value=6.5e-11 Score=114.09 Aligned_cols=243 Identities=12% Similarity=0.021 Sum_probs=162.1
Q ss_pred ccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy15549 80 HQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~ 158 (621)
....+.++++.++|++.++.. ++.|.+|+.. +.. .. ..+..+...+.++++.++|.++++...++.|..||.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~-----~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI-----KE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSK 90 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-----EE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce-----EE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECC
Confidence 346789999999999888775 7789999876 321 11 112233467899999999988877777788999987
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE-eccCCcce
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI-LTEHKKFV 237 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~v 237 (621)
. ++.. ..........+.++++.++++++++...++.|..||.. ++.... +......+
T Consensus 91 ~-g~~~--------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~ 148 (300)
T 2qc5_A 91 K-GGFT--------------------EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYP 148 (300)
T ss_dssp T-SCEE--------------------EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCE
T ss_pred C-CCeE--------------------EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCc
Confidence 7 4321 01122234678999999999888877768899999987 654422 33345678
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
.+++++++++.+++...++.|..||. +++... +.. ......+..++++++|..+++.
T Consensus 149 ~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~---------------------~~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 149 AFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPL---------------------PTNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EEC---------------------SSTTCCEEEEEECTTSSEEEEE
T ss_pred eeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeC---------------------CCCCCCcceEEECCCCCEEEEc
Confidence 89999999996666555788999988 544332 110 0011234677777777655443
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEe
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYD 397 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 397 (621)
. ..+.|.+||
T Consensus 206 ~----------------------------------------------------------------------~~~~i~~~~ 215 (300)
T 2qc5_A 206 I----------------------------------------------------------------------MGNKIGRIT 215 (300)
T ss_dssp T----------------------------------------------------------------------TTTEEEEEC
T ss_pred c----------------------------------------------------------------------CCCEEEEEc
Confidence 2 234566666
Q ss_pred CCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcC
Q psy15549 398 TQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 398 ~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~ 446 (621)
. +++........+...+.+++++++|+.+++...++.|..|+. ++..
T Consensus 216 ~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~ 262 (300)
T 2qc5_A 216 T-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTI 262 (300)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCE
T ss_pred C-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcE
Confidence 6 333332221224467889999999997777666789999997 4443
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.5e-12 Score=127.68 Aligned_cols=188 Identities=11% Similarity=0.076 Sum_probs=138.1
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccc----cccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESG----IANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~----~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~ 158 (621)
.++.+++++...++++|+.+++++|++...... ...+.... ...+.. |++++| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 689999999999999999889999997654210 00012111 223556 999999 89999999 8899999999
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceE
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ 238 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 238 (621)
.+.... .....|...+.++.+.+. .+++++.||.|.+||+.++.... +...|+
T Consensus 114 ~sl~~~---------------------~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs 166 (388)
T 1xip_A 114 EELSEF---------------------RTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVT 166 (388)
T ss_dssp SSTTCE---------------------EEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEE
T ss_pred hhhhcc---------------------CccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCce
Confidence 887632 334556677888887754 38888999999999999887653 446799
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCcee--eeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKV--ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
|++|||+| ++.|..||.+++|+...+.. ...+.... .+.....+...|.++.|.+++.++++
T Consensus 167 ~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp--------------~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 167 SFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPS--------------ELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCH--------------HHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCc--------------ccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999999 67799999999999887775 44442110 00000123567899999999999886
Q ss_pred cc
Q psy15549 317 PS 318 (621)
Q Consensus 317 ~s 318 (621)
-.
T Consensus 231 y~ 232 (388)
T 1xip_A 231 FG 232 (388)
T ss_dssp EE
T ss_pred Ec
Confidence 44
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-11 Score=120.57 Aligned_cols=244 Identities=10% Similarity=0.090 Sum_probs=157.6
Q ss_pred CCCCeEEEeccccccCCcceEEEE-------ecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVT-------GGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~t-------g~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
.-....+++|++++. ++++ +..++.|. +|+..+++.... . .....++...+
T Consensus 16 ~~~~~~~~~~~~~g~-----l~~~~~~~~~~~~~~~~i~--------------~~d~~~g~~~~~--~-~~~~~~~~~~~ 73 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGD-----FYIVAPEVEVNGKPAGEIL--------------RIDLKTGKKTVI--C-KPEVNGYGGIP 73 (314)
T ss_dssp CCTTCEEEEECTTSC-----EEEEETTCEETTEECCEEE--------------EECTTTCCEEEE--E-CCEETTEECCE
T ss_pred cCCCccCceECCCCC-----EEEEEeccccCCCCCCEEE--------------EEeCCCCcEEEE--E-ecccCCCCCCC
Confidence 344678999999997 7777 66788888 666554432111 0 00112355679
Q ss_pred EEEEEccC-CCEEEEEcCCceEEEEeccCccccccceec-cc-cc-ccCCCeEEEEECCCCCEEEEEeCC----------
Q psy15549 85 NVVRFSPN-GELLASGDDVGKEIWYLTERESGIANVEFA-SD-LS-RHQKAVNVVRFSPNGELLASGDDE---------- 150 (621)
Q Consensus 85 ~~l~~spd-g~~las~~d~~v~iw~~~~~~~~~~~~~~~-~~-~~-~h~~~V~~i~~sp~g~~l~s~s~d---------- 150 (621)
.+++++++ |+++++...+++.+|+.. +.. ... .. .. .....+.+++++++|+++++...+
T Consensus 74 ~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~-----~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~ 147 (314)
T 1pjx_A 74 AGCQCDRDANQLFVADMRLGLLVVQTD-GTF-----EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRS 147 (314)
T ss_dssp EEEEECSSSSEEEEEETTTEEEEEETT-SCE-----EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBT
T ss_pred ceEEEecCCCcEEEEECCCCEEEEeCC-CCE-----EEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccccccc
Confidence 99999999 877777666688889877 421 111 11 11 122458899999999888776654
Q ss_pred -----CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEEC----CCCCEEEEE-eCCCeEEEEE
Q psy15549 151 -----STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS----PTSTHLISG-SVDNTAIMWD 220 (621)
Q Consensus 151 -----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s----pd~~~l~s~-~~dg~i~vwd 220 (621)
+.|..|+.. ++. ..+..+......++|+ |+++.|+.+ ..++.|.+||
T Consensus 148 ~~~~~~~l~~~~~~-g~~----------------------~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~ 204 (314)
T 1pjx_A 148 MQEKFGSIYCFTTD-GQM----------------------IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYD 204 (314)
T ss_dssp TSSSCEEEEEECTT-SCE----------------------EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEE
T ss_pred ccCCCCeEEEECCC-CCE----------------------EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEE
Confidence 456666644 221 1122233456889999 999766555 4678999999
Q ss_pred CC-CCc-----EEEEeccCC-cceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccccccc
Q psy15549 221 VH-KGK-----NLGILTEHK-KFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLF 293 (621)
Q Consensus 221 ~~-~~~-----~~~~~~~~~-~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (621)
+. +++ ....+..+. ..+..++++++|+++++...++.|.+||..+++.+..+..+
T Consensus 205 ~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~------------------ 266 (314)
T 1pjx_A 205 IKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP------------------ 266 (314)
T ss_dssp EEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS------------------
T ss_pred CCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC------------------
Confidence 86 443 223333343 56789999999998887778899999998866654443211
Q ss_pred ccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceee
Q psy15549 294 HDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISV 333 (621)
Q Consensus 294 ~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~ 333 (621)
...+.+++|+++|++|++++. .++.+..++.
T Consensus 267 -----~~~~~~i~~~~dg~~l~v~~~----~~~~l~~~~~ 297 (314)
T 1pjx_A 267 -----FEKPSNLHFKPQTKTIFVTEH----ENNAVWKFEW 297 (314)
T ss_dssp -----SSCEEEEEECTTSSEEEEEET----TTTEEEEEEC
T ss_pred -----CCCceeEEECCCCCEEEEEeC----CCCeEEEEeC
Confidence 134688999999996665542 3445555443
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.45 E-value=5.6e-11 Score=115.46 Aligned_cols=247 Identities=12% Similarity=0.139 Sum_probs=154.7
Q ss_pred cCcEEEEEEccCCCEEEE-------E-cCCceEEEEeccCccccccceecc--cccccCCCeEEEEECCC-CCEEEEEeC
Q psy15549 81 QKAVNVVRFSPNGELLAS-------G-DDVGKEIWYLTERESGIANVEFAS--DLSRHQKAVNVVRFSPN-GELLASGDD 149 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las-------~-~d~~v~iw~~~~~~~~~~~~~~~~--~~~~h~~~V~~i~~sp~-g~~l~s~s~ 149 (621)
-....+++|+++|+++++ + .++.|.+|+...+.. .... ...++...+.+++++++ |+++++..
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~-----~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~- 90 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKK-----TVICKPEVNGYGGIPAGCQCDRDANQLFVADM- 90 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCE-----EEEECCEETTEECCEEEEEECSSSSEEEEEET-
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcE-----EEEEecccCCCCCCCceEEEecCCCcEEEEEC-
Confidence 345789999999998888 3 377899998765521 1111 01124567899999999 76555544
Q ss_pred CCcEEEEEccCCCCCCC-CCCCCcccccccccceeeeeeec-CCCCCeEEEEECCCCCEEEEEeCC--------------
Q psy15549 150 ESTIIVWKQKTDQDLPE-FPSSNLDEENVNKEHWIVTKILR-GHLEDVYDISWSPTSTHLISGSVD-------------- 213 (621)
Q Consensus 150 dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~~spd~~~l~s~~~d-------------- 213 (621)
.+.|.+||.. ++.... . .... .....+.+++++++|+++++...+
T Consensus 91 ~~~l~~~d~~-g~~~~~~~------------------~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~ 151 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAK------------------KDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEK 151 (314)
T ss_dssp TTEEEEEETT-SCEEECCS------------------BCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSS
T ss_pred CCCEEEEeCC-CCEEEEEe------------------ccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCC
Confidence 4478999987 542110 0 0000 122457899999999888776654
Q ss_pred -CeEEEEECCCCcEEEEeccCCcceEEEEEc----CCCCEEEEE-eCCCcEEEEEcc-CceeeeecccCCCCCCCccccc
Q psy15549 214 -NTAIMWDVHKGKNLGILTEHKKFVQGVAWD----PKNQYVATL-SSDRSLRTYSIQ-SKKVISRACRSKLPVDSSHELF 286 (621)
Q Consensus 214 -g~i~vwd~~~~~~~~~~~~~~~~v~~l~~s----p~~~~l~s~-~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~ 286 (621)
+.|..|+.. ++..... .+......++|+ |+++.|+.+ ..++.|.+||+. +++.......
T Consensus 152 ~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~------------ 217 (314)
T 1pjx_A 152 FGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVW------------ 217 (314)
T ss_dssp CEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEE------------
T ss_pred CCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEE------------
Confidence 567777765 5543322 333456789999 999766655 457899999986 3432110000
Q ss_pred cccccccccCCcc-cceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeecccee
Q psy15549 287 DKVVPLFHDDTMK-SFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVL 365 (621)
Q Consensus 287 ~~~~~~~~~~~~~-~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (621)
....... .....++++++|+++++
T Consensus 218 ------~~~~~~~~~~p~~i~~d~~G~l~v~------------------------------------------------- 242 (314)
T 1pjx_A 218 ------GHIPGTHEGGADGMDFDEDNNLLVA------------------------------------------------- 242 (314)
T ss_dssp ------EECCCCSSCEEEEEEEBTTCCEEEE-------------------------------------------------
T ss_pred ------EECCCCCCCCCCceEECCCCCEEEE-------------------------------------------------
Confidence 0000000 22345666666654443
Q ss_pred eecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEE-EEeCCCcEEEEEecC
Q psy15549 366 FELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLI-ASSTDGYCSIISFGD 443 (621)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~-s~s~dg~i~iw~~~~ 443 (621)
...++.|.+||..+++.+..+. .+...+.+++|+|+|+.|. +...++.|..|++..
T Consensus 243 ---------------------~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 243 ---------------------NWGSSHIEVFGPDGGQPKMRIR-CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp ---------------------EETTTEEEEECTTCBSCSEEEE-CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ---------------------EcCCCEEEEEcCCCCcEeEEEe-CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 2346788899988777666653 3557899999999999555 445668899999874
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.43 E-value=7.4e-11 Score=113.56 Aligned_cols=232 Identities=11% Similarity=0.078 Sum_probs=154.5
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
..+..--.+..|+|++. .++++...++.|. .|+..++... .......+.++++
T Consensus 9 ~~~~~~~Egp~w~~~~~----~l~~~d~~~~~i~--------------~~d~~~~~~~---------~~~~~~~~~~i~~ 61 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSN----SLLFVDIPAKKVC--------------RWDSFTKQVQ---------RVTMDAPVSSVAL 61 (297)
T ss_dssp CCCCSBEEEEEEETTTT----EEEEEETTTTEEE--------------EEETTTCCEE---------EEECSSCEEEEEE
T ss_pred ccCCccccCCeEECCCC----EEEEEECCCCEEE--------------EEECCCCcEE---------EEeCCCceEEEEE
Confidence 33444667899999654 3777777888998 7777655321 1123467999999
Q ss_pred ccCCCEEEEEcCCceEEEEeccCccccccceeccccc--ccCCCeEEEEECCCCCEEEEEeCC---------CcEEEEEc
Q psy15549 90 SPNGELLASGDDVGKEIWYLTERESGIANVEFASDLS--RHQKAVNVVRFSPNGELLASGDDE---------STIIVWKQ 158 (621)
Q Consensus 90 spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~--~h~~~V~~i~~sp~g~~l~s~s~d---------g~i~vwd~ 158 (621)
+++|+++++ .+++|.+|+...+.. ..+.... .....++.++++|+|+++++.... ..-.||.+
T Consensus 62 ~~dG~l~v~-~~~~l~~~d~~~g~~-----~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~ 135 (297)
T 3g4e_A 62 RQSGGYVAT-IGTKFCALNWKEQSA-----VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSL 135 (297)
T ss_dssp BTTSSEEEE-ETTEEEEEETTTTEE-----EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEE
T ss_pred CCCCCEEEE-ECCeEEEEECCCCcE-----EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEE
Confidence 999996555 477899998876521 2121111 122457899999999977654321 33456665
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEE-EeCCCeEEEEEC--CCCcE-----EEEe
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLIS-GSVDNTAIMWDV--HKGKN-----LGIL 230 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s-~~~dg~i~vwd~--~~~~~-----~~~~ 230 (621)
...... ..+..+......++|+||++.|+. .+.++.|.+|++ .++.. ...+
T Consensus 136 d~~g~~---------------------~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~ 194 (297)
T 3g4e_A 136 FPDHHV---------------------KKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKL 194 (297)
T ss_dssp CTTSCE---------------------EEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEEC
T ss_pred ECCCCE---------------------EEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEEC
Confidence 533221 112223345688999999987654 455789999997 45543 2223
Q ss_pred ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeec-C
Q psy15549 231 TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS-P 309 (621)
Q Consensus 231 ~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-p 309 (621)
..+...+..++++++|++.++....+.|.+||..+++.+..+..+ ...+++++|. |
T Consensus 195 ~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p-----------------------~~~~t~~~f~g~ 251 (297)
T 3g4e_A 195 EKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP-----------------------VDKTTSCCFGGK 251 (297)
T ss_dssp CGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS-----------------------SSBEEEEEEESG
T ss_pred CCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC-----------------------CCCceEEEEeCC
Confidence 334456789999999988877777888999999888877766422 1246899998 8
Q ss_pred CCCeEEecc
Q psy15549 310 DGQLLIAPS 318 (621)
Q Consensus 310 dg~~l~~~s 318 (621)
+++.|++++
T Consensus 252 d~~~L~vt~ 260 (297)
T 3g4e_A 252 NYSEMYVTC 260 (297)
T ss_dssp GGCEEEEEE
T ss_pred CCCEEEEEc
Confidence 988887766
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.6e-10 Score=114.55 Aligned_cols=275 Identities=8% Similarity=-0.062 Sum_probs=166.6
Q ss_pred EECCCCCEEEEEeC--CC---cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE
Q psy15549 136 RFSPNGELLASGDD--ES---TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG 210 (621)
Q Consensus 136 ~~sp~g~~l~s~s~--dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~ 210 (621)
...|++++++++.. .. .|.+||..+++.+ ..+.....+ .++++|||++|+++
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~---------------------~~i~~g~~p--~i~~spDg~~lyv~ 83 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSIL---------------------GHVNGGFLP--NPVAAHSGSEFALA 83 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEE---------------------EEecCCCCC--CeEECCCCCEEEEE
Confidence 34467777777653 22 7899999888753 222322233 89999999999988
Q ss_pred e----------CCCeEEEEECCCCcEEEEeccC-------CcceEEEEEcCCCCEEEEEeC--CCcEEEEEccCceeeee
Q psy15549 211 S----------VDNTAIMWDVHKGKNLGILTEH-------KKFVQGVAWDPKNQYVATLSS--DRSLRTYSIQSKKVISR 271 (621)
Q Consensus 211 ~----------~dg~i~vwd~~~~~~~~~~~~~-------~~~v~~l~~sp~~~~l~s~~~--dg~i~iwd~~~~~~~~~ 271 (621)
. .++.|.+||..+.+.+..+... ......++|+|||++|+++.. ++.|.++| .+++.+..
T Consensus 84 n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 84 STSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred eccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 6 3678999999998887766432 123458899999999998874 47899999 99888766
Q ss_pred -cccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeE-EeccccccCCCCCCcceeeeeeeeecccCCCceec
Q psy15549 272 -ACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL-IAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCL 349 (621)
Q Consensus 272 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l-~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~ 349 (621)
+... .++.+.|++... ++.+ .|+.+..++. ........... ...
T Consensus 163 ~i~~~---------------------------~~~~~~~~~~~~~~~~~-----~dg~~~~vd~-~g~~~~~~~~~-~~~ 208 (373)
T 2mad_H 163 LLSSP---------------------------TCYHIHPGAPSTFYLLC-----AQGGLAKTDH-AGGAAGAGLVG-AML 208 (373)
T ss_pred EcCCC---------------------------ceEEEEeCCCceEEEEc-----CCCCEEEEEC-CCcEEEEEecc-ccc
Confidence 5311 123344444322 2222 3444444443 11100000000 000
Q ss_pred CCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCce--eEEEec---------ccccceEEE
Q psy15549 350 PSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP--FAFIAN---------IHYTKLTDI 418 (621)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~---------~h~~~v~~~ 418 (621)
........ .+.+..+++.++..+..+.+.+.|+..... +..+.. ........+
T Consensus 209 ~~~~p~~~----------------~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~ 272 (373)
T 2mad_H 209 TAAQNLLT----------------QPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQV 272 (373)
T ss_pred cCCcceee----------------cceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeE
Confidence 00000000 011122334444445778999999876532 222110 011224457
Q ss_pred EEcCCCCeEEEEeC----------CCcEEEEEecCCcCCcccCCCCCcccccCCCCCCC-CcccCC-CcccHHHhcccC
Q psy15549 419 TWSSDGKVLIASST----------DGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGE-PVRSED-KPRSAEQAKGEG 485 (621)
Q Consensus 419 ~~spdg~~l~s~s~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~-~~~~~~~w~~~~ 485 (621)
+++||++.|.++.. ++.|.++|+.+++....+.... ....+.+++||+ .+.... .++.+.+++...
T Consensus 273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 89999998877653 3579999999999888875433 567789999999 666665 578888888654
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.36 E-value=5.3e-10 Score=112.38 Aligned_cols=158 Identities=11% Similarity=-0.003 Sum_probs=104.2
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC--cEEEEEc
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES--TIIVWKQ 158 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg--~i~vwd~ 158 (621)
.....|+|+++|+++++.. ++.|++|+...+ ........ ..... ++|+++++.|+++..++ .|.+|+.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g-------~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN-------KVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTT-------EEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCC-------EEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEc
Confidence 4678999999999777766 677999998765 22222222 22233 89999999998888766 7888887
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeee-cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE----eccC
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKIL-RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI----LTEH 233 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~----~~~~ 233 (621)
........ ...+ ......+.+++++|++..|+++..++.|+.||..++..... ..++
T Consensus 202 ~~~~~~~~------------------~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 202 ASGWAPTR------------------IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp GGTTCEEE------------------EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSC
T ss_pred CCCceeEE------------------eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCC
Confidence 66543110 0111 22456678899999555666677789999999987764332 2222
Q ss_pred Ccce-E-EEEEcCC-CCEEEEEeCCCcEEEEEccCc
Q psy15549 234 KKFV-Q-GVAWDPK-NQYVATLSSDRSLRTYSIQSK 266 (621)
Q Consensus 234 ~~~v-~-~l~~sp~-~~~l~s~~~dg~i~iwd~~~~ 266 (621)
...- . .++|+|+ +.++++-..++.|+.|+....
T Consensus 264 ~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE 299 (409)
T ss_dssp CCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred CCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC
Confidence 2222 3 8999996 444555556788999987543
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.7e-11 Score=118.28 Aligned_cols=284 Identities=12% Similarity=0.052 Sum_probs=165.0
Q ss_pred CcEEEEEEccCCCEEEEEc---CCceEEEEeccCcccccccee-cccccccCCCeEEEEECCCCCEEEEEeC-----CCc
Q psy15549 82 KAVNVVRFSPNGELLASGD---DVGKEIWYLTERESGIANVEF-ASDLSRHQKAVNVVRFSPNGELLASGDD-----EST 152 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~---d~~v~iw~~~~~~~~~~~~~~-~~~~~~h~~~V~~i~~sp~g~~l~s~s~-----dg~ 152 (621)
..+..++++++|+++++.. ++.+.||.+..+. ...+.. ......|...+..++++++++++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~--~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG--LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE--EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC--eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 6789999999999998864 2336777776321 110000 0122345678999999999876665433 578
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEE-EEEe---CCCeEEEEECCCCcEEE
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL-ISGS---VDNTAIMWDVHKGKNLG 228 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l-~s~~---~dg~i~vwd~~~~~~~~ 228 (621)
|.+||+.+++.+..+... .....+...+..+++++++..+ ++-. .++.|.+||+.+++...
T Consensus 95 i~~~d~~tg~~~~~~~~~---------------~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLP---------------PPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp EEEEETTTTEEEEEEECC---------------TTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE
T ss_pred EEEEECCCCeEEEEEECC---------------hhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE
Confidence 999999887643221000 0001233456889999865454 4444 57899999999888777
Q ss_pred EeccCCcceE-EEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 229 ILTEHKKFVQ-GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 229 ~~~~~~~~v~-~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
.+..|..... ...+.++|..+.+.+.++.++.|.. .+..++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~-------------------------------------~~~gia~ 202 (343)
T 2qe8_A 160 VLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHL-------------------------------------GVNGIVL 202 (343)
T ss_dssp ECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCC-------------------------------------CEEEEEE
T ss_pred EecCCCcccccccceeECCEEEEeccCCCceeceec-------------------------------------ccceeEe
Confidence 6655422110 1345556777777778887765532 1267999
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
+|||+.|+++. ..+. ++|.+................. .+.... ........++..++..+++.
T Consensus 203 s~dg~~ly~~~-----~~~~-~l~~~~~~~~~~~~~~~~~~~~----~~~~~g-------~~g~pdgia~d~~G~l~va~ 265 (343)
T 2qe8_A 203 DAENEWLYLSP-----MHST-SMYRIKSADLSNLQLTDAELGS----KIERYS-------EKPICDGISIDKDHNIYVGD 265 (343)
T ss_dssp CTTSCEEEEEE-----SSCS-EEEEEEHHHHTCTTCCHHHHHT----TCEEEE-------ECCSCSCEEECTTCCEEEEE
T ss_pred ccCCCEEEEEe-----CCCC-eEEEEEHHHhcCCCCChhhhhc----ceEecc-------cCCCCceEEECCCCCEEEEc
Confidence 99999888876 3332 4444431100000000000000 000000 00001112334466777777
Q ss_pred EcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcE
Q psy15549 388 ATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYC 436 (621)
Q Consensus 388 ~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i 436 (621)
..++.|.+||..+++........+...+++++|.++|+++++.+..+.+
T Consensus 266 ~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 266 LAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp GGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred cCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 7789999999866654333322234568999999999888877654443
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.34 E-value=3.6e-10 Score=108.69 Aligned_cols=230 Identities=10% Similarity=0.042 Sum_probs=139.2
Q ss_pred CCeEEEEECCCC-CEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE
Q psy15549 130 KAVNVVRFSPNG-ELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 130 ~~V~~i~~sp~g-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~ 208 (621)
.-.-+..|++++ .++++...++.|..||..++.. .. ......+.+++++++|++++
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~----------------------~~-~~~~~~~~~i~~~~dG~l~v 69 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV----------------------QR-VTMDAPVSSVALRQSGGYVA 69 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE----------------------EE-EECSSCEEEEEEBTTSSEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE----------------------EE-EeCCCceEEEEECCCCCEEE
Confidence 345678999954 4566666788999999887652 11 12346789999999999555
Q ss_pred EEeCCCeEEEEECCCCcEEEEecc----CCcceEEEEEcCCCCEEEEEeCC---------CcEEEEEccC-ceeeeeccc
Q psy15549 209 SGSVDNTAIMWDVHKGKNLGILTE----HKKFVQGVAWDPKNQYVATLSSD---------RSLRTYSIQS-KKVISRACR 274 (621)
Q Consensus 209 s~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~l~~sp~~~~l~s~~~d---------g~i~iwd~~~-~~~~~~~~~ 274 (621)
+ . ++.|.+||..+++....... ....+..++++|+|+++++.... ..-.+|.+.. ++......
T Consensus 70 ~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~- 146 (297)
T 3g4e_A 70 T-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD- 146 (297)
T ss_dssp E-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE-
T ss_pred E-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee-
Confidence 4 4 56899999988765433221 12457889999999976654322 2335555443 22211110
Q ss_pred CCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeee--eeeeecccCCCceecCCc
Q psy15549 275 SKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVT--HVFTRACLNKPAVCLPSL 352 (621)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~--~~~~~~~~~~~~~~~~~~ 352 (621)
.......++|+||++.|+++.. ..+.+..|++. ...... ......+...
T Consensus 147 -----------------------~~~~pngi~~spdg~~lyv~~~----~~~~i~~~~~d~~~G~~~~--~~~~~~~~~~ 197 (297)
T 3g4e_A 147 -----------------------QVDISNGLDWSLDHKIFYYIDS----LSYSVDAFDYDLQTGQISN--RRSVYKLEKE 197 (297)
T ss_dssp -----------------------EESBEEEEEECTTSCEEEEEEG----GGTEEEEEEECTTTCCEEE--EEEEEECCGG
T ss_pred -----------------------ccccccceEEcCCCCEEEEecC----CCCcEEEEeccCCCCcccC--cEEEEECCCC
Confidence 0112368999999998766542 34556666542 000000 0000001111
Q ss_pred ccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEc-CCCCeEEEEe
Q psy15549 353 QYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWS-SDGKVLIASS 431 (621)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~s-pdg~~l~s~s 431 (621)
......+.+ ..++...++....+.|..||..+++.+..+.. +...+++++|. ||++.|..++
T Consensus 198 ~~~p~g~~~----------------d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~-p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 198 EQIPDGMCI----------------DAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL-PVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp GCEEEEEEE----------------BTTSCEEEEEETTTEEEEECTTTCCEEEEEEC-SSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCCeeEE----------------CCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC-CCCCceEEEEeCCCCCEEEEEc
Confidence 111222222 23566666666778899999999998888753 55689999998 8988766554
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.9e-10 Score=109.87 Aligned_cols=161 Identities=11% Similarity=0.036 Sum_probs=107.5
Q ss_pred cccccCcEEEEEEccCCCEE-EEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEE
Q psy15549 77 LSRHQKAVNVVRFSPNGELL-ASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTII 154 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~l-as~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~ 154 (621)
+..+........|+|+|+.| +++. ++.|..|+.. +. ...+..+...+..++++++|+++++...++.|.
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~--------~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT--------VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC--------EEEEEESCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC--------EEEEeCCCCccceeeECCCCCEEEEECCCCEEE
Confidence 33445567889999999954 4444 6778888763 21 223334566789999999999777666667899
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecC-CCCCeEEEEECCCCCEEEE----EeC-------------CCeE
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRG-HLEDVYDISWSPTSTHLIS----GSV-------------DNTA 216 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~spd~~~l~s----~~~-------------dg~i 216 (621)
+|+.. ++.. .+ .....+ ....+..+++.|+|+++++ |.. .+.|
T Consensus 111 ~~~~~-g~~~-~~-----------------~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v 171 (305)
T 3dr2_A 111 RSDAD-GQAH-LL-----------------VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSV 171 (305)
T ss_dssp EECTT-SCEE-EE-----------------ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEE
T ss_pred EECCC-CCEE-EE-----------------EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeE
Confidence 99875 3311 00 001111 1234678999999998886 332 2567
Q ss_pred EEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCC------CcEEEEEccCce
Q psy15549 217 IMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSD------RSLRTYSIQSKK 267 (621)
Q Consensus 217 ~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~d------g~i~iwd~~~~~ 267 (621)
..||..+++..... .......++|+|+++.|+.+... +.|.+|++..+.
T Consensus 172 ~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 172 YRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred EEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 88887666654333 33456789999999988877665 689999987654
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.34 E-value=6.6e-11 Score=115.46 Aligned_cols=278 Identities=11% Similarity=0.049 Sum_probs=171.4
Q ss_pred CeEEEeccccccCCcceEEEEecC-----CceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGA-----DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF 89 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~-----dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 89 (621)
........|++. .+++... ++.|. +.|..+.+... ++.....+ . +++
T Consensus 34 ~~~~~~~~pd~~-----~vyV~~~~~~~~~~~V~--------------ViD~~t~~v~~-------~I~vG~~P-~-va~ 85 (386)
T 3sjl_D 34 PRILEAPAPDAR-----RVYVNDPAHFAAVTQQF--------------VIDGEAGRVIG-------MIDGGFLP-N-PVV 85 (386)
T ss_dssp CCBCCCCCCCTT-----EEEEEECGGGCSSEEEE--------------EEETTTTEEEE-------EEEECSSC-E-EEE
T ss_pred cceeeccCCCCC-----EEEEEcCcccCCCCEEE--------------EEECCCCeEEE-------EEECCCCC-c-EEE
Confidence 344566789997 6666544 67888 66655544322 23322333 3 999
Q ss_pred ccCCCEEEEEc-----------CCceEEEEeccCccccccceeccccccc-------CCCeEEEEECCCCCEEEEEeC--
Q psy15549 90 SPNGELLASGD-----------DVGKEIWYLTERESGIANVEFASDLSRH-------QKAVNVVRFSPNGELLASGDD-- 149 (621)
Q Consensus 90 spdg~~las~~-----------d~~v~iw~~~~~~~~~~~~~~~~~~~~h-------~~~V~~i~~sp~g~~l~s~s~-- 149 (621)
+|||++|+++. ++.|.+||..+. +....+.-. ......++|+|||++|+++..
T Consensus 86 spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~-------~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~ 158 (386)
T 3sjl_D 86 ADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL-------LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP 158 (386)
T ss_dssp CTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-------CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS
T ss_pred CCCCCEEEEEcccccccccCCCCCEEEEEECCCC-------eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC
Confidence 99999887664 456999998876 333333211 123557899999999888764
Q ss_pred CCcEEEEEccCCCCCCCCCCCCccc-cccc---------ccceeee---------e----eecCCCCCeE-EEEEC-CCC
Q psy15549 150 ESTIIVWKQKTDQDLPEFPSSNLDE-ENVN---------KEHWIVT---------K----ILRGHLEDVY-DISWS-PTS 204 (621)
Q Consensus 150 dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~---------~----~~~~~~~~v~-~i~~s-pd~ 204 (621)
++.|.++|+.+++.+..++...... .... ...+... . .+......+. ...|. ++|
T Consensus 159 ~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 159 APAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred CCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 6899999999998776664322100 0000 0000000 0 0000011111 13443 566
Q ss_pred CEEEEEeCCCeEEEEECCCCcE--EEEec--------c--CCcceEEEEEcCCCCEEEEEeC----------CCcEEEEE
Q psy15549 205 THLISGSVDNTAIMWDVHKGKN--LGILT--------E--HKKFVQGVAWDPKNQYVATLSS----------DRSLRTYS 262 (621)
Q Consensus 205 ~~l~s~~~dg~i~vwd~~~~~~--~~~~~--------~--~~~~v~~l~~sp~~~~l~s~~~----------dg~i~iwd 262 (621)
++++ .+.+|.|++.|+.+... +..+. . .......++++++++.++.... .+.|.++|
T Consensus 239 ~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD 317 (386)
T 3sjl_D 239 RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD 317 (386)
T ss_dssp EEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred cEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEE
Confidence 5444 56689999999976542 22221 0 1123445788999999887653 24799999
Q ss_pred ccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC-eEEeccccccCCCCCCcceeeeeeeeecc
Q psy15549 263 IQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ-LLIAPSGCLENSDSTRKPISVTHVFTRAC 341 (621)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~-~l~~~s~~~~~~d~~i~~~~~~~~~~~~~ 341 (621)
+.+++.+..+.. ...+.++++++|++ +|+++.
T Consensus 318 ~~t~kv~~~i~v------------------------g~~~~~lavs~D~~~~ly~tn----------------------- 350 (386)
T 3sjl_D 318 AKTGERLAKFEM------------------------GHEIDSINVSQDEKPLLYALS----------------------- 350 (386)
T ss_dssp TTTCCEEEEEEE------------------------EEEECEEEECSSSSCEEEEEE-----------------------
T ss_pred CCCCeEEEEEEC------------------------CCCcceEEECCCCCeEEEEEc-----------------------
Confidence 999999888742 22457899999997 555533
Q ss_pred cCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEc
Q psy15549 342 LNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWS 421 (621)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~s 421 (621)
..++.|.++|..+++.+..+.. ...-+.|.++
T Consensus 351 ----------------------------------------------~~~~~VsViD~~t~k~~~~i~~--~~~p~~l~~s 382 (386)
T 3sjl_D 351 ----------------------------------------------TGDKTLYIHDAESGEELRSVNQ--LGHGPQVITT 382 (386)
T ss_dssp ----------------------------------------------TTTTEEEEEETTTCCEEEEECC--CCSSCCEEEE
T ss_pred ----------------------------------------------CCCCeEEEEECCCCcEEEEecC--CCCCceeEEC
Confidence 1468899999999999998854 2345566777
Q ss_pred CC
Q psy15549 422 SD 423 (621)
Q Consensus 422 pd 423 (621)
+|
T Consensus 383 ~d 384 (386)
T 3sjl_D 383 AD 384 (386)
T ss_dssp CC
T ss_pred Cc
Confidence 66
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=6.1e-10 Score=108.63 Aligned_cols=225 Identities=13% Similarity=0.032 Sum_probs=145.0
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
...+.+|+|++. .++++...++.|. .|+..++.... + .....+.+++|+++|+
T Consensus 50 ~~egp~~~~~~~----~l~~~d~~~~~i~--------------~~d~~~~~~~~--------~-~~~~~v~~i~~~~dg~ 102 (326)
T 2ghs_A 50 LGEGPTFDPASG----TAWWFNILERELH--------------ELHLASGRKTV--------H-ALPFMGSALAKISDSK 102 (326)
T ss_dssp BEEEEEEETTTT----EEEEEEGGGTEEE--------------EEETTTTEEEE--------E-ECSSCEEEEEEEETTE
T ss_pred CCcCCeEeCCCC----EEEEEECCCCEEE--------------EEECCCCcEEE--------E-ECCCcceEEEEeCCCe
Confidence 457889999754 3677777788888 77766543211 1 1235799999999999
Q ss_pred EEEEEcCCceEEEEeccCccccccceeccccc--ccCCCeEEEEECCCCCEEEEEeCC----CcEEEEEccCCCCCCCCC
Q psy15549 95 LLASGDDVGKEIWYLTERESGIANVEFASDLS--RHQKAVNVVRFSPNGELLASGDDE----STIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 95 ~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~--~h~~~V~~i~~sp~g~~l~s~s~d----g~i~vwd~~~~~~~~~~~ 168 (621)
++++. .+++.+|+...+.. ..+.... .....+..++++|+|+++++...+ +...||.+.+++.
T Consensus 103 l~v~~-~~gl~~~d~~~g~~-----~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~----- 171 (326)
T 2ghs_A 103 QLIAS-DDGLFLRDTATGVL-----TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV----- 171 (326)
T ss_dssp EEEEE-TTEEEEEETTTCCE-----EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE-----
T ss_pred EEEEE-CCCEEEEECCCCcE-----EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcE-----
Confidence 88765 55688888765521 1111111 112468899999999977655421 2344444443221
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECC--CC-c-----EEEEeccCCcceEE
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVH--KG-K-----NLGILTEHKKFVQG 239 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~--~~-~-----~~~~~~~~~~~v~~ 239 (621)
..+..+......++|+||++.|+.+ +.++.|.+|++. ++ . ....+......+..
T Consensus 172 -----------------~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~g 234 (326)
T 2ghs_A 172 -----------------TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDG 234 (326)
T ss_dssp -----------------EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEE
T ss_pred -----------------EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCe
Confidence 1122233456789999999877655 456899999986 55 3 22233334456788
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeec-CCCCeEEecc
Q psy15549 240 VAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS-PDGQLLIAPS 318 (621)
Q Consensus 240 l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-pdg~~l~~~s 318 (621)
++++++|+++++...++.|.+||. +++.+..+... ...+.+++|+ ++++.|++++
T Consensus 235 i~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~-----------------------~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 235 SVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVP-----------------------GKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECS-----------------------CSBEEEEEEESTTSCEEEEEE
T ss_pred eEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECC-----------------------CCCcEEEEEecCCCCEEEEEe
Confidence 999999987776666788999998 56555544211 1246899998 8988776655
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=9.5e-11 Score=126.85 Aligned_cols=245 Identities=12% Similarity=0.047 Sum_probs=154.2
Q ss_pred cccCcEEEEEEccCCCEEEEEc------CCceEEEEeccCccccccceecc-cccccCCCeEEEEECCCCCEEEEEeCCC
Q psy15549 79 RHQKAVNVVRFSPNGELLASGD------DVGKEIWYLTERESGIANVEFAS-DLSRHQKAVNVVRFSPNGELLASGDDES 151 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~------d~~v~iw~~~~~~~~~~~~~~~~-~~~~h~~~V~~i~~sp~g~~l~s~s~dg 151 (621)
+|...+..++|||||++||.+. ...|++||+.++. .+. .+.. .....++|+ ||+.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~-------~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ-------PLETPLKD--VKFSGISWL-GNEGFFYSSYDK 195 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS-------EEEEEEEE--EESCCCEEE-TTTEEEEEESSC
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC-------CCccccCC--ceeccEEEe-CCCEEEEEEecC
Confidence 4566789999999999999653 1347899998763 111 1111 113567899 999999888774
Q ss_pred -------------cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecC-CCCCeEEEEECCCCCEEEEEeC----C
Q psy15549 152 -------------TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRG-HLEDVYDISWSPTSTHLISGSV----D 213 (621)
Q Consensus 152 -------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~spd~~~l~s~~~----d 213 (621)
.|++|++.+...... .+..... |...+..+.|+|||++|+.... .
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~-----------------~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 258 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDR-----------------LVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSG 258 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCE-----------------EEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSC
T ss_pred cccccccccCCCcEEEEEECCCCcccce-----------------EEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCC
Confidence 399999877643110 0111223 4456788999999998865443 3
Q ss_pred CeEEEEECCCCc-EEEEeccCCcceEEEEEcCCCCEEEEEeC-C---CcEEEEEccCcee--eeecccCCCCCCCccccc
Q psy15549 214 NTAIMWDVHKGK-NLGILTEHKKFVQGVAWDPKNQYVATLSS-D---RSLRTYSIQSKKV--ISRACRSKLPVDSSHELF 286 (621)
Q Consensus 214 g~i~vwd~~~~~-~~~~~~~~~~~v~~l~~sp~~~~l~s~~~-d---g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~ 286 (621)
..|+++|+.++. ....+..+....... |+++|..|+..+. + +.|..+|+.++.. ...+..+
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~----------- 326 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE----------- 326 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-----------
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC-----------
Confidence 589999998763 345555565555554 6677776665544 2 5688888876542 1111100
Q ss_pred cccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceee
Q psy15549 287 DKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLF 366 (621)
Q Consensus 287 ~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (621)
...+. .|++++++|+...
T Consensus 327 ------------~~~~~--~~s~~g~~lv~~~------------------------------------------------ 344 (693)
T 3iuj_A 327 ------------RQQVL--TVHSGSGYLFAEY------------------------------------------------ 344 (693)
T ss_dssp ------------CSSCE--EEEEETTEEEEEE------------------------------------------------
T ss_pred ------------CCCEE--EEEEECCEEEEEE------------------------------------------------
Confidence 01111 6666666665543
Q ss_pred ecCCCCCCCCccCCCcEEEEEEcCC--cEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCC----CcEEEEE
Q psy15549 367 ELKPSDDKPLFKLPYRIVIAVATEN--NILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTD----GYCSIIS 440 (621)
Q Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~d----g~i~iw~ 440 (621)
..++ .|++||+..+ ....+...+...+..+.++++++.|+....+ +.|+.||
T Consensus 345 ---------------------~~~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 345 ---------------------MVDATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp ---------------------EETTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred ---------------------EECCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEE
Confidence 1233 6788888744 3344433344567888889998877765444 7899999
Q ss_pred ecCCcC
Q psy15549 441 FGDNEI 446 (621)
Q Consensus 441 ~~~~~~ 446 (621)
+.+++.
T Consensus 403 ~~~g~~ 408 (693)
T 3iuj_A 403 PKSGAI 408 (693)
T ss_dssp TTTCCE
T ss_pred CCCCeE
Confidence 887753
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=2.4e-10 Score=123.77 Aligned_cols=202 Identities=7% Similarity=0.033 Sum_probs=129.2
Q ss_pred CCCCeEEEeccccccCCcceEEEEe-----cCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTG-----GADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg-----~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
|...+..++|||||+ +||.+ +....|+ +||+.+++.... .+.+ .....
T Consensus 127 ~~~~l~~~~~SpDg~-----~lAy~~~~~G~~~~~i~--------------v~dl~tg~~~~~------~~~~--~k~~~ 179 (693)
T 3iuj_A 127 GTTALDQLSFSRDGR-----ILAYSLSLAGSDWREIH--------------LMDVESKQPLET------PLKD--VKFSG 179 (693)
T ss_dssp SCCEEEEEEECTTSS-----EEEEEEECSSCCEEEEE--------------EEETTTCSEEEE------EEEE--EESCC
T ss_pred CcEEEEEEEECCCCC-----EEEEEEecCCCceEEEE--------------EEECCCCCCCcc------ccCC--ceecc
Confidence 445788999999998 88843 3335666 888887753211 1111 11356
Q ss_pred EEEccCCCEEEEEc-CC-------------ceEEEEeccCccccccceecccccc-cCCCeEEEEECCCCCEEEEEeC--
Q psy15549 87 VRFSPNGELLASGD-DV-------------GKEIWYLTERESGIANVEFASDLSR-HQKAVNVVRFSPNGELLASGDD-- 149 (621)
Q Consensus 87 l~~spdg~~las~~-d~-------------~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~i~~sp~g~~l~s~s~-- 149 (621)
++|+ ||+.|+.++ +. .|.+|++.+.... -..+..... |...+..+.|+|||++|+....
T Consensus 180 ~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~---~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 180 ISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQED---DRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp CEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGG---CEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred EEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCccc---ceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 7899 999988876 42 2677776654221 022333334 5556788999999998865432
Q ss_pred --CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-C---CeEEEEECCC
Q psy15549 150 --ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-D---NTAIMWDVHK 223 (621)
Q Consensus 150 --dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-d---g~i~vwd~~~ 223 (621)
...|+++|+.++... ...+..+....... |+++|..|+..+. + +.|..+|+.+
T Consensus 256 ~~~~~i~~~d~~~~~~~--------------------~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~ 314 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAP--------------------LLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN 314 (693)
T ss_dssp SSCCEEEEEETTSTTCC--------------------CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred CCCcEEEEEECCCCCCc--------------------eEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 348999998776421 13344555555554 6666666655443 3 6899999987
Q ss_pred CcE--EEEeccCCcceEEEEEcCCCCEEEEEeCCC---cEEEEEccCce
Q psy15549 224 GKN--LGILTEHKKFVQGVAWDPKNQYVATLSSDR---SLRTYSIQSKK 267 (621)
Q Consensus 224 ~~~--~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg---~i~iwd~~~~~ 267 (621)
+.. ...+..|...+. .|++++++|+....++ .|++|++..+.
T Consensus 315 ~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~ 361 (693)
T 3iuj_A 315 PGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR 361 (693)
T ss_dssp CCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE
T ss_pred CCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe
Confidence 654 344555665554 8999999887766543 68889887543
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.30 E-value=4.2e-10 Score=113.17 Aligned_cols=243 Identities=11% Similarity=0.033 Sum_probs=145.5
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
....|+|+++++ ++++...++.|+ +||..++..... ... ..... ++|+++++
T Consensus 132 ~P~~la~d~~g~-----lyv~d~~~~~I~--------------~id~~~g~~~~~-------~~~-~~~~~-ia~~~~g~ 183 (409)
T 3hrp_A 132 YMWGIAAVGNNT-----VLAYQRDDPRVR--------------LISVDDNKVTTV-------HPG-FKGGK-PAVTKDKQ 183 (409)
T ss_dssp CEEEEEECSTTE-----EEEEETTTTEEE--------------EEETTTTEEEEE-------EET-CCBCB-CEECTTSS
T ss_pred CceEEEEeCCCC-----EEEEecCCCcEE--------------EEECCCCEEEEe-------ecc-CCCCc-eeEecCCC
Confidence 578999999997 888888888999 777765433211 111 22233 89999999
Q ss_pred EEEEEc-CC--ceEEEEeccCccccccceecccccc-cCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 95 LLASGD-DV--GKEIWYLTERESGIANVEFASDLSR-HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 95 ~las~~-d~--~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
.|+++. ++ .|.+|+...... ......+.. ....+.+++++|++..|+.+..++.|+.||..++.... +.
T Consensus 184 ~l~~~d~~~~~~I~~~d~~~~~~----~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~-~~-- 256 (409)
T 3hrp_A 184 RVYSIGWEGTHTVYVYMKASGWA----PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTL-IK-- 256 (409)
T ss_dssp EEEEEBSSTTCEEEEEEGGGTTC----EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEE-EE--
T ss_pred cEEEEecCCCceEEEEEcCCCce----eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEE-Ee--
Confidence 888877 34 455665543311 011111112 34567889999955556567778899999988664210 00
Q ss_pred CcccccccccceeeeeeecCCCCCe-E-EEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEeccCC-------------
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDV-Y-DISWSPT-STHLISGSVDNTAIMWDVHKGKNLGILTEHK------------- 234 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v-~-~i~~spd-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~------------- 234 (621)
.....++...- . .++|+|+ +.++++-...+.|+.|+.... +..+.++.
T Consensus 257 --------------~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~ 320 (409)
T 3hrp_A 257 --------------QLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEA 320 (409)
T ss_dssp --------------ECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGC
T ss_pred --------------cccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCccccc
Confidence 00011222211 3 8999995 555555566789999987543 23332221
Q ss_pred --cceEEEEEcCCCCEEEEEe-CCCcEEEEEccCceeeeecccCCC-CCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 235 --KFVQGVAWDPKNQYVATLS-SDRSLRTYSIQSKKVISRACRSKL-PVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 235 --~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
.....++++|+|+++++-. .++.|+.|++.++........... ....+. .....-.....++++++
T Consensus 321 ~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~----------~~~~~~~~P~giavd~~ 390 (409)
T 3hrp_A 321 LFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGT----------PLEATFNYPYDICYDGE 390 (409)
T ss_dssp BCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBS----------TTTCCBSSEEEEEECSS
T ss_pred EeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCC----------hhceEeCCceEEEEcCC
Confidence 3478999999999777766 788999999877764332211000 000000 00011124578999999
Q ss_pred CCeEEecc
Q psy15549 311 GQLLIAPS 318 (621)
Q Consensus 311 g~~l~~~s 318 (621)
|.++++-.
T Consensus 391 g~lyVad~ 398 (409)
T 3hrp_A 391 GGYWIAEA 398 (409)
T ss_dssp SEEEEEES
T ss_pred CCEEEEEC
Confidence 87776655
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.8e-09 Score=103.62 Aligned_cols=158 Identities=16% Similarity=0.169 Sum_probs=105.2
Q ss_pred EEc--cCCCEEEEEc--CCceEEEEeccCccccccceeccccc------c-cCCCeEEEEECCCCCEEEEEeCC------
Q psy15549 88 RFS--PNGELLASGD--DVGKEIWYLTERESGIANVEFASDLS------R-HQKAVNVVRFSPNGELLASGDDE------ 150 (621)
Q Consensus 88 ~~s--pdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~------~-h~~~V~~i~~sp~g~~l~s~s~d------ 150 (621)
.++ +++++|+..+ ++.|.++|+....... +....+. . ....-..+..+|+| +++++..+
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p---~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~ 163 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREP---KIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGP 163 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSC---EEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSC
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCc---eeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCC
Confidence 457 8899998876 7889999986442211 2222221 1 11244567889999 77776555
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-------------------
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS------------------- 211 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~------------------- 211 (621)
|.|.++|..+.+.+..++.. .....--+.+-|+|+++.+++..
T Consensus 164 g~v~vlD~~T~~v~~~~~~~------------------~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEID------------------RGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp CEEEEECTTTCCEEEECCSB------------------CTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred CeEEEEECCCCeEEEEEccC------------------CCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 78999999988865333100 01112234688899999888875
Q ss_pred CCCeEEEEECCCCcEEEEeccC--CcceEEEEE--cCCCCEEEEEeC------CCcEEEEEccCce
Q psy15549 212 VDNTAIMWDVHKGKNLGILTEH--KKFVQGVAW--DPKNQYVATLSS------DRSLRTYSIQSKK 267 (621)
Q Consensus 212 ~dg~i~vwd~~~~~~~~~~~~~--~~~v~~l~~--sp~~~~l~s~~~------dg~i~iwd~~~~~ 267 (621)
....|.+||+.+++.+.++... ......+.| +|+++++++++. +++|.+|....+.
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~ 291 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK 291 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc
Confidence 3689999999998888877542 133455656 999999887774 5688887776543
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=4.4e-09 Score=102.49 Aligned_cols=148 Identities=11% Similarity=-0.014 Sum_probs=95.3
Q ss_pred EEEEEEccCCCEEE-EEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 84 VNVVRFSPNGELLA-SGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 84 V~~l~~spdg~~la-s~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
..+.+|+|++..|+ +.. ++.|.+|+...+. . ..+ .....+.+++|+++|+++++. .+ .|.+||..++
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~-------~-~~~-~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g 119 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGR-------K-TVH-ALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATG 119 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTE-------E-EEE-ECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCc-------E-EEE-ECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCC
Confidence 45678999865544 444 6778888877542 1 111 124579999999999877765 44 4999998776
Q ss_pred CCCCCCCCCCcccccccccceeeeeeec--CCCCCeEEEEECCCCCEEEEEeC------CCeEEEEECCCCcEEEEeccC
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILR--GHLEDVYDISWSPTSTHLISGSV------DNTAIMWDVHKGKNLGILTEH 233 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~i~~spd~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~ 233 (621)
+... + .... .....+..++++|+|+++++... .+.|..++ +++.. .+..+
T Consensus 120 ~~~~-~------------------~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~ 177 (326)
T 2ghs_A 120 VLTL-H------------------AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFAD 177 (326)
T ss_dssp CEEE-E------------------ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEE
T ss_pred cEEE-E------------------eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCC
Confidence 5310 0 0011 11245889999999987665442 24566666 45433 33233
Q ss_pred CcceEEEEEcCCCCEEEEEe-CCCcEEEEEcc
Q psy15549 234 KKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQ 264 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~ 264 (621)
......++|+|+++.|+.+. .++.|.+|++.
T Consensus 178 ~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 178 ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp ESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 34567899999999876554 46889999985
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.3e-09 Score=105.29 Aligned_cols=230 Identities=9% Similarity=0.023 Sum_probs=148.5
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
++.+..+.....+.+|+|+++ .+++++..++.|. .|+.. +.. . .+..+...+.
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~----~l~~~d~~~~~i~--------------~~~~~-g~~-~-------~~~~~~~~~~ 89 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQR----TLVWSDLVGRRVL--------------GWRED-GTV-D-------VLLDATAFTN 89 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGT----EEEEEETTTTEEE--------------EEETT-SCE-E-------EEEESCSCEE
T ss_pred eEEEecCCcCccCCeEeCCCC----EEEEEECCCCEEE--------------EEeCC-CCE-E-------EEeCCCCccc
Confidence 344555566788999999996 4667777888888 77653 221 1 2334566789
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceec-ccccc-cCCCeEEEEECCCCCEEEE----EeC---------
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFA-SDLSR-HQKAVNVVRFSPNGELLAS----GDD--------- 149 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~-~~~~~-h~~~V~~i~~sp~g~~l~s----~s~--------- 149 (621)
.++++++|+++++.. ++.|.+|+.. +.. ..+ ....+ ....+..+++.++|+++++ |..
T Consensus 90 gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~-----~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~ 163 (305)
T 3dr2_A 90 GNAVDAQQRLVHCEHGRRAITRSDAD-GQA-----HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPAD 163 (305)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SCE-----EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCC
T ss_pred eeeECCCCCEEEEECCCCEEEEECCC-CCE-----EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccc
Confidence 999999999777665 5678888764 311 111 11111 1234678999999998886 332
Q ss_pred ----CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC------CeEEEE
Q psy15549 150 ----ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD------NTAIMW 219 (621)
Q Consensus 150 ----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d------g~i~vw 219 (621)
.+.|..||..+++.. .+. .......++|+||++.|+.+... +.|.+|
T Consensus 164 ~~~~~~~v~~~d~~~g~~~----------------------~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~ 220 (305)
T 3dr2_A 164 PELAHHSVYRLPPDGSPLQ----------------------RMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAF 220 (305)
T ss_dssp CSSSCEEEEEECSSSCCCE----------------------EEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEE
T ss_pred cccCCCeEEEEcCCCCcEE----------------------EEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEE
Confidence 245666666555421 112 33456889999999988877665 789999
Q ss_pred ECCCCcEE--EEe-ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccC
Q psy15549 220 DVHKGKNL--GIL-TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDD 296 (621)
Q Consensus 220 d~~~~~~~--~~~-~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (621)
++..+... ..+ .........++++++|++.+ ++.+ .|.+|+. .++.+..+...
T Consensus 221 ~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~-gv~~~~~-~g~~~~~~~~~--------------------- 276 (305)
T 3dr2_A 221 AWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWS-SSGT-GVCVFDS-DGQLLGHIPTP--------------------- 276 (305)
T ss_dssp EEETTEEEEEEEEECCSSSCCCSEEECTTSCEEE-CCSS-EEEEECT-TSCEEEEEECS---------------------
T ss_pred EecCCCccCCeEEEECCCCCCCeEEECCCCCEEE-ecCC-cEEEECC-CCCEEEEEECC---------------------
Confidence 98765411 111 11234456789999999544 4444 4999998 45555544321
Q ss_pred CcccceeeeeecCCCCeEEecc
Q psy15549 297 TMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 297 ~~~~~i~~~~~spdg~~l~~~s 318 (621)
..+.+++|+++++.|++++
T Consensus 277 ---~~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 277 ---GTASNCTFDQAQQRLFITG 295 (305)
T ss_dssp ---SCCCEEEECTTSCEEEEEE
T ss_pred ---CceeEEEEeCCCCEEEEEc
Confidence 1247899999998887766
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.26 E-value=1.7e-10 Score=117.16 Aligned_cols=214 Identities=9% Similarity=0.044 Sum_probs=136.5
Q ss_pred ccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccc------------cc------cCcE
Q psy15549 23 LKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLS------------RH------QKAV 84 (621)
Q Consensus 23 pd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~------------~h------~~~V 84 (621)
|-|+.|.++.+.+|+..|.++||=+.+.+.+..|-+++......--..-+....|. .+ .+..
T Consensus 8 ~~g~~d~~~~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~ 87 (595)
T 1fwx_A 8 APGQLDDYYGFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDL 87 (595)
T ss_dssp CTTCCCSEEEEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCB
T ss_pred CCCCcccEEEEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCC
Confidence 44556778899999999999999999998888777777653221000000001111 01 1222
Q ss_pred EEEEEcc-----CCCEEEEEc--CCceEEEEeccCccccccceecc--cccccCCCeEEEEE-C-CCCCEEEEEeC----
Q psy15549 85 NVVRFSP-----NGELLASGD--DVGKEIWYLTERESGIANVEFAS--DLSRHQKAVNVVRF-S-PNGELLASGDD---- 149 (621)
Q Consensus 85 ~~l~~sp-----dg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~--~~~~h~~~V~~i~~-s-p~g~~l~s~s~---- 149 (621)
.....|. ||++|..+. ++.|.+.|+... +... .+.. ...+..+++ + |+++++++++.
T Consensus 88 hh~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~-------~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p 159 (595)
T 1fwx_A 88 HHVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVM-------KCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETP 159 (595)
T ss_dssp CCEEEEEETTEEEEEEEEEEETTTTEEEEEETTTT-------EEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEE
T ss_pred CccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCc-------eEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccc
Confidence 2345555 889988877 445888888876 3333 2221 235778888 5 89999988852
Q ss_pred --------------CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC-
Q psy15549 150 --------------ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN- 214 (621)
Q Consensus 150 --------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg- 214 (621)
++.+.++|..+.+....+ .-+. ....++++|+|+++++.+.+.
T Consensus 160 ~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI--------------------~Vgg--~pd~~~~spdGk~~~vt~~~se 217 (595)
T 1fwx_A 160 LVNDGTNMEDVANYVNVFTAVDADKWEVAWQV--------------------LVSG--NLDNCDADYEGKWAFSTSYNSE 217 (595)
T ss_dssp SSCSSSSTTCGGGEEEEEEEEETTTTEEEEEE--------------------EESS--CCCCEEECSSSSEEEEEESCTT
T ss_pred cCCCCcccccccccCceEEEEECCCCeEEEEE--------------------EeCC--CccceEECCCCCEEEEEecCcc
Confidence 356888888876543211 1111 345577888888888877543
Q ss_pred -------------------------------------eEEEEECCC--CcE-EEEeccCCcceEEEEEcCCCCEEEEEe-
Q psy15549 215 -------------------------------------TAIMWDVHK--GKN-LGILTEHKKFVQGVAWDPKNQYVATLS- 253 (621)
Q Consensus 215 -------------------------------------~i~vwd~~~--~~~-~~~~~~~~~~v~~l~~sp~~~~l~s~~- 253 (621)
.|.|.|..+ ++. +..+.. .....++.++|||+++++++
T Consensus 218 ~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~ 296 (595)
T 1fwx_A 218 KGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGK 296 (595)
T ss_dssp CCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECT
T ss_pred cCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCC
Confidence 366777766 444 344432 23456899999999987665
Q ss_pred CCCcEEEEEccCce
Q psy15549 254 SDRSLRTYSIQSKK 267 (621)
Q Consensus 254 ~dg~i~iwd~~~~~ 267 (621)
.+.+|.++|+.+.+
T Consensus 297 ~s~~VsVid~~~~~ 310 (595)
T 1fwx_A 297 LSPTVTVLDVTRFD 310 (595)
T ss_dssp TSSBEEEEEGGGHH
T ss_pred CCCeEEEEECcccc
Confidence 47899999998653
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.2e-09 Score=105.55 Aligned_cols=260 Identities=9% Similarity=0.033 Sum_probs=147.8
Q ss_pred CCeEEEeccccccCCcceEEEEec--CCceEEeeeccCccccccceeEEecccccccccee-eccccccccCcEEEEEEc
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGG--ADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVE-FASDLSRHQKAVNVVRFS 90 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~--~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~-~~~~~~~h~~~V~~l~~s 90 (621)
.....|+++|+|+ ++++.. .++.++ ||.+.++... .+. .......|...+..++++
T Consensus 17 ~~p~~va~~~~g~-----~~v~~~~~~~~~~~--------------l~~~~~g~~~--~~p~~~~~~~~~~~~p~gv~~d 75 (343)
T 2qe8_A 17 LAPGNITLTPDGR-----LFLSLHQFYQPEMQ--------------VAELTQDGLI--PFPPQSGNAIITFDTVLGIKSD 75 (343)
T ss_dssp SCEEEEEECTTSC-----EEEEECGGGCCSCS--------------EEEEETTEEE--ESCCCCSSCCCCCSCEEEEEEC
T ss_pred CCcceEEECCCCC-----EEEEeCCCCCCceE--------------EEEECCCCee--cCCCcccCcccceeEeeEEEEc
Confidence 6799999999998 887753 234355 5555422110 000 001123466789999999
Q ss_pred cCCCEEEEEc------CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEE-EEEe---CCCcEEEEEccC
Q psy15549 91 PNGELLASGD------DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL-ASGD---DESTIIVWKQKT 160 (621)
Q Consensus 91 pdg~~las~~------d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l-~s~s---~dg~i~vwd~~~ 160 (621)
++|+++++.. +..|.+||+.++.. ...+........+...+..+++++++..+ ++.. .++.|.+||+.+
T Consensus 76 ~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~-~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 76 GNGIVWMLDNGNQSKSVPKLVAWDTLNNQL-SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp SSSEEEEEECHHHHTSCCEEEEEETTTTEE-EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred CCCcEEEEcCCCCcCCCCeEEEEECCCCeE-EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence 9998777643 36788999876521 00000001111233457899999865444 4544 578999999987
Q ss_pred CCCCCCCCCC-Cccc--ccc--cccceeee---eeecCCCCCeEEEEECCCCCEEEEEeCCC-eEEEEECC---CCc---
Q psy15549 161 DQDLPEFPSS-NLDE--ENV--NKEHWIVT---KILRGHLEDVYDISWSPTSTHLISGSVDN-TAIMWDVH---KGK--- 225 (621)
Q Consensus 161 ~~~~~~~~~~-~~~~--~~~--~~~~~~~~---~~~~~~~~~v~~i~~spd~~~l~s~~~dg-~i~vwd~~---~~~--- 225 (621)
++....+... .... ... ....+... .........+..|+|+||++.|+++...+ .+..++.. .+.
T Consensus 155 g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~ 234 (343)
T 2qe8_A 155 GLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTD 234 (343)
T ss_dssp CCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCH
T ss_pred CCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCCh
Confidence 7543322110 0000 000 00000000 00000113468899999999888887765 55555432 111
Q ss_pred -----EEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCccc
Q psy15549 226 -----NLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKS 300 (621)
Q Consensus 226 -----~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (621)
.+.. .++......++++++|+++++...++.|.+||..+++...... ...-.
T Consensus 235 ~~~~~~~~~-~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~----------------------~~~~~ 291 (343)
T 2qe8_A 235 AELGSKIER-YSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVT----------------------DEKLS 291 (343)
T ss_dssp HHHHTTCEE-EEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEE----------------------CGGGS
T ss_pred hhhhcceEe-cccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEE----------------------CCcee
Confidence 0011 1233345679999999988888889999999985555322211 01122
Q ss_pred ceeeeeecCCCCeEEecc
Q psy15549 301 FFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 301 ~i~~~~~spdg~~l~~~s 318 (621)
...+++|.++|.++++.+
T Consensus 292 ~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 292 WTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp CEEEEEECTTSCEEEEEC
T ss_pred cCCeeEECCCCcEEEEeC
Confidence 457899999998777765
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-09 Score=107.55 Aligned_cols=202 Identities=12% Similarity=0.013 Sum_probs=123.4
Q ss_pred EEEEccCCCEEEEEc-----------CCceEEEEeccCccccccceeccccccc-------CCCeEEEEECCCCCEEEEE
Q psy15549 86 VVRFSPNGELLASGD-----------DVGKEIWYLTERESGIANVEFASDLSRH-------QKAVNVVRFSPNGELLASG 147 (621)
Q Consensus 86 ~l~~spdg~~las~~-----------d~~v~iw~~~~~~~~~~~~~~~~~~~~h-------~~~V~~i~~sp~g~~l~s~ 147 (621)
.++++|||++|+++. ++.|.++|..+. +....+.-. ......++|+|||++|+++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~-------~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~ 194 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF-------LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFY 194 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-------CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC-------cEEEEEECCCccccccCCCcceEEEcCCCCEEEEE
Confidence 799999999887764 456888988776 223322110 1234568999999999988
Q ss_pred eC--CCcEEEEEccCCCCCCCCCCCCccc-cccc---------ccceeeeee------------ecCCCCC-eEEEEECC
Q psy15549 148 DD--ESTIIVWKQKTDQDLPEFPSSNLDE-ENVN---------KEHWIVTKI------------LRGHLED-VYDISWSP 202 (621)
Q Consensus 148 s~--dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~------------~~~~~~~-v~~i~~sp 202 (621)
.. ++.|.+.|+.+.+.+..++...... .... ...+..... +...... ...+.|.+
T Consensus 195 n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~ 274 (426)
T 3c75_H 195 QFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSL 274 (426)
T ss_dssp ECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECT
T ss_pred ecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecC
Confidence 74 5789999999998776664422100 0000 000000000 0000000 01245688
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcEEE--Eec---c-------CCcceEEEEEcCCCCEEEEEeC----------CCcEEE
Q psy15549 203 TSTHLISGSVDNTAIMWDVHKGKNLG--ILT---E-------HKKFVQGVAWDPKNQYVATLSS----------DRSLRT 260 (621)
Q Consensus 203 d~~~l~s~~~dg~i~vwd~~~~~~~~--~~~---~-------~~~~v~~l~~sp~~~~l~s~~~----------dg~i~i 260 (621)
++..++..+..+.|.+.|+....... .+. . .......++++|+++++++... ++.|.+
T Consensus 275 dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsV 354 (426)
T 3c75_H 275 RSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVV 354 (426)
T ss_dssp TTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEE
Confidence 88877777788899999986543211 110 0 0111223789999988777643 357999
Q ss_pred EEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC-eEEecc
Q psy15549 261 YSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ-LLIAPS 318 (621)
Q Consensus 261 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~-~l~~~s 318 (621)
+|+.+.+.+..+... ....+++|+|||+ +++++.
T Consensus 355 ID~~T~kvv~~I~vg------------------------~~P~gia~spDg~~~lyv~n 389 (426)
T 3c75_H 355 LNAETGERINKIELG------------------------HEIDSINVSQDAEPLLYALS 389 (426)
T ss_dssp EETTTCCEEEEEEEE------------------------EEECEEEECCSSSCEEEEEE
T ss_pred EECCCCeEEEEEECC------------------------CCcCeEEEccCCCEEEEEEc
Confidence 999999988877422 1247899999998 666544
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.4e-09 Score=106.37 Aligned_cols=274 Identities=10% Similarity=-0.079 Sum_probs=161.2
Q ss_pred ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe----------CCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 103 GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD----------DESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 103 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s----------~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
.|.++|..+. +.+..+.....+ .+.++||+++++++. .++.|.+||+.+.+.+..++
T Consensus 47 ~vsvID~~t~-------~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~---- 113 (368)
T 1mda_H 47 ENWVSCAGCG-------VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIE---- 113 (368)
T ss_dssp EEEEEETTTT-------EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEE----
T ss_pred eEEEEECCCC-------eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEE----
Confidence 6778888776 555666555555 799999999888876 36789999999998653321
Q ss_pred ccccccccceeeeeeec-CC----CCCeEEEEECCCCCEEEEEeC--CCeEEE--EECCCCcEEEEeccCCcceEEEEEc
Q psy15549 173 DEENVNKEHWIVTKILR-GH----LEDVYDISWSPTSTHLISGSV--DNTAIM--WDVHKGKNLGILTEHKKFVQGVAWD 243 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~-~~----~~~v~~i~~spd~~~l~s~~~--dg~i~v--wd~~~~~~~~~~~~~~~~v~~l~~s 243 (621)
+. +. ......++++|||++|+++.. ...|.+ +|+.+ +..+... +. +.+.
T Consensus 114 ---------------v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~ 171 (368)
T 1mda_H 114 ---------------LPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIH 171 (368)
T ss_dssp ---------------ETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCE
T ss_pred ---------------CCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEc
Confidence 11 00 123567999999999999875 467888 98877 3444221 11 1233
Q ss_pred CCC-CEEEEEeCCCcEEEEEccC-----ceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 244 PKN-QYVATLSSDRSLRTYSIQS-----KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 244 p~~-~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
|++ ..+++.+.||.+.+.|+.+ ++...... ...++ . ..+. . ++++..++..
T Consensus 172 p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t-~~i~v----------------g--~~P~---~-~~~~~~~~~v 228 (368)
T 1mda_H 172 PGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCT-GAQNC----------------S--SQAA---Q-ANYPGMLVWA 228 (368)
T ss_dssp EEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSC-TTSCB----------------C--SCCE---E-ETTTTEEEEC
T ss_pred cCCCeEEEEEcCCCCEEEEECccccccCCeEEEEee-eeeeC----------------C--CCcc---c-cccCCEEEEE
Confidence 544 3455566788888888876 44322110 00000 0 0111 3 5666666665
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCC-CCccCCCcEEEEEEc-------
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDK-PLFKLPYRIVIAVAT------- 389 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~------- 389 (621)
+ . +.+.+.+........ .... .+.. .......+.| .+.. ..+.++++.++++..
T Consensus 229 s-----~-~~V~viD~~~~~~~v--~~~~-~~~~--~~~~~~~~~p-------~g~~~v~~s~dg~~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 229 V-----A-SSILQGDIPAAGATM--KAAI-DGNE--SGRKADNFRS-------AGFQMVAKLKNTDGIMILTVEHSRSCL 290 (368)
T ss_dssp B-----S-SCCEEEECCSSCCEE--ECCC-CSSC--THHHHTTEEE-------CSSSCEEEETTTTEEEEEEEECSSCTT
T ss_pred c-----C-CEEEEEECCCCcceE--EEEE-Eecc--cccccccccc-------CcceeeEEcCCCCEEEEEeccccCccc
Confidence 5 4 555555542100000 0000 0000 0000000000 0000 113336666666543
Q ss_pred --CCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCe-EEEEe-CCCcEEEEEecCCcCCcccCCCC
Q psy15549 390 --ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKV-LIASS-TDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 390 --dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~-l~s~s-~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
++.+.++|+.+.+.+..+..+. ....|+|+|||++ +++.. .++.|.++|+.+++....+....
T Consensus 291 ~~~~~~~ViD~~t~~vv~~i~vg~--~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 291 AAAENTSSVTASVGQTSGPISNGH--DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp SCEEEEEEEESSSCCEEECCEEEE--EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred ccCCCEEEEECCCCeEEEEEECCC--CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC
Confidence 2356699999999988886433 6889999999984 55666 59999999999999888776544
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.15 E-value=9.3e-10 Score=118.22 Aligned_cols=390 Identities=13% Similarity=0.093 Sum_probs=193.8
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccccc-CcE-EEEEEccCCCEEEEEc-CCceEEEE
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ-KAV-NVVRFSPNGELLASGD-DVGKEIWY 108 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~-~~V-~~l~~spdg~~las~~-d~~v~iw~ 108 (621)
.|++++.++.|..+|..+.+. +|.......... ..... ..+ ..+++ .+..|+.++ ++.+..+|
T Consensus 72 ~vyv~~~~~~v~AlD~~tG~~-----~W~~~~~~~~~~-------~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlD 137 (689)
T 1yiq_A 72 VMYTTGPFSVVYALDARDGRL-----IWKYDPQSDRHR-------AGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAID 137 (689)
T ss_dssp EEEEECGGGCEEEEETTTCCE-----EEEECCCCCGGG-------GGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCce-----eEEEcCCCCccc-------cccccccCCCCccEE--ECCEEEEEccCCEEEEEE
Confidence 777788888999777776654 777654322110 00000 000 11111 234455554 77788888
Q ss_pred eccCccccccceecccccc--cCCCeEEEEECC---CCCEEEEEe------CCCcEEEEEccCCCCCCCCCCCC--cccc
Q psy15549 109 LTERESGIANVEFASDLSR--HQKAVNVVRFSP---NGELLASGD------DESTIIVWKQKTDQDLPEFPSSN--LDEE 175 (621)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~--h~~~V~~i~~sp---~g~~l~s~s------~dg~i~vwd~~~~~~~~~~~~~~--~~~~ 175 (621)
..++.. +..... +......+..+| ++ .++.++ .+|.|+.||..+++.+-.+.... ....
T Consensus 138 a~TG~~-------~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~ 209 (689)
T 1yiq_A 138 AKTGQR-------AWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLP 209 (689)
T ss_dssp TTTCCE-------EEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSC
T ss_pred CCCCCE-------eeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccc
Confidence 776632 211111 100001111112 44 444443 36899999999998754332100 0000
Q ss_pred ----c--ccccceeee--eeecCCCCCeEEEEECCCCCEEEEEeCCCe-------------------EEEEECCCCcEEE
Q psy15549 176 ----N--VNKEHWIVT--KILRGHLEDVYDISWSPTSTHLISGSVDNT-------------------AIMWDVHKGKNLG 228 (621)
Q Consensus 176 ----~--~~~~~~~~~--~~~~~~~~~v~~i~~spd~~~l~s~~~dg~-------------------i~vwd~~~~~~~~ 228 (621)
. .....|.-. ....++......++++|++.+++.++.++. |..||..+|+.+.
T Consensus 210 ~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W 289 (689)
T 1yiq_A 210 PEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVW 289 (689)
T ss_dssp CCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEE
T ss_pred cccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeE
Confidence 0 000000000 000011222236788898889998887763 9999999999988
Q ss_pred Eecc--CC-------cceEEEEEcCCCC---EEEEEeCCCcEEEEEccCceeeeecccCCCCCCC------ccccccccc
Q psy15549 229 ILTE--HK-------KFVQGVAWDPKNQ---YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDS------SHELFDKVV 290 (621)
Q Consensus 229 ~~~~--~~-------~~v~~l~~sp~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 290 (621)
.+.. |. ..+.......+|+ .++.++.+|.++++|..+|+.+............ .........
T Consensus 290 ~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~ 369 (689)
T 1yiq_A 290 HYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEEN 369 (689)
T ss_dssp EEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHH
T ss_pred eeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhh
Confidence 7753 21 1122222223564 7888999999999999999988654332211000 000000000
Q ss_pred cc-ccc-------C--CcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCccccee-ee
Q psy15549 291 PL-FHD-------D--TMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSV-AV 359 (621)
Q Consensus 291 ~~-~~~-------~--~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 359 (621)
.. +.. . ........++|+|+..++++.. .+.....+.... .+..........+. .+
T Consensus 370 ~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~-----~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 370 AAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPA-----HIMSAYYEHIPE--------APKRNPFKSMYQLGLRT 436 (689)
T ss_dssp HCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEE-----EECCEEEECCSS--------CCCCCSCTTSCCCSSEE
T ss_pred ccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEec-----cccceeeeeccc--------cccccccccccccCccc
Confidence 00 000 0 0001123478899888887765 221111111100 00000000000000 00
Q ss_pred eccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEE
Q psy15549 360 KCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSII 439 (621)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw 439 (621)
...| .. ..+........+|.|+.||+.+++.+-.+.. ..++....++..|.++++++.||.|+.|
T Consensus 437 ~~~p-------~~------~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagglvf~gt~dg~l~a~ 501 (689)
T 1yiq_A 437 GMMP-------EG------AEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY--VTIFNGGTLSTAGNLVFEGSADGRVIAY 501 (689)
T ss_dssp CCCC-------SS------HHHHHHHHTTCEEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEE
T ss_pred cccC-------cc------cccCCCCCCCcceeEEEEECCCCCeEeEccC--CCCccCccceECCCEEEEECCCCcEEEE
Confidence 0000 00 0000000000247899999999998877743 2334444666678899999999999999
Q ss_pred EecCCcCCcccCCCCCcc-cccCCCCCCCCccc
Q psy15549 440 SFGDNEIGIPYVPPSGEE-SKENDPTKGEPVRS 471 (621)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s 471 (621)
|..+|+.+-.+..+.+.. .-+.+..+|+..+.
T Consensus 502 D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 502 AADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp ETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 999999887776654433 33444577774443
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.10 E-value=8.2e-09 Score=100.84 Aligned_cols=301 Identities=8% Similarity=-0.002 Sum_probs=171.5
Q ss_pred EEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEE
Q psy15549 18 SVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLA 97 (621)
Q Consensus 18 ~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~la 97 (621)
++.+..++ .|.+++.++.|. .|| .+++.... ...+...+.++...++|.+++
T Consensus 24 ~~~~d~~g------~l~v~t~~~~l~--------------~~d-~~g~~~~~-------~~~~~~~~~~~~~~~~g~l~v 75 (330)
T 3hxj_A 24 SPILAKNG------TIYLGSSNKNLY--------------AIN-TDGSVKWF-------FKSGEIIECRPSIGKDGTIYF 75 (330)
T ss_dssp CCEECTTS------CEECSSTTTTTE--------------EEC-TTSCEEES-------SCGGGEEEECCEETTTTEECC
T ss_pred CceEccCC------eEEEEcCCCEEE--------------EEC-CCCcEEEE-------EecCCCcccceEEecCCcEEE
Confidence 34454555 677777788777 555 33332111 122334567777777776544
Q ss_pred EEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccc
Q psy15549 98 SGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENV 177 (621)
Q Consensus 98 s~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 177 (621)
++.+ +..++. .+ .....+...........+. +..|..++.++.|..+|.. ++..
T Consensus 76 -~t~~-l~~~d~-~g-------~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~------------- 129 (330)
T 3hxj_A 76 -GSDK-VYAINP-DG-------TEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEK------------- 129 (330)
T ss_dssp -SSCE-EEEECC-CG-------GGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEE-------------
T ss_pred -ecCc-EEEECC-CC-------cEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEE-------------
Confidence 4444 666664 22 1122222222222223333 4567778888999999987 5432
Q ss_pred cccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCc
Q psy15549 178 NKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRS 257 (621)
Q Consensus 178 ~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~ 257 (621)
.....+...+.++...+++. |..++.++.|..||.. ++.+..+......+.++.+.+++..++ ++ +.
T Consensus 130 --------~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~ 196 (330)
T 3hxj_A 130 --------WRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DK 196 (330)
T ss_dssp --------EEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SS
T ss_pred --------EEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CE
Confidence 12222334455666777776 6667778999999998 877777665566677788878887554 44 78
Q ss_pred EEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeee
Q psy15549 258 LRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVF 337 (621)
Q Consensus 258 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~ 337 (621)
|..|| .+++.+...... ...+.++...++|...+... ++.+..++....
T Consensus 197 l~~~d-~~g~~~~~~~~~-----------------------~~~~~~~~~~~~g~l~v~t~------~~gl~~~~~~g~- 245 (330)
T 3hxj_A 197 VYAIN-PDGTEKWNFYAG-----------------------YWTVTRPAISEDGTIYVTSL------DGHLYAINPDGT- 245 (330)
T ss_dssp EEEEC-TTSCEEEEECCS-----------------------SCCCSCCEECTTSCEEEEET------TTEEEEECTTSC-
T ss_pred EEEEC-CCCcEEEEEccC-----------------------CcceeceEECCCCeEEEEcC------CCeEEEECCCCC-
Confidence 99999 666655444211 12356778888876555432 333333321100
Q ss_pred eecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEE
Q psy15549 338 TRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTD 417 (621)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~ 417 (621)
........... ........++.+.+++.+|.|+.+|. +++.+..... ....+.+
T Consensus 246 -------~~~~~~~~~~~-----------------~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~~-~~~~~~~ 299 (330)
T 3hxj_A 246 -------EKWRFKTGKRI-----------------ESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFET-GSWIIAT 299 (330)
T ss_dssp -------EEEEEECSSCC-----------------CSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEEC-SSCCCSC
T ss_pred -------EeEEeeCCCCc-----------------cccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEEc-CCccccc
Confidence 00000000000 00011123467888888889999996 6766665532 4456778
Q ss_pred EEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 418 ITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 418 ~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
+...++|+ |..++.+|.+++.....
T Consensus 300 ~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 300 PVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp CEECTTCC-EEEECTTSCEEEEEC--
T ss_pred eEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 88888886 55688999999887653
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.2e-08 Score=100.19 Aligned_cols=254 Identities=13% Similarity=0.137 Sum_probs=146.5
Q ss_pred eecCCCC-----eEEEecc--ccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeec--cccc-
Q psy15549 9 SWHNRDP-----VLSVDIQ--LKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFA--SDLS- 78 (621)
Q Consensus 9 ~~~h~~~-----v~~l~~s--pd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~--~~~~- 78 (621)
..||.++ ..+.+++ ++++ .+++.|..++.|. |.|+.+........+.+ .++.
T Consensus 72 e~HH~gwn~css~~~~~~~~~~~r~----~l~v~~l~s~~I~--------------viD~~t~p~~p~~~k~ie~~~~~~ 133 (462)
T 2ece_A 72 ELHHFGWNACSSALCPNGKPNIERR----FLIVPGLRSSRIY--------------IIDTKPNPREPKIIKVIEPEEVKK 133 (462)
T ss_dssp CBCCCEESCCGGGGSTTCCTTCCSC----EEEEEBTTTCCEE--------------EEECCSCTTSCEEEEEECHHHHHH
T ss_pred cccccchhhhhhhcccccCCCccCC----EEEEccCCCCeEE--------------EEECCCCCCCceeeeeechhhccc
Confidence 3566543 3444567 7777 5666677889999 55543322111101111 0010
Q ss_pred -cccCcEEEEEEccCCCEEEEEc-C------CceEEEEeccCccccccceecccccc--cC-CCeEEEEECCCCCEEEEE
Q psy15549 79 -RHQKAVNVVRFSPNGELLASGD-D------VGKEIWYLTERESGIANVEFASDLSR--HQ-KAVNVVRFSPNGELLASG 147 (621)
Q Consensus 79 -~h~~~V~~l~~spdg~~las~~-d------~~v~iw~~~~~~~~~~~~~~~~~~~~--h~-~~V~~i~~sp~g~~l~s~ 147 (621)
.....-..+..+|+| +++++. + +++.++|..+. +.+..+.. .. ..-..+.|+|+++.+++.
T Consensus 134 ~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~-------~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS 205 (462)
T 2ece_A 134 VSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF-------EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSS 205 (462)
T ss_dssp HHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC-------CEEEECCSBCTTCCCCCCEEEETTTTEEEEC
T ss_pred ccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC-------eEEEEEccCCCCccccceEEECCCCCEEEEc
Confidence 011234567788999 666543 3 57888888765 33333331 21 223458889999988887
Q ss_pred e-------------------CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecC--CCCCeEEEEE--CCCC
Q psy15549 148 D-------------------DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRG--HLEDVYDISW--SPTS 204 (621)
Q Consensus 148 s-------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~i~~--spd~ 204 (621)
. .+.+|.+||+.+++.+. .+.. .......+.| +|++
T Consensus 206 ~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~---------------------tI~vg~~g~~P~~i~f~~~Pdg 264 (462)
T 2ece_A 206 EWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH---------------------SLTLGEENRMALELRPLHDPTK 264 (462)
T ss_dssp BCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE---------------------EEESCTTEEEEEEEEECSSTTC
T ss_pred cCcCccccccccchhhhhhccCCEEEEEECCCCcEee---------------------EEecCCCCCccceeEeeECCCC
Confidence 4 36799999999865432 2221 1223455555 9999
Q ss_pred CEEEEEeC------CCeEEEEECCCCcE--EEE--eccC----------------CcceEEEEEcCCCCEEEEEeC-CCc
Q psy15549 205 THLISGSV------DNTAIMWDVHKGKN--LGI--LTEH----------------KKFVQGVAWDPKNQYVATLSS-DRS 257 (621)
Q Consensus 205 ~~l~s~~~------dg~i~vwd~~~~~~--~~~--~~~~----------------~~~v~~l~~sp~~~~l~s~~~-dg~ 257 (621)
+++++++. +++|.+|....+.. .+. +... ......+.++|||++|+++.. .+.
T Consensus 265 ~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~ 344 (462)
T 2ece_A 265 LMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE 344 (462)
T ss_dssp CEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE
T ss_pred CEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCE
Confidence 98888774 56888776655421 111 1110 234678999999999988776 689
Q ss_pred EEEEEccC---ceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 258 LRTYSIQS---KKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 258 i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
|.+||+.. .+.+..+.....- ...+ .. ........-+.++++|||++|+++.
T Consensus 345 VavfdV~d~~~~~lv~~I~tGG~~-----~~~~---~~-~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 345 VRQYDISNPFKPVLTGKVKLGGIF-----HRAD---HP-AGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEECSSTTSCEEEEEEECBTTT-----TCBC---CT-TSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEEecCCCCcEEEEEEEeCCee-----cccc---cc-ccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999863 3444443321100 0000 00 0011122347899999999999876
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=99.07 E-value=9.2e-08 Score=95.27 Aligned_cols=309 Identities=11% Similarity=0.037 Sum_probs=164.5
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEcCCceEEEEecc
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTE 111 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~ 111 (621)
.|++++.++.|..||..+.+. +|.......... .......+.+.-...++.+++...++.+..+|..+
T Consensus 55 ~v~~~~~~g~v~a~d~~tG~~-----~W~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~t 122 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADDGKE-----IWSVSLAEKDGW-------FSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSD 122 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCE-----EEEEECCC---C-------CSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTT
T ss_pred EEEEEcCCCeEEEEEccCCce-----eeeecCcccccc-------ccccCcccccCceEeCCEEEEEcCCCEEEEEECCC
Confidence 788888899999666655543 565543221000 00001223222222344444444477888888877
Q ss_pred CccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCC
Q psy15549 112 RESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGH 191 (621)
Q Consensus 112 ~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (621)
+. ................. .+..++.++.++.|..+|..+++.+..+..... .......
T Consensus 123 G~-------~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~------------~~~~~~~ 181 (376)
T 3q7m_A 123 GT-------VAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMP------------SLSLRGE 181 (376)
T ss_dssp CC-------EEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----------------CCC
T ss_pred CC-------EEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCC------------ceeecCC
Confidence 63 22222211111111112 245788888899999999988875421100000 0000001
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcc----------e-EEEEEcCCCCEEEEEeCCCcEEE
Q psy15549 192 LEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF----------V-QGVAWDPKNQYVATLSSDRSLRT 260 (621)
Q Consensus 192 ~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~----------v-~~l~~sp~~~~l~s~~~dg~i~i 260 (621)
.. ... .+..+++++.++.|..+|..+++.+......... + ..... .+..++.++.++.+..
T Consensus 182 ~~----~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~ 253 (376)
T 3q7m_A 182 SA----PTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTA 253 (376)
T ss_dssp CC----CEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEE
T ss_pred CC----cEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEE
Confidence 11 111 1346788888999999999999987766432110 0 11111 2566777888999999
Q ss_pred EEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeec
Q psy15549 261 YSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRA 340 (621)
Q Consensus 261 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~ 340 (621)
+|..+++.+...... ....+.. ++..+++++ .++.+..++.......-
T Consensus 254 ~d~~tG~~~w~~~~~-------------------------~~~~~~~--~~~~l~~~~-----~~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 254 LDLRSGQIMWKRELG-------------------------SVNDFIV--DGNRIYLVD-----QNDRVMALTIDGGVTLW 301 (376)
T ss_dssp EETTTCCEEEEECCC-------------------------CEEEEEE--ETTEEEEEE-----TTCCEEEEETTTCCEEE
T ss_pred EECCCCcEEeeccCC-------------------------CCCCceE--ECCEEEEEc-----CCCeEEEEECCCCcEEE
Confidence 999999877654311 0122222 244555555 45555555532111000
Q ss_pred ccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceE-EEE
Q psy15549 341 CLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLT-DIT 419 (621)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~-~~~ 419 (621)
........ ....|. ..++.+++++.+|.|+.+|..+++.+..... ....+. ...
T Consensus 302 -------~~~~~~~~---~~~~~~--------------~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~-~~~~~~~~~~ 356 (376)
T 3q7m_A 302 -------TQSDLLHR---LLTSPV--------------LYNGNLVVGDSEGYLHWINVEDGRFVAQQKV-DSSGFQTEPV 356 (376)
T ss_dssp -------EECTTTTS---CCCCCE--------------EETTEEEEECTTSEEEEEETTTCCEEEEEEC-CTTCBCSCCE
T ss_pred -------eecccCCC---cccCCE--------------EECCEEEEEeCCCeEEEEECCCCcEEEEEec-CCCcceeCCE
Confidence 00000000 000011 1246788888999999999999998877643 222222 222
Q ss_pred EcCCCCeEEEEeCCCcEEEEE
Q psy15549 420 WSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 420 ~spdg~~l~s~s~dg~i~iw~ 440 (621)
. .+..|+.++.+|.|+.|+
T Consensus 357 ~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 357 A--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp E--ETTEEEEEBTTSCEEEEE
T ss_pred E--ECCEEEEEeCCCEEEEEe
Confidence 2 245788888999999987
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.5e-08 Score=108.65 Aligned_cols=388 Identities=11% Similarity=0.036 Sum_probs=197.1
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEec
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLT 110 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~ 110 (621)
.|++++.++.|..+|..+.+. +|.......... ......+ .....+++ ++..|+.++ ++.+..+|..
T Consensus 79 ~vyv~~~~~~v~AlD~~tG~~-----~W~~~~~~~~~~----~~~~~~~-~~~~~~a~--~~~~v~v~~~dg~l~alD~~ 146 (677)
T 1kb0_A 79 IMYVSASWSVVHAIDTRTGNR-----IWTYDPQIDRST----GFKGCCD-VVNRGVAL--WKGKVYVGAWDGRLIALDAA 146 (677)
T ss_dssp EEEEECGGGCEEEEETTTTEE-----EEEECCCCCGGG----GGGSSSC-SCCCCCEE--ETTEEEEECTTSEEEEEETT
T ss_pred EEEEECCCCeEEEEECCCCcE-----EEEEcCCCCccc----ccccccc-CCCCCceE--ECCEEEEEcCCCEEEEEECC
Confidence 677777788888777766654 777654432110 0000000 00011222 244555544 7778888877
Q ss_pred cCccccccceeccccccc-C----CCeEE-EEECCCCCEEEEEeC------CCcEEEEEccCCCCCCCCCCCCccc-cc-
Q psy15549 111 ERESGIANVEFASDLSRH-Q----KAVNV-VRFSPNGELLASGDD------ESTIIVWKQKTDQDLPEFPSSNLDE-EN- 176 (621)
Q Consensus 111 ~~~~~~~~~~~~~~~~~h-~----~~V~~-i~~sp~g~~l~s~s~------dg~i~vwd~~~~~~~~~~~~~~~~~-~~- 176 (621)
++. .+..+..+ . ..+.. ... .+..++.++. ++.|+.||..+++.+-.+....... ..
T Consensus 147 tG~-------~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~ 217 (677)
T 1kb0_A 147 TGK-------EVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPF 217 (677)
T ss_dssp TCC-------EEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCC
T ss_pred CCC-------EEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccc
Confidence 663 22222211 0 11111 111 2345555543 6899999999998764332111000 00
Q ss_pred ------ccccceee-eeee--cCCCCCeEEEEECCCCCEEEEEeCCC-------------------eEEEEECCCCcEEE
Q psy15549 177 ------VNKEHWIV-TKIL--RGHLEDVYDISWSPTSTHLISGSVDN-------------------TAIMWDVHKGKNLG 228 (621)
Q Consensus 177 ------~~~~~~~~-~~~~--~~~~~~v~~i~~spd~~~l~s~~~dg-------------------~i~vwd~~~~~~~~ 228 (621)
.....|.. ...+ .+.......++++|++.+++.++.++ .|..+|..+|+.+.
T Consensus 218 ~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W 297 (677)
T 1kb0_A 218 EDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKW 297 (677)
T ss_dssp SSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEE
T ss_pred cccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEE
Confidence 00001100 0000 01222234678889888888887664 59999999999987
Q ss_pred Eecc--CC-------cceEEEEEcCCC---CEEEEEeCCCcEEEEEccCceeeeecccCCCCCC-----Cccccccccc-
Q psy15549 229 ILTE--HK-------KFVQGVAWDPKN---QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVD-----SSHELFDKVV- 290 (621)
Q Consensus 229 ~~~~--~~-------~~v~~l~~sp~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~- 290 (621)
.+.. |. .....+....+| ..++.++.+|.|+++|..+++.+..+.....+.. .+........
T Consensus 298 ~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~ 377 (677)
T 1kb0_A 298 HYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAAR 377 (677)
T ss_dssp EEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGG
T ss_pred EEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccC
Confidence 7643 21 112223333467 6788999999999999999999877653322110 0000000000
Q ss_pred ------cccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcc-cceeeeeccc
Q psy15549 291 ------PLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQ-YYSVAVKCCP 363 (621)
Q Consensus 291 ------~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 363 (621)
.++-.......-..++|+|++.++++.. .+.....+... .+.. ........... .......+..
T Consensus 378 ~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~-----~~~~~~~~~~~-~~~~---g~~~~~~~~~~~~~~~g~~~~~ 448 (677)
T 1kb0_A 378 DGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPA-----QNVPVNLMDDK-KWEF---NQAGPGKPQSGTGWNTAKFFNA 448 (677)
T ss_dssp CTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEE-----EECCCEEEECT-TCCT---TCCCTTSTTGGGTCCCCEEECS
T ss_pred cCCCccEECcCcccccCCCCceEcCCCCEEEEeC-----hhcceeeeccc-cccc---cccccccccccccccccccccc
Confidence 0000000001113688999988888765 22211111110 0000 00000000000 0000000000
Q ss_pred eeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 364 VLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
.+ .+ ....+.|..||+.+++.+-.+. +..++....++.++..++.++.||.+++||..+
T Consensus 449 -----~~--------~~------~~~~g~l~A~D~~tG~~~W~~~--~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 449 -----EP--------PK------SKPFGRLLAWDPVAQKAAWSVE--HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp -----SC--------CC------SCCEEEEEEEETTTTEEEEEEE--ESSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred -----cc--------CC------CCCccEEEEEeCCCCcEEeecC--CCCCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 00 00 0124789999999999887774 334555666777888899999999999999999
Q ss_pred CcCCcccCCCCCc-ccccCCCCCCCCcc
Q psy15549 444 NEIGIPYVPPSGE-ESKENDPTKGEPVR 470 (621)
Q Consensus 444 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 470 (621)
|+.+..+..+.+. ...+.+..+|+.++
T Consensus 508 G~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 508 GEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp CCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 9988877665432 22233346666444
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=4.1e-08 Score=105.24 Aligned_cols=64 Identities=11% Similarity=0.133 Sum_probs=47.1
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEE-EEeC----------------CCcEEEEEec
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLI-ASST----------------DGYCSIISFG 442 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~-s~s~----------------dg~i~iw~~~ 442 (621)
.++.++.++.+|.+++||..+++.+..+..++.....-+.|..+|+.++ +.+. .+.+.+|.+.
T Consensus 487 ~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEecc
Confidence 4577888888999999999999999988765544445567778887544 3322 3677777776
Q ss_pred C
Q psy15549 443 D 443 (621)
Q Consensus 443 ~ 443 (621)
.
T Consensus 567 ~ 567 (677)
T 1kb0_A 567 G 567 (677)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.02 E-value=1e-07 Score=102.30 Aligned_cols=51 Identities=12% Similarity=0.155 Sum_probs=38.9
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCe-EEEE
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKV-LIAS 430 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~-l~s~ 430 (621)
.++.++.++.|+.|+.||..+|+.+..+..++.....-+.|..+|+. +++.
T Consensus 485 agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 485 AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 45788888999999999999999998886544444455777889874 4444
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.99 E-value=1.7e-08 Score=98.79 Aligned_cols=213 Identities=7% Similarity=-0.112 Sum_probs=122.0
Q ss_pred eEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc-----------CCceEEEEeccCccccccceeccccc
Q psy15549 58 IWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-----------DVGKEIWYLTERESGIANVEFASDLS 126 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-----------d~~v~iw~~~~~~~~~~~~~~~~~~~ 126 (621)
+.|..+.+... ++.....+ .+.++|||++++++. ++.|.+||..+. +....+.
T Consensus 50 vID~~t~~v~~-------~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~-------~vv~~I~ 113 (368)
T 1mda_H 50 VSCAGCGVTLG-------HSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF-------LPIADIE 113 (368)
T ss_dssp EEETTTTEEEE-------EEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-------CEEEEEE
T ss_pred EEECCCCeEEE-------EEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-------CEEEEEE
Confidence 66666554322 23333344 799999999888874 567999999887 3344443
Q ss_pred cc-------CCCeEEEEECCCCCEEEEEeC--CCcEEE--EEccCCCCCCCCCCCCc-cccccccc---------ceeee
Q psy15549 127 RH-------QKAVNVVRFSPNGELLASGDD--ESTIIV--WKQKTDQDLPEFPSSNL-DEENVNKE---------HWIVT 185 (621)
Q Consensus 127 ~h-------~~~V~~i~~sp~g~~l~s~s~--dg~i~v--wd~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~~ 185 (621)
-+ ......++|+|||++|+++.. +..|.+ +|+.+ +..++.... ........ .+...
T Consensus 114 v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 114 LPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp ETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEE
T ss_pred CCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEE
Confidence 22 123557999999999998864 457888 88866 222211100 00000000 00000
Q ss_pred e-----------------eecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEecc-------CC---cc
Q psy15549 186 K-----------------ILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK--NLGILTE-------HK---KF 236 (621)
Q Consensus 186 ~-----------------~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~-------~~---~~ 236 (621)
. ...-...+. . ++++..++..+. +.|.+.|+.+.. .+..+.. +. ..
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g 265 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS
T ss_pred ECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCc
Confidence 0 000011122 2 555566666666 899999986532 2222211 11 11
Q ss_pred eEEEEEcCCCCEEEEEeC-C--------CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 237 VQGVAWDPKNQYVATLSS-D--------RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~-d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
...++++|++++++++.. . +.+.++|+.+++.+..+... .....++|
T Consensus 266 ~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg------------------------~~p~gi~~ 321 (368)
T 1mda_H 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG------------------------HDSDAIIA 321 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE------------------------EEECEEEE
T ss_pred ceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC------------------------CCcceEEE
Confidence 222789999998887643 2 35669999999988776422 13478999
Q ss_pred cCCCCeEEecc
Q psy15549 308 SPDGQLLIAPS 318 (621)
Q Consensus 308 spdg~~l~~~s 318 (621)
+|||++++++.
T Consensus 322 s~Dg~~l~va~ 332 (368)
T 1mda_H 322 AQDGASDNYAN 332 (368)
T ss_dssp CCSSSCEEEEE
T ss_pred CCCCCEEEEEc
Confidence 99998665543
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=6e-11 Score=117.75 Aligned_cols=188 Identities=12% Similarity=0.034 Sum_probs=107.1
Q ss_pred CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q psy15549 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMW 219 (621)
Q Consensus 140 ~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vw 219 (621)
++..+++++.||.|+.||..+++.+. . +.. ..+.+..+..++..+++++.||.|+.|
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W-----------------~----~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~ 64 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKW-----------------T----LKE--DPVLQVPTHVEEPAFLPDPNDGSLYTL 64 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEE-----------------E----EEC--CCSCCCC-----CCEEECTTTCCEEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEE-----------------E----ecC--CCceecceEcCCCEEEEeCCCCEEEEE
Confidence 57789999999999999999998642 1 122 334444455677788888899999999
Q ss_pred ECCCCcEEEEeccCCcc-eE-EEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCC
Q psy15549 220 DVHKGKNLGILTEHKKF-VQ-GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDT 297 (621)
Q Consensus 220 d~~~~~~~~~~~~~~~~-v~-~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (621)
|..+|+.+..+..+... +. +..+. .+..|++++.++.|+.||..+|+.+..+..+.
T Consensus 65 d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--------------------- 122 (369)
T 2hz6_A 65 GSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--------------------- 122 (369)
T ss_dssp -----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC---------------------------------
T ss_pred ECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---------------------
Confidence 99999887666443211 11 11111 34567788889999999999988765442100
Q ss_pred cccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCc
Q psy15549 298 MKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLF 377 (621)
Q Consensus 298 ~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (621)
...++|
T Consensus 123 ------~~~~~p-------------------------------------------------------------------- 128 (369)
T 2hz6_A 123 ------ADSLSP-------------------------------------------------------------------- 128 (369)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------cccccc--------------------------------------------------------------------
Confidence 011112
Q ss_pred cCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCC---CeEEEEeCCCcEEEEEecCCcCCcccC
Q psy15549 378 KLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDG---KVLIASSTDGYCSIISFGDNEIGIPYV 451 (621)
Q Consensus 378 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg---~~l~s~s~dg~i~iw~~~~~~~~~~~~ 451 (621)
.++.+++++.++.|+.||..+++.+..+.. + .....+++.++ ..+++++.||.|+.||..+|+..-...
T Consensus 129 --~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 129 --STSLLYLGRTEYTITMYDTKTRELRWNATY-F--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp ------EEEEEEEEEEECCCSSSSSCCCEEEE-E--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred --cCCEEEEEecCCEEEEEECCCCCEEEeEec-c--cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 124566677788999999999987665532 1 12233444432 567788899999999999998765544
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-06 Score=81.27 Aligned_cols=156 Identities=12% Similarity=0.054 Sum_probs=99.6
Q ss_pred CcEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEE-EeCCCcEEEEEc
Q psy15549 82 KAVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS-GDDESTIIVWKQ 158 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s-~s~dg~i~vwd~ 158 (621)
..+..++|++++..|..+. .+.|..++..... ....+.........+++++++..|+. -...+.|.++++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-------~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~ 108 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-------PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKM 108 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-------CEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC-------cEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEc
Confidence 4578999999777666655 5678888876432 11111122246789999997655554 445678999998
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC---CCeEEEEECCCCcEEEEe-ccCC
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV---DNTAIMWDVHKGKNLGIL-TEHK 234 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~---dg~i~vwd~~~~~~~~~~-~~~~ 234 (621)
+..... ............++++|++..|+.+.. .+.|..+++... ....+ ....
T Consensus 109 ~g~~~~---------------------~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~ 166 (267)
T 1npe_A 109 DGTQRR---------------------VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNL 166 (267)
T ss_dssp TSCSCE---------------------EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTC
T ss_pred CCCCEE---------------------EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCC
Confidence 654311 111122245789999997666665554 368888887543 22222 2233
Q ss_pred cceEEEEEcCCCCEEEEEeC-CCcEEEEEccCc
Q psy15549 235 KFVQGVAWDPKNQYVATLSS-DRSLRTYSIQSK 266 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~~-dg~i~iwd~~~~ 266 (621)
.....++++|++..|+.+.. .+.|.++|+...
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred CCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 45789999998877766554 578999998653
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=5.6e-10 Score=110.75 Aligned_cols=147 Identities=12% Similarity=0.118 Sum_probs=74.2
Q ss_pred CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 92 NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 92 dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
++..|++++ ++.+..||..++ +....+.. +.+.+..+..++..+++++.||.|+.||..+++.+..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG-------~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG-------SIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC-------CEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC
T ss_pred eCCEEEEEcCCCEEEEEECCCC-------CEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 456666666 888999998877 33333333 34545555667778888889999999999888764222100
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEE
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVA 250 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~ 250 (621)
. .... ...++ +. ++..+++++.++.|+.||..+|+.+..+..+. ...++|++..++
T Consensus 79 ~--------------~~~~-~~sp~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~ 134 (369)
T 2hz6_A 79 I--------------PELV-QASPC----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLY 134 (369)
T ss_dssp H--------------HHHH-TTCSC----C------CCCCEEEEEEEEECCC--------------------------EE
T ss_pred C--------------cccc-ccCce----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEE
Confidence 0 0000 01111 11 34467788889999999999999887776543 234567888999
Q ss_pred EEeCCCcEEEEEccCceeeee
Q psy15549 251 TLSSDRSLRTYSIQSKKVISR 271 (621)
Q Consensus 251 s~~~dg~i~iwd~~~~~~~~~ 271 (621)
+++.|+.|+.||..+++.+..
T Consensus 135 ~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 135 LGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp EEEEEEEEECCCSSSSSCCCE
T ss_pred EEecCCEEEEEECCCCCEEEe
Confidence 999999999999998876543
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.89 E-value=1.4e-07 Score=94.05 Aligned_cols=240 Identities=7% Similarity=-0.028 Sum_probs=134.4
Q ss_pred CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q psy15549 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMW 219 (621)
Q Consensus 140 ~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vw 219 (621)
++..++.++.++.|..+|..+++.+..+ ............ .+..+++++.++.|..+
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~---------------------~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~ 158 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQT---------------------KVAGEALSRPVV--SDGLVLIHTSNGQLQAL 158 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEE---------------------ECSSCCCSCCEE--ETTEEEEECTTSEEEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEE---------------------eCCCceEcCCEE--ECCEEEEEcCCCeEEEE
Confidence 4567888888999999999988754111 111110111111 24478888889999999
Q ss_pred ECCCCcEEEEeccCCcce-----EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccc
Q psy15549 220 DVHKGKNLGILTEHKKFV-----QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFH 294 (621)
Q Consensus 220 d~~~~~~~~~~~~~~~~v-----~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (621)
|..+|+.+.......... ...... +..+++++.++.|..+|..+++.+..............
T Consensus 159 d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~----------- 225 (376)
T 3q7m_A 159 NEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEI----------- 225 (376)
T ss_dssp ETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC------------------
T ss_pred ECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCccc-----------
Confidence 999999887765432211 122222 45677788899999999999988766542211000000
Q ss_pred cCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCC
Q psy15549 295 DDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDK 374 (621)
Q Consensus 295 ~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (621)
...........+ .+..+++++ .++.+..++.......- ...... ... +
T Consensus 226 -~~~~~~~~~p~~--~~~~v~~~~-----~~g~l~~~d~~tG~~~w-------~~~~~~--~~~----~----------- 273 (376)
T 3q7m_A 226 -DRLSDVDTTPVV--VNGVVFALA-----YNGNLTALDLRSGQIMW-------KRELGS--VND----F----------- 273 (376)
T ss_dssp -----CCCCCCEE--ETTEEEEEC-----TTSCEEEEETTTCCEEE-------EECCCC--EEE----E-----------
T ss_pred -ccccccCCCcEE--ECCEEEEEe-----cCcEEEEEECCCCcEEe-------eccCCC--CCC----c-----------
Confidence 000000000111 123444444 34444444432110000 000000 000 1
Q ss_pred CCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCC
Q psy15549 375 PLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP 452 (621)
Q Consensus 375 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~ 452 (621)
...++.+++++.++.|+.+|..+++.+..........+..... .+..|+.++.+|.|.++|..++++......
T Consensus 274 ---~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 274 ---IVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp ---EEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ---eEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 0134778888899999999999999877664222223333333 256788898999999999999987665544
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.89 E-value=3.2e-08 Score=100.68 Aligned_cols=95 Identities=13% Similarity=0.071 Sum_probs=70.9
Q ss_pred CCCEEEEEeC-CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeec-CCCCCeEEEEE-C-CCCCEEEEEe----
Q psy15549 140 NGELLASGDD-ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR-GHLEDVYDISW-S-PTSTHLISGS---- 211 (621)
Q Consensus 140 ~g~~l~s~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~~-s-pd~~~l~s~~---- 211 (621)
||++|+.+.. ++.|.+.|+.+.+.. ..+. .....+..+++ + |+++++++++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~---------------------~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~ 158 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCD---------------------AILEIPNAKGIHGLRPQKWPRSNYVFCNGEDET 158 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEE---------------------EEEECSSCCSEEEEEECCSSBCSEEEEEECSCE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEe---------------------eEEeCCCCCCCcceeeeecCCCcEEEEeccccc
Confidence 7888877665 457999999998754 2111 23345788888 5 8999998885
Q ss_pred --------------CCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCC
Q psy15549 212 --------------VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDR 256 (621)
Q Consensus 212 --------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg 256 (621)
.++.+.++|..+.+.+.++.-.. ....++++|+|+++++.+.+.
T Consensus 159 p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~s 216 (595)
T 1fwx_A 159 PLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNS 216 (595)
T ss_dssp ESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCT
T ss_pred ccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCc
Confidence 24679999999998888875333 456788999999999888653
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.8e-06 Score=93.56 Aligned_cols=335 Identities=10% Similarity=0.061 Sum_probs=188.0
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
..|.+|...++|. |..|+.+| +. .||..+..-... . .........|.++...++|
T Consensus 88 n~I~~i~~d~~g~------lWigT~~G-l~--------------~yd~~~~~f~~~--~--~~~~~~~~~i~~i~~d~~g 142 (795)
T 4a2l_A 88 DISRIVKTDSQGR------VWIGTRDG-LS--------------RYDEEKDIFQNF--F--YEKNGKHLQVNGIEEISPE 142 (795)
T ss_dssp SCEEEEEECTTSC------EEEEESSC-EE--------------EEETTTTEEEEE--C--CEETTEECCCCEEEEEETT
T ss_pred cceeEEEECCCCC------EEEEeCCc-hh--------------eeCCCCCeEEec--c--ccccCCCceEEEEEECCCC
Confidence 4699999999984 55566666 45 566543321100 0 0000000128889888888
Q ss_pred CEEEEEcCCceEEEEeccCccccccceeccccccc-CCC-eEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 94 ELLASGDDVGKEIWYLTERESGIANVEFASDLSRH-QKA-VNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~-V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
.+.+... +++.+|+...+ ........+ ... |.++...+++.+.+ ++.++.|..|+..+++....
T Consensus 143 ~lwi~t~-~gl~~~~~~~~-------~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~----- 208 (795)
T 4a2l_A 143 QLLISTP-EGLIMFDIKES-------KFIDDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKV----- 208 (795)
T ss_dssp EEEEEET-TEEEEEETTTT-------EEECSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTCCEEEC-----
T ss_pred CEEEEEC-CceEEEECCCC-------EEEeccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEe-----
Confidence 8776554 77888886554 111111111 123 88888887776554 55554588898776542100
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc-------CCcceEEEEEcC
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE-------HKKFVQGVAWDP 244 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-------~~~~v~~l~~sp 244 (621)
....+...|.++...+++.+.+ |+.++-|.+||..+++....... ....|.++...+
T Consensus 209 ---------------~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~ 272 (795)
T 4a2l_A 209 ---------------IPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDS 272 (795)
T ss_dssp ---------------C----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECT
T ss_pred ---------------cCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcC
Confidence 0012345688888887776444 55444589999877654433221 135699999998
Q ss_pred CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCC
Q psy15549 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENS 324 (621)
Q Consensus 245 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~ 324 (621)
+|.+.+ |+.+ -|.+||..++...........+ .......|.++...++|...+...
T Consensus 273 ~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~----------------~~l~~~~i~~i~~D~~g~lWigt~------ 328 (795)
T 4a2l_A 273 QNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVEN----------------GSLSQRSVRSIFMDSQGGMWLGTY------ 328 (795)
T ss_dssp TSCEEE-EESS-CEEEEETTTTEEEEECCCTTST----------------TSCSSSCEEEEEECTTSCEEEEES------
T ss_pred CCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCC----------------CCCCCCcEEEEEEeCCcCEEEEEC------
Confidence 888655 5555 5889998776543322110000 011234578999999998666443
Q ss_pred CCCCcceeeeee-eeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCce
Q psy15549 325 DSTRKPISVTHV-FTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP 403 (621)
Q Consensus 325 d~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 403 (621)
++.+..++.... +...........+ ....+.++... .++.+.+|+.++-|..||..++..
T Consensus 329 ~~Gl~~~~~~~~~~~~~~~~~~~~~l--~~~~V~~i~~d-----------------~~g~lWiGt~~~Gl~~~~~~~~~~ 389 (795)
T 4a2l_A 329 FGGLNYYHPIRNRFKNIRNIPYKNSL--SDNVVSCIVED-----------------KDKNLWIGTNDGGLNLYNPITQRF 389 (795)
T ss_dssp SSCEEEECGGGGSSEEECCCTTSSSC--SCSSEEEEEEC-----------------TTSCEEEEESSSCEEEECTTTCCE
T ss_pred CCCeEEeCCCcccceEEcCCCCCCCC--CCCeeEEEEEC-----------------CCCCEEEEECCCCeEEEcCCCCcE
Confidence 333444432110 0000000000000 11122222221 235577788888899999887754
Q ss_pred eEEEec-------ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcC
Q psy15549 404 FAFIAN-------IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 404 ~~~~~~-------~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~ 446 (621)
...... .....|.+++..++|+.|..|+.++-|.+|+..+++.
T Consensus 390 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~ 439 (795)
T 4a2l_A 390 TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV 439 (795)
T ss_dssp EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE
T ss_pred EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE
Confidence 333211 1235799999999998566677777799999887654
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.87 E-value=1.5e-06 Score=81.70 Aligned_cols=150 Identities=12% Similarity=0.009 Sum_probs=90.5
Q ss_pred CCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEE-eCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 93 GELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG-DDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 93 g~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~-s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
|.+|+.+..+.|+.+++........ .....+......+..++|++++..|+.+ ...+.|.++++......
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~--~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~------- 71 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKT--EAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT------- 71 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGG--GCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-------
T ss_pred CcEEEEEcCCeEEEEEecCcccccc--cceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-------
Confidence 4566666666777787765421100 0001111122457789999976655544 45789999998765421
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEE
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVA 250 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~ 250 (621)
............+++++++..|+.+. ..+.|.++++..................++++|++..|+
T Consensus 72 --------------~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~ly 137 (267)
T 1npe_A 72 --------------TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLY 137 (267)
T ss_dssp --------------EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEE
T ss_pred --------------EEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEE
Confidence 11222235678999999766555554 467999999864433222222224568999999777666
Q ss_pred EEeC---CCcEEEEEccC
Q psy15549 251 TLSS---DRSLRTYSIQS 265 (621)
Q Consensus 251 s~~~---dg~i~iwd~~~ 265 (621)
.+.. .+.|..+++..
T Consensus 138 v~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 138 WTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp EEECCSSSCEEEEEETTS
T ss_pred EEECCCCCcEEEEEecCC
Confidence 5554 36788887753
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.83 E-value=5.5e-08 Score=94.89 Aligned_cols=270 Identities=10% Similarity=0.004 Sum_probs=151.8
Q ss_pred EEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 86 VVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 86 ~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
++.+..+|.+.+...++++..|+ ..+ ........+...+.++...+++. |..++.+ |..+|. +++...
T Consensus 24 ~~~~d~~g~l~v~t~~~~l~~~d-~~g-------~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~ 91 (330)
T 3hxj_A 24 SPILAKNGTIYLGSSNKNLYAIN-TDG-------SVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKW 91 (330)
T ss_dssp CCEECTTSCEECSSTTTTTEEEC-TTS-------CEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGG
T ss_pred CceEccCCeEEEEcCCCEEEEEC-CCC-------cEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEE
Confidence 34455677665555588899999 655 22333333344556777777765 4455544 888885 444332
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~ 245 (621)
.+ ...........+. +..|..++.++.|..+|.. ++.......+...+.++...++
T Consensus 92 ~~---------------------~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~ 147 (330)
T 3hxj_A 92 RF---------------------DTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSED 147 (330)
T ss_dssp GS---------------------CC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTT
T ss_pred EE---------------------ECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCC
Confidence 21 1111111122222 4567788889999999988 7777666655556677777777
Q ss_pred CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCC
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSD 325 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d 325 (621)
+. |+.++.++.|..||.. ++.+..+... ...+.++.+.+++..++.. +
T Consensus 148 g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~-----------------------~~~~~~~~~d~~g~l~v~t-~------ 195 (330)
T 3hxj_A 148 GT-IYVGSNDNYLYAINPD-GTEKWRFKTN-----------------------DAITSAASIGKDGTIYFGS-D------ 195 (330)
T ss_dssp SC-EEEECTTSEEEEECTT-SCEEEEEECS-----------------------SCCCSCCEECTTCCEEEES-S------
T ss_pred CE-EEEEcCCCEEEEECCC-CCEeEEEecC-----------------------CCceeeeEEcCCCEEEEEe-C------
Confidence 77 5557788999999988 7665544311 1123566777777766543 2
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA 405 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 405 (621)
.+..++.. . ............+. .+....++.+.+++.++.|..+|. +++.+.
T Consensus 196 -~l~~~d~~-g-------~~~~~~~~~~~~~~-----------------~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~ 248 (330)
T 3hxj_A 196 -KVYAINPD-G-------TEKWNFYAGYWTVT-----------------RPAISEDGTIYVTSLDGHLYAINP-DGTEKW 248 (330)
T ss_dssp -SEEEECTT-S-------CEEEEECCSSCCCS-----------------CCEECTTSCEEEEETTTEEEEECT-TSCEEE
T ss_pred -EEEEECCC-C-------cEEEEEccCCccee-----------------ceEECCCCeEEEEcCCCeEEEECC-CCCEeE
Confidence 22222200 0 00000000000011 111123346777888889999974 555555
Q ss_pred EEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCC
Q psy15549 406 FIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPP 453 (621)
Q Consensus 406 ~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~ 453 (621)
.+.. ....+..+.+.++| .|..++.+|.|..++. +++....+...
T Consensus 249 ~~~~-~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~ 293 (330)
T 3hxj_A 249 RFKT-GKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETG 293 (330)
T ss_dssp EEEC-SSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECS
T ss_pred EeeC-CCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcC
Confidence 5432 33344556666666 4667778888999985 56655444433
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=1.2e-06 Score=80.85 Aligned_cols=201 Identities=12% Similarity=0.069 Sum_probs=129.6
Q ss_pred CeEEEEECCCCCEEEEEeC--CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE
Q psy15549 131 AVNVVRFSPNGELLASGDD--ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 131 ~V~~i~~sp~g~~l~s~s~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~ 208 (621)
....+.|++++.++++.+. ++.|+++|+.+++.+..+ .+ +.......+++. +..|+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i-------------------~l-~~~~fgeGi~~~--g~~ly 79 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIH-------------------KM-DDSYFGEGLTLL--NEKLY 79 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEE-------------------EC-CTTCCEEEEEEE--TTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEE-------------------ec-CCCcceEEEEEe--CCEEE
Confidence 3578999998755555443 579999999999864322 11 111222345554 44555
Q ss_pred EEe-CCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccc
Q psy15549 209 SGS-VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFD 287 (621)
Q Consensus 209 s~~-~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (621)
.+. .++.+.++|..+++.+.++...... ...+++||+.|+++..++.|.++|..+.+.+..+.....+
T Consensus 80 v~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~--------- 148 (266)
T 2iwa_A 80 QVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG--------- 148 (266)
T ss_dssp EEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT---------
T ss_pred EEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC---------
Confidence 444 5789999999999999888533111 2345667887777777889999999998877665321100
Q ss_pred ccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeee
Q psy15549 288 KVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFE 367 (621)
Q Consensus 288 ~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (621)
..-..+..+.|. +|. +++
T Consensus 149 ---------~p~~~~nele~~-dg~-lyv--------------------------------------------------- 166 (266)
T 2iwa_A 149 ---------HRVIRLNELEYI-NGE-VWA--------------------------------------------------- 166 (266)
T ss_dssp ---------EECCCEEEEEEE-TTE-EEE---------------------------------------------------
T ss_pred ---------cccccceeEEEE-CCE-EEE---------------------------------------------------
Confidence 000012334444 332 221
Q ss_pred cCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecc-c-----------ccceEEEEEcCCCCe-EEEEeCCC
Q psy15549 368 LKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANI-H-----------YTKLTDITWSSDGKV-LIASSTDG 434 (621)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h-----------~~~v~~~~~spdg~~-l~s~s~dg 434 (621)
....++.|.+.|..+++.+..+..+ . ......|+|+|+++. ++++...+
T Consensus 167 ------------------n~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 167 ------------------NIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp ------------------EETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred ------------------ecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 1124578999999999988888532 1 135689999999874 55666788
Q ss_pred cEEEEEecCC
Q psy15549 435 YCSIISFGDN 444 (621)
Q Consensus 435 ~i~iw~~~~~ 444 (621)
.|+..++...
T Consensus 229 ~v~~i~l~~~ 238 (266)
T 2iwa_A 229 KLFEIKLHLV 238 (266)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEEecc
Confidence 9999998864
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=7.2e-05 Score=82.28 Aligned_cols=343 Identities=8% Similarity=0.016 Sum_probs=190.5
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
..|.++...++|. |..|+.+| |. +|+..++..............-....|.++...++|
T Consensus 263 ~~i~~i~~d~~g~------lWigt~~G-l~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g 321 (795)
T 4a2l_A 263 NYIRSLAMDSQNR------LWIGTFND-LN--------------IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG 321 (795)
T ss_dssp SBEEEEEECTTSC------EEEEESSC-EE--------------EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS
T ss_pred CeEEEEEEcCCCC------EEEEeCCh-hh--------------eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc
Confidence 4689999988884 44455555 55 555433221100000000011124679999999999
Q ss_pred CEEEEEcCCceEEEEeccCccccccceecccc----cccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 94 ELLASGDDVGKEIWYLTERESGIANVEFASDL----SRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~----~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
.+-+...++++.+|+.....- ...... .-....|.++...++|.+ ..|+.++-|..|+..++....-...
T Consensus 322 ~lWigt~~~Gl~~~~~~~~~~-----~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~ 395 (795)
T 4a2l_A 322 GMWLGTYFGGLNYYHPIRNRF-----KNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQ 395 (795)
T ss_dssp CEEEEESSSCEEEECGGGGSS-----EEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC
T ss_pred CEEEEECCCCeEEeCCCcccc-----eEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecC
Confidence 987766688999998654321 111110 012356999999888864 4567776799998776542100000
Q ss_pred CCcccccccccceeeeeee-cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec----cCCcceEEEEEcC
Q psy15549 170 SNLDEENVNKEHWIVTKIL-RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT----EHKKFVQGVAWDP 244 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~----~~~~~v~~l~~sp 244 (621)
. .... .-....|.++...++++.|..|+.++-|.+||..+++...... .....|.++...+
T Consensus 396 ~--------------~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~ 461 (795)
T 4a2l_A 396 E--------------DESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG 461 (795)
T ss_dssp --------------------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS
T ss_pred C--------------CCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC
Confidence 0 0000 0123569999998888757778877789999998876543321 1345789999988
Q ss_pred CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCC
Q psy15549 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENS 324 (621)
Q Consensus 245 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~ 324 (621)
+|.+.+ |+.+ -|.+||..+++....... ..+ .......|.++...++|...+...
T Consensus 462 ~g~lwi-gt~~-Gl~~~~~~~~~~~~~~~~-~~~----------------~~~~~~~i~~i~~d~~g~lWigt~------ 516 (795)
T 4a2l_A 462 EGNLWL-GTLS-ALVRFNPEQRSFTTIEKE-KDG----------------TPVVSKQITTLFRDSHKRLWIGGE------ 516 (795)
T ss_dssp SSCEEE-EESS-CEEEEETTTTEEEECCBC-TTC----------------CBCCCCCEEEEEECTTCCEEEEES------
T ss_pred CCCEEE-EecC-ceeEEeCCCCeEEEcccc-ccc----------------cccCCceEEEEEECCCCCEEEEeC------
Confidence 888655 4454 488899877654332110 000 001124578889999998666543
Q ss_pred CCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCcee
Q psy15549 325 DSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPF 404 (621)
Q Consensus 325 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 404 (621)
+.+..++...... . ..............+.++... .++.+..++.. .|..||..+++..
T Consensus 517 -~Gl~~~~~~~~~~-~-~~~~~~~~~l~~~~i~~i~~d-----------------~~g~lWigT~~-Gl~~~d~~~~~~~ 575 (795)
T 4a2l_A 517 -EGLSVFKQEGLDI-Q-KASILPVSNVTKLFTNCIYEA-----------------SNGIIWVGTRE-GFYCFNEKDKQIK 575 (795)
T ss_dssp -SCEEEEEEETTEE-E-ECCCSCSCGGGGSCEEEEEEC-----------------TTSCEEEEESS-CEEEEETTTTEEE
T ss_pred -CceEEEeCCCCeE-E-EecCCCCCCCCCCeeEEEEEC-----------------CCCCEEEEeCC-CceeECCCCCcEE
Confidence 2344444321100 0 000000000011122222222 22445555554 6888998776433
Q ss_pred EEEecc---cccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcC
Q psy15549 405 AFIANI---HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 405 ~~~~~~---h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~ 446 (621)
. +... ....|.++...++|.+.+++ . +-|..|+..++.+
T Consensus 576 ~-~~~~~gl~~~~i~~i~~d~~g~lWi~t-~-~Gl~~~~~~~~~~ 617 (795)
T 4a2l_A 576 R-YNTTNGLPNNVVYGILEDSFGRLWLST-N-RGISCFNPETEKF 617 (795)
T ss_dssp E-ECGGGTCSCSCEEEEEECTTSCEEEEE-T-TEEEEEETTTTEE
T ss_pred E-eCCCCCCchhheEEEEECCCCCEEEEc-C-CceEEEcCCCCcE
Confidence 2 2221 23468999999999866655 3 4577788776543
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.67 E-value=2.2e-05 Score=83.97 Aligned_cols=52 Identities=8% Similarity=0.096 Sum_probs=35.8
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEEe
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIASS 431 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~s 431 (621)
.++.+++++.|+.++.||..+++.+..+..+..-.-.-+.+..+|+ +++.++
T Consensus 468 ~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 4578888889999999999999999887543221112344456777 555554
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.65 E-value=1.2e-06 Score=93.82 Aligned_cols=363 Identities=12% Similarity=0.071 Sum_probs=180.4
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccc-cCcE-EEEEEccCCCEEEEEc-CCceEEEE
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRH-QKAV-NVVRFSPNGELLASGD-DVGKEIWY 108 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h-~~~V-~~l~~spdg~~las~~-d~~v~iw~ 108 (621)
.|++++.++.|.-+|..+.+. +|.......... .... ...+ ..+++ .+..|+.++ ++.+..+|
T Consensus 68 ~vyv~~~~~~v~AlD~~tG~~-----~W~~~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD 133 (668)
T 1kv9_A 68 VIYTSMSWSRVIAVDAASGKE-----LWRYDPEVAKVK-------ARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALD 133 (668)
T ss_dssp EEEEEEGGGEEEEEETTTCCE-----EEEECCCCCGGG-------GGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEE
T ss_pred EEEEECCCCeEEEEECCCChh-----ceEECCCCCccc-------cccccccCCccceEE--ECCEEEEEcCCCEEEEEE
Confidence 677777788888777766655 777654322111 0000 0000 11112 133444444 77777777
Q ss_pred eccCccccccceeccccccc----CCCeEE-EEECCCCCEEEEEeC------CCcEEEEEccCCCCCCCCCCCC--cccc
Q psy15549 109 LTERESGIANVEFASDLSRH----QKAVNV-VRFSPNGELLASGDD------ESTIIVWKQKTDQDLPEFPSSN--LDEE 175 (621)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~h----~~~V~~-i~~sp~g~~l~s~s~------dg~i~vwd~~~~~~~~~~~~~~--~~~~ 175 (621)
..++. .+...... ...+.+ ... .++ .++.+.. +|.|..+|..+++.+-.+.... ....
T Consensus 134 ~~tG~-------~~W~~~~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~ 204 (668)
T 1kv9_A 134 AKTGK-------AIWSQQTTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALP 204 (668)
T ss_dssp TTTCC-------EEEEEECSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSC
T ss_pred CCCCC-------EeeeeccCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcc
Confidence 76653 11111110 000100 011 133 4555432 5899999999998764432100 0000
Q ss_pred c------ccccceeeee--eecCCCCCeEEEEECCCCCEEEEEeCCC-------------------eEEEEECCCCcEEE
Q psy15549 176 N------VNKEHWIVTK--ILRGHLEDVYDISWSPTSTHLISGSVDN-------------------TAIMWDVHKGKNLG 228 (621)
Q Consensus 176 ~------~~~~~~~~~~--~~~~~~~~v~~i~~spd~~~l~s~~~dg-------------------~i~vwd~~~~~~~~ 228 (621)
. .....|.-.. ...++......+++.|+..+++.++.++ .|..+|..+|+.+.
T Consensus 205 ~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W 284 (668)
T 1kv9_A 205 YEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAW 284 (668)
T ss_dssp CSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEE
T ss_pred ccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceee
Confidence 0 0000000000 0001222233578888888888887765 49999999999987
Q ss_pred Eecc--CC-------cceEEEEEcCCCC---EEEEEeCCCcEEEEEccCceeeeecccCCCCC------CCccccccccc
Q psy15549 229 ILTE--HK-------KFVQGVAWDPKNQ---YVATLSSDRSLRTYSIQSKKVISRACRSKLPV------DSSHELFDKVV 290 (621)
Q Consensus 229 ~~~~--~~-------~~v~~l~~sp~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 290 (621)
.+.. |. .+.....+..+|+ .++.++.+|.+.++|..+|+.+........+- ...........
T Consensus 285 ~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~ 364 (668)
T 1kv9_A 285 HYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGV 364 (668)
T ss_dssp EEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTT
T ss_pred EeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccc
Confidence 7753 22 2222223334665 68889999999999999999886544322110 00000000000
Q ss_pred c-------ccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccc
Q psy15549 291 P-------LFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCP 363 (621)
Q Consensus 291 ~-------~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (621)
. .+........-..++++|+...+++... +..... ... ... ..+ . ... .+...
T Consensus 365 ~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~-----~~~~~~-~~~----~~~-~~~-----~-~~~--~~g~~- 424 (668)
T 1kv9_A 365 RYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQ-----EVPGVY-RNE----GKD-FVT-----R-KAF--NTAAG- 424 (668)
T ss_dssp TCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEE-----ECCEEE-CCC----GGG-CCC-----C-SSC--CCSSC-
T ss_pred cccCCeeEECCCCccccCCCcceECCCCCEEEEecc-----ccceEe-eee----ccc-ccc-----c-ccc--ccCcc-
Confidence 0 0000000001134678888777766441 100000 000 000 000 0 000 00000
Q ss_pred eeeecCCCCCCCCccCCCcEEE-EEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 364 VLFELKPSDDKPLFKLPYRIVI-AVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
......+ ....+|.|+-||+.+++.+-.... ...+....+...|.++++++.||.|++||..
T Consensus 425 ---------------~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 425 ---------------FADATDVPAAVVSGALLAWDPVKQKAAWKVPY--PTHWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp ---------------GGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred ---------------ccccCCCCCCCccceEEEEeCCCCcEEEEccC--CCCCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 0000001 112458899999999998777643 2334444455578889999999999999999
Q ss_pred CCcCCcccCCCC
Q psy15549 443 DNEIGIPYVPPS 454 (621)
Q Consensus 443 ~~~~~~~~~~~~ 454 (621)
+|+.+..+..+.
T Consensus 488 tG~~l~~~~~~~ 499 (668)
T 1kv9_A 488 KGEALWQFEAQS 499 (668)
T ss_dssp TCCEEEEEECSS
T ss_pred cChhheEecCCC
Confidence 999887776654
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.6e-06 Score=78.78 Aligned_cols=114 Identities=12% Similarity=0.151 Sum_probs=78.5
Q ss_pred eEEEEECCCCCEEEEEeCCC--cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCe--EEEEECCCCCEE
Q psy15549 132 VNVVRFSPNGELLASGDDES--TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDV--YDISWSPTSTHL 207 (621)
Q Consensus 132 V~~i~~sp~g~~l~s~s~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~i~~spd~~~l 207 (621)
...+.|+ ++.++.+.+.+| .|+++|+.+++.+.. ..-. ... ..+++ ++..|
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~---------------------~~l~-~~~FgeGit~--~g~~l 99 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQ---------------------IELG-KRYFGEGISD--WKDKI 99 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEE---------------------EECC-TTCCEEEEEE--ETTEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEE---------------------EecC-CccceeEEEE--eCCEE
Confidence 4788898 677777777766 899999999986422 2211 222 23444 34455
Q ss_pred EEEe-CCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 208 ISGS-VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 208 ~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
.... .++.+.+||..+.+.+.++..... -..+ .++++.|+....++.|.++|..+.+.+..+.
T Consensus 100 y~ltw~~~~v~v~D~~t~~~~~ti~~~~e-G~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 100 VGLTWKNGLGFVWNIRNLRQVRSFNYDGE-GWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp EEEESSSSEEEEEETTTCCEEEEEECSSC-CCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEE
T ss_pred EEEEeeCCEEEEEECccCcEEEEEECCCC-ceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEE
Confidence 5544 588999999999999998864332 2233 4567777766667889999999988776653
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.8e-06 Score=79.54 Aligned_cols=198 Identities=12% Similarity=0.039 Sum_probs=121.9
Q ss_pred eEEEeccccccCCcceEEEEec--CCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGG--ADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~--~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
...++|+||+. ++++.+ .++.|+ +.|+.+++.... + .+..+. ....+++. +
T Consensus 23 ~~Gl~~~~dg~-----Lyvstg~~~~s~v~--------------~iD~~tg~v~~~-i----~l~~~~-fgeGi~~~--g 75 (266)
T 2iwa_A 23 TQGLVYAENDT-----LFESTGLYGRSSVR--------------QVALQTGKVENI-H----KMDDSY-FGEGLTLL--N 75 (266)
T ss_dssp EEEEEECSTTE-----EEEEECSTTTCEEE--------------EEETTTCCEEEE-E----ECCTTC-CEEEEEEE--T
T ss_pred cccEEEeCCCe-----EEEECCCCCCCEEE--------------EEECCCCCEEEE-E----ecCCCc-ceEEEEEe--C
Confidence 57999999875 555443 367899 666655543221 0 011111 11234444 5
Q ss_pred CEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 94 ELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 94 ~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
..|..+. ++.+.++|..+. +.+..+...... ...+++||+.|+++..++.|.++|..+.+....++.
T Consensus 76 ~~lyv~t~~~~~v~viD~~t~-------~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V-- 144 (266)
T 2iwa_A 76 EKLYQVVWLKNIGFIYDRRTL-------SNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV-- 144 (266)
T ss_dssp TEEEEEETTCSEEEEEETTTT-------EEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC--
T ss_pred CEEEEEEecCCEEEEEECCCC-------cEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE--
Confidence 5666555 778899998765 444444322111 133555788777777788999999988775432210
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC-------------CcceE
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH-------------KKFVQ 238 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-------------~~~v~ 238 (621)
..-...-..++.+.|. ++...+....++.|.+.|..+++.+..+... .....
T Consensus 145 --------------g~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~n 209 (266)
T 2iwa_A 145 --------------KYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLN 209 (266)
T ss_dssp --------------EETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEE
T ss_pred --------------CCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceE
Confidence 0000111246778888 7755555556789999999999998887532 12457
Q ss_pred EEEEcCCCCEEEE-EeCCCcEEEEEccCc
Q psy15549 239 GVAWDPKNQYVAT-LSSDRSLRTYSIQSK 266 (621)
Q Consensus 239 ~l~~sp~~~~l~s-~~~dg~i~iwd~~~~ 266 (621)
.++|+|+++.|++ +...+.|...++...
T Consensus 210 GIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 210 GIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 9999999876554 546788888887653
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.60 E-value=5e-06 Score=75.58 Aligned_cols=117 Identities=9% Similarity=-0.050 Sum_probs=81.2
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE
Q psy15549 131 AVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG 210 (621)
Q Consensus 131 ~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~ 210 (621)
....+.|+ ++.++++.+.+|.|+++|+.+++.+.. .+.. ...-..+++.. +++.+..
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~--------------------~l~~-~~FgeGit~~g-~~Ly~lt 112 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWM--------------------ERLG-NIFAEGLASDG-ERLYQLT 112 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEE--------------------EECT-TCCEEEEEECS-SCEEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeE--------------------ECCC-CcceeEEEEeC-CEEEEEE
Confidence 34688887 456777888889999999999986521 1221 11123355543 2344445
Q ss_pred eCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 211 SVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 211 ~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
-.++.+.+||..+++.+.++.... .-..++ ++++.|+.+..++.|.++|..+.+.+..+.
T Consensus 113 w~~~~v~V~D~~Tl~~~~ti~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 113 WTEGLLFTWSGMPPQRERTTRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp SSSCEEEEEETTTTEEEEEEECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred ccCCEEEEEECCcCcEEEEEeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 568999999999999999886432 223444 568888877778899999999988777654
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.57 E-value=0.00048 Score=75.53 Aligned_cols=299 Identities=8% Similarity=-0.019 Sum_probs=161.3
Q ss_pred CcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccc-----cccCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy15549 82 KAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDL-----SRHQKAVNVVRFSPNGELLASGDDESTIIVW 156 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~-----~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vw 156 (621)
..|.++...++|.+.+.... ++.+|+...... ...... .-....|.++...++|. |..|+..+-|.++
T Consensus 211 ~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~-----~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~ 283 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGTSK-GLALFNANTETF-----TNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMIL 283 (781)
T ss_dssp SSEEEEEECTTCCEEEEETT-EEEEEETTTTEE-----EC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEE
T ss_pred CceeEEEEcCCCCEEEEeCC-cHheECCCCCcE-----EEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEE
Confidence 56999999999887776555 898998765421 111100 11235699999888876 4455554558889
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec-----
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT----- 231 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~----- 231 (621)
+..+....... ...+..... ......-....|.++...++|. |-.|+.++-|..|+..+........
T Consensus 284 ~~~~~~~~~~~-~~~f~~~~~------~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~ 355 (781)
T 3v9f_A 284 DLQQNQFLLPE-QIRFEFIRE------GDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQM 355 (781)
T ss_dssp ETTCC----------CEEECB------CSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CC
T ss_pred CCCCCeeeeee-ccccccccC------CCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCcccc
Confidence 88765432100 000000000 0000012346799999998886 5567767778899887654322210
Q ss_pred ----cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 232 ----EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 232 ----~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
.....|.++...++|.+. .|+.++-|..|+..++.... +.. . .......|.++..
T Consensus 356 ~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~-~~~-~------------------~~~~~~~v~~i~~ 414 (781)
T 3v9f_A 356 NESSLSNKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIY-NKE-N------------------RELLSNSVLCSLK 414 (781)
T ss_dssp CSSCCSSSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEEC-C------------------------CCCSBEEEEEE
T ss_pred ccCCCCCcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEE-ccC-C------------------CCCCCcceEEEEE
Confidence 123568999988887754 56666668899986654321 110 0 0011245788888
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
.++|.+.+... ++.+..++........ .... ......+.++... .++.+.++
T Consensus 415 d~~g~lWigt~------~~Gl~~~~~~~~~~~~-~~~~----~~~~~~v~~i~~d-----------------~~g~lwig 466 (781)
T 3v9f_A 415 DSEGNLWFGTY------LGNISYYNTRLKKFQI-IELE----KNELLDVRVFYED-----------------KNKKIWIG 466 (781)
T ss_dssp CTTSCEEEEET------TEEEEEECSSSCEEEE-CCST----TTCCCCEEEEEEC-----------------TTSEEEEE
T ss_pred CCCCCEEEEec------cCCEEEEcCCCCcEEE-eccC----CCCCCeEEEEEEC-----------------CCCCEEEE
Confidence 88887666432 2233333321100000 0000 0011122222211 23456666
Q ss_pred EcCCcEEEEeCCCCceeEEEecc----cccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcC
Q psy15549 388 ATENNILLYDTQHASPFAFIANI----HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEI 446 (621)
Q Consensus 388 ~~dg~i~iwd~~~~~~~~~~~~~----h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~ 446 (621)
+. +.|..||..+++........ ....|.+++..++|.+.+.. .++-|..|+..++..
T Consensus 467 t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~~~Gl~~~~~~~~~~ 527 (781)
T 3v9f_A 467 TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT-FGGGVGIYTPDMQLV 527 (781)
T ss_dssp ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE-SSSCEEEECTTCCEE
T ss_pred EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE-cCCCEEEEeCCCCeE
Confidence 66 67999998877654433111 13579999999999865544 433477787765543
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.55 E-value=0.00017 Score=69.03 Aligned_cols=153 Identities=12% Similarity=0.100 Sum_probs=88.7
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC--cEEEEEc
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES--TIIVWKQ 158 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg--~i~vwd~ 158 (621)
.....++|+++|+++++.. .+.|..|+..... ... + .....+..+++.++|+++++..... .|..++.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~------~~~--~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ------QIH--A-TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE------EEE--E-ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce------EEE--E-eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcC
Confidence 4577899999999777764 6667777654321 111 1 1234688999999999666554332 4666666
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EEEEec------
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK-NLGILT------ 231 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~-~~~~~~------ 231 (621)
.+++.. . .... ........++..+++..+++-..++.|+++|..++. .+....
T Consensus 103 ~~g~~~-~------------------~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~ 162 (306)
T 2p4o_A 103 SDGTVE-T------------------LLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARS 162 (306)
T ss_dssp TTSCEE-E------------------EEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCS
T ss_pred CCCeEE-E------------------EEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccc
Confidence 555421 0 0111 112223455555555545554458899999987653 121110
Q ss_pred ---cCCcceEEEEEcCCCCEEEEEe-CCCcEEEEEccC
Q psy15549 232 ---EHKKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQS 265 (621)
Q Consensus 232 ---~~~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~ 265 (621)
........+ +|++++|+.+. ..+.|..|++..
T Consensus 163 ~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 163 NSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp STTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred cccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 111234455 78888776655 467899999864
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=6.3e-05 Score=78.67 Aligned_cols=51 Identities=8% Similarity=-0.035 Sum_probs=35.8
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEE
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIAS 430 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~ 430 (621)
.++.++.++.|+.++.||..+++.+..+..+......-+.+..+|+ |+++.
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIY 534 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEE
Confidence 4577888889999999999999998887543322223355667886 44443
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=4.6e-05 Score=79.76 Aligned_cols=49 Identities=14% Similarity=0.042 Sum_probs=33.8
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEE
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLI 428 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~ 428 (621)
.++.+++++.|+.|+.||..+++.+..+..+....-.-+.+..+|+.++
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 3467888889999999999999999888654322222234556776444
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=1.2e-05 Score=77.82 Aligned_cols=220 Identities=9% Similarity=0.026 Sum_probs=121.8
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccc-c-ceeeccccccccCcEEEEEEcc-
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGI-A-NVEFASDLSRHQKAVNVVRFSP- 91 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~-~-~~~~~~~~~~h~~~V~~l~~sp- 91 (621)
.-.++++++++. +++++..++.|..|+....... .|......... . .-............+..+++.+
T Consensus 20 ~p~~i~~d~~g~-----~l~v~~~~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~ 90 (322)
T 2fp8_A 20 APNSFTFDSTNK-----GFYTSVQDGRVIKYEGPNSGFV----DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ 90 (322)
T ss_dssp CCCCEECCTTCS-----SEEEECTTSEEEEECCTTTCEE----EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT
T ss_pred CceEEEEcCCCC-----EEEEEcCCCeEEEECCCCCceE----EEecccccccccccccccchhccccCCCCceEEEcCC
Confidence 467889999986 7888888999983433221100 11110000000 0 0000000011224578999998
Q ss_pred CCCEEEEEcCCceEEEEeccCccccccceecc-cccc-cCCCeEEEEECC-CCCEEEEEeC-----------------CC
Q psy15549 92 NGELLASGDDVGKEIWYLTERESGIANVEFAS-DLSR-HQKAVNVVRFSP-NGELLASGDD-----------------ES 151 (621)
Q Consensus 92 dg~~las~~d~~v~iw~~~~~~~~~~~~~~~~-~~~~-h~~~V~~i~~sp-~g~~l~s~s~-----------------dg 151 (621)
+|+++++...+++..++...+.. ..+. ...+ .......+++.+ +|++.++-.. ++
T Consensus 91 ~g~l~v~d~~~~i~~~d~~~g~~-----~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g 165 (322)
T 2fp8_A 91 NNQLYIVDCYYHLSVVGSEGGHA-----TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTG 165 (322)
T ss_dssp TTEEEEEETTTEEEEECTTCEEC-----EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCE
T ss_pred CCcEEEEECCCCEEEEeCCCCEE-----EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCc
Confidence 67666665566677776543211 1111 1111 123467899999 8987666432 35
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCc--EEE
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVHKGK--NLG 228 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~~~~--~~~ 228 (621)
.|..||..++.. ..+.........++|+|++++|+.+ ...+.|.+|++.... ...
T Consensus 166 ~v~~~d~~~~~~----------------------~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~ 223 (322)
T 2fp8_A 166 RLIKYDPSTKET----------------------TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAE 223 (322)
T ss_dssp EEEEEETTTTEE----------------------EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEE
T ss_pred eEEEEeCCCCEE----------------------EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccc
Confidence 677777655432 1111111234679999999876665 456899999987421 111
Q ss_pred EeccCCcceEEEEEcCCCCEEEEEeC----------CCcEEEEEccCceeeeec
Q psy15549 229 ILTEHKKFVQGVAWDPKNQYVATLSS----------DRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 229 ~~~~~~~~v~~l~~sp~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~ 272 (621)
.+....+ ...++++++|++.++... .+.|..+|.. ++.+..+
T Consensus 224 ~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~ 275 (322)
T 2fp8_A 224 VLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVI 275 (322)
T ss_dssp EEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEE
T ss_pred eEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEE
Confidence 2211223 678999999987665544 4568888863 5555544
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=2e-05 Score=76.23 Aligned_cols=255 Identities=13% Similarity=0.072 Sum_probs=134.8
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC-ccc-ccccccceeeeeeecCCCCCeEEEEECC-CCCEE
Q psy15549 131 AVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN-LDE-ENVNKEHWIVTKILRGHLEDVYDISWSP-TSTHL 207 (621)
Q Consensus 131 ~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~v~~i~~sp-d~~~l 207 (621)
...+++|.+++++++++..++.|..|+..++... .+.... ... ...... . ..........+..+++.+ ++ .|
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~-~--~~~~~~~~~~p~gi~~~~~~g-~l 94 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENS-T--DAEKRPLCGRTYDISYNLQNN-QL 94 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTC-C--CGGGHHHHCCEEEEEEETTTT-EE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccc-c--chhccccCCCCceEEEcCCCC-cE
Confidence 3456889999987888888899999987654321 000000 000 000000 0 000000123578999998 55 45
Q ss_pred EEEeCCCeEEEEECCCCcEEEEecc-----CCcceEEEEEcC-CCCEEEEEeC-----------------CCcEEEEEcc
Q psy15549 208 ISGSVDNTAIMWDVHKGKNLGILTE-----HKKFVQGVAWDP-KNQYVATLSS-----------------DRSLRTYSIQ 264 (621)
Q Consensus 208 ~s~~~dg~i~vwd~~~~~~~~~~~~-----~~~~v~~l~~sp-~~~~l~s~~~-----------------dg~i~iwd~~ 264 (621)
+.+...+.|..+|..++.. ..+.. .......+++.+ +|++.++-.. ++.|..||..
T Consensus 95 ~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp EEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 5565556688888765532 22211 112467899999 8987665432 3668888876
Q ss_pred CceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCC
Q psy15549 265 SKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNK 344 (621)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~ 344 (621)
+++....... ......++|+|+|++|+++.. ..+.+..+++.... . .
T Consensus 174 ~~~~~~~~~~------------------------~~~p~gia~~~dg~~lyv~d~----~~~~I~~~~~~~~~----~-~ 220 (322)
T 2fp8_A 174 TKETTLLLKE------------------------LHVPGGAEVSADSSFVLVAEF----LSHQIVKYWLEGPK----K-G 220 (322)
T ss_dssp TTEEEEEEEE------------------------ESCCCEEEECTTSSEEEEEEG----GGTEEEEEESSSTT----T-T
T ss_pred CCEEEEeccC------------------------CccCcceEECCCCCEEEEEeC----CCCeEEEEECCCCc----C-C
Confidence 6653221110 011257999999997766531 33445544433100 0 0
Q ss_pred CceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc----------CCcEEEEeCCCCceeEEEeccc---
Q psy15549 345 PAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT----------ENNILLYDTQHASPFAFIANIH--- 411 (621)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~h--- 411 (621)
....+. ...- |.-. .+..++..+++... .+.|..+|.. ++.+..+....
T Consensus 221 ~~~~~~-------~~~g-P~gi---------~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~ 282 (322)
T 2fp8_A 221 TAEVLV-------KIPN-PGNI---------KRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFA 282 (322)
T ss_dssp CEEEEE-------ECSS-EEEE---------EECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTT
T ss_pred ccceEE-------eCCC-CCCe---------EECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCc
Confidence 000000 0000 2111 22235555555544 4678888874 66666654322
Q ss_pred ccceEEEEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 412 YTKLTDITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 412 ~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
...++++++ .+|+++++....+.|..+++..
T Consensus 283 ~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 283 GEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred cccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 245777777 4666666666788899998763
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.5e-05 Score=71.89 Aligned_cols=118 Identities=8% Similarity=-0.012 Sum_probs=78.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCC--cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEE
Q psy15549 130 KAVNVVRFSPNGELLASGDDES--TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL 207 (621)
Q Consensus 130 ~~V~~i~~sp~g~~l~s~s~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l 207 (621)
.....+.|++ +.++.+.+.+| .|+++|+.+++.+..+ .+..+ ..-..+++. ++.|
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~-------------------~l~~~-~fgeGi~~~--~~~l 77 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRA-------------------EVPPP-YFGAGIVAW--RDRL 77 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEE-------------------ECCTT-CCEEEEEEE--TTEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEE-------------------eCCCC-cceeEEEEe--CCEE
Confidence 3466899986 56666666654 8999999999864221 11111 111233443 3444
Q ss_pred E-EEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 208 I-SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 208 ~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
. ..-.++.+.+||..+.+.+.++..... -..++ +++..|+.+..++.|.++|..+.+.+..+.
T Consensus 78 y~ltw~~~~v~v~D~~tl~~~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 78 IQLTWRNHEGFVYDLATLTPRARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEEeeCCEEEEEECCcCcEEEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 4 445689999999999999999865332 23444 567777766678899999999988776653
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.47 E-value=0.00086 Score=64.73 Aligned_cols=194 Identities=10% Similarity=0.128 Sum_probs=104.2
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecc-ccccccCcEEEEEEcc
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFAS-DLSRHQKAVNVVRFSP 91 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~-~~~~h~~~V~~l~~sp 91 (621)
...+.+|.|.+++. .+++|. .|.| ++..+.++. ++... ........+.+|.|.+
T Consensus 35 ~~~~~~v~~~~~~~-----~~~~G~-~g~i---------------~~s~DgG~t----W~~~~~~~~~~~~~~~~i~~~~ 89 (327)
T 2xbg_A 35 TATILDMSFIDRHH-----GWLVGV-NATL---------------METRDGGQT----WEPRTLVLDHSDYRFNSVSFQG 89 (327)
T ss_dssp SSCEEEEEESSSSC-----EEEEET-TTEE---------------EEESSTTSS----CEECCCCCSCCCCEEEEEEEET
T ss_pred CCcEEEEEECCCCc-----EEEEcC-CCeE---------------EEeCCCCCC----CeECCCCCCCCCccEEEEEecC
Confidence 45799999987776 667554 5544 222222221 11111 0112244688999986
Q ss_pred CCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 92 NGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 92 dg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
+..++++..+ .|+....++.. +..+.....+...+..+.+.+++..++.+ .+|.|.. ..+.++
T Consensus 90 -~~~~~~g~~g--~i~~S~DgG~t---W~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~--------- 152 (327)
T 2xbg_A 90 -NEGWIVGEPP--IMLHTTDGGQS---WSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGK--------- 152 (327)
T ss_dssp -TEEEEEEETT--EEEEESSTTSS---CEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTS---------
T ss_pred -CeEEEEECCC--eEEEECCCCCC---ceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCC---------
Confidence 5555555454 34444443321 12222111233457778877777666555 4554422 112222
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEEC--CCCcEEEEeccCCcceEEEEEcCCCCEE
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDV--HKGKNLGILTEHKKFVQGVAWDPKNQYV 249 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~--~~~~~~~~~~~~~~~v~~l~~sp~~~~l 249 (621)
.|.. ........+..+.+.+++.+++++...+..+-+|- .+.+.+. ......+..+.+.+++..+
T Consensus 153 ---------tW~~--~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~ 219 (327)
T 2xbg_A 153 ---------NWQA--LVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW 219 (327)
T ss_dssp ---------SEEE--EECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE
T ss_pred ---------CCEE--eecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE
Confidence 1322 22345567899999999888776654433333442 2233332 2345678889999988765
Q ss_pred EEEeCCCcEEEEE
Q psy15549 250 ATLSSDRSLRTYS 262 (621)
Q Consensus 250 ~s~~~dg~i~iwd 262 (621)
+ ++.+|.+++.+
T Consensus 220 ~-~~~~G~~~~s~ 231 (327)
T 2xbg_A 220 M-IVNGGKIAFSD 231 (327)
T ss_dssp E-EETTTEEEEEE
T ss_pred E-EeCCceEEEec
Confidence 4 55678777664
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.45 E-value=2.1e-05 Score=85.57 Aligned_cols=157 Identities=15% Similarity=0.082 Sum_probs=92.9
Q ss_pred cccC-cEEEEEEc-cCCCEEEEEcC--C----ceEEEEeccC-ccccccceecccccccCCCeEEEEECCCCCEEEEEeC
Q psy15549 79 RHQK-AVNVVRFS-PNGELLASGDD--V----GKEIWYLTER-ESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD 149 (621)
Q Consensus 79 ~h~~-~V~~l~~s-pdg~~las~~d--~----~v~iw~~~~~-~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~ 149 (621)
+|.. .+...+|| |||++||.+.+ + .|.++++.++ .. ....+.. ....++|+|||+.|+....
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~------l~~~~~~---~~~~~~WspDg~~l~y~~~ 240 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT------IADKVSG---TNGEIVWGPDHTSLFYVTK 240 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC------CCCCEEE---ECSCCEECSSTTEEEEEEE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe------CCccccC---ceeeEEEecCCCEEEEEEE
Confidence 4443 68889999 99999997652 1 2778887765 31 0111111 1346889999998887766
Q ss_pred C-----CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeec-CCCCCeEEEEECCCCCEEEEEeC---CCeEEEEE
Q psy15549 150 E-----STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR-GHLEDVYDISWSPTSTHLISGSV---DNTAIMWD 220 (621)
Q Consensus 150 d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~~spd~~~l~s~~~---dg~i~vwd 220 (621)
+ ..|.++++.++.... ...+. ........+.|+|||++|+..+. ...|+++|
T Consensus 241 d~~~~~~~v~~~~lgt~~~~~-------------------~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d 301 (751)
T 2xe4_A 241 DETLRENKVWRHVMGKLQSED-------------------VCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLD 301 (751)
T ss_dssp CTTCCEEEEEEEETTSCGGGC-------------------EEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEE
T ss_pred CCCCCCCEEEEEECCCCchhc-------------------EEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEE
Confidence 5 257777876653210 01111 22334678899999998887653 35788899
Q ss_pred CCCCc-EE--EEec-cCCcceEEEEEcCCCCEEEEEeC-C--C--cEEEEEcc
Q psy15549 221 VHKGK-NL--GILT-EHKKFVQGVAWDPKNQYVATLSS-D--R--SLRTYSIQ 264 (621)
Q Consensus 221 ~~~~~-~~--~~~~-~~~~~v~~l~~sp~~~~l~s~~~-d--g--~i~iwd~~ 264 (621)
+.++. .. ..+. ........+.|+. |..|+..+. + + .|..+++.
T Consensus 302 ~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 302 LRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp SSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETT
T ss_pred CCCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCC
Confidence 98752 22 3333 3334445555544 555554443 3 2 45555554
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.45 E-value=0.00082 Score=73.68 Aligned_cols=300 Identities=10% Similarity=0.023 Sum_probs=163.1
Q ss_pred CcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceeccc-----ccccCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy15549 82 KAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASD-----LSRHQKAVNVVRFSPNGELLASGDDESTIIVW 156 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~-----~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vw 156 (621)
..|.++...++|.+.+...++++..|+...... ..... ..-....|.++...++|.+.+. +.+ -|.+|
T Consensus 163 ~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~-----~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwig-t~~-Gl~~~ 235 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYIGHVEGGLSILSLNDKSV-----KHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIG-TSK-GLALF 235 (781)
T ss_dssp CCEEEEEEEETTEEEEEETTTEEEEEETTTTEE-----EEECC--------CCSSEEEEEECTTCCEEEE-ETT-EEEEE
T ss_pred cceEEEEECCCCCEEEEecCCCeEEEcCCCCce-----EeeecCCCCcccCCCCceeEEEEcCCCCEEEE-eCC-cHheE
Confidence 468888888888877765566888888665411 11100 0012356889998888876554 444 58889
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec-----
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT----- 231 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~----- 231 (621)
|..++.... +.... ..........|.++...++|. |..|+..+-|.++|..++.......
T Consensus 236 d~~~~~~~~-~~~~~-------------~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~ 300 (781)
T 3v9f_A 236 NANTETFTN-FHNNP-------------GNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEF 300 (781)
T ss_dssp ETTTTEEEC-------------------------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEE
T ss_pred CCCCCcEEE-EEcCC-------------CccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeecccccc
Confidence 976654211 10000 000011245699999988875 5556665568899987665322111
Q ss_pred ---------cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccce
Q psy15549 232 ---------EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFF 302 (621)
Q Consensus 232 ---------~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 302 (621)
.....|.++...++|.+ ..|+.++-|..|+..+............. . ........|
T Consensus 301 ~~~~~~~~~l~~~~v~~i~~D~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~--~------------~~~l~~~~v 365 (781)
T 3v9f_A 301 IREGDNNYSLSNASARYIFQDSFNNI-WIGTWGGGINFISNAPPTFHTWSYSPTQM--N------------ESSLSNKVV 365 (781)
T ss_dssp ECBCSSTTSBSSSCEEEEEECSSCCE-EEEEBSSCEEEECSSCCSCEEEC----CC--C------------SSCCSSSCE
T ss_pred ccCCCCCCCCCCCeEEEEEEeCCCCE-EEEecCCeEEEeCCCCCcceeeccCcccc--c------------cCCCCCcce
Confidence 12456899999988874 45776777888887654432211000000 0 000112357
Q ss_pred eeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCc
Q psy15549 303 RRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYR 382 (621)
Q Consensus 303 ~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (621)
.++...++|.+.+.. .++.+..++........ ...+ . ......+.++... .++
T Consensus 366 ~~i~~d~~g~lWigt------~~~Gl~~~~~~~~~~~~-~~~~-~--~~~~~~v~~i~~d-----------------~~g 418 (781)
T 3v9f_A 366 SSVCDDGQGKLWIGT------DGGGINVFENGKRVAIY-NKEN-R--ELLSNSVLCSLKD-----------------SEG 418 (781)
T ss_dssp EEEEECTTSCEEEEE------BSSCEEEEETTEEEEEC-C--------CCCSBEEEEEEC-----------------TTS
T ss_pred EEEEEcCCCCEEEEe------CCCcEEEEECCCCeEEE-ccCC-C--CCCCcceEEEEEC-----------------CCC
Confidence 888888888766543 23344444432211000 0000 0 0111222332221 234
Q ss_pred EEEEEEcCCcEEEEeCCCCceeEEEe-cccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCC
Q psy15549 383 IVIAVATENNILLYDTQHASPFAFIA-NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIG 447 (621)
Q Consensus 383 ~l~~~~~dg~i~iwd~~~~~~~~~~~-~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~ 447 (621)
.|.+++.++.|..||..+++...... ......|.++...++|.+.+. +. +-|.+|+..+++..
T Consensus 419 ~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~ 482 (781)
T 3v9f_A 419 NLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVI 482 (781)
T ss_dssp CEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCC
T ss_pred CEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEE
Confidence 56667777789999988775332211 113467999999988875554 44 55888998876653
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.43 E-value=2.5e-05 Score=83.65 Aligned_cols=75 Identities=9% Similarity=0.126 Sum_probs=49.4
Q ss_pred CcEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CC-----CcE
Q psy15549 82 KAVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DE-----STI 153 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~d-----g~i 153 (621)
....++++..+|++++.|+ +..+.+||...... ..+..+..... -.+++..+++++++.|+ .+ ..+
T Consensus 243 ~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W-----~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~ 316 (656)
T 1k3i_A 243 MFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSW-----IPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNG 316 (656)
T ss_dssp CSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEE-----EECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCE
T ss_pred CccccccCCCCCCEEEeCCCCCCceEEecCcCCce-----eECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccc
Confidence 3344577889999999988 44689999876632 22222222211 23456667899999988 34 468
Q ss_pred EEEEccCCC
Q psy15549 154 IVWKQKTDQ 162 (621)
Q Consensus 154 ~vwd~~~~~ 162 (621)
.+||..+..
T Consensus 317 e~yd~~t~~ 325 (656)
T 1k3i_A 317 EVYSPSSKT 325 (656)
T ss_dssp EEEETTTTE
T ss_pred eEeCCCCCc
Confidence 899987654
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=5.5e-05 Score=79.12 Aligned_cols=217 Identities=10% Similarity=0.039 Sum_probs=117.0
Q ss_pred EEEECCCCCEEEEEeCC----------------CeEEEEECCCCcEEEEeccCCc---------ceEEEEEc-CCC---C
Q psy15549 197 DISWSPTSTHLISGSVD----------------NTAIMWDVHKGKNLGILTEHKK---------FVQGVAWD-PKN---Q 247 (621)
Q Consensus 197 ~i~~spd~~~l~s~~~d----------------g~i~vwd~~~~~~~~~~~~~~~---------~v~~l~~s-p~~---~ 247 (621)
.+++.++..+++.+..+ +.|..+|..+|+.+..++.... ...-+... .+| .
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~ 324 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARK 324 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEE
Confidence 35566677777777654 3899999999999877653211 11112222 567 4
Q ss_pred EEEEEeCCCcEEEEEccCceeeeecccCCCC-----C--CCccccccc---------cccccccCCcccceeeeeecCCC
Q psy15549 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLP-----V--DSSHELFDK---------VVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~--~~~~~~~~~---------~~~~~~~~~~~~~i~~~~~spdg 311 (621)
.++.++.+|.+.++|..+++.+......... + ..+...... ...++-...-...-..++++|+.
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 404 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKR 404 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCC
Confidence 6777889999999999999988765432200 0 000000000 00000000000112467889988
Q ss_pred CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcE-EEEE--E
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRI-VIAV--A 388 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~--~ 388 (621)
.++++.. .+.....+ .. . .....+. ..+ . ..+ +... +
T Consensus 405 ~~~yv~~-----~~~~~~~~-~~---~-------~~~~~g~-~~~-g----------------------~~~~~~~~p~~ 444 (599)
T 1w6s_A 405 ELFFMGI-----NHICMDWE-PF---M-------LPYKAGQ-FFV-G----------------------ATLNMYPGPKG 444 (599)
T ss_dssp TEEEEEE-----ECEEEEEE-EC---C-------CCCCTTS-CCC-C----------------------EEEEEEECTTS
T ss_pred CEEEEec-----cccceeee-cc---c-------ccccCCc-cee-c----------------------ccceeccCCcC
Confidence 8887765 11110000 00 0 0000000 000 0 000 0000 1
Q ss_pred ------cCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCC
Q psy15549 389 ------TENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSG 455 (621)
Q Consensus 389 ------~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~ 455 (621)
..|.|.-||+.+++.+-....+ .++..-.....|..++.++.||.++.||..+|+.+-.+..+..
T Consensus 445 ~~~~~~~~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g 515 (599)
T 1w6s_A 445 DRQNYEGLGQIKAYNAITGDYKWEKMER--FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG 515 (599)
T ss_dssp BTTTTBCCEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CcccCCCcCeEEEEECCCCCEEeEecCC--CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCC
Confidence 3578999999999887766432 2222211223566788899999999999999998877765543
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.40 E-value=8.2e-06 Score=74.19 Aligned_cols=188 Identities=10% Similarity=0.104 Sum_probs=114.8
Q ss_pred cCCCC--eEEEeccccccCCcceEEEEecCCc--eEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 11 HNRDP--VLSVDIQLKQEKDNCYRIVTGGADS--HVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 11 ~h~~~--v~~l~~spd~~~~~~~~l~tg~~dg--~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
.|... ...|.|+ ++. ++++.+.+| .|+ ++|+.+++.... +.- ......
T Consensus 38 phd~~~ftqGL~~~-~~~-----LyestG~~g~S~v~--------------~vD~~Tgkv~~~-------~~l-~~~~Fg 89 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGY-----FYESTGLNGRSSIR--------------KVDIESGKTLQQ-------IEL-GKRYFG 89 (262)
T ss_dssp ECCTTCEEEEEEEE-TTE-----EEEEEEETTEEEEE--------------EECTTTCCEEEE-------EEC-CTTCCE
T ss_pred cCCCCcccceEEEE-CCE-----EEEECCCCCCceEE--------------EEECCCCcEEEE-------Eec-CCccce
Confidence 45443 4788888 665 666666655 888 666655543222 110 122333
Q ss_pred EEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 87 VRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 87 l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
.-..+++..|.... ++.+.+||..+. +.+.++...... +.++ ++++.|+.+..++.|.++|..+.+.+
T Consensus 90 eGit~~g~~ly~ltw~~~~v~v~D~~t~-------~~~~ti~~~~eG-~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 90 EGISDWKDKIVGLTWKNGLGFVWNIRNL-------RQVRSFNYDGEG-WGLT--HNDQYLIMSDGTPVLRFLDPESLTPV 159 (262)
T ss_dssp EEEEEETTEEEEEESSSSEEEEEETTTC-------CEEEEEECSSCC-CCEE--ECSSCEEECCSSSEEEEECTTTCSEE
T ss_pred eEEEEeCCEEEEEEeeCCEEEEEECccC-------cEEEEEECCCCc-eEEe--cCCCEEEEECCCCeEEEEcCCCCeEE
Confidence 22333455555554 778899998876 444444332221 2333 56777777666788999999888754
Q ss_pred CCCCCCCcccccccccceeeeeeecCCC-CCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC----------
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHL-EDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH---------- 233 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---------- 233 (621)
..+. ....+.. ..++.+.|. +|...+..-.++.|.+.|..+++.+..+...
T Consensus 160 ~~I~-----------------V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~ 221 (262)
T 3nol_A 160 RTIT-----------------VTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLP 221 (262)
T ss_dssp EEEE-----------------CEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCC
T ss_pred EEEE-----------------eccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcccccccc
Confidence 3321 0011112 345567776 7765655556889999999999998877431
Q ss_pred --CcceEEEEEcCCCCEEEEEeC
Q psy15549 234 --KKFVQGVAWDPKNQYVATLSS 254 (621)
Q Consensus 234 --~~~v~~l~~sp~~~~l~s~~~ 254 (621)
......++|+|+++.|++.+.
T Consensus 222 ~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 222 SPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SSCCCEEEEEEETTTTEEEEEET
T ss_pred CcCCceEEEEEcCCCCEEEEECC
Confidence 134579999999888877765
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=3.2e-05 Score=80.95 Aligned_cols=220 Identities=13% Similarity=0.030 Sum_probs=115.7
Q ss_pred EEEECCCCCEEEEEeCC----------------CeEEEEECCCCcEEEEecc--CC--------cceEEEEEcCCCC---
Q psy15549 197 DISWSPTSTHLISGSVD----------------NTAIMWDVHKGKNLGILTE--HK--------KFVQGVAWDPKNQ--- 247 (621)
Q Consensus 197 ~i~~spd~~~l~s~~~d----------------g~i~vwd~~~~~~~~~~~~--~~--------~~v~~l~~sp~~~--- 247 (621)
.+++.++...++.++.+ +.|..+|..+|+.+..++. |. .++ -+...++|+
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~ 317 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTP 317 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEE
Confidence 35566666666666532 3699999999998877643 21 111 122234674
Q ss_pred EEEEEeCCCcEEEEEccCceeeeecccCC-CCC------CCccccccc-cc------cccccCC--cccceeeeeecCCC
Q psy15549 248 YVATLSSDRSLRTYSIQSKKVISRACRSK-LPV------DSSHELFDK-VV------PLFHDDT--MKSFFRRLTFSPDG 311 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~------~~~~~~~~~-~~------~~~~~~~--~~~~i~~~~~spdg 311 (621)
.++.++.+|.+.++|..+++.+....... ... ..+...... .. ....... ....-..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 57778889999999999999887654322 000 000000000 00 0000000 00011467888988
Q ss_pred CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCccc--ceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQY--YSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT 389 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (621)
.++++.+ .+....++..... ...+... ....+..+| . +. ....
T Consensus 398 g~~yv~~-----~~~~~~~~~~~~~-----------~~~g~~~~g~~~~~~~~~-------~---------~~---~~~~ 442 (571)
T 2ad6_A 398 RTLYAGL-----NHICMDWEPFMLP-----------YRAGQFFVGATLAMYPGP-------N---------GP---TKKE 442 (571)
T ss_dssp TEEEEEE-----ECEEEEEEECCCC-----------CCTTSCCCCEEEEEEECT-------T---------ST---TSCC
T ss_pred CEEEEEc-----hhccccccccccc-----------cccCCccccccceeccCc-------c---------cc---CCCC
Confidence 8887765 2211111110000 0000000 000000000 0 00 0013
Q ss_pred CCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCC
Q psy15549 390 ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 390 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
++.|+.||..+++.+-..... ..+....+...+..++.++.||.|+.||..+|+.+-.+....
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK--FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCeEEEEECCCCCEEEEecCC--CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 578999999999987776432 233333333346677889999999999999999887766543
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.39 E-value=0.00038 Score=67.87 Aligned_cols=153 Identities=10% Similarity=0.056 Sum_probs=92.7
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEE-eCCCcEEEEEccCC
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG-DDESTIIVWKQKTD 161 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~-s~dg~i~vwd~~~~ 161 (621)
...|.+..+ ..+|+.+....|+..++.... ... +......+..++|++....|+.+ ...+.|..+++...
T Consensus 35 ~~~C~~~~~-~~~ll~~~~~~I~~i~~~g~~-------~~~-~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~ 105 (349)
T 3v64_C 35 RRSCKALGP-EPVLLFANRIDIRQVLPHRSE-------YTL-LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS 105 (349)
T ss_dssp SSCEEESSS-CCEEEEECBSCEEEECTTSCC-------EEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCccccccc-CceeEeecccceEEEeCCCCe-------eEE-eecCCCceEEEEEeccccEEEEEeccCCceEEEecCCC
Confidence 345555555 456666666667666665431 111 11223457899999866555544 46678999988765
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEeccCCcceEEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL-ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 240 (621)
... ............+++.+.+..| ++-...+.|.+.++........+.........+
T Consensus 106 ~~~---------------------~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~i 164 (349)
T 3v64_C 106 NVE---------------------EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAI 164 (349)
T ss_dssp SCE---------------------EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEE
T ss_pred Cce---------------------EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceE
Confidence 421 1122222345778888755544 444556889999986554333343344567899
Q ss_pred EEcCCCCEEEEEeC-C-CcEEEEEccC
Q psy15549 241 AWDPKNQYVATLSS-D-RSLRTYSIQS 265 (621)
Q Consensus 241 ~~sp~~~~l~s~~~-d-g~i~iwd~~~ 265 (621)
+++|.+..|+.... . +.|..+++..
T Consensus 165 avdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 165 ALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred EEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 99997766665544 3 6787777754
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.36 E-value=0.00027 Score=64.69 Aligned_cols=212 Identities=14% Similarity=0.119 Sum_probs=122.7
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
.+.+..++|+|++. .++++...++.|. ..|.. +..... + .+.+ ....-.|++.++
T Consensus 26 ~~~lSGla~~~~~~----~L~aV~d~~~~I~--------------~ld~~-g~v~~~-i----~l~g-~~D~EGIa~~~~ 80 (255)
T 3qqz_A 26 TNNISSLTWSAQSN----TLFSTINKPAAIV--------------EMTTN-GDLIRT-I----PLDF-VKDLETIEYIGD 80 (255)
T ss_dssp CSCEEEEEEETTTT----EEEEEEETTEEEE--------------EEETT-CCEEEE-E----ECSS-CSSEEEEEECST
T ss_pred ccCcceeEEeCCCC----EEEEEECCCCeEE--------------EEeCC-CCEEEE-E----ecCC-CCChHHeEEeCC
Confidence 35799999999865 3555577788877 44443 221111 0 1222 245777888898
Q ss_pred CCEEEEEc-CCceEEEEeccCccccccceecc-cc--cccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 93 GELLASGD-DVGKEIWYLTERESGIANVEFAS-DL--SRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 93 g~~las~~-d~~v~iw~~~~~~~~~~~~~~~~-~~--~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
+.++++.. ++.+.++.+..... ........ .+ .......-.++|+|.++.|+++.+.....||.+........+
T Consensus 81 g~~~vs~E~~~~l~~~~v~~~~~-i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l- 158 (255)
T 3qqz_A 81 NQFVISDERDYAIYVISLTPNSE-VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNEL- 158 (255)
T ss_dssp TEEEEEETTTTEEEEEEECTTCC-EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCC-
T ss_pred CEEEEEECCCCcEEEEEcCCCCe-eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCce-
Confidence 88766653 66788888766532 00011111 11 124556789999999887777776666667766521000000
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEeccCC---------cceE
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THLISGSVDNTAIMWDVHKGKNLGILTEHK---------KFVQ 238 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~---------~~v~ 238 (621)
.. ..... ..-..+...+.+++++|.. .+++.+.....|.++|.. ++.+..+.-.. ....
T Consensus 159 ----~i--~~~~~----~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpE 227 (255)
T 3qqz_A 159 ----HI--SKDKA----LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAE 227 (255)
T ss_dssp ----EE--EECHH----HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEE
T ss_pred ----ee--ecchh----hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCC
Confidence 00 00000 0001233457899999954 555666667889999964 66655543221 2467
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSI 263 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~ 263 (621)
.|+|.++|+..+ .++.+.++.|.-
T Consensus 228 Gia~d~~G~lyI-vsE~n~~y~f~~ 251 (255)
T 3qqz_A 228 GVAMDASGNIYI-VSEPNRFYRFTP 251 (255)
T ss_dssp EEEECTTCCEEE-EETTTEEEEEEC
T ss_pred eeEECCCCCEEE-EcCCceEEEEEe
Confidence 999999998544 577776666643
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.36 E-value=0.00081 Score=64.58 Aligned_cols=147 Identities=10% Similarity=0.078 Sum_probs=87.1
Q ss_pred CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEE-eCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 94 ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG-DDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~-s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
.+|+.+..+.|+..++.... ....+ .....+..++|++.+..|+.+ ...+.|..+++.........
T Consensus 2 ~~ll~~~~~~I~~i~~~~~~-------~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~----- 68 (316)
T 1ijq_A 2 AYLFFTNRHEVRKMTLDRSE-------YTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY----- 68 (316)
T ss_dssp CEEEEECBSSEEEEETTSCC-------CEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------C-----
T ss_pred CEEEEECCCeEEEEECCCcc-------eEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCccc-----
Confidence 35667777788888877642 11111 223467899999866555544 45688999998762100000
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEE
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL-ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s 251 (621)
...+.........+++.+.+..| ++-...+.|.++++........+.........++++|.+.+|+.
T Consensus 69 ------------~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~ 136 (316)
T 1ijq_A 69 ------------DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW 136 (316)
T ss_dssp ------------EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEE
T ss_pred ------------EEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEE
Confidence 01122222345788888755545 44456789999998654433333333456789999997776665
Q ss_pred EeCC--CcEEEEEccC
Q psy15549 252 LSSD--RSLRTYSIQS 265 (621)
Q Consensus 252 ~~~d--g~i~iwd~~~ 265 (621)
+... +.|..+++..
T Consensus 137 ~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 137 TDWGTPAKIKKGGLNG 152 (316)
T ss_dssp EECSSSCEEEEEETTS
T ss_pred EccCCCCeEEEEcCCC
Confidence 5543 6777777743
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.34 E-value=0.0003 Score=69.74 Aligned_cols=152 Identities=11% Similarity=0.053 Sum_probs=91.6
Q ss_pred EEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEE-EEeCCCcEEEEEccCCC
Q psy15549 84 VNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLA-SGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 84 V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~-s~s~dg~i~vwd~~~~~ 162 (621)
-.|.+..+ ..+|+.+....|+.+++.... ...+......+..++|.+.+..|+ +-...+.|..+++....
T Consensus 79 ~~C~~~~~-~~~l~~~~~~~I~~i~~~~~~--------~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 149 (386)
T 3v65_B 79 RSCKALGP-EPVLLFANRIDIRQVLPHRSE--------YTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 149 (386)
T ss_dssp SCEEECSS-CCEEEEECBSCEEEECTTSCC--------CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred CeECCccc-cceeEeecCccceeeccCCCc--------EEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC
Confidence 34444444 456666666777777765431 111122234578999998655555 44466789999987654
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEECCCCcEEEEeccCCcceEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI-SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 241 (621)
.. ............+++.+.+..|+ +-...+.|.+.++........+.........++
T Consensus 150 ~~---------------------~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~gia 208 (386)
T 3v65_B 150 VE---------------------EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIA 208 (386)
T ss_dssp EE---------------------EEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEE
T ss_pred cE---------------------EEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEE
Confidence 21 11222223456788887555554 444567888888865443334443445678999
Q ss_pred EcCCCCEEEEEeC-C-CcEEEEEccC
Q psy15549 242 WDPKNQYVATLSS-D-RSLRTYSIQS 265 (621)
Q Consensus 242 ~sp~~~~l~s~~~-d-g~i~iwd~~~ 265 (621)
++|.+.+|+.... . +.|..+++..
T Consensus 209 vdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 209 LHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTS
T ss_pred EEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 9997777665554 3 5677777654
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.33 E-value=0.0003 Score=67.38 Aligned_cols=232 Identities=12% Similarity=0.037 Sum_probs=129.4
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
.....++|+++++ ++++-..++.|. .|+...... . .......+..+++.++|
T Consensus 32 ~~pegia~~~~g~-----lyv~d~~~~~I~--------------~~d~~g~~~--~-------~~~~~~~p~gia~~~dG 83 (306)
T 2p4o_A 32 TFLENLASAPDGT-----IFVTNHEVGEIV--------------SITPDGNQQ--I-------HATVEGKVSGLAFTSNG 83 (306)
T ss_dssp CCEEEEEECTTSC-----EEEEETTTTEEE--------------EECTTCCEE--E-------EEECSSEEEEEEECTTS
T ss_pred CCcceEEECCCCC-----EEEEeCCCCeEE--------------EECCCCceE--E-------EEeCCCCceeEEEcCCC
Confidence 4678899999987 777777788888 555443211 0 01112458899999999
Q ss_pred CEEEEEc-CCc--eEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC-CCCCCC
Q psy15549 94 ELLASGD-DVG--KEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD-LPEFPS 169 (621)
Q Consensus 94 ~~las~~-d~~--v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~-~~~~~~ 169 (621)
+++++.. .+. +..++...+. +..+..+. .......++..+++..+++-..++.|.++|..++.. +.....
T Consensus 84 ~l~vad~~~~~~~v~~~d~~~g~-----~~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~ 157 (306)
T 2p4o_A 84 DLVATGWNADSIPVVSLVKSDGT-----VETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHP 157 (306)
T ss_dssp CEEEEEECTTSCEEEEEECTTSC-----EEEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECG
T ss_pred cEEEEeccCCcceEEEEcCCCCe-----EEEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECC
Confidence 9766654 334 4444444431 11111111 122234555555555555554678888888764311 000000
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCC-CcE--EEEeccCCcceEEEEEcCC
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHK-GKN--LGILTEHKKFVQGVAWDPK 245 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~-~~~--~~~~~~~~~~v~~l~~sp~ 245 (621)
... .......-.....+ +++++.|+.+. ..+.|..|++.. +.. ...+.. ......++++++
T Consensus 158 -~~~-----------~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~d 222 (306)
T 2p4o_A 158 -MLA-----------RSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVE 222 (306)
T ss_dssp -GGS-----------CSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTT
T ss_pred -ccc-----------cccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCC
Confidence 000 00001111234555 77887666554 468999999864 321 111111 133567899999
Q ss_pred CCEEEEEeCCCcEEEEEccCceeee--ecccCCCCCCCccccccccccccccCCcccceeeeeec---CCCCeEEecc
Q psy15549 246 NQYVATLSSDRSLRTYSIQSKKVIS--RACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS---PDGQLLIAPS 318 (621)
Q Consensus 246 ~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s---pdg~~l~~~s 318 (621)
|+++++....+.|.++|.. ++... .+.. .-...++++|. |+++.|++++
T Consensus 223 G~l~va~~~~~~V~~~~~~-G~~~~~~~~~~-----------------------~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 223 GNLYGATHIYNSVVRIAPD-RSTTIIAQAEQ-----------------------GVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp CCEEEECBTTCCEEEECTT-CCEEEEECGGG-----------------------TCTTEEEEEECCSTTTTTEEEEEE
T ss_pred CCEEEEeCCCCeEEEECCC-CCEEEEeeccc-----------------------ccCCceEEEEecccCCCCEEEEEC
Confidence 9877666667889999975 44322 1210 01235789998 8988887766
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.31 E-value=3.4e-05 Score=70.15 Aligned_cols=181 Identities=9% Similarity=0.012 Sum_probs=112.5
Q ss_pred eEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE--EEEccCC
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV--VRFSPNG 93 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~--l~~spdg 93 (621)
...|.|+. +. ++++.+.+|.|+ ++|+.+++..... +. ..... +++. +
T Consensus 57 tqGL~~~~-~~-----Ly~stG~~g~v~--------------~iD~~Tgkv~~~~------l~---~~~FgeGit~~--g 105 (268)
T 3nok_A 57 TQGLVFHQ-GH-----FFESTGHQGTLR--------------QLSLESAQPVWME------RL---GNIFAEGLASD--G 105 (268)
T ss_dssp EEEEEEET-TE-----EEEEETTTTEEE--------------ECCSSCSSCSEEE------EC---TTCCEEEEEEC--S
T ss_pred cceEEEEC-CE-----EEEEcCCCCEEE--------------EEECCCCcEEeEE------CC---CCcceeEEEEe--C
Confidence 36888874 44 777888888999 6666655543320 11 12222 4443 4
Q ss_pred CEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 94 ELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 94 ~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
..|.... ++.+.+||..+. +.+.++..... -+.++ ++++.|+.+..++.|.++|..+.+.+..+..
T Consensus 106 ~~Ly~ltw~~~~v~V~D~~Tl-------~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V-- 173 (268)
T 3nok_A 106 ERLYQLTWTEGLLFTWSGMPP-------QRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQV-- 173 (268)
T ss_dssp SCEEEEESSSCEEEEEETTTT-------EEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEEC--
T ss_pred CEEEEEEccCCEEEEEECCcC-------cEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEe--
Confidence 4444433 888999998876 44444443222 23444 4678887777788999999998876533210
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC-------------CcceE
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH-------------KKFVQ 238 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-------------~~~v~ 238 (621)
..-...-..++.+.|. +|...+....+..|.+.|..+++.+..+... ..-..
T Consensus 174 --------------~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlN 238 (268)
T 3nok_A 174 --------------KLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLN 238 (268)
T ss_dssp --------------EETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEE
T ss_pred --------------CCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceE
Confidence 0000111245667777 7765555556889999999999988877421 13568
Q ss_pred EEEEcCCCCEEEEEeC
Q psy15549 239 GVAWDPKNQYVATLSS 254 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~ 254 (621)
.|+|+|+++.|++.+.
T Consensus 239 GIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 239 GIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEECTTTCCEEEEET
T ss_pred EEEEcCCCCEEEEeCC
Confidence 9999998766665553
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.30 E-value=0.00016 Score=75.65 Aligned_cols=91 Identities=12% Similarity=0.012 Sum_probs=57.5
Q ss_pred cCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccc-cCCCCCCC
Q psy15549 389 TENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESK-ENDPTKGE 467 (621)
Q Consensus 389 ~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 467 (621)
.+|.|.-||+.+++.+-..... .++..-.....|.+++.++.||.++.||..+|+.+-.+..+...... +.+..+|+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CcceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence 3688999999999987766432 22222222224667888999999999999999988877765543322 23335666
Q ss_pred CcccC--CCcccHHHh
Q psy15549 468 PVRSE--DKPRSAEQA 481 (621)
Q Consensus 468 ~~~s~--~~~~~~~~w 481 (621)
..+.. ...+.+-+|
T Consensus 542 qYv~~~~G~gg~~~~~ 557 (582)
T 1flg_A 542 QYLGVTVGYGGAVPLW 557 (582)
T ss_dssp EEEEEEECCCSHHHHH
T ss_pred EEEEEEccCCCccccc
Confidence 43332 223445555
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.29 E-value=0.00037 Score=72.97 Aligned_cols=51 Identities=16% Similarity=0.186 Sum_probs=36.2
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEE
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIAS 430 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~ 430 (621)
.++.++.++.|+.++.||..+++.+..+..+......-+.|..+|+ |+++.
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 3577888889999999999999999888653322222366667887 44443
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.26 E-value=0.00028 Score=64.52 Aligned_cols=214 Identities=10% Similarity=0.120 Sum_probs=125.4
Q ss_pred eeecCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEECCCCcEEEEecc-CCcceEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15549 186 KILRGHLEDVYDISWSPTSTHLI-SGSVDNTAIMWDVHKGKNLGILTE-HKKFVQGVAWDPKNQYVATLSSDRSLRTYSI 263 (621)
Q Consensus 186 ~~~~~~~~~v~~i~~spd~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~ 263 (621)
+.+.+-...+..++|+|++..|+ +...++.|...|+. ++.+..+.- .......+++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 34566667899999999776555 57778899999997 887777632 2356788999998887776556788999988
Q ss_pred cCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccC
Q psy15549 264 QSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLN 343 (621)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~ 343 (621)
.....+........+. .....+.....++|+|+++.|+++. ......+|........
T Consensus 99 ~~~~~i~~~~~~~~~~--------------~~~~~N~g~EGLA~d~~~~~L~va~-----E~~p~~i~~~~g~~~~---- 155 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPL--------------QESPTNCGFEGLAYSRQDHTFWFFK-----EKNPIEVYKVNGLLSS---- 155 (255)
T ss_dssp CTTCCEEEEEEEECCC--------------SSCCCSSCCEEEEEETTTTEEEEEE-----ESSSEEEEEEESTTCS----
T ss_pred CCCCeeeeeeeecccc--------------ccccccCCcceEEEeCCCCEEEEEE-----CcCCceEEEEcccccC----
Confidence 6654322111111000 0112233468999999998888776 3333455554310000
Q ss_pred CCceec-------CCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEec--cc---
Q psy15549 344 KPAVCL-------PSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIAN--IH--- 411 (621)
Q Consensus 344 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~h--- 411 (621)
...... ........++.+.| ..+.+++.......+.++|... +.+..+.- +.
T Consensus 156 ~~l~i~~~~~~~~~~~~~d~S~l~~dp---------------~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l 219 (255)
T 3qqz_A 156 NELHISKDKALQRQFTLDDVSGAEFNQ---------------QKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGL 219 (255)
T ss_dssp SCCEEEECHHHHHTCCSSCCCEEEEET---------------TTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGC
T ss_pred CceeeecchhhccccccCCceeEEEcC---------------CCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCc
Confidence 000000 00011123333333 1334555555677888998664 44444422 11
Q ss_pred ---ccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 412 ---YTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 412 ---~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
-..--.|+|.++|+..++ +..+.++.|.
T Consensus 220 ~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 220 SHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp SSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred ccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 125689999999985555 6666555554
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.26 E-value=4.5e-05 Score=81.70 Aligned_cols=116 Identities=14% Similarity=0.072 Sum_probs=76.1
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEEccCCCCCCCCCCCCcccccccccceeeeeee-cCCCCCeEEEEE
Q psy15549 134 VVRFSP-NGELLASGDDES-----------TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL-RGHLEDVYDISW 200 (621)
Q Consensus 134 ~i~~sp-~g~~l~s~s~dg-----------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~ 200 (621)
++++.+ ++++++.|+.+. .+.+||..+++-.. ...+ ..+.....++++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~-------------------~~~~~~~~~~~~~~~~~ 250 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD-------------------RTVTVTKHDMFCPGISM 250 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC-------------------CEEEECSCCCSSCEEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEe-------------------CcccCCCCCCccccccC
Confidence 566777 888888887543 57889988776321 1122 223333446778
Q ss_pred CCCCCEEEEEeC-CCeEEEEECCCCcEEEEeccCCc-ceEEEEEcCCCCEEEEEe-CC-----CcEEEEEccCcee
Q psy15549 201 SPTSTHLISGSV-DNTAIMWDVHKGKNLGILTEHKK-FVQGVAWDPKNQYVATLS-SD-----RSLRTYSIQSKKV 268 (621)
Q Consensus 201 spd~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~-~v~~l~~sp~~~~l~s~~-~d-----g~i~iwd~~~~~~ 268 (621)
..+++++++|+. +..+.+||..+.+-...-..+.. .-.+++..++++.++.|+ .+ ..+.+||..+.+-
T Consensus 251 ~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 251 DGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp CTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred CCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 889999999985 46899999987654332211111 123456667899999988 34 4699999987664
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.21 E-value=0.0016 Score=64.72 Aligned_cols=177 Identities=10% Similarity=0.028 Sum_probs=104.9
Q ss_pred CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEE-eCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 94 ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG-DDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~-s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
.+|+.+....|+..++..... . .+......+..++|++.+..|+.+ ...+.|+.+++.........
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~-----~---~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~----- 150 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEY-----T---SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY----- 150 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSC-----E---EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCC-----
T ss_pred ceeEEeccceeEEEccCCcce-----e---EeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcc-----
Confidence 466677777787777765421 1 122234568899999866655554 45678988888653210000
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEE
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTST-HLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s 251 (621)
.............+++.+.+. ++++-...+.|.+.++........+.........++++|.+.+|+.
T Consensus 151 ------------~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~ 218 (400)
T 3p5b_L 151 ------------DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW 218 (400)
T ss_dssp ------------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEE
T ss_pred ------------eEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEE
Confidence 122233445678899987444 4445455789999998765544444444456789999997777766
Q ss_pred EeC--CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 252 LSS--DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 252 ~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
... .+.|...++........+. . .-.....+++++++..|+.+.
T Consensus 219 td~~~~~~I~~~~~dG~~~~~~~~-~----------------------~l~~P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 219 TDWGTPAKIKKGGLNGVDIYSLVT-E----------------------NIQWPNGITLDLLSGRLYWVD 264 (400)
T ss_dssp EECSSSCCEEEEETTSCSCEEEEC-S----------------------SCSCEEEEEEETTTTEEEEEE
T ss_pred EeCCCCCEEEEEeCCCCccEEEEE-C----------------------CCCceEEEEEEeCCCEEEEEE
Confidence 553 3678888875432221111 0 011236788888877776654
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=0.0096 Score=62.76 Aligned_cols=201 Identities=9% Similarity=0.007 Sum_probs=117.7
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
...+|+|++.+. ..+++-..++.|. .+++....... .+.........+++.+.+.
T Consensus 38 ~~~~l~~d~~~~----~lywtD~~~~~I~--------------r~~~~g~~~~~-------v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 38 EASALDFDVTDN----RIYWTDISLKTIS--------------RAFMNGSALEH-------VVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp CEEEEEEETTTT----EEEEEETTTTEEE--------------EEETTSCSCEE-------EECSSCSCCCEEEEETTTT
T ss_pred ceEEEEEECCCC----EEEEEECCCCeEE--------------EEECCCCCcEE-------EEeCCCCCcceEEEEeCCC
Confidence 466778887554 2444555566666 55554322111 0111224567888988766
Q ss_pred EEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe--CCCcEEEEEccCCCCCCCCCCC
Q psy15549 95 LLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD--DESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 95 ~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s--~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
.|..+. .+.|.+.++..... ..+ +...-.....|++.|...+|+.+. ..+.|...+++....
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~-----~~l--~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~------- 158 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHR-----QVL--VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER------- 158 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTC-----EEE--ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-------
T ss_pred EEEEEECCCCEEEEEecCCCcE-----EEE--EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-------
Confidence 666555 45566666654311 111 112234578999998655555554 256777777765542
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEE
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYV 249 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 249 (621)
..+...-.....|++++++..|+.+.. .+.|..+|+..... ..+........++++.. + .|
T Consensus 159 ---------------~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~-~l 220 (628)
T 4a0p_A 159 ---------------TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-D-YI 220 (628)
T ss_dssp ---------------EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-T-EE
T ss_pred ---------------EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-C-EE
Confidence 122234456789999998777776654 57899999865443 33333334456778764 3 44
Q ss_pred EEEe-CCCcEEEEEccCceeeeec
Q psy15549 250 ATLS-SDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 250 ~s~~-~dg~i~iwd~~~~~~~~~~ 272 (621)
+.+. ..+.|...|..+++....+
T Consensus 221 y~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 221 YWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp EEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEecCCCCEEEEEECCCCCceEEE
Confidence 4444 4788998997777654444
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.20 E-value=0.00015 Score=65.37 Aligned_cols=188 Identities=11% Similarity=0.065 Sum_probs=113.6
Q ss_pred cCCC--CeEEEeccccccCCcceEEEEecCC--ceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 11 HNRD--PVLSVDIQLKQEKDNCYRIVTGGAD--SHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 11 ~h~~--~v~~l~~spd~~~~~~~~l~tg~~d--g~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
.|.. -...+.|++ +. ++.+.+.+ ..|+ .+|+.+++.... . .+. .....
T Consensus 16 phd~~~ftqGL~~~~-~~-----LyestG~~g~S~v~--------------~vD~~tgkv~~~-~----~l~---~~~fg 67 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GH-----LYESTGETGRSSVR--------------KVDLETGRILQR-A----EVP---PPYFG 67 (243)
T ss_dssp ECCTTCCEEEEEEET-TE-----EEEEECCTTSCEEE--------------EEETTTCCEEEE-E----ECC---TTCCE
T ss_pred CCCCccccccEEEEC-CE-----EEEECCCCCCceEE--------------EEECCCCCEEEE-E----eCC---CCcce
Confidence 4543 356899987 43 66666654 4888 666665544322 0 111 12222
Q ss_pred EEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 87 VRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 87 l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
.....++..|.... ++.+.+||..+. +.+.++...... +.++ ++++.|+.+..++.|.++|..+.+.+
T Consensus 68 eGi~~~~~~ly~ltw~~~~v~v~D~~tl-------~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 68 AGIVAWRDRLIQLTWRNHEGFVYDLATL-------TPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQV 137 (243)
T ss_dssp EEEEEETTEEEEEESSSSEEEEEETTTT-------EEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEE
T ss_pred eEEEEeCCEEEEEEeeCCEEEEEECCcC-------cEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEE
Confidence 22223345555544 788899998876 445554433222 3444 46676766667889999999988754
Q ss_pred CCCCCCCcccccccccceeeeeeecCC-CCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC----------
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGH-LEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH---------- 233 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---------- 233 (621)
..+. ....+. -..++.+.|. +|+.++..-.+..|.+.|..+++.+..+...
T Consensus 138 ~~I~-----------------V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~ 199 (243)
T 3mbr_X 138 GSIK-----------------VTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALT 199 (243)
T ss_dssp EEEE-----------------CEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCC
T ss_pred EEEE-----------------EccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCcccccccc
Confidence 3321 000111 1345667765 6766655556889999999999998876421
Q ss_pred ---CcceEEEEEcCCCCEEEEEeC
Q psy15549 234 ---KKFVQGVAWDPKNQYVATLSS 254 (621)
Q Consensus 234 ---~~~v~~l~~sp~~~~l~s~~~ 254 (621)
..-...++++|+++.|++.+.
T Consensus 200 ~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 200 DSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp CTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCcCCceEEEEEcCCCCEEEEECC
Confidence 134679999998887776664
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.19 E-value=0.00015 Score=78.94 Aligned_cols=198 Identities=11% Similarity=0.088 Sum_probs=105.5
Q ss_pred CeEEEecc-ccccCCcceEEEEecC-C----ceEEeeeccCccccccceeEEeccc-cccccceeeccccccccCcEEEE
Q psy15549 15 PVLSVDIQ-LKQEKDNCYRIVTGGA-D----SHVFDYLLKIPHRLKTGKIWYLTER-ESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 15 ~v~~l~~s-pd~~~~~~~~l~tg~~-d----g~v~~~d~~~~~~~~~~~iw~~~~~-~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
.+...+|| |||+ +||.+.. + ..|+ ++|+.++ +.... .+. .....+
T Consensus 175 ~~~~~~~S~PDG~-----~lAy~~~~~G~~~~~l~--------------v~dl~~g~~~l~~------~~~---~~~~~~ 226 (751)
T 2xe4_A 175 DVMEVKPAPPEHD-----LVAFSVDMSGNEVYTIE--------------FKRISDPSQTIAD------KVS---GTNGEI 226 (751)
T ss_dssp EEEEEEECTTTTC-----EEEEEEESSSSSCEEEE--------------EEETTCTTCCCCC------CEE---EECSCC
T ss_pred EEeeeEecCCCCC-----EEEEEEeCCCCceEEEE--------------EEECCCCCEeCCc------ccc---CceeeE
Confidence 57889999 9998 7775432 2 2466 8888776 42111 111 123468
Q ss_pred EEccCCCEEEEEc-CC-----ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC---CCcEEEEEc
Q psy15549 88 RFSPNGELLASGD-DV-----GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD---ESTIIVWKQ 158 (621)
Q Consensus 88 ~~spdg~~las~~-d~-----~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~---dg~i~vwd~ 158 (621)
+|+|||+.|+... +. .|.++++.++... . ..+... ........+.|+|||++|+..+. ...|.++|+
T Consensus 227 ~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~--~-~lv~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 227 VWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSE--D-VCLYEE-HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp EECSSTTEEEEEEECTTCCEEEEEEEETTSCGGG--C-EEEEEC-CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred EEecCCCEEEEEEECCCCCCCEEEEEECCCCchh--c-EEEEec-CCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 8999999888766 32 2444444332110 0 111111 22234668899999998887653 346888888
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC----CeEEEEECCCCcEEEE-eccC
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD----NTAIMWDVHKGKNLGI-LTEH 233 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d----g~i~vwd~~~~~~~~~-~~~~ 233 (621)
.++..... +.............+.|+..+.+++....+ ..|..+++.++..... +..+
T Consensus 303 ~~~~~~~~-----------------~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~ 365 (751)
T 2xe4_A 303 RKGNAHNT-----------------LEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH 365 (751)
T ss_dssp SSCTTCCC-----------------EEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC
T ss_pred CCCCCCce-----------------eEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC
Confidence 76521100 001122334455666665444444444433 3677778765322122 2223
Q ss_pred Cc--ceEEEEEcCCCCE-EEEEeCCCcEE--EEEc
Q psy15549 234 KK--FVQGVAWDPKNQY-VATLSSDRSLR--TYSI 263 (621)
Q Consensus 234 ~~--~v~~l~~sp~~~~-l~s~~~dg~i~--iwd~ 263 (621)
.. .+..+.+. +.. +++...++..+ ++++
T Consensus 366 ~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 366 SEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp CSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEEC
T ss_pred CCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEec
Confidence 33 34555554 444 45566677544 4554
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=0.0039 Score=65.68 Aligned_cols=161 Identities=9% Similarity=-0.039 Sum_probs=93.7
Q ss_pred CcEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC--CCcEEEEE
Q psy15549 82 KAVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD--ESTIIVWK 157 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~--dg~i~vwd 157 (621)
.....+++.+.+..|..+. .+.|.+.++..... . ..+...-.....|++.|.+.+|+.+.. .+.|...+
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~-----~--~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~ 156 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-----K--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAG 156 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----E--EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE-----E--EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEE
Confidence 5688999999766666654 56677777764311 1 111122345678999997655555542 45676666
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEEEeccCCcc
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLGILTEHKKF 236 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~ 236 (621)
++..... ......-.....|++++++..|+.+.. .+.|..+|+...............
T Consensus 157 ~dG~~~~---------------------~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~ 215 (619)
T 3s94_A 157 MDGSSRF---------------------IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPH 215 (619)
T ss_dssp TTSCSCE---------------------EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------
T ss_pred CCCCceE---------------------EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCC
Confidence 6544321 112223456789999997777766654 578888888644332222212223
Q ss_pred eEEEEEcCCCCEEEEEe-CCCcEEEEEccCceeeeec
Q psy15549 237 VQGVAWDPKNQYVATLS-SDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~~~ 272 (621)
..++++..+ .|+.+. ..+.|...|..+++....+
T Consensus 216 P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 216 PFALTLFED--ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp CCCEEESSS--EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred ceEEEEeCC--EEEEecCCCCEEEEEECCCCcccEEE
Confidence 346777654 455444 4678999998887655444
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.16 E-value=0.00027 Score=71.05 Aligned_cols=153 Identities=12% Similarity=0.109 Sum_probs=92.5
Q ss_pred CeEEEEECC-CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEE
Q psy15549 131 AVNVVRFSP-NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLIS 209 (621)
Q Consensus 131 ~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s 209 (621)
....++|+| ++..|+.+...+.|+.+|+..+.. ..+.........++|++++++|++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v----------------------~~~~~~~~~P~~ia~d~~G~~lyv 195 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV----------------------STVYSGLSKVRTICWTHEADSMII 195 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE----------------------EEEECCCSCEEEEEECTTSSEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE----------------------EEEecCCCCcceEEEeCCCCEEEE
Confidence 456889998 455666666557888999876542 222234556889999999996666
Q ss_pred EeCC-C----eEEEEECCCCcEE--EEeccCCcceEEEEEcC-CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCC
Q psy15549 210 GSVD-N----TAIMWDVHKGKNL--GILTEHKKFVQGVAWDP-KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDS 281 (621)
Q Consensus 210 ~~~d-g----~i~vwd~~~~~~~--~~~~~~~~~v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 281 (621)
+... + .+.+++. .+... ..+.. ......++++| ++.++++-..++.|..|+...+.........
T Consensus 196 ad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~------ 267 (430)
T 3tc9_A 196 TNDQNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ------ 267 (430)
T ss_dssp EECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS------
T ss_pred EeCCCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC------
Confidence 6542 1 3444443 33221 22221 23356788999 6666665556788999998766542211100
Q ss_pred ccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceee
Q psy15549 282 SHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISV 333 (621)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~ 333 (621)
.......++|+|+|++|+++.. ....+..++.
T Consensus 268 ----------------~~~~P~gia~~pdG~~lyv~d~----~~~~I~~~~~ 299 (430)
T 3tc9_A 268 ----------------DSGWEFHIQFHPSGNYAYIVVV----NQHYILRSDY 299 (430)
T ss_dssp ----------------SSSCCEEEEECTTSSEEEEEET----TTTEEEEEEE
T ss_pred ----------------CCCcceeEEEcCCCCEEEEEEC----CCCEEEEEeC
Confidence 0112368999999996666542 3445555543
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.14 E-value=0.0014 Score=62.75 Aligned_cols=146 Identities=12% Similarity=0.057 Sum_probs=87.4
Q ss_pred CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEE-EEEeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 94 ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL-ASGDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l-~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
.+|+.+....|+.+++...... ...+......+.+++|.+.+..| .+-...+.|..+++.......
T Consensus 5 p~ll~~~~~~I~~i~l~~~~~~------~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~------- 71 (318)
T 3sov_A 5 PLLLYANRRDLRLVDATNGKEN------ATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ------- 71 (318)
T ss_dssp CEEEEECEEEEEEEETTCTTSC------CEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC-------
T ss_pred cEEEEEccCeEEEEECCCCceE------EEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE-------
Confidence 3566666677888887654211 11111122356789999855544 444566789999887653211
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEE
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL-ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s 251 (621)
......-.....+++.+.+..| ++-...+.|.++++........+.........++++|.+.+|+.
T Consensus 72 -------------~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~ 138 (318)
T 3sov_A 72 -------------NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYW 138 (318)
T ss_dssp -------------EEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEE
T ss_pred -------------EEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEE
Confidence 1111222345678888754444 45455789999998654433333344456789999997777666
Q ss_pred EeC--CCcEEEEEccC
Q psy15549 252 LSS--DRSLRTYSIQS 265 (621)
Q Consensus 252 ~~~--dg~i~iwd~~~ 265 (621)
+.. .+.|..+++..
T Consensus 139 td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 139 TDWGEVPKIERAGMDG 154 (318)
T ss_dssp EECSSSCEEEEEETTS
T ss_pred EecCCCCEEEEEEcCC
Confidence 653 46777777753
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.08 E-value=0.0021 Score=62.57 Aligned_cols=162 Identities=9% Similarity=-0.060 Sum_probs=96.4
Q ss_pred CcEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CC-CcEEEEE
Q psy15549 82 KAVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DE-STIIVWK 157 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~d-g~i~vwd 157 (621)
.....+++.+.+..|..+. .+.|.+.+..... ....+...-.....+++.|.+..|+.+. .. +.|..++
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-------~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-------CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-------eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 3457889988665555443 5667777765431 1111222334578999999665555443 44 6788888
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEEEeccCCcc
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLGILTEHKKF 236 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~ 236 (621)
++..... ......-.....++++|++..|+.+.. .+.|..+|+........+......
T Consensus 189 ~dG~~~~---------------------~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~ 247 (349)
T 3v64_C 189 MDGSGRR---------------------IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPH 247 (349)
T ss_dssp TTSCSCE---------------------ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSS
T ss_pred CCCCCcE---------------------EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCC
Confidence 7654321 111223345789999987777666654 578999998654333333333445
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeec
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
...+++. .+..+++-...+.|..++..+++....+
T Consensus 248 P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 248 PFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred ceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 6677773 3444444445677888886666654444
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.07 E-value=0.00088 Score=67.31 Aligned_cols=143 Identities=11% Similarity=0.082 Sum_probs=83.5
Q ss_pred CeEEEEECCC--CCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE
Q psy15549 131 AVNVVRFSPN--GELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208 (621)
Q Consensus 131 ~V~~i~~sp~--g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~ 208 (621)
....++|+|+ ...|+.+...+.|+.++..++.. ..+.........++|+++|+ |+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v----------------------~~~~~~~~~P~giavd~dG~-ly 196 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYV----------------------DIKTTNIGQCADVNFTLNGD-MV 196 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEE----------------------EEECCCCSCEEEEEECTTCC-EE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEE----------------------EEeecCCCCccEEEECCCCC-EE
Confidence 4568999984 44555555448899999876652 22333455689999999999 44
Q ss_pred EEeCCC-----eEEEEECCCCcE-EEEeccCCcceEEEEEcC-CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCC
Q psy15549 209 SGSVDN-----TAIMWDVHKGKN-LGILTEHKKFVQGVAWDP-KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDS 281 (621)
Q Consensus 209 s~~~dg-----~i~vwd~~~~~~-~~~~~~~~~~v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 281 (621)
.+...+ .+..++...+.. ...+. .......++++| +|.++++-..++.|+.+|..++.....+....
T Consensus 197 Vad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~----- 270 (433)
T 4hw6_A 197 VVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD----- 270 (433)
T ss_dssp EEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS-----
T ss_pred EEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC-----
Confidence 444321 233333322211 01111 223356788999 66655555567889999987666522221100
Q ss_pred ccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 282 SHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
. ...-..++|+|+|++|+++.
T Consensus 271 ---------------~-~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 271 ---------------T-KGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp ---------------C-CSSCEEEEECTTSSEEEEEE
T ss_pred ---------------C-CCCcccEEEeCCCCEEEEEe
Confidence 0 01113699999999666654
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.01 E-value=0.0015 Score=64.74 Aligned_cols=161 Identities=9% Similarity=-0.063 Sum_probs=95.5
Q ss_pred cEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CC-CcEEEEEc
Q psy15549 83 AVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DE-STIIVWKQ 158 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~d-g~i~vwd~ 158 (621)
....+++.+.+..|..+. .+.|.+.++.... ....+...-.....+++.|.+..|+.+. .. +.|..+++
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-------~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-------CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-------eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 456788888666555544 4555555554321 1111222334678999998766655544 33 67888887
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEEEeccCCcce
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLGILTEHKKFV 237 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~v 237 (621)
+..... ......-.....|+|+|++..|+.+.. .+.|..+|+........+.......
T Consensus 233 dG~~~~---------------------~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P 291 (386)
T 3v65_B 233 DGSGRR---------------------IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHP 291 (386)
T ss_dssp TSCSCE---------------------EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSE
T ss_pred CCCCcE---------------------EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCc
Confidence 654321 112223345789999987766666554 5789999986544333333334456
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeec
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
..+++. .+..+++-...+.|..++..+++....+
T Consensus 292 ~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 292 FAITVF-EDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred eEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 778883 3444445555678888886676655544
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.00 E-value=0.0035 Score=60.38 Aligned_cols=156 Identities=13% Similarity=0.145 Sum_probs=89.6
Q ss_pred cCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 81 QKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
.+.+..+.+.+++..++++.++. ||....++.. +..+ ...+...+..+.+.+++.+++.+...+..+-+|- .
T Consensus 121 ~~~~~~i~~~~~~~~~~~~~~g~--v~~S~DgG~t---W~~~--~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~-g 192 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMITNVGA--IYRTKDSGKN---WQAL--VQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP-G 192 (327)
T ss_dssp SSCEEEEEEEETTEEEEEETTCC--EEEESSTTSS---EEEE--ECSCCCCEEEEEECTTSCEEEEETTSSEEEEECT-T
T ss_pred CCCeEEEEEECCCCEEEEeCCcc--EEEEcCCCCC---CEEe--ecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCC-C
Confidence 34577888888888887776554 4444443321 1211 2234557889999999888776654333333331 1
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec-c---CCcc
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT-E---HKKF 236 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~---~~~~ 236 (621)
+.. |... .......+..+.+.+++.+++ ++.+|.+++.+...++.-..+. . +...
T Consensus 193 G~t------------------W~~~--~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~ 251 (327)
T 2xbg_A 193 QTA------------------WEPH--NRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVG 251 (327)
T ss_dssp CSS------------------CEEE--ECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSC
T ss_pred CCc------------------eeEC--CCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcc
Confidence 211 2111 123456788999999887654 4567887776533233322222 1 2235
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCce
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKK 267 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~ 267 (621)
+.++.+.+++..++++ .+|.| .+....++
T Consensus 252 ~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~ 280 (327)
T 2xbg_A 252 FLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQ 280 (327)
T ss_dssp EEEEEESSSSCEEEEE-STTCE-EEESSTTS
T ss_pred eEEEEecCCCEEEEEe-CCCeE-EEeCCCCc
Confidence 8889999887766654 56766 34444443
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.92 E-value=0.0019 Score=64.83 Aligned_cols=155 Identities=10% Similarity=0.099 Sum_probs=89.1
Q ss_pred CeEEEeccc-cccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 15 PVLSVDIQL-KQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 15 ~v~~l~~sp-d~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
....|+++| ++. .|.++...+.|+ .+|+..+.... +.........++|+++|
T Consensus 138 ~P~~lavdp~~~g-----~Lyv~d~~~~I~--------------~id~~~~~v~~--------~~~~~~~P~~ia~d~~G 190 (430)
T 3tc9_A 138 GAVWLSFDPKNHN-----HLYLVGEQHPTR--------------LIDFEKEYVST--------VYSGLSKVRTICWTHEA 190 (430)
T ss_dssp CCCEEEEETTEEE-----EEEEEEBTEEEE--------------EEETTTTEEEE--------EECCCSCEEEEEECTTS
T ss_pred CCCEEEECCCCCC-----eEEEEeCCCcEE--------------EEECCCCEEEE--------EecCCCCcceEEEeCCC
Confidence 346788887 343 455544446666 66655432211 12234568899999999
Q ss_pred CEEEEEcC--Cc---eEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 94 ELLASGDD--VG---KEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 94 ~~las~~d--~~---v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
++|..+.. +. ..+|....+.. .....+. .......++++| +|.++++-...+.|..++.......
T Consensus 191 ~~lyvad~~~~~~~~~v~~~~~~g~~-----~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~--- 261 (430)
T 3tc9_A 191 DSMIITNDQNNNDRPNNYILTRESGF-----KVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT--- 261 (430)
T ss_dssp SEEEEEECCSCTTSEEEEEEEGGGTS-----CSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE---
T ss_pred CEEEEEeCCCCcccceEEEEeCCCce-----eeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE---
Confidence 96665542 21 23333333211 1001111 123456788999 6776666667788999998755321
Q ss_pred CCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECC
Q psy15549 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVH 222 (621)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~ 222 (621)
.....+.......++|+|+|++|+.+ ...+.|..++..
T Consensus 262 -----------------~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 262 -----------------PLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp -----------------EEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred -----------------EEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 00111122446789999999955555 457889998765
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.91 E-value=0.01 Score=56.83 Aligned_cols=206 Identities=10% Similarity=-0.053 Sum_probs=116.7
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccc---cccccceeeccccccccCcEEEEEEc
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTER---ESGIANVEFASDLSRHQKAVNVVRFS 90 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~---~~~~~~~~~~~~~~~h~~~V~~l~~s 90 (621)
....+++|++++. .++++-...+.|. .+++... ..... .+...-.....+++.
T Consensus 30 ~~p~g~~~d~~~~----~ly~~D~~~~~I~--------------~~~~~g~~~~~~~~~------~~~~~~~~p~glavd 85 (316)
T 1ijq_A 30 RNVVALDTEVASN----RIYWSDLSQRMIC--------------STQLDRAHGVSSYDT------VISRDIQAPDGLAVD 85 (316)
T ss_dssp SSEEEEEEETTTT----EEEEEETTTTEEE--------------EEEC--------CEE------EECSSCSCCCEEEEE
T ss_pred CceEEEEEEeCCC----EEEEEECCCCcEE--------------EEECCCCCCCcccEE------EEeCCCCCcCEEEEe
Confidence 3567888887654 2455555567777 5555431 11000 011222356788998
Q ss_pred cCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-C-CcEEEEEccCCCCCCC
Q psy15549 91 PNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-E-STIIVWKQKTDQDLPE 166 (621)
Q Consensus 91 pdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-d-g~i~vwd~~~~~~~~~ 166 (621)
+.+..|..+. .+.|.+++..... ....+...-.....+++.|.+..|+.+.. . +.|...+++.....
T Consensus 86 ~~~~~ly~~d~~~~~I~~~~~~g~~-------~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~-- 156 (316)
T 1ijq_A 86 WIHSNIYWTDSVLGTVSVADTKGVK-------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-- 156 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSS-------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE--
T ss_pred ecCCeEEEEECCCCEEEEEeCCCCc-------eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE--
Confidence 7655554443 6678888765431 11111222346789999996665555543 2 67888877543210
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEEEec--cCCcceEEEEEc
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLGILT--EHKKFVQGVAWD 243 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~~~~--~~~~~v~~l~~s 243 (621)
......-.....+++++++..|+.+.. .+.|..+|+.......... ........+++.
T Consensus 157 -------------------~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~ 217 (316)
T 1ijq_A 157 -------------------SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 217 (316)
T ss_dssp -------------------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE
T ss_pred -------------------EEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE
Confidence 111223345789999998777766654 5789999986433222222 122345677775
Q ss_pred CCCCEEEEEeCCCcEEEEEccCceeeeec
Q psy15549 244 PKNQYVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 244 p~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
.+..+++-...+.|..++..+++.+..+
T Consensus 218 -~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 218 -EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp -TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred -CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 3444445555678999988777655444
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.01 Score=64.00 Aligned_cols=148 Identities=10% Similarity=0.048 Sum_probs=87.8
Q ss_pred CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEE-EEeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 94 ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLA-SGDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~-s~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
.+|+.+....|+..++.... ...+......+..++|.+....|+ +-...+.|+.+++........
T Consensus 396 p~Ll~an~~~Ir~i~l~~~~--------~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~------ 461 (791)
T 3m0c_C 396 AYLFFTNRHEVRKMTLDRSE--------YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS------ 461 (791)
T ss_dssp CEEEEECBSSEEEECTTSCC--------CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------
T ss_pred cccccccccceeEeeccCCc--------ceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcc------
Confidence 35666666677776665431 111222345678999998555444 445567888888875321100
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEE
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s 251 (621)
....+.........|++.+.++.|+.+ ...+.|.+.++........+.........|+++|.+.+|+.
T Consensus 462 -----------~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYw 530 (791)
T 3m0c_C 462 -----------YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW 530 (791)
T ss_dssp -----------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEE
T ss_pred -----------eeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEE
Confidence 012223234456788888777555544 45789999998755444444344456789999998777766
Q ss_pred EeC--CCcEEEEEccCc
Q psy15549 252 LSS--DRSLRTYSIQSK 266 (621)
Q Consensus 252 ~~~--dg~i~iwd~~~~ 266 (621)
... .+.|...++...
T Consensus 531 tD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 531 TDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp EECSSSCEEEEEETTSC
T ss_pred ecCCCCCeEEEEecCCC
Confidence 653 267888887543
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0088 Score=57.18 Aligned_cols=205 Identities=9% Similarity=-0.033 Sum_probs=117.1
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
...+|+|++.+. .++++-...+.|. .+++........ .+...-.....+++.+.+.
T Consensus 36 ~~~~ld~d~~~~----~lyw~D~~~~~I~--------------r~~~~g~~~~~~------~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 36 DAAAVDFVFSHG----LIYWSDVSEEAIK--------------RTEFNKTESVQN------VVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEEGGGT----EEEEEETTTTEEE--------------EEETTSSSCCCE------EEEECCSCCCEEEEETTTT
T ss_pred ccEEEEEEeCCC----EEEEEECCCCcEE--------------EEEccCCCceEE------EEcCCCCCccEEEEEcCCC
Confidence 355777777543 2444445556666 555544321110 0112223567788987555
Q ss_pred EEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe--CCCcEEEEEccCCCCCCCCCCC
Q psy15549 95 LLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD--DESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 95 ~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s--~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
.|..+. .+.|.+++...... . ..+.........+++.|.+.+|+.+. ..+.|...+++.....
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~-----~--~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~------ 158 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLR-----K--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF------ 158 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSC-----E--EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE------
T ss_pred eEEEEECCCCEEEEEECCCCcE-----E--EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE------
Confidence 555443 56677777664311 1 11123334578999998766666554 3577888877643321
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEE
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYV 249 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 249 (621)
......-.....+++++++..|+.+.. .+.|..+|+........+.........+++.. +..+
T Consensus 159 ---------------~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~ly 222 (318)
T 3sov_A 159 ---------------IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILY 222 (318)
T ss_dssp ---------------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEE
T ss_pred ---------------EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEE
Confidence 111222345689999997777766654 67899999864333223332344556777753 3344
Q ss_pred EEEeCCCcEEEEEccCceeeeec
Q psy15549 250 ATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 250 ~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
.+-...+.|..++..+++....+
T Consensus 223 wtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 223 WTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEETTTTEEEEEETTTCCSCEEE
T ss_pred EEecCCCeEEEEECCCCCceEEE
Confidence 44445678999998777655444
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0031 Score=63.32 Aligned_cols=164 Identities=15% Similarity=0.157 Sum_probs=91.6
Q ss_pred ccCcEEEEEEccCCCEEEEEcCC---ceEEEEeccCccccccceecccccccCCCeEEEEECC-CCCEEEEEeCCCcEEE
Q psy15549 80 HQKAVNVVRFSPNGELLASGDDV---GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP-NGELLASGDDESTIIV 155 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~d~---~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp-~g~~l~s~s~dg~i~v 155 (621)
.......++|+++|+++++...+ ...++.+...... .....+. .-.....++++| +|.++++-..++.|+.
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~----~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~ 254 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF----TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISS 254 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT----CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEE
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe----ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEE
Confidence 34568999999999955554322 1222222221110 1001111 123456688999 6766666666788999
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECC--CCcE--EEEe
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVH--KGKN--LGIL 230 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~--~~~~--~~~~ 230 (621)
++..++.....+ . ..+....-..++|+|++++|+.+. ..+.|+.+++. ++.. ...+
T Consensus 255 ~d~~~g~~~~~~------------------~-~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ 315 (433)
T 4hw6_A 255 YDPATGTLTEEE------------------V-MMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIV 315 (433)
T ss_dssp ECTTTCCEEEEE------------------E-ECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEE
T ss_pred EECCCCeEEEEE------------------e-ccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEE
Confidence 988765431000 0 111122235799999999665554 46789998865 2321 1122
Q ss_pred ccC---------------CcceEEEEE---------cCCCCEEEEEeCCCcEEEEEccCcee
Q psy15549 231 TEH---------------KKFVQGVAW---------DPKNQYVATLSSDRSLRTYSIQSKKV 268 (621)
Q Consensus 231 ~~~---------------~~~v~~l~~---------sp~~~~l~s~~~dg~i~iwd~~~~~~ 268 (621)
.+. -.....+++ .++|.++++-...+.|+.++. ++..
T Consensus 316 ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 316 CGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV 376 (433)
T ss_dssp EECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE
T ss_pred EecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE
Confidence 111 123567899 667776666566778999985 4543
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00012 Score=78.46 Aligned_cols=118 Identities=9% Similarity=0.087 Sum_probs=67.2
Q ss_pred CCeEEEEECCCCCEEEEEe-CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCC-CEE
Q psy15549 130 KAVNVVRFSPNGELLASGD-DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS-THL 207 (621)
Q Consensus 130 ~~V~~i~~sp~g~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~-~~l 207 (621)
..+..++|.+.+..|+.+. ..+.|+.+++......... ...+.........|++.+.+ +++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~-----------------~~~i~~~~~~P~glavD~~~g~LY 468 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY-----------------DTVISRDIQAPDGLAVDWIHSNIY 468 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCC-----------------CCBCCSCC--CCCEECCCSSSBCE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcce-----------------EEEEeCCCCCcceEEEEeeCCcEE
Confidence 3466789998766666554 5578999998752100000 01111112234567887644 444
Q ss_pred EEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeC--CCcEEEEEcc
Q psy15549 208 ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS--DRSLRTYSIQ 264 (621)
Q Consensus 208 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~--dg~i~iwd~~ 264 (621)
++-...+.|.++++........+.........++++|.+.+|+.+.. .+.|..+++.
T Consensus 469 ~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 469 WTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 527 (699)
T ss_dssp ECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS
T ss_pred EEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCC
Confidence 44445688999998755444333333345678899997666555443 2567666664
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.81 E-value=0.0024 Score=60.74 Aligned_cols=99 Identities=14% Similarity=0.268 Sum_probs=61.2
Q ss_pred CCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC----CC---EEEEEeC
Q psy15549 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT----ST---HLISGSV 212 (621)
Q Consensus 140 ~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd----~~---~l~s~~~ 212 (621)
...+++.....+-+.+||+ +++.+ ..+.. +.++.+..-|+ |+ ++++...
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l---------------------~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R 94 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKML---------------------HSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNR 94 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEE---------------------EEECC--SCEEEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEE---------------------EEccC--CCcccEEEecccccCCceEeEEEEeCC
Confidence 3446666677788999999 66643 23322 45666666552 22 2333333
Q ss_pred ---CCeEEEEECC--CCcEEEEecc------CC-cceEEEEE--cCC-CC-EEEEEeCCCcEEEEEc
Q psy15549 213 ---DNTAIMWDVH--KGKNLGILTE------HK-KFVQGVAW--DPK-NQ-YVATLSSDRSLRTYSI 263 (621)
Q Consensus 213 ---dg~i~vwd~~--~~~~~~~~~~------~~-~~v~~l~~--sp~-~~-~l~s~~~dg~i~iwd~ 263 (621)
+++|.+|++. ++. +..+.. .. ..+..+|+ +|. +. ++++...+|.+..|++
T Consensus 95 ~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l 160 (355)
T 3amr_A 95 SEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYEL 160 (355)
T ss_dssp STTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEE
T ss_pred CCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEE
Confidence 4789999773 333 444421 11 45667777 774 44 5777888899999988
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.79 E-value=0.021 Score=56.63 Aligned_cols=163 Identities=9% Similarity=-0.068 Sum_probs=97.8
Q ss_pred cCcEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe--CCCcEEEE
Q psy15549 81 QKAVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD--DESTIIVW 156 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s--~dg~i~vw 156 (621)
......+++.+.+..|..+. .+.|.+.++.... ....+...-.....|++.|.+.+|+... ..+.|...
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~-------~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~ 230 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 230 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS-------EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEE
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCc-------eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEE
Confidence 45678899998555555544 5566666665431 1111222334578999999666665554 23678888
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEEEecc--C
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLGILTE--H 233 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~--~ 233 (621)
+++..... ......-.....|++++++..|+.+.. .+.|..+|+........+.. .
T Consensus 231 ~~dG~~~~---------------------~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~ 289 (400)
T 3p5b_L 231 GLNGVDIY---------------------SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 289 (400)
T ss_dssp ETTSCSCE---------------------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSST
T ss_pred eCCCCccE---------------------EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCC
Confidence 87654321 122233356789999998877777654 57899999865433222222 2
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeec
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 272 (621)
.....++++. .+..+++-...+.|..+|..+++.+..+
T Consensus 290 l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 290 LAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp TSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred CCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 2344567763 2334444555678998997777665544
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.034 Score=56.04 Aligned_cols=161 Identities=11% Similarity=0.150 Sum_probs=88.9
Q ss_pred cEEEEEEcc-CCCEEEEEcC--CceEEEEeccCccccccceecccc-cccCCCeEEEEE-------CCCCCEEEEEeCCC
Q psy15549 83 AVNVVRFSP-NGELLASGDD--VGKEIWYLTERESGIANVEFASDL-SRHQKAVNVVRF-------SPNGELLASGDDES 151 (621)
Q Consensus 83 ~V~~l~~sp-dg~~las~~d--~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~i~~-------sp~g~~l~s~s~dg 151 (621)
....|+|+| +...|..+.+ +.|++.|...+. +..+... .........++| +++|++|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-----v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-----LSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTE-----EEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCE-----EEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 356899998 4555555543 446666655541 1111111 112335889999 99999666665443
Q ss_pred -------cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECC-
Q psy15549 152 -------TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-STHLISGSVDNTAIMWDVH- 222 (621)
Q Consensus 152 -------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-~~~l~s~~~dg~i~vwd~~- 222 (621)
.|.+++.......... ..+.....+ .....++++|+ +.++++-..++.|..+|+.
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~------------~~~~~v~~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~ 278 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDR------------SDIQLIAAY----KQCNGATIHPINGELYFNSYEKGQVFRLDLVD 278 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTT------------SCEEEEEEE----SCCCCEEECTTTCCEEEEETTTTEEEEECHHH
T ss_pred CCcccCceEEEEecCCCCceeec------------ccceeeccC----CCceEEEEcCCCCeEEEEECCCCEEEEEeccc
Confidence 2555553331111000 000001111 23456788995 4555555667889999997
Q ss_pred ------CCcE-----------EEE-e-ccCCcceEEEEEcCCCCEEEEEe-CCCcEEEEEcc
Q psy15549 223 ------KGKN-----------LGI-L-TEHKKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQ 264 (621)
Q Consensus 223 ------~~~~-----------~~~-~-~~~~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~ 264 (621)
++.. ... + .........++|+|+|++|+.+. ....|+.++..
T Consensus 279 ~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 279 YFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp HHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 5543 111 1 12234467899999999765554 45778886653
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.03 Score=54.42 Aligned_cols=105 Identities=9% Similarity=0.061 Sum_probs=59.9
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC---CCE
Q psy15549 130 KAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT---STH 206 (621)
Q Consensus 130 ~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd---~~~ 206 (621)
.....++|.|+|+++ .+..+|.|++++. .+. ..+. -.............|+++|+ +..
T Consensus 29 ~~P~~ia~~pdG~l~-V~e~~g~I~~~d~-~G~--~~~~---------------~~~v~~~g~~g~~gia~~pdf~~~g~ 89 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYL-VTERPGRLVLISP-SGK--KLVA---------------SFDVANVGEAGLLGLALHPEFPKKSW 89 (354)
T ss_dssp SCEEEEEEEETTEEE-EEETTTEEEEECS-SCE--EEEE---------------ECCCCCSTTCSEEEEEECTTTTTSCE
T ss_pred CCCeEEEEcCCCeEE-EEeCCCEEEEEeC-CCc--eEee---------------ccceeecCCCceeeEEeCCCCCcCCE
Confidence 356789999999754 4456699998863 222 1110 00011122356889999997 445
Q ss_pred EEEEeC----C----CeEEEEECCCC--c-----EE-EEec-cCCcceEEEEEcCCCCEEEEEe
Q psy15549 207 LISGSV----D----NTAIMWDVHKG--K-----NL-GILT-EHKKFVQGVAWDPKNQYVATLS 253 (621)
Q Consensus 207 l~s~~~----d----g~i~vwd~~~~--~-----~~-~~~~-~~~~~v~~l~~sp~~~~l~s~~ 253 (621)
|+++.. + +.|..|+.... . .+ ..+. ........++|.|+|.++++.+
T Consensus 90 lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 90 VYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 554433 2 56777876543 1 11 1122 1112346799999998666543
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.084 Score=55.59 Aligned_cols=174 Identities=10% Similarity=-0.023 Sum_probs=104.1
Q ss_pred CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEE-EeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 94 ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS-GDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s-~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
.+|+.+....|+..++..... .....+. .-..+..++|++.+..|+. -..++.|..+++......
T Consensus 7 ~~Ll~s~~~~I~~i~l~~~~~-----~~~~~~~-~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~-------- 72 (628)
T 4a0p_A 7 AFLLFSRRADIRRISLETNNN-----NVAIPLT-GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE-------- 72 (628)
T ss_dssp CEEEEEETTEEEEEESSCTTC-----EEECCCC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--------
T ss_pred cEEEEEeCCcEEEEECCCCCc-----ceEEEcC-CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE--------
Confidence 466666777888888875421 1111121 2345789999996665554 446788998888754321
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEE
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s 251 (621)
............+++.+.+..|+.+ ...+.|.+.++........+...-.....++++|...+|+.
T Consensus 73 -------------~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~ 139 (628)
T 4a0p_A 73 -------------HVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYW 139 (628)
T ss_dssp -------------EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEE
T ss_pred -------------EEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEE
Confidence 1222222346678887765555444 45688999998654433333334455789999997666666
Q ss_pred EeC--CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 252 LSS--DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 252 ~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
... .+.|...++.......... .-.....+++++++..|+.+.
T Consensus 140 tD~g~~~~I~r~~~dG~~~~~l~~------------------------~~~~P~GlalD~~~~~LY~aD 184 (628)
T 4a0p_A 140 TEWGGKPKIDRAAMDGSERTTLVP------------------------NVGRANGLTIDYAKRRLYWTD 184 (628)
T ss_dssp EECSSSCEEEEEETTSCSCEEEEC------------------------SCSSEEEEEEETTTTEEEEEE
T ss_pred eCCCCCCEEEEEeCCCCceEEEEC------------------------CCCCcceEEEccccCEEEEEE
Confidence 553 4567777765433221111 011346889999877777654
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.01 Score=56.44 Aligned_cols=174 Identities=14% Similarity=0.178 Sum_probs=103.7
Q ss_pred CcEEEEEEcc----CCCE--EEEEc--C---CceEEEEeccCccccccceecccc--c-ccC-CCeEEEEE--CCC-CC-
Q psy15549 82 KAVNVVRFSP----NGEL--LASGD--D---VGKEIWYLTERESGIANVEFASDL--S-RHQ-KAVNVVRF--SPN-GE- 142 (621)
Q Consensus 82 ~~V~~l~~sp----dg~~--las~~--d---~~v~iw~~~~~~~~~~~~~~~~~~--~-~h~-~~V~~i~~--sp~-g~- 142 (621)
+.++.+..-| .|+. |+.++ + +.+.+|++...... +..+... . +.. ..+..+|+ +|. +.
T Consensus 68 g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~---l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~ 144 (355)
T 3amr_A 68 GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT---LQSMTDPDHPIATAINEVYGFTLYHSQKTGKY 144 (355)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC---EEECSCTTSCEECCCSSCCCEEEEECTTTCCE
T ss_pred CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc---eeeccccccCcCCCCCCeeEEEEEecCCCCcE
Confidence 4566666555 2322 34333 3 56899988533221 1222111 0 111 45667777 774 44
Q ss_pred EEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC
Q psy15549 143 LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH 222 (621)
Q Consensus 143 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~ 222 (621)
++++...+|.+..|++.....-. ......+.+. ..+.+..|...+...+|+.+-++.-|..|+.+
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~--------------~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGY--------------ISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSC--------------EEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred EEEEECCCCeEEEEEEEeCCCCc--------------ccceEEEEec-CCCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 67788889999999985421100 0011123333 24578899999988899999999778888865
Q ss_pred -----CCcEEEEec-cC-CcceEEEEE--cCCCC-EEEEEe-CCCcEEEEEcc-Cceeeeecc
Q psy15549 223 -----KGKNLGILT-EH-KKFVQGVAW--DPKNQ-YVATLS-SDRSLRTYSIQ-SKKVISRAC 273 (621)
Q Consensus 223 -----~~~~~~~~~-~~-~~~v~~l~~--sp~~~-~l~s~~-~dg~i~iwd~~-~~~~~~~~~ 273 (621)
+++.+..+. ++ ...+..|++ .++++ +|++.+ .++++.+||.. +.+.+..+.
T Consensus 210 p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 210 PDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp TTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred cCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 345555542 22 236788887 45566 676666 46799999996 566665554
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0055 Score=57.70 Aligned_cols=177 Identities=10% Similarity=0.125 Sum_probs=105.6
Q ss_pred CCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCcEEEEeccC-------CcceEEEEE---cCCCCEEEEEeC----
Q psy15549 190 GHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGKNLGILTEH-------KKFVQGVAW---DPKNQYVATLSS---- 254 (621)
Q Consensus 190 ~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~-------~~~v~~l~~---sp~~~~l~s~~~---- 254 (621)
.......+++|++....|..++ ..+.|..||...+......... ...+..+.| .|+++++++...
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3444456789988666666666 6899999999766443332221 113579999 688777775432
Q ss_pred ---------CCcEEEEEcc---CceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 255 ---------DRSLRTYSIQ---SKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 255 ---------dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
+..|..||+. +++.+......... +...+. ..........++..++|+..++.+.
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~--------~~~~~~--~g~~~~~~nDvavD~~GnaYVt~s~--- 156 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQ--------DEFEKK--AGKRPFGVVQSAQDRDGNSYVAFAL--- 156 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHH--------HHHHHH--HSSCCEEEEEEEECTTSCEEEEEEE---
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCcccc--------cccccc--ccccccCCceeEECCCCCEEEeCCC---
Confidence 5779999998 77665443211000 000000 0001123678999999998876551
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCc-EEEEeCCCC
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENN-ILLYDTQHA 401 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~ 401 (621)
. ...|+-.+-||. +..|.+...
T Consensus 157 --~-------------------------------------------------------~~~I~rV~pdG~~~~~~~~~~~ 179 (334)
T 2p9w_A 157 --G-------------------------------------------------------MPAIARVSADGKTVSTFAWESG 179 (334)
T ss_dssp --S-------------------------------------------------------SCEEEEECTTSCCEEEEEECCC
T ss_pred --C-------------------------------------------------------CCeEEEEeCCCCEEeeeeecCC
Confidence 1 011222223332 455654332
Q ss_pred ceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 402 SPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 402 ~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
. .......+.|+++|+|..|++....|.|..+|+.
T Consensus 180 ~------~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 180 N------GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp C------SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred C------cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 1 1122347799999999999988779999999987
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.026 Score=56.85 Aligned_cols=222 Identities=10% Similarity=0.065 Sum_probs=110.7
Q ss_pred CeEEEeccc-cccCCcceEEEEec-CCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEE---
Q psy15549 15 PVLSVDIQL-KQEKDNCYRIVTGG-ADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRF--- 89 (621)
Q Consensus 15 ~v~~l~~sp-d~~~~~~~~l~tg~-~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~--- 89 (621)
.-..|+|+| +.. .|+++. ..+.|+ +.|+..+..... ...-.........++|
T Consensus 140 ~p~~la~dp~~~~-----~Lyv~~~~~~~i~--------------~ID~~~~~v~~l----~~~~~~~~~~p~~ia~~~~ 196 (496)
T 3kya_A 140 DNGRLAFDPLNKD-----HLYICYDGHKAIQ--------------LIDLKNRMLSSP----LNINTIPTNRIRSIAFNKK 196 (496)
T ss_dssp SEEEEEEETTEEE-----EEEEEEETEEEEE--------------EEETTTTEEEEE----ECCTTSSCSBEEEEEECCC
T ss_pred CCCEEEEccCCCC-----EEEEEECCCCeEE--------------EEECCCCEEEEE----EccCccccCCCcEEEEeec
Confidence 356889998 343 444443 345566 555554322111 0001112346899999
Q ss_pred ----ccCCCEEEEEcCCc------eEEEEeccCc-ccccc---ceecccccccCCCeEEEEECCC-CCEEEEEeCCCcEE
Q psy15549 90 ----SPNGELLASGDDVG------KEIWYLTERE-SGIAN---VEFASDLSRHQKAVNVVRFSPN-GELLASGDDESTII 154 (621)
Q Consensus 90 ----spdg~~las~~d~~------v~iw~~~~~~-~~~~~---~~~~~~~~~h~~~V~~i~~sp~-g~~l~s~s~dg~i~ 154 (621)
+++|.+|+++.+.. ..++.+.... ..... ...+..+ .....++++|+ +.++++-..++.|.
T Consensus 197 ~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~----~~p~giavdp~~g~LYvtd~~~g~V~ 272 (496)
T 3kya_A 197 IEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY----KQCNGATIHPINGELYFNSYEKGQVF 272 (496)
T ss_dssp BTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE----SCCCCEEECTTTCCEEEEETTTTEEE
T ss_pred ccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC----CCceEEEEcCCCCeEEEEECCCCEEE
Confidence 99999777665322 2333332211 11100 0111111 23456788994 55555666788899
Q ss_pred EEEcc-------CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECC--CC
Q psy15549 155 VWKQK-------TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVH--KG 224 (621)
Q Consensus 155 vwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~--~~ 224 (621)
.+|+. ++..-...... ... ....... .+.....+.|+|+|+|++|+.+. ..+.|+.++.. ++
T Consensus 273 r~d~~~~~~~~~tg~~~tp~~~~-----~~g--~~~~l~~-~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~ 344 (496)
T 3kya_A 273 RLDLVDYFKTIKNGGSWDPIVKN-----NPN--TFKQLFT-IADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKK 344 (496)
T ss_dssp EECHHHHHHHHHTTCCCCCBGGG-----CTT--TEEEEEE-CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred EEecccccccccCceeecccccc-----ccc--ccceeEe-cCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcc
Confidence 99997 44420000000 000 0000011 12234468999999999655554 56788886653 33
Q ss_pred cE--EEEeccC---C------------cceE-EEEEc-------CCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 225 KN--LGILTEH---K------------KFVQ-GVAWD-------PKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 225 ~~--~~~~~~~---~------------~~v~-~l~~s-------p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
.. ...+.+. . .... .++.. +++.++++-.....|+.++ .++. +.++.
T Consensus 345 ~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~Tia 416 (496)
T 3kya_A 345 EFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYA 416 (496)
T ss_dssp EECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEE
T ss_pred eecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEe
Confidence 21 0122111 0 1233 44554 4556555555678899998 3553 44443
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.027 Score=54.70 Aligned_cols=104 Identities=10% Similarity=0.154 Sum_probs=60.6
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC---CCEE
Q psy15549 131 AVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT---STHL 207 (621)
Q Consensus 131 ~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd---~~~l 207 (621)
....++|.|+|+++++ ..+|.|.+++ .+.. ..+ .-.............|+|+|+ +..|
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~-~~~---------------~~~~v~~~g~~~p~gia~~pdf~~~g~l 92 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRL-STY---------------AELSVYHRGESGLLGLALHPRFPQEPYV 92 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEE-EEE---------------EECCCCCSTTCSEEEEEECTTTTTSCEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCc-cEe---------------ecceEeecCCCCceeEEECCCCCCCCEE
Confidence 4678999999985554 5669999988 3321 000 000011223456899999998 5555
Q ss_pred EEEeC-C-----CeEEEEECCCCc-----EE-EEec---cCCcceEEEEEcCCCCEEEEEe
Q psy15549 208 ISGSV-D-----NTAIMWDVHKGK-----NL-GILT---EHKKFVQGVAWDPKNQYVATLS 253 (621)
Q Consensus 208 ~s~~~-d-----g~i~vwd~~~~~-----~~-~~~~---~~~~~v~~l~~sp~~~~l~s~~ 253 (621)
+++.. . +.|..|+...+. .+ ..+. ........++|.|+|.+.++.+
T Consensus 93 Yv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 93 YAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 55443 2 678888876431 11 1132 1112346899999997665543
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.039 Score=59.60 Aligned_cols=162 Identities=9% Similarity=-0.070 Sum_probs=97.7
Q ss_pred cCcEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-C-CCcEEEE
Q psy15549 81 QKAVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-D-ESTIIVW 156 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~-dg~i~vw 156 (621)
......|++.+.+..|+.+. .+.|.+.++.... ....+...-.....|++.|.+.+|+.+. . .+.|.+.
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-------~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~ 542 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 542 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-------EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEE
Confidence 45667899998887666655 5567777766431 1111222334578999999766665554 2 2678888
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEEEecc--C
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLGILTE--H 233 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~--~ 233 (621)
++...... ......-.....|++.+.+..|+.+.. .+.|..+++........+.. .
T Consensus 543 ~~dG~~~~---------------------~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~ 601 (791)
T 3m0c_C 543 GLNGVDIY---------------------SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 601 (791)
T ss_dssp ETTSCCEE---------------------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTT
T ss_pred ecCCCceE---------------------EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCc
Confidence 87654321 222233456889999987777776654 56899999865443333322 1
Q ss_pred CcceEEEEEcCCCCEEEEEe-CCCcEEEEEccCceeeeec
Q psy15549 234 KKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~~~ 272 (621)
-....+|++. +.+|+.+. ..+.|...+..+++.+..+
T Consensus 602 l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 602 LAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred cCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 2234466664 44555554 4567887887777554443
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.032 Score=54.18 Aligned_cols=108 Identities=7% Similarity=0.020 Sum_probs=56.7
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC--
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-- 92 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd-- 92 (621)
.-..|+|.|||+ ++++ ..+|.|. +++ .+.. ..+.-...+.........|+|+|+
T Consensus 32 ~P~~ia~~pdG~-----l~V~-e~~g~I~--------------~i~--~g~~--~~~~~~~v~~~g~~~p~gia~~pdf~ 87 (352)
T 2ism_A 32 VPWALAFLPDGG-----MLIA-ERPGRIR--------------LFR--EGRL--STYAELSVYHRGESGLLGLALHPRFP 87 (352)
T ss_dssp CEEEEEECTTSC-----EEEE-ETTTEEE--------------EEE--TTEE--EEEEECCCCCSTTCSEEEEEECTTTT
T ss_pred CceEEEEcCCCe-----EEEE-eCCCeEE--------------EEE--CCCc--cEeecceEeecCCCCceeEEECCCCC
Confidence 467999999996 5555 4458887 555 2211 000000111223456889999998
Q ss_pred -CCEEEEEc--C-----CceEEEEeccCccccccce-eccccc---ccCCCeEEEEECCCCCEEEEEe
Q psy15549 93 -GELLASGD--D-----VGKEIWYLTERESGIANVE-FASDLS---RHQKAVNVVRFSPNGELLASGD 148 (621)
Q Consensus 93 -g~~las~~--d-----~~v~iw~~~~~~~~~~~~~-~~~~~~---~h~~~V~~i~~sp~g~~l~s~s 148 (621)
+..|..+. . +.|..|+..... ....+ .+..+. +.......++|.|+|.++++.+
T Consensus 88 ~~g~lYv~~~~~~~~~~~~v~r~~~~~~~--~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 88 QEPYVYAYRTVAEGGLRNQVVRLRHLGER--GVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEEECSSC--EEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCEEEEEEecCCCCCccEEEEEEeCCCC--cCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 55444433 2 456666665321 10001 111122 1112235899999997666643
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.037 Score=53.25 Aligned_cols=156 Identities=12% Similarity=0.156 Sum_probs=90.2
Q ss_pred cCcEEEEEEcc--CCC-EEEEEc----CCceEEEEeccCccccccceeccccccc-CCCeEEEEECCCCCEEEEEeC---
Q psy15549 81 QKAVNVVRFSP--NGE-LLASGD----DVGKEIWYLTERESGIANVEFASDLSRH-QKAVNVVRFSPNGELLASGDD--- 149 (621)
Q Consensus 81 ~~~V~~l~~sp--dg~-~las~~----d~~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~i~~sp~g~~l~s~s~--- 149 (621)
......+.+.+ +|. +|..+. +..+.+|++...... ...+..+.+. -...+.+.+.++|.+.++...
T Consensus 111 ~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~---~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ft 187 (355)
T 3sre_A 111 SFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKS---LLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFI 187 (355)
T ss_dssp GCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTE---EEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCS
T ss_pred ceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCE---EEEEeccccCCCCCCceEEEeCCCCEEecCCcEeC
Confidence 34566666655 454 344442 456889988765432 2333334332 235789999999987776541
Q ss_pred C------------CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeE
Q psy15549 150 E------------STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTA 216 (621)
Q Consensus 150 d------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i 216 (621)
| ..=.||.+..++ . ..+...-...+.++|+||++.|+.+. ..+.|
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~~~-~---------------------~~~~~~l~~pNGia~spDg~~lYvadt~~~~I 245 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSPND-V---------------------RVVAEGFDFANGINISPDGKYVYIAELLAHKI 245 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECTTC-C---------------------EEEEEEESSEEEEEECTTSSEEEEEEGGGTEE
T ss_pred CcccccchhhccCCccEEEEEECCe-E---------------------EEeecCCcccCcceECCCCCEEEEEeCCCCeE
Confidence 1 122333333322 1 22222334568999999998877765 46899
Q ss_pred EEEECCC-CcE--EEEeccCCcceEEEEEcC-CCCEEEEEeCC-CcEEEEE
Q psy15549 217 IMWDVHK-GKN--LGILTEHKKFVQGVAWDP-KNQYVATLSSD-RSLRTYS 262 (621)
Q Consensus 217 ~vwd~~~-~~~--~~~~~~~~~~v~~l~~sp-~~~~l~s~~~d-g~i~iwd 262 (621)
..|++.. +.. ...+ ...+..-.+++.+ +|++.+++..+ +.|..|+
T Consensus 246 ~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 246 HVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp EEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCC
T ss_pred EEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEEC
Confidence 9999863 322 2233 2245567788888 58877766544 2344344
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0013 Score=70.40 Aligned_cols=162 Identities=9% Similarity=-0.086 Sum_probs=90.3
Q ss_pred cEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC--CCcEEEEEc
Q psy15549 83 AVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD--ESTIIVWKQ 158 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~--dg~i~vwd~ 158 (621)
....|++.+.+..|+.+. .+.|.++++.... ....+.........+++.|.+.+|+.+.. .+.|.++++
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~-------~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~ 526 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-------RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 526 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC-------EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCS
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCc-------eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeC
Confidence 355678886554444433 6677777765431 11111112234567889986655554432 267777776
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCcEEEEecc--CCc
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGKNLGILTE--HKK 235 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~--~~~ 235 (621)
...... ......-.....|+|+|++..|+.+. ..+.|.++++........+.. ...
T Consensus 527 dG~~~~---------------------~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~ 585 (699)
T 1n7d_A 527 NGVDIY---------------------SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA 585 (699)
T ss_dssp SSCCCC---------------------EESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCS
T ss_pred CCCCee---------------------EEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCC
Confidence 543221 11112223456799999766555554 467899999864333222221 122
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecc
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 273 (621)
....|++..+ .++++....+.|..++..+++.+..+.
T Consensus 586 ~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 586 HPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp SCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred CceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 3345666543 334444456789999988888776653
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.11 Score=50.49 Aligned_cols=227 Identities=8% Similarity=0.061 Sum_probs=135.8
Q ss_pred EeccccccCCcceEEEEecCCceEEeeeccCcccc-------------------------ccceeEEeccccccccceee
Q psy15549 19 VDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRL-------------------------KTGKIWYLTERESGIANVEF 73 (621)
Q Consensus 19 l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~-------------------------~~~~iw~~~~~~~~~~~~~~ 73 (621)
.-.+|..+ .||.-. ...+.+||+.+.+.+ ..+--|++.....+..-++.
T Consensus 71 AIMnP~~~-----iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT~taVyHWsi~~~s~P~kvFdR 144 (494)
T 1bpo_A 71 AIMNPASK-----VIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDR 144 (494)
T ss_dssp EEECSSSS-----CEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEECSSEEEEEESSSSCCCEEEEEC
T ss_pred eeeCCCCc-----EEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEcCCeeEEecccCCCCchhheec
Confidence 34566665 565554 667888888654433 23334555432222221222
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc--------CCceEEEEeccCccccccceecccccccCCCeEEEEECCCC---C
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD--------DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG---E 142 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~--------d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g---~ 142 (621)
...+. ...|..-..+++.++++..+ .|.+++|..+.. ..+.+.||......+.+.-+. +
T Consensus 145 ~~~L~--~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--------~sQ~ieGhaa~F~~~~~~g~~~~~~ 214 (494)
T 1bpo_A 145 HSSLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--------VSQPIEGHAASFAQFKMEGNAEEST 214 (494)
T ss_dssp CGGGT--TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC--------CEEEECCSEEEEEEEECTTCSSEEE
T ss_pred chhcc--cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc--------ccchheeeeeeeEEEecCCCCCCce
Confidence 22232 35677778899999987543 244688988874 355677887655444443211 2
Q ss_pred EEEEEeC---CCcEEEEEccCC-CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEE
Q psy15549 143 LLASGDD---ESTIIVWKQKTD-QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIM 218 (621)
Q Consensus 143 ~l~s~s~---dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~v 218 (621)
+|+.+.. .+.++|.++... .....++. ..-.+...-.....-..++..++.-..+..-+.-|.|++
T Consensus 215 lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~k----------k~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~l 284 (494)
T 1bpo_A 215 LFCFAVRGQAGGKLHIIEVGTPPTGNQPFPK----------KAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHL 284 (494)
T ss_dssp EEEEEECSTTCCEEEEEECSCCCTTCCCCCC----------EEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred EEEEEEecCCCcEEEEEEcCCCccCCCCccc----------eeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEE
Confidence 4444443 278999998654 12112210 000000011123445678889998889999999999999
Q ss_pred EECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeee
Q psy15549 219 WDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISR 271 (621)
Q Consensus 219 wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~ 271 (621)
||++++.++..-+--...|-.-+.+....=++.....|.|.--.+.....+..
T Consensus 285 yDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ivpy 337 (494)
T 1bpo_A 285 YDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPY 337 (494)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHHHH
T ss_pred EecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccchhh
Confidence 99999999987765566665555555555566677888877777766555443
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.1 Score=50.60 Aligned_cols=111 Identities=11% Similarity=0.015 Sum_probs=56.5
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC-
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN- 92 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd- 92 (621)
..-.+|+|.|||+ ++++ ..+|.|. +++. .+. ..+.-.............|+|+|+
T Consensus 29 ~~P~~ia~~pdG~-----l~V~-e~~g~I~--------------~~d~-~G~---~~~~~~~v~~~g~~g~~gia~~pdf 84 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-----YLVT-ERPGRLV--------------LISP-SGK---KLVASFDVANVGEAGLLGLALHPEF 84 (354)
T ss_dssp SCEEEEEEEETTE-----EEEE-ETTTEEE--------------EECS-SCE---EEEEECCCCCSTTCSEEEEEECTTT
T ss_pred CCCeEEEEcCCCe-----EEEE-eCCCEEE--------------EEeC-CCc---eEeeccceeecCCCceeeEEeCCCC
Confidence 4568999999995 5544 5558887 5542 221 101000011222356889999997
Q ss_pred ---CCEEEEEcC--------CceEEEEeccCccccccceec-cccc-ccCCCeEEEEECCCCCEEEEEe
Q psy15549 93 ---GELLASGDD--------VGKEIWYLTERESGIANVEFA-SDLS-RHQKAVNVVRFSPNGELLASGD 148 (621)
Q Consensus 93 ---g~~las~~d--------~~v~iw~~~~~~~~~~~~~~~-~~~~-~h~~~V~~i~~sp~g~~l~s~s 148 (621)
+.+.++-.. +.|..|+...........+.+ ..+. ........++|.|+|.++++.+
T Consensus 85 ~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 85 PKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp TTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred CcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 444443322 445556654431111111111 1111 1111245799999998766644
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.008 Score=56.58 Aligned_cols=156 Identities=8% Similarity=0.149 Sum_probs=102.4
Q ss_pred cEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccc----c--CCCeEEEEE---CCCCCEEEEEe---
Q psy15549 83 AVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSR----H--QKAVNVVRF---SPNGELLASGD--- 148 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~----h--~~~V~~i~~---sp~g~~l~s~s--- 148 (621)
---+++|.+....|..++ .+.|..|+...+.. ..+ .+.+ . ...+..+.| .|+++++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~-----~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH-----FNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCE-----EEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeE-----EEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 345678987555555544 88899998764421 111 2221 1 124578999 68877777543
Q ss_pred ----------CCCcEEEEEcc---CCCCCCCCCCCCcccccccccceeeeeeec----------C-CCCCeEEEEECCCC
Q psy15549 149 ----------DESTIIVWKQK---TDQDLPEFPSSNLDEENVNKEHWIVTKILR----------G-HLEDVYDISWSPTS 204 (621)
Q Consensus 149 ----------~dg~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~v~~i~~spd~ 204 (621)
.+..|..+|+. +++.+... .+. + -...+..++..++|
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~-------------------dL~~~~~~~~~~~g~~~~~~nDvavD~~G 148 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSV-------------------NFEKVQDEFEKKAGKRPFGVVQSAQDRDG 148 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEE-------------------ESHHHHHHHHHHHSSCCEEEEEEEECTTS
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEe-------------------cCccccccccccccccccCCceeEECCCC
Confidence 25779999998 66654211 111 1 11347899999999
Q ss_pred CEEEEEeCC-CeEEEEECCCCcEEEEec------cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q psy15549 205 THLISGSVD-NTAIMWDVHKGKNLGILT------EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQ 264 (621)
Q Consensus 205 ~~l~s~~~d-g~i~vwd~~~~~~~~~~~------~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~ 264 (621)
+..++++.. +.|..++.. ++.+..+. ........|+++|+|+.|++....|.|..+|+.
T Consensus 149 naYVt~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 149 NSYVAFALGMPAIARVSAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp CEEEEEEESSCEEEEECTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred CEEEeCCCCCCeEEEEeCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 999999888 888777764 33333221 112236689999999999988779999999987
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.089 Score=55.29 Aligned_cols=146 Identities=12% Similarity=0.047 Sum_probs=84.3
Q ss_pred CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 94 ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
.+|+-+....|+..++..... ....+...-..+..++|++.+..|+.+. ..+.|..+++......
T Consensus 10 ~~~~~~~~~~I~~i~~~~~~~------~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~-------- 75 (619)
T 3s94_A 10 PLLLYANRRDLRLVDATNGKE------NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-------- 75 (619)
T ss_dssp CCEEEECSSBEEEECCC---------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----C--------
T ss_pred ceEEEeccccEEEEeCCCCcc------eEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce--------
Confidence 355566677777777764310 1111222334578999999666666554 4578888887755311
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEE
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s 251 (621)
...+...-.....+++.+.+..|+.+ ...+.|.+.++........+.........|+++|.+.+|+.
T Consensus 76 ------------~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~ 143 (619)
T 3s94_A 76 ------------QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYW 143 (619)
T ss_dssp ------------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEE
T ss_pred ------------EEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEE
Confidence 12222233568899999866555554 45789999998654433333334455778999998766666
Q ss_pred EeC--CCcEEEEEccC
Q psy15549 252 LSS--DRSLRTYSIQS 265 (621)
Q Consensus 252 ~~~--dg~i~iwd~~~ 265 (621)
... .+.|...++..
T Consensus 144 tD~g~~~~I~r~~~dG 159 (619)
T 3s94_A 144 TDWGEVPKIERAGMDG 159 (619)
T ss_dssp EECSSSCEEEEEETTS
T ss_pred eccCCCCEEEEEECCC
Confidence 653 35566666643
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.13 Score=49.81 Aligned_cols=61 Identities=8% Similarity=0.209 Sum_probs=37.2
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEE--EecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAF--IANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
.+.++++....+.|...++..++.... +.......+..+++.|||.++++.. ++.=+||.+
T Consensus 288 ~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td-~~~g~I~ri 350 (353)
T 2g8s_A 288 QQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD-ESSGELLKV 350 (353)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC-STTEEEEEE
T ss_pred CCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe-CCCCEEEEE
Confidence 455666555677888888776543322 2222235799999999998666543 222345554
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.051 Score=52.78 Aligned_cols=114 Identities=9% Similarity=0.049 Sum_probs=56.4
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC--
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-- 92 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd-- 92 (621)
.-+.|+|.|+|+ +|.++...|.|+ +++...... ..............+....|+|+|+
T Consensus 19 ~P~~i~~~pdG~-----~l~V~e~~G~i~--------------~~~~~g~~~-~~~~~~~~v~~~g~~g~~gia~~pdf~ 78 (353)
T 2g8s_A 19 HPWALAFLPDNH-----GMLITLRGGELR--------------HWQAGKGLS-APLSGVPDVWAHGQGGLLDVVLAPDFA 78 (353)
T ss_dssp SEEEEEECSTTC-----CEEEEETTTEEE--------------EEETTTEEC-CCCBSCCCCCCSTTCSEEEEEECTTHH
T ss_pred CcEEEEEcCCCC-----EEEEEeCCceEE--------------EEeCCCcee-eEecCCcccccCCCCCceeEEECCCCC
Confidence 468999999995 477777789888 554321110 0000000011223456789999996
Q ss_pred -CCEEEEE-cC--------CceEEEEeccCccccccceec-cccc---ccCCCeEEEEECCCCCEEEEEe
Q psy15549 93 -GELLASG-DD--------VGKEIWYLTERESGIANVEFA-SDLS---RHQKAVNVVRFSPNGELLASGD 148 (621)
Q Consensus 93 -g~~las~-~d--------~~v~iw~~~~~~~~~~~~~~~-~~~~---~h~~~V~~i~~sp~g~~l~s~s 148 (621)
+..|..+ .. ..|..|+...........+.+ ..+. ........++|.|+|.++++.+
T Consensus 79 ~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 79 QSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp HHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred CCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 4444433 21 234455554332111111111 1111 1111235799999996555543
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.021 Score=55.07 Aligned_cols=194 Identities=15% Similarity=0.206 Sum_probs=110.5
Q ss_pred cEEEEEEccCCCEEEEE-------------cCCceEEEEeccCccccccceeccc-ccccCCCeEEEEECC--CCC-EEE
Q psy15549 83 AVNVVRFSPNGELLASG-------------DDVGKEIWYLTERESGIANVEFASD-LSRHQKAVNVVRFSP--NGE-LLA 145 (621)
Q Consensus 83 ~V~~l~~spdg~~las~-------------~d~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~~i~~sp--~g~-~l~ 145 (621)
..-.++..|+|..++++ .++.|.+++..........+...-. +.........+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 44566678888777776 3667888887643322222221110 222334666777755 454 444
Q ss_pred EE-eC--CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecC-CCCCeEEEEECCCCCEEEEEeC---------
Q psy15549 146 SG-DD--ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRG-HLEDVYDISWSPTSTHLISGSV--------- 212 (621)
Q Consensus 146 s~-s~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~spd~~~l~s~~~--------- 212 (621)
.+ .. +.+|.+|+++....... ....+.+ .-...+.+.+.++|.+.++...
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~-----------------~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~ 193 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLL-----------------HLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKS 193 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEE-----------------EEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHH
T ss_pred EEECCCCCCeEEEEEEECCCCEEE-----------------EEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccccc
Confidence 44 22 56788888776532211 1222332 2346789999999987776541
Q ss_pred --------CCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeC-CCcEEEEEccC-ceeeeecccCCCCCCCc
Q psy15549 213 --------DNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS-DRSLRTYSIQS-KKVISRACRSKLPVDSS 282 (621)
Q Consensus 213 --------dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~-dg~i~iwd~~~-~~~~~~~~~~~~~~~~~ 282 (621)
.|.|..+|. ++. ..+...-.....++|+||++.|+.+.. .+.|..|++.. +..... .
T Consensus 194 ~e~~~~~~~g~vyr~d~--~~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~-~--------- 260 (355)
T 3sre_A 194 WEMHLGLAWSFVTYYSP--NDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPL-R--------- 260 (355)
T ss_dssp HHHHTTCCCEEEEEECT--TCC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE-E---------
T ss_pred chhhccCCccEEEEEEC--CeE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecC-E---------
Confidence 244555554 332 222223344678999999998887764 67899999863 322110 0
Q ss_pred cccccccccccccCCcccceeeeeecC-CCCeEEecc
Q psy15549 283 HELFDKVVPLFHDDTMKSFFRRLTFSP-DGQLLIAPS 318 (621)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~i~~~~~sp-dg~~l~~~s 318 (621)
.+ ........+++.+ +|++.+++.
T Consensus 261 ---------~~---~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 261 ---------VL---SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp ---------EE---ECSSEEEEEEECTTTCCEEEEEE
T ss_pred ---------EE---eCCCCCceEEEeCCCCcEEEEec
Confidence 01 0123457789999 588777543
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.026 Score=54.77 Aligned_cols=163 Identities=15% Similarity=0.141 Sum_probs=98.2
Q ss_pred EccCCCEEEEEcCCceEEEEeccCccccccceecccccc--cCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 89 FSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSR--HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 89 ~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~--h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
.+.+|..|+.+-++.++.-++.... .++.+. +.. --..|..+..+|+|++||..+. ..|.|-.+..+.....
T Consensus 28 ~~~n~t~i~~a~~n~iR~~~i~~~~----~Yk~L~-~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~ 101 (452)
T 3pbp_A 28 SSQNGTRIVFIQDNIIRWYNVLTDS----LYHSLN-FSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVE 101 (452)
T ss_dssp EETTTTEEEEEETTEEEEEETTTCS----SCEEEE-CTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCC
T ss_pred EEcCCCEEEEEECCEEEEEECCCCC----cceEEe-cCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCc
Confidence 4567888888888888887777532 122221 111 1225778999999999999875 5799999884432210
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCC---CCEEEEEeCCCeEEEEECCCCc--EEEEec---------c
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT---STHLISGSVDNTAIMWDVHKGK--NLGILT---------E 232 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd---~~~l~s~~~dg~i~vwd~~~~~--~~~~~~---------~ 232 (621)
- ...........+.+..........|..+.|+|- +..|++-..|+.|++||+.... +. .++ .
T Consensus 102 ~---~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~ 177 (452)
T 3pbp_A 102 D---VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDA 177 (452)
T ss_dssp C---HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCS
T ss_pred c---cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCc
Confidence 0 000000011111111111113678999999994 5689999999999999997521 22 232 1
Q ss_pred CCcceEEEEEcCCCCEEEEEe--CCCcEEEE
Q psy15549 233 HKKFVQGVAWDPKNQYVATLS--SDRSLRTY 261 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~--~dg~i~iw 261 (621)
....|.+++|.+++-.|...+ ..|.|+-.
T Consensus 178 ~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 178 RVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 225678899998776666655 66765543
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.19 Score=48.93 Aligned_cols=250 Identities=11% Similarity=0.122 Sum_probs=152.0
Q ss_pred EEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 86 VVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 86 ~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
+.-.+|..+.||.-....++|+++... ..+..+.- ...|.-=.|-.+. .|+..+ +..|.-|++......
T Consensus 70 sAIMnP~~~iiALrag~~lQiFnle~K-------~klks~~~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P- 138 (494)
T 1bpo_A 70 SAIMNPASKVIALKAGKTLQIFNIEMK-------SKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQP- 138 (494)
T ss_dssp EEEECSSSSCEEEEETTEEEEEETTTT-------EEEEEEEC-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCC-
T ss_pred eeeeCCCCcEEEEecCCeEEEEchHHh-------hhhcceec-CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCc-
Confidence 344788888888877888999999886 33333322 3456666776443 455554 357999999764321
Q ss_pred CCCCCCcccccccccceeeeeeecCC----CCCeEEEEECCCCCEEEEEeC-------CCeEEEEECCCCcEEEEeccCC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGH----LEDVYDISWSPTSTHLISGSV-------DNTAIMWDVHKGKNLGILTEHK 234 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~i~~spd~~~l~s~~~-------dg~i~vwd~~~~~~~~~~~~~~ 234 (621)
.+.+..| ...|..-..+++.++++..+- .|.+.+|..+.+ .-+.+.+|.
T Consensus 139 -------------------~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGha 198 (494)
T 1bpo_A 139 -------------------VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHA 198 (494)
T ss_dssp -------------------EEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSE
T ss_pred -------------------hhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeee
Confidence 2333332 356777888899998775432 478899998655 446778887
Q ss_pred cceEEEEEcCCC---CEEEEEeCC---CcEEEEEccCce-eeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 235 KFVQGVAWDPKN---QYVATLSSD---RSLRTYSIQSKK-VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 235 ~~v~~l~~sp~~---~~l~s~~~d---g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
+....+.+.-+. ..|+.+... +.++|.++.... ... ........+-|
T Consensus 199 a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~--------------------------~f~kk~vdv~f 252 (494)
T 1bpo_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ--------------------------PFPKKAVDVFF 252 (494)
T ss_dssp EEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCC--------------------------CCCCEEEECCC
T ss_pred eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCC--------------------------CccceeeeeeC
Confidence 666554443221 234444432 567777764320 000 00011123334
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
.|+.. .| .-.++.. +..++.++..
T Consensus 253 ppe~~-----------~D-----------------------------FPvamqv----------------s~kygviyvi 276 (494)
T 1bpo_A 253 PPEAQ-----------ND-----------------------------FPVAMQI----------------SEKHDVVFLI 276 (494)
T ss_dssp CTTST-----------TC-----------------------------CEEEEEE----------------ETTTTEEEEE
T ss_pred Ccccc-----------cC-----------------------------ceeEEEe----------------cccCCEEEEE
Confidence 44311 00 0000111 1144677788
Q ss_pred EcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcc
Q psy15549 388 ATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIP 449 (621)
Q Consensus 388 ~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~ 449 (621)
+.-|.|++||+.++.++..-. .....|...+-+....-++.....|.|.--.++...++.-
T Consensus 277 TK~G~i~lyDleTgt~i~~nr-Is~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ivpy 337 (494)
T 1bpo_A 277 TKYGYIHLYDLETGTCIYMNR-ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPY 337 (494)
T ss_dssp ETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHHHH
T ss_pred ecCceEEEEecccceeeeeec-ccCCceEEecccCCCCcEEEEccCceEEEEEEccccchhh
Confidence 889999999999999988764 4566777777766666677777999998888887665443
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.21 Score=47.80 Aligned_cols=111 Identities=19% Similarity=0.146 Sum_probs=64.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC---CC
Q psy15549 129 QKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT---ST 205 (621)
Q Consensus 129 ~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd---~~ 205 (621)
-...+.|+|.|+|.++++--..|.|++++...+... .+. .+.............|+++|+ +.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~-~v~--------------~~~~v~~~g~~GllGia~~Pdf~~~g 95 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKT-ELG--------------EVPGVSPSGEGGLLGIALSPDYASDH 95 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEE--------------ECTTCCCBTTBSEEEEEECTTHHHHC
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEe-eec--------------ccCceeecCCCCceeeEeccccccCC
Confidence 345789999999997777665899999876544321 000 000111233556899999995 34
Q ss_pred EEEEE---eCCCeEEEEECCCC----------cEEE-Eec-cCCcceEEEEEcCCCCEEEEEeC
Q psy15549 206 HLISG---SVDNTAIMWDVHKG----------KNLG-ILT-EHKKFVQGVAWDPKNQYVATLSS 254 (621)
Q Consensus 206 ~l~s~---~~dg~i~vwd~~~~----------~~~~-~~~-~~~~~v~~l~~sp~~~~l~s~~~ 254 (621)
.|... ..++.|.-|.+..+ +.+. .+. ........|.|.|||.+.++.+.
T Consensus 96 ~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 96 MVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred EEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 44433 23456666665541 1111 121 11223457999999987776543
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.044 Score=53.23 Aligned_cols=124 Identities=18% Similarity=0.174 Sum_probs=79.3
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccc------cceeccccc------ccCCCeEEEEECC---CCCEEEEE
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIA------NVEFASDLS------RHQKAVNVVRFSP---NGELLASG 147 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~------~~~~~~~~~------~h~~~V~~i~~sp---~g~~l~s~ 147 (621)
.|..+..||+|++||..++.+|.|..+..+..... .+. ...+. ....+|..+.|+| .+..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q-~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQ-IFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTE-EEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccc-eeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 57779999999999999999999999985432111 011 01111 1356799999999 45689999
Q ss_pred eCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe--CCCeEEE
Q psy15549 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS--VDNTAIM 218 (621)
Q Consensus 148 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~--~dg~i~v 218 (621)
..|+.|++||+........ ..+... ...........|.+++|.+++-.|...+ ..|.|+-
T Consensus 146 tsD~~Ir~yDl~~s~~~P~---------~L~k~~--~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI---------VLNKPN--NSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE---------EESCCC--SEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred ecCCEEEEEEcccCCCCCc---------chhccc--cccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 9999999999987332211 000000 0012233447788999998765555544 5565543
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.43 Score=47.89 Aligned_cols=110 Identities=9% Similarity=0.145 Sum_probs=61.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeee--cCCCCCeEEEEECCC---C
Q psy15549 130 KAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL--RGHLEDVYDISWSPT---S 204 (621)
Q Consensus 130 ~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~spd---~ 204 (621)
...+.|+|.|+|+++++-...+.|++++..++... .+. .+...+ .........|+|+|+ +
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~-~~~--------------~~~~~~~~~~g~~Gllgia~~Pdf~~~ 91 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVK-TVF--------------QVPEIVNDADGQNGLLGFAFHPDFKNN 91 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEE--------------ECTTCCCCTTSSCSEEEEEECTTTTTS
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEe-EEe--------------cCCccccccCCCCceeEEEECCCcCcC
Confidence 35679999999987776554457888875443311 000 000001 013466889999995 5
Q ss_pred CEEEEEeC-------------CCeEEEEECCCC-------cEEE-Eec-cCCcceEEEEEcCCCCEEEEEeC
Q psy15549 205 THLISGSV-------------DNTAIMWDVHKG-------KNLG-ILT-EHKKFVQGVAWDPKNQYVATLSS 254 (621)
Q Consensus 205 ~~l~s~~~-------------dg~i~vwd~~~~-------~~~~-~~~-~~~~~v~~l~~sp~~~~l~s~~~ 254 (621)
..|..+.. ...|.-|++..+ +.+. .+. ........|+|.|||.+.++.+.
T Consensus 92 g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 92 PYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 55554432 235655655332 1111 121 12234688999999987776554
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.33 Score=46.42 Aligned_cols=118 Identities=9% Similarity=0.029 Sum_probs=62.7
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeec-cccccccCcEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFA-SDLSRHQKAVNV 86 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~-~~~~~h~~~V~~ 86 (621)
+....-..-+.|+|.|||. ++++--..|.|+ +++...+... .+... ..+.........
T Consensus 26 ~va~gL~~P~~ia~~pdG~-----llVter~~G~I~--------------~v~~~~g~~~--~v~~~~~v~~~g~~GllG 84 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGD-----LLVSSRDEATIT--------------RVDAKTGRKT--ELGEVPGVSPSGEGGLLG 84 (347)
T ss_dssp EEECCCSSEEEEEECTTSC-----EEEEETTTCEEE--------------EECTTTCCEE--EEEECTTCCCBTTBSEEE
T ss_pred EeecCCCCceEEEEcCCCc-----EEEEEecCCEEE--------------EEECCCCcEe--eecccCceeecCCCCcee
Confidence 3333344678999999997 777776688888 5543322211 01101 112334567899
Q ss_pred EEEccC----CCEEEEE---cCCceEEEEeccCc---ccccccee-cccc---cccCCCeEEEEECCCCCEEEEEe
Q psy15549 87 VRFSPN----GELLASG---DDVGKEIWYLTERE---SGIANVEF-ASDL---SRHQKAVNVVRFSPNGELLASGD 148 (621)
Q Consensus 87 l~~spd----g~~las~---~d~~v~iw~~~~~~---~~~~~~~~-~~~~---~~h~~~V~~i~~sp~g~~l~s~s 148 (621)
|+|+|+ +.+.++- .++.|.-|...... ......+. +..+ ..| .-..|+|.|||.++++.+
T Consensus 85 ia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 85 IALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECTTSCEEEECB
T ss_pred eEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCCCCCEEEEEC
Confidence 999995 4444432 23444444444321 01111111 1111 224 345799999998777754
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=96.68 E-value=1.3 Score=50.22 Aligned_cols=60 Identities=10% Similarity=0.256 Sum_probs=36.6
Q ss_pred cEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 382 RIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 382 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
++++++ -...|++|++...+.+. ....+...|..+.....|.+++.|..-..|.++.++.
T Consensus 896 g~Lla~-ig~~l~vy~l~~~~~L~-~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~ 955 (1158)
T 3ei3_A 896 GKLLAS-INSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKP 955 (1158)
T ss_dssp TEEEEE-ETTEEEEEEECTTSCEE-EEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEET
T ss_pred CEEEEE-cCCEEEEEECCCCceEE-EEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEc
Confidence 344443 45789999998766444 2111222233333333578999998888888887763
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.039 Score=48.32 Aligned_cols=69 Identities=19% Similarity=0.098 Sum_probs=41.6
Q ss_pred EEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy15549 84 VNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIV 155 (621)
Q Consensus 84 V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~v 155 (621)
-.++.|.|+|.+.++ +|+.|.-++-.+.+.......-...-.+.-..+..|.|.|+|.+.+.. |+.+.-
T Consensus 90 F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp CSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred ceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 478899999999999 777665555433322111111011111122467999999999877776 777543
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.18 Score=47.51 Aligned_cols=64 Identities=9% Similarity=0.127 Sum_probs=37.0
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCc---EEEE--eccCCcceEEEEEcCCCCEEEEEeCC-----CcEEEEEccCce
Q psy15549 203 TSTHLISGSVD-----NTAIMWDVHKGK---NLGI--LTEHKKFVQGVAWDPKNQYVATLSSD-----RSLRTYSIQSKK 267 (621)
Q Consensus 203 d~~~l~s~~~d-----g~i~vwd~~~~~---~~~~--~~~~~~~v~~l~~sp~~~~l~s~~~d-----g~i~iwd~~~~~ 267 (621)
++.+++.|+.+ ..+.+||+.+.+ -... +.........+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 56677777754 468999998765 2222 2111111222222 56677777654 358889987765
Q ss_pred e
Q psy15549 268 V 268 (621)
Q Consensus 268 ~ 268 (621)
-
T Consensus 140 W 140 (301)
T 2vpj_A 140 W 140 (301)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=96.43 E-value=1.8 Score=49.00 Aligned_cols=74 Identities=15% Similarity=0.170 Sum_probs=45.9
Q ss_pred cCcEEEEEEccC------CCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEEC--CCCCEEEEEeCC
Q psy15549 81 QKAVNVVRFSPN------GELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFS--PNGELLASGDDE 150 (621)
Q Consensus 81 ~~~V~~l~~spd------g~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s--p~g~~l~s~s~d 150 (621)
...|.|+++.|. +.++|.|. |+.++|+++...+. .....+.. .....++.+. ....+|..|-.|
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~-----~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~d 626 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFEL-----LHKEMLGG-EIIPRSILMTTFESSHYLLCALGD 626 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCE-----EEEEECCS-SCCEEEEEEEEETTEEEEEEEETT
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCe-----EEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCC
Confidence 457999999863 46888887 78899999975321 11112211 1223333332 233578889999
Q ss_pred CcEEEEEccC
Q psy15549 151 STIIVWKQKT 160 (621)
Q Consensus 151 g~i~vwd~~~ 160 (621)
|.+..+.++.
T Consensus 627 G~l~~~~~d~ 636 (1158)
T 3ei3_A 627 GALFYFGLNI 636 (1158)
T ss_dssp SEEEEEEECT
T ss_pred CeEEEEEEcC
Confidence 9887776543
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.34 Score=45.53 Aligned_cols=146 Identities=12% Similarity=0.196 Sum_probs=74.0
Q ss_pred CCCEEEEEc-C-----CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC-----CcEEEEEccC
Q psy15549 92 NGELLASGD-D-----VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE-----STIIVWKQKT 160 (621)
Q Consensus 92 dg~~las~~-d-----~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d-----g~i~vwd~~~ 160 (621)
++++++.|+ + ..+.+||...... ..+..+......-.++.+ ++++++.|+.+ ..+.+||+.+
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W-----~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQW-----SMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEE-----EEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeE-----EECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCC
Confidence 567777765 2 2356677665532 222222111111222222 66777777654 3577777766
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcEEEEe--ccC
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD-----NTAIMWDVHKGKNLGIL--TEH 233 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d-----g~i~vwd~~~~~~~~~~--~~~ 233 (621)
.. |.....+........++.+ ++++++.|+.+ ..+.+||+.+.+-...- ...
T Consensus 185 ~~-------------------W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 185 GH-------------------WTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp TE-------------------EEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred Cc-------------------EEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc
Confidence 53 2222222211112223333 56677777764 46899999876543321 111
Q ss_pred CcceEEEEEcCCCCEEEEEeCC-----CcEEEEEccCce
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSD-----RSLRTYSIQSKK 267 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~d-----g~i~iwd~~~~~ 267 (621)
......+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 244 r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 244 RCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred ccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 111222222 56777777765 357888887654
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.76 Score=43.22 Aligned_cols=145 Identities=8% Similarity=-0.038 Sum_probs=73.1
Q ss_pred CEEEEEc---CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC----CcEEEEEccCCCCCCC
Q psy15549 94 ELLASGD---DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE----STIIVWKQKTDQDLPE 166 (621)
Q Consensus 94 ~~las~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d----g~i~vwd~~~~~~~~~ 166 (621)
.+++.|+ .+.+.+||...... ..+..+......-..+.+ ++.+++.|+.+ ..+.+||..+..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W-----~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~---- 81 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSW-----TDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDS---- 81 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEE-----EECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTE----
T ss_pred eEEEEeCCCCCceEEEecCCCCCE-----ecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCe----
Confidence 3445555 34577777776532 222222222222222222 56677777754 467778776653
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC------CeEEEEECCCCcEEEEe--ccCCcceE
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD------NTAIMWDVHKGKNLGIL--TEHKKFVQ 238 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d------g~i~vwd~~~~~~~~~~--~~~~~~v~ 238 (621)
|.....+........++.+ ++++++.|+.+ ..+.+||+.+.+-...- ........
T Consensus 82 ---------------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 144 (306)
T 3ii7_A 82 ---------------WYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHG 144 (306)
T ss_dssp ---------------EEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred ---------------EEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeE
Confidence 2222222222222222333 56677777754 46889999876533221 11111112
Q ss_pred EEEEcCCCCEEEEEeC---------CCcEEEEEccCcee
Q psy15549 239 GVAWDPKNQYVATLSS---------DRSLRTYSIQSKKV 268 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~---------dg~i~iwd~~~~~~ 268 (621)
.+. -+++.++.|+. -..+.+||+.+.+-
T Consensus 145 ~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 145 MVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW 181 (306)
T ss_dssp EEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEE
T ss_pred EEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeE
Confidence 222 25666666654 34588999887654
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.48 Score=44.65 Aligned_cols=64 Identities=11% Similarity=0.098 Sum_probs=38.4
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCcEEEE--eccCCcceEEEEEcCCCCEEEEEeCC------CcEEEEEccCcee
Q psy15549 203 TSTHLISGSVD----NTAIMWDVHKGKNLGI--LTEHKKFVQGVAWDPKNQYVATLSSD------RSLRTYSIQSKKV 268 (621)
Q Consensus 203 d~~~l~s~~~d----g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~~~~l~s~~~d------g~i~iwd~~~~~~ 268 (621)
++.+++.|+.+ ..+.+||+.+.+-... +.........+.+ +++.++.|+.+ ..+.+||..+.+-
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 56677777754 6788999987653322 2111111222222 56777777765 4588999887654
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=96.24 E-value=0.072 Score=53.43 Aligned_cols=122 Identities=12% Similarity=0.092 Sum_probs=71.5
Q ss_pred ccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccc----ccCcEE--EEEEc---cCC
Q psy15549 23 LKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSR----HQKAVN--VVRFS---PNG 93 (621)
Q Consensus 23 pd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~----h~~~V~--~l~~s---pdg 93 (621)
|-|+.|.++.+.+|+..|.|+||=+.+.+.+..|-+++......--..-+....|.. ..+... .+.+. .||
T Consensus 63 ~pG~~Deyy~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDG 142 (638)
T 3sbq_A 63 GPGELDDYYGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDG 142 (638)
T ss_dssp CTTCCCSEEEEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEE
T ss_pred CCCCcccEEEEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeee
Confidence 447778889999999999999999998888877777766532211000001111110 011122 22332 378
Q ss_pred CEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEEC--CCCCEEEEEeCC
Q psy15549 94 ELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFS--PNGELLASGDDE 150 (621)
Q Consensus 94 ~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s--p~g~~l~s~s~d 150 (621)
++|..-. ...|...++..-+. ..+..+ .....+..++|- |+..|++.+++.
T Consensus 143 rylfiNdkan~RvAri~l~~~~~-----d~Ii~i-Pn~~~~Hg~~~~~~p~T~yv~~~~e~ 197 (638)
T 3sbq_A 143 KYLFINDKANSRVARIRLDIMKC-----DKMITV-PNVQAIHGLRLQKVPHTKYVFANAEF 197 (638)
T ss_dssp EEEEEEETTTTEEEEEETTTTEE-----EEEEEC-TTCSCEEEEEECCSSBCCEEEEEECS
T ss_pred EEEEEecCCCcceEEEECCcEee-----ceeEeC-CCCcCcccccccccCCccEEEeccee
Confidence 8999887 34455555554421 111111 234567888886 677888888754
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.76 Score=43.13 Aligned_cols=107 Identities=13% Similarity=0.183 Sum_probs=55.7
Q ss_pred CCCEEEEEeCCC-----cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC
Q psy15549 140 NGELLASGDDES-----TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN 214 (621)
Q Consensus 140 ~g~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg 214 (621)
++.+++.|+.++ .+.+||..+.+ |.....+........++.+ ++.+++.|+.++
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~-------------------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 119 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQ-------------------WTSVANMRDRRSTLGAAVL--NGLLYAVGGFDG 119 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTE-------------------EEEECCCSSCCBSCEEEEE--TTEEEEEEEECS
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCc-------------------eeeCCCCCccccceEEEEE--CCEEEEEcCCCC
Confidence 566777777543 47777776553 2222222222222222333 566777777553
Q ss_pred -----eEEEEECCCCcEEEE--eccCCcceEEEEEcCCCCEEEEEeCC-------CcEEEEEccCceee
Q psy15549 215 -----TAIMWDVHKGKNLGI--LTEHKKFVQGVAWDPKNQYVATLSSD-------RSLRTYSIQSKKVI 269 (621)
Q Consensus 215 -----~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~~~~l~s~~~d-------g~i~iwd~~~~~~~ 269 (621)
.+.+||+.+.+-... +.........+.+ +++.++.|+.+ ..+.+||+.+.+-.
T Consensus 120 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 120 STGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp SCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred CccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 578889877653322 1111111122222 46666666543 35888998876543
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.34 Score=45.58 Aligned_cols=64 Identities=13% Similarity=0.082 Sum_probs=37.5
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEe--ccCCcceEEEEEcCCCCEEEEEeCCC-----cEEEEEccCcee
Q psy15549 203 TSTHLISGSVD-----NTAIMWDVHKGKNLGIL--TEHKKFVQGVAWDPKNQYVATLSSDR-----SLRTYSIQSKKV 268 (621)
Q Consensus 203 d~~~l~s~~~d-----g~i~vwd~~~~~~~~~~--~~~~~~v~~l~~sp~~~~l~s~~~dg-----~i~iwd~~~~~~ 268 (621)
++++++.|+.+ ..+.+||+.+.+-...- .........+. -+++.++.|+.++ .+.+||+.+.+-
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 56777777654 46899999876533221 11111111222 2567777777653 488999887653
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.85 Score=42.80 Aligned_cols=139 Identities=9% Similarity=0.084 Sum_probs=79.4
Q ss_pred EccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC--------------CcE
Q psy15549 89 FSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE--------------STI 153 (621)
Q Consensus 89 ~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d--------------g~i 153 (621)
|+.+|.+|.... .+.-.||.+...+.. ...+... .+--++++|.+|+.+... ..|
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~------~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~I 90 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSN------IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSL 90 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCS------CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCC------CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeE
Confidence 346777777664 223467777654432 2222211 133457889988877643 356
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe--C--CCeEEEEECCCCcEEEE
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS--V--DNTAIMWDVHKGKNLGI 229 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~--~--dg~i~vwd~~~~~~~~~ 229 (621)
+..+++.... ..+.... +..|++++++|+-.. . ...|...++.... ...
T Consensus 91 y~i~~dg~~~----------------------~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~ 143 (302)
T 3s25_A 91 CRIKRNGHGS----------------------TVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKK 143 (302)
T ss_dssp EEEETTSCCC----------------------EEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEE
T ss_pred EEEeCCCCcc----------------------eEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEE
Confidence 6667666542 1122111 236777888888776 2 3456666665333 344
Q ss_pred eccCCcceEEEEEcCCCCEEEEEeC-CCcEEEEEccCcee
Q psy15549 230 LTEHKKFVQGVAWDPKNQYVATLSS-DRSLRTYSIQSKKV 268 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp~~~~l~s~~~-dg~i~iwd~~~~~~ 268 (621)
+..+.. ..|+++++.|+..+. ...|...++..+..
T Consensus 144 lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~ 179 (302)
T 3s25_A 144 IKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSE 179 (302)
T ss_dssp EESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEE
T ss_pred EeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCE
Confidence 433332 456788998887765 56777778766543
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=96.06 E-value=1 Score=50.93 Aligned_cols=250 Identities=11% Similarity=0.112 Sum_probs=142.0
Q ss_pred EEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 87 VRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 87 l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
.-.+|..+.||.-....++|+++... ..+..+.- ...|.-=.|-.+. .|+..+ +..|.-|++......
T Consensus 71 AIMnP~~~iiALrag~~lQiFnl~~k-------~klks~~~-~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P-- 138 (1630)
T 1xi4_A 71 AIMNPASKVIALKAGKTLQIFNIEMK-------SKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQP-- 138 (1630)
T ss_pred hccCCCcceEEEecCCeEEEeehHHh-------hhhccccc-CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCcc--
Confidence 34688888888877888999999876 22333222 3456666776544 344444 346999999753221
Q ss_pred CCCCCcccccccccceeeeeeecCC----CCCeEEEEECCCCCEEEEEe-------CCCeEEEEECCCCcEEEEeccCCc
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGH----LEDVYDISWSPTSTHLISGS-------VDNTAIMWDVHKGKNLGILTEHKK 235 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~i~~spd~~~l~s~~-------~dg~i~vwd~~~~~~~~~~~~~~~ 235 (621)
.+.+..| ...|..-..+++.++++..+ -.|.+.+|..+.+ .-+.+.+|.+
T Consensus 139 ------------------~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~ 199 (1630)
T 1xi4_A 139 ------------------VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAA 199 (1630)
T ss_pred ------------------HHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHh
Confidence 1222222 45677777888888877543 3588999998654 3355667766
Q ss_pred ceEEEEEcC---CCCEEEEEeC---CCcEEEEEccCc-eeeeecccCCCCCCCccccccccccccccCCcccceeeeeec
Q psy15549 236 FVQGVAWDP---KNQYVATLSS---DRSLRTYSIQSK-KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 236 ~v~~l~~sp---~~~~l~s~~~---dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 308 (621)
....+.... ....++.+.. .+.++|-++... .....+ ......+-|.
T Consensus 200 ~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f--------------------------~kk~~~~~~~ 253 (1630)
T 1xi4_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF--------------------------PKKAVDVFFP 253 (1630)
T ss_pred hhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCC--------------------------ccccccccCC
Confidence 554444321 1223333322 256777766432 000000 0011223333
Q ss_pred CCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE
Q psy15549 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA 388 (621)
Q Consensus 309 pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (621)
|+.. .|- -.++. .+...+.+...+
T Consensus 254 ~~~~-----------~Df-----------------------------pv~~~----------------vs~k~g~iy~it 277 (1630)
T 1xi4_A 254 PEAQ-----------NDF-----------------------------PVAMQ----------------ISEKHDVVFLIT 277 (1630)
T ss_pred cccc-----------cCc-----------------------------ceEEE----------------eccccCEEEEEe
Confidence 3310 000 00000 111346777888
Q ss_pred cCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCccc
Q psy15549 389 TENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPY 450 (621)
Q Consensus 389 ~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~ 450 (621)
.-|.|++||+.++.++..-. ....+|...+-+....-++.....|.|.--.++...++.-+
T Consensus 278 k~G~~~~~d~~t~~~i~~~r-is~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~yi 338 (1630)
T 1xi4_A 278 KYGYIHLYDLETGTCIYMNR-ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYI 338 (1630)
T ss_pred cCceEEEEecccchhhhhcc-ccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhhhhH
Confidence 89999999999998877653 34556666665554444555568888888888776655433
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.11 Score=45.58 Aligned_cols=154 Identities=12% Similarity=0.067 Sum_probs=82.9
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccc--cCCCeEEEEECCCCCEEEEEeCCCcEEEEEccC
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSR--HQKAVNVVRFSPNGELLASGDDESTIIVWKQKT 160 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~--h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~ 160 (621)
.+..++|+|+|.+.++ .++. +|...........+--..+..+ .-..-.++.|.|+|.+.++ .||.|.-++-.+
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~--Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDK--IYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTE--EEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE-eCCe--EEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 6779999999998777 5554 6665543211111000000000 0011468899999987777 569888776533
Q ss_pred CCCCCCCCCCCcccccccccceeee--eeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCc------EEEEe-c
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVT--KILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK------NLGIL-T 231 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~------~~~~~-~ 231 (621)
.... .|.-. ..-..-=..+..|.|.|+|.+.++. |+.++-+...++. ....+ .
T Consensus 117 ~~~~----------------~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~ 178 (236)
T 1tl2_A 117 SDTD----------------NWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQ 178 (236)
T ss_dssp STTC----------------CHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEES
T ss_pred CCCC----------------ceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceecc
Confidence 2211 12111 1111122467999999999877766 7775433222111 01111 1
Q ss_pred cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15549 232 EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSI 263 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~ 263 (621)
..-...+.+.|.+++...++. +| ++|-.
T Consensus 179 ~g~~~yr~l~f~~~G~l~~v~--~g--~~Y~~ 206 (236)
T 1tl2_A 179 GGWDTFKFLFFSSVGTLFGVQ--GG--KFYED 206 (236)
T ss_dssp SSGGGEEEEEECTTSCEEEEE--TT--EEEEE
T ss_pred CCcceEEEEEECCCCcEEEEe--CC--eEEec
Confidence 222334557788888877655 66 44443
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.99 E-value=1 Score=42.50 Aligned_cols=102 Identities=11% Similarity=0.107 Sum_probs=52.8
Q ss_pred EEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-----C----
Q psy15549 143 LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-----D---- 213 (621)
Q Consensus 143 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-----d---- 213 (621)
+++.|+ ..+.+||..+++ |.. ..+..............++.+++.|+. .
T Consensus 7 l~~~GG--~~~~~yd~~~~~-------------------W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 64 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANE-------------------CYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDP 64 (315)
T ss_dssp EEEEET--TEEEEEETTTTE-------------------EEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSC
T ss_pred EEEEcC--CceEEECCCCCe-------------------Eec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccc
Confidence 344555 468889887765 222 122212122233333457778888873 1
Q ss_pred --CeEEEEECCCCcEEEE--eccCCcceEEEEEcCCCCEEEEEeCC--------CcEEEEEccCcee
Q psy15549 214 --NTAIMWDVHKGKNLGI--LTEHKKFVQGVAWDPKNQYVATLSSD--------RSLRTYSIQSKKV 268 (621)
Q Consensus 214 --g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~~~~l~s~~~d--------g~i~iwd~~~~~~ 268 (621)
..+.+||..+.+-... +.........+.+ ++..++.|+.+ ..+.+||..+.+-
T Consensus 65 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W 129 (315)
T 4asc_A 65 MSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKW 129 (315)
T ss_dssp EEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEE
T ss_pred cccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcE
Confidence 1277889877653221 1111111112222 46666666632 4588999887653
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.71 Score=43.53 Aligned_cols=147 Identities=14% Similarity=0.158 Sum_probs=75.1
Q ss_pred CCCEEEEEc-C-----CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC-----CcEEEEEccC
Q psy15549 92 NGELLASGD-D-----VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE-----STIIVWKQKT 160 (621)
Q Consensus 92 dg~~las~~-d-----~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d-----g~i~vwd~~~ 160 (621)
++++++.|+ + ..+.+||...... ..+..+......-.++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-----~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEW-----HLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEE-----EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeE-----eECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCC
Confidence 667777765 2 3467777766532 222222221222222333 56677777654 3577788765
Q ss_pred CCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--eccC
Q psy15549 161 DQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD-----NTAIMWDVHKGKNLGI--LTEH 233 (621)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~~ 233 (621)
.. |.....+........++.+ ++++++.|+.+ ..+.+||+.+.+-... +...
T Consensus 194 ~~-------------------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 252 (308)
T 1zgk_A 194 NE-------------------WRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR 252 (308)
T ss_dssp TE-------------------EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSC
T ss_pred Ce-------------------EeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCC
Confidence 53 2222211111122223333 56677777654 5689999987653322 1111
Q ss_pred CcceEEEEEcCCCCEEEEEeCC-----CcEEEEEccCcee
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSD-----RSLRTYSIQSKKV 268 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~d-----g~i~iwd~~~~~~ 268 (621)
......+.+ +++.++.|+.+ ..+.+||+.+.+-
T Consensus 253 r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 253 RSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred ccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 111122222 56777777754 3578888877653
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.8 Score=42.99 Aligned_cols=140 Identities=7% Similarity=0.072 Sum_probs=78.6
Q ss_pred EEEccCCCEEEEEcC-C------------ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe--CCC
Q psy15549 87 VRFSPNGELLASGDD-V------------GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD--DES 151 (621)
Q Consensus 87 l~~spdg~~las~~d-~------------~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s--~dg 151 (621)
--++++|.+|+.+.. . .-.|+.+...+... .. +.. .. +..|++++++|+... .++
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~---~~---l~~--~~--~~~~s~~g~~Iy~~~~~~~~ 127 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS---TV---LDP--DP--CIYASLIGNYIYYLHYDTQT 127 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC---EE---EEC--SC--EEEEEEETTEEEEEEESSSS
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc---eE---eec--CC--ccEEEEeCCEEEEEeecCCC
Confidence 346889999988762 2 33555555443211 11 111 11 236778888888776 344
Q ss_pred --cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEE
Q psy15549 152 --TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLG 228 (621)
Q Consensus 152 --~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~ 228 (621)
.|...+++.... ..+..+.. ..|+++++.|+-.+. ...|.+.++..+....
T Consensus 128 ~~~Iy~~~~dGs~~----------------------~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~ 181 (302)
T 3s25_A 128 ATSLYRIRIDGEEK----------------------KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL 181 (302)
T ss_dssp CEEEEEEETTSCCC----------------------EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE
T ss_pred CceEEEEECCCCCe----------------------EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE
Confidence 455555553331 22333322 346778888886665 5788888887665443
Q ss_pred EeccCCcceEEEEEcCCCCEEEEEeCCC--cEEEEEccCc
Q psy15549 229 ILTEHKKFVQGVAWDPKNQYVATLSSDR--SLRTYSIQSK 266 (621)
Q Consensus 229 ~~~~~~~~v~~l~~sp~~~~l~s~~~dg--~i~iwd~~~~ 266 (621)
.+.+ ... ..++|++.+|+.....+ .|..-++...
T Consensus 182 l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 182 FYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp EECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC
T ss_pred EeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCC
Confidence 3332 222 23569999988766543 4555555443
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=95.48 E-value=0.63 Score=52.57 Aligned_cols=178 Identities=11% Similarity=0.114 Sum_probs=108.8
Q ss_pred eEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceeccccccc----CCCeE
Q psy15549 58 IWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRH----QKAVN 133 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h----~~~V~ 133 (621)
|+++.+...... +. ....|..-.|-. .+.|+..++..|.-|++.... .+...+..| ...|.
T Consensus 90 iFnl~~k~klks-------~~-~~e~VvfWkWis-~~~l~lVT~~aVyHW~~~~~s------~P~k~fdR~~~L~~~QIi 154 (1630)
T 1xi4_A 90 IFNIEMKSKMKA-------HT-MTDDVTFWKWIS-LNTVALVTDNAVYHWSMEGES------QPVKMFDRHSSLAGCQII 154 (1630)
T ss_pred EeehHHhhhhcc-------cc-cCCCceEEEecC-CCeeEEEcCCeEEEeccCCCC------ccHHHHhcchhcccCeeE
Confidence 777776654322 11 123566656653 456777778899999997643 333333333 35677
Q ss_pred EEEECCCCCEEEEEe-------CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC---C
Q psy15549 134 VVRFSPNGELLASGD-------DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP---T 203 (621)
Q Consensus 134 ~i~~sp~g~~l~s~s-------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp---d 203 (621)
.-..+++.++++..| -.|.+.+|.++.+.. +.+.||.+....+.... .
T Consensus 155 nY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s----------------------Q~iegha~~F~~~~~~~~~~~ 212 (1630)
T 1xi4_A 155 NYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----------------------QPIEGHAASFAQFKMEGNAEE 212 (1630)
T ss_pred EeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc----------------------hhhhHhHhhhheeccCCCCCC
Confidence 778888999877544 357888998876643 45566766554444421 1
Q ss_pred CCEEEEEeC---CCeEEEEECCCC---cEE------EEecc---CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCcee
Q psy15549 204 STHLISGSV---DNTAIMWDVHKG---KNL------GILTE---HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV 268 (621)
Q Consensus 204 ~~~l~s~~~---dg~i~vwd~~~~---~~~------~~~~~---~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 268 (621)
..+++.+.. .+.++|.++... ... ..+.. ...-..++..++.-..+...+.-|.|.+||+.++.+
T Consensus 213 ~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 213 STLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (1630)
T ss_pred ceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchh
Confidence 223333322 368899888543 111 11111 122234677777777788889999999999999988
Q ss_pred eeec
Q psy15549 269 ISRA 272 (621)
Q Consensus 269 ~~~~ 272 (621)
+..-
T Consensus 293 i~~~ 296 (1630)
T 1xi4_A 293 IYMN 296 (1630)
T ss_pred hhhc
Confidence 7654
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=95.46 E-value=3.6 Score=44.46 Aligned_cols=199 Identities=10% Similarity=0.060 Sum_probs=107.8
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
..|.++....++ .|..|+.+|. . .+|..+..-.. ........|.++.. .+|
T Consensus 63 ~~i~~i~~d~~g------~lWigT~~Gl-~--------------~yd~~~~~f~~-------~~~~~~~~i~~i~~-~~g 113 (758)
T 3ott_A 63 TRIYCGVIIDNT------YLYMGTDNGI-L--------------VYNYRADRYEQ-------PETDFPTDVRTMAL-QGD 113 (758)
T ss_dssp SCEEEEEEETTT------EEEEEETTEE-E--------------EEETTTTEECC-------CSCCCCSCEEEEEE-ETT
T ss_pred ceEEEEEEcCCC------cEEEEeCCCe-E--------------EEeCCCCEEEC-------cccCCCceEEEEEe-cCC
Confidence 358888777776 6666776764 4 45543321110 00111235777654 455
Q ss_pred CEEEEEcCCceEEEEeccCccccccceecccc--cccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 94 ELLASGDDVGKEIWYLTERESGIANVEFASDL--SRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
. |..++.+++..++...... ...... .-....|.++....+|.+.+ |+..| |..++..+.... .+..
T Consensus 114 ~-lWigt~~Gl~~~~~~~~~~-----~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~-~~~~-- 182 (758)
T 3ott_A 114 T-LWLGALNGLYTYQLQSRKL-----TSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFE-GIPL-- 182 (758)
T ss_dssp E-EEEEETTEEEEEETTTCCE-----EEECHHHHCCSCSCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEE-EECC--
T ss_pred c-EEEEcCCcceeEeCCCCeE-----EEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceE-EecC--
Confidence 4 4445555888888654321 111000 01234688888887887555 44444 777876654311 0000
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEE
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s 251 (621)
..........|.++...+++..|..|+. +-+..+|..+++...........|.++....+|.+.+
T Consensus 183 -------------~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi- 247 (758)
T 3ott_A 183 -------------PVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA- 247 (758)
T ss_dssp -------------CCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-
T ss_pred -------------CCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-
Confidence 0000011234888888777765555664 4588899877654322111234588888888887655
Q ss_pred EeCCCcEEEEEccCcee
Q psy15549 252 LSSDRSLRTYSIQSKKV 268 (621)
Q Consensus 252 ~~~dg~i~iwd~~~~~~ 268 (621)
|+.+ -+.+++..++..
T Consensus 248 gT~~-Gl~~~~~~~~~~ 263 (758)
T 3ott_A 248 GTDN-GLYVYHNDTTPL 263 (758)
T ss_dssp EETT-EEEEECCTTSCC
T ss_pred EeCC-ceeEEecCCCcE
Confidence 4544 477888766543
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.29 E-value=1.6 Score=41.14 Aligned_cols=147 Identities=10% Similarity=0.062 Sum_probs=73.2
Q ss_pred CCCEEEEEc-C--------CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-C-----CcEEEE
Q psy15549 92 NGELLASGD-D--------VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-E-----STIIVW 156 (621)
Q Consensus 92 dg~~las~~-d--------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-d-----g~i~vw 156 (621)
++++++.|+ + +.+.+||...... ..+..+......-.++. -++++++.|+. + ..+.+|
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W-----~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~y 170 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKW-----GESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVY 170 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEE-----EECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcE-----eECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEE
Confidence 566666665 2 2367777765532 22222222111222222 35667777765 2 357788
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC-----eEEEEECCCCcEEEEec
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN-----TAIMWDVHKGKNLGILT 231 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~ 231 (621)
|+.+.. |.....+........++.+ ++++++.|+.++ .+.+||+.+.+-...-.
T Consensus 171 d~~~~~-------------------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 229 (315)
T 4asc_A 171 DPKKFE-------------------WKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA 229 (315)
T ss_dssp ETTTTE-------------------EEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC
T ss_pred eCCCCe-------------------EEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCC
Confidence 876653 2222211111111222333 567777777654 58899998764332211
Q ss_pred --cCCcceEEEEEcCCCCEEEEEeCCC--------------cEEEEEccCcee
Q psy15549 232 --EHKKFVQGVAWDPKNQYVATLSSDR--------------SLRTYSIQSKKV 268 (621)
Q Consensus 232 --~~~~~v~~l~~sp~~~~l~s~~~dg--------------~i~iwd~~~~~~ 268 (621)
........+.+ +++.++.|+.++ .+.+||+.+.+-
T Consensus 230 ~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 230 FPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp CSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred CCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 11111222222 467777777532 367788877653
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=95.14 E-value=1.3 Score=44.36 Aligned_cols=54 Identities=15% Similarity=0.214 Sum_probs=31.4
Q ss_pred cEEEEEEcCCcEEEEeCCC-Ccee----EEEecccccceEEEEEcCCCC-eEEEEeCCCcE
Q psy15549 382 RIVIAVATENNILLYDTQH-ASPF----AFIANIHYTKLTDITWSSDGK-VLIASSTDGYC 436 (621)
Q Consensus 382 ~~l~~~~~dg~i~iwd~~~-~~~~----~~~~~~h~~~v~~~~~spdg~-~l~s~s~dg~i 436 (621)
..+++.-..+.|....+.. +... ..+.. ....+.+|++.|||. ++++.+..|.|
T Consensus 370 ~lfv~~~~~~~i~~v~l~~~g~~~~~~~~~~~~-~~~R~~dv~~gpDG~~Lyv~~d~~G~i 429 (454)
T 1cru_A 370 TLLVPSLKRGVIFRIKLDPTYSTTYDDAVPMFK-SNNRYRDVIASPDGNVLYVLTDTAGNV 429 (454)
T ss_dssp EEEEEBSSSCCEEEEEECTTSSSEEEEEEEESC-CSSCEEEEEECTTSSCEEEEECSSCCE
T ss_pred cEEEeecCCCEEEEEEECCCCCeeeeeeeeecc-cCCCceeEEECCCCCEEEEEECCCCCC
Confidence 3444433456777777664 3211 12222 235899999999997 66655555544
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=95.04 E-value=2.3 Score=39.89 Aligned_cols=147 Identities=15% Similarity=0.172 Sum_probs=74.3
Q ss_pred CCCEEEEEcC----------CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC-----CcEEEE
Q psy15549 92 NGELLASGDD----------VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE-----STIIVW 156 (621)
Q Consensus 92 dg~~las~~d----------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d-----g~i~vw 156 (621)
++.+++.|+. +.+.+||...... ..+..+.........+.+ ++++++.|+.+ ..+.+|
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W-----~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~y 142 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW-----SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERY 142 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEE-----EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeE-----eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEE
Confidence 5666666653 3466777665532 222222222222222333 56677777643 357778
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD-----NTAIMWDVHKGKNLGI-- 229 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d-----g~i~vwd~~~~~~~~~-- 229 (621)
|+.+.+ |.....+........++.+ ++.+++.|+.+ ..+.+||+.+.+-...
T Consensus 143 d~~~~~-------------------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 201 (308)
T 1zgk_A 143 EPERDE-------------------WHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA 201 (308)
T ss_dssp ETTTTE-------------------EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC
T ss_pred CCCCCe-------------------EeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC
Confidence 876653 2211111111112222333 56677777654 4688999877643221
Q ss_pred eccCCcceEEEEEcCCCCEEEEEeCC-----CcEEEEEccCcee
Q psy15549 230 LTEHKKFVQGVAWDPKNQYVATLSSD-----RSLRTYSIQSKKV 268 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp~~~~l~s~~~d-----g~i~iwd~~~~~~ 268 (621)
+.........+.+ +++.++.|+.+ ..+.+||+.+.+-
T Consensus 202 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 202 MNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp CSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 1111111222233 56777777664 4688999887654
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=94.40 E-value=3.9 Score=43.58 Aligned_cols=153 Identities=14% Similarity=0.198 Sum_probs=80.0
Q ss_pred CCCEEEEEc-C------CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC--cEEEEEccCCC
Q psy15549 92 NGELLASGD-D------VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES--TIIVWKQKTDQ 162 (621)
Q Consensus 92 dg~~las~~-d------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg--~i~vwd~~~~~ 162 (621)
++++++.|+ + +.+.+||...... ..+..+......- +++...++.+++.|+.++ .+.+||..+..
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W-----~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~ 524 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREW-----SMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEI 524 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEE-----EECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcE-----EECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCc
Confidence 777777776 2 2356777666532 2222222111111 233324788888887654 68888887754
Q ss_pred CCCCCCCCCcccccccccceeeeee---ecCCCCCeEEEEECCC-CCEEEEEeC--C-----CeEEEEECCCCcE-----
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKI---LRGHLEDVYDISWSPT-STHLISGSV--D-----NTAIMWDVHKGKN----- 226 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~i~~spd-~~~l~s~~~--d-----g~i~vwd~~~~~~----- 226 (621)
|..... .........++.+..+ +++++.|+. + ..+.+||+.+..-
T Consensus 525 -------------------W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~ 585 (695)
T 2zwa_A 525 -------------------FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPIT 585 (695)
T ss_dssp -------------------EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEE
T ss_pred -------------------eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceE
Confidence 221111 1111122233455544 667777765 2 4688999987761
Q ss_pred EEEecc---CCcceEEEEEcCCCCEEEEEeCC--------CcEEEEEccCceee
Q psy15549 227 LGILTE---HKKFVQGVAWDPKNQYVATLSSD--------RSLRTYSIQSKKVI 269 (621)
Q Consensus 227 ~~~~~~---~~~~v~~l~~sp~~~~l~s~~~d--------g~i~iwd~~~~~~~ 269 (621)
-..+.. ....-.+++...+++.++.|+.+ ..|.+||+.+.+-.
T Consensus 586 W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 586 VIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred EEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 111111 11111123333336777777743 45899999887644
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=94.35 E-value=3.4 Score=38.91 Aligned_cols=64 Identities=14% Similarity=0.153 Sum_probs=35.0
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEE--eccCCcceEEEEEcCCCCEEEEEeCC--------------CcEEEE
Q psy15549 203 TSTHLISGSVD-----NTAIMWDVHKGKNLGI--LTEHKKFVQGVAWDPKNQYVATLSSD--------------RSLRTY 261 (621)
Q Consensus 203 d~~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~~~~l~s~~~d--------------g~i~iw 261 (621)
++++++.|+.+ ..+.+||+.+.+-... +.........+. -+++.++.|+.+ ..+.+|
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~y 283 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKY 283 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEE
T ss_pred CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEE
Confidence 56777777653 3577899877653322 111111112222 246667776653 357788
Q ss_pred EccCcee
Q psy15549 262 SIQSKKV 268 (621)
Q Consensus 262 d~~~~~~ 268 (621)
|+.+.+-
T Consensus 284 d~~~~~W 290 (318)
T 2woz_A 284 EDDKKEW 290 (318)
T ss_dssp ETTTTEE
T ss_pred eCCCCEe
Confidence 8877654
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=94.04 E-value=7.9 Score=41.72 Aligned_cols=224 Identities=14% Similarity=0.118 Sum_probs=124.1
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
...|.||.-..+| +|-.|..+|..+ | |-..-..... . -......|.++....+
T Consensus 21 ~n~V~~I~qD~~G------~lWigT~~GL~r-y--------------DG~~~~~~~~----~--~~~~~~~i~~i~~d~~ 73 (758)
T 3ott_A 21 ASVVSCFLQDSEG------LIWIGSNKGLFS-Y--------------DGYSTQQHFT----Y--GENNNTRIYCGVIIDN 73 (758)
T ss_dssp CCCEEEEEECTTS------CEEEEESSCEEE-E--------------CSSCEEECSC----T--TSTTSSCEEEEEEETT
T ss_pred cceEEEEEECCCC------CEEEEECCCccc-c--------------CCCceEEEEc----c--CCCCCceEEEEEEcCC
Confidence 4579999999888 677777888553 2 2110000000 0 0112356888877777
Q ss_pred CCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 93 GELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 93 g~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
|. |-.|+++++..|+..... ...........|.++.. .+| .|..++.+ -|..+|..+.+.. .+.
T Consensus 74 g~-lWigT~~Gl~~yd~~~~~-------f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~---- 137 (758)
T 3ott_A 74 TY-LYMGTDNGILVYNYRADR-------YEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFD---- 137 (758)
T ss_dssp TE-EEEEETTEEEEEETTTTE-------ECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EEC----
T ss_pred Cc-EEEEeCCCeEEEeCCCCE-------EECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-Eec----
Confidence 64 445556788888876541 11111112235776654 345 45556655 5788887654421 000
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cc----CCcceEEEEEcCCCC
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL-TE----HKKFVQGVAWDPKNQ 247 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~----~~~~v~~l~~sp~~~ 247 (621)
..........|.++....++.+.+ |+.. -|..++..+++..... .. ....|.++...+++.
T Consensus 138 ------------~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~ 203 (758)
T 3ott_A 138 ------------TRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQ 203 (758)
T ss_dssp ------------HHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTT
T ss_pred ------------cCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCC
Confidence 000001234688888888887555 4544 4778887766533211 11 122478888887777
Q ss_pred EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
.|..|+. +-+..+|..+++...... .....|.++....+|.+.+..
T Consensus 204 ~lWigt~-~Gl~~~~~~~~~~~~~~~-----------------------l~~~~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 204 CVWIGTE-GYLFQYFPSTGQIKQTEA-----------------------FHNNSIKSLALDGNGDLLAGT 249 (758)
T ss_dssp EEEEEEE-EEEEEEETTTTEEEEEEE-----------------------EEEEEEEEEEECTTCCEEEEE
T ss_pred EEEEEEC-CCCeEEcCCCCeEEeccC-----------------------CCCCeEEEEEEcCCCCEEEEe
Confidence 5555654 457888887665322110 012246788888888776654
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.70 E-value=2.3 Score=40.90 Aligned_cols=59 Identities=8% Similarity=0.027 Sum_probs=29.5
Q ss_pred cEEEEeCCCCc--eeEEEecccccceEEEEEcCCCCeEEEEeCCC------cEEEEEecCCcCCcccCCC
Q psy15549 392 NILLYDTQHAS--PFAFIANIHYTKLTDITWSSDGKVLIASSTDG------YCSIISFGDNEIGIPYVPP 453 (621)
Q Consensus 392 ~i~iwd~~~~~--~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg------~i~iw~~~~~~~~~~~~~~ 453 (621)
.+.+||+.+.+ .+..+..... .-.+ ...+++.++.|+.++ .|.++++++++.......+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~-~~~~--~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRA-YGVS--LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCB-SSEE--EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred eEEEEecCCCceeeCCCCCCCcc-ccee--EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 57789988764 2222221111 1122 234778888888543 3666788888776655443
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=92.61 E-value=6.8 Score=36.76 Aligned_cols=65 Identities=9% Similarity=0.046 Sum_probs=35.9
Q ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEEeccCCc-ceEEEEEcCCCCEEEEEeC------CCcEEEEEccCcee
Q psy15549 203 TSTHLISGSVD-------NTAIMWDVHKGKNLGILTEHKK-FVQGVAWDPKNQYVATLSS------DRSLRTYSIQSKKV 268 (621)
Q Consensus 203 d~~~l~s~~~d-------g~i~vwd~~~~~~~~~~~~~~~-~v~~l~~sp~~~~l~s~~~------dg~i~iwd~~~~~~ 268 (621)
++.+++.|+.+ ..+.+||+.+.+-...-..... .-.+++. .+++.++.|+. -..+.+||+.+.+-
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 56677777753 3578889877653322111111 0112222 35666666664 23588999887654
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.09 E-value=6.1 Score=37.48 Aligned_cols=120 Identities=11% Similarity=0.103 Sum_probs=57.9
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeecccccccc----CcEEEEEEccCCCEEEEEcCCceEEE
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQ----KAVNVVRFSPNGELLASGDDVGKEIW 107 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~----~~V~~l~~spdg~~las~~d~~v~iw 107 (621)
++++++.||.|.-+|..+.+. +|.+........ ....+.. +.+.-+.-..||++.+.....+...|
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~-----~W~~~~~~~~p~-----~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHI-----IWSIEPENFQPL-----IEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEE-----EEEECGGGSCCS-----EECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcE-----EEEecCCccCCc-----EEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 888999999999777766554 788765510000 0011111 11111111235555544444444445
Q ss_pred EeccCccccccceecc--cccccCCCeE-EEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 108 YLTERESGIANVEFAS--DLSRHQKAVN-VVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 108 ~~~~~~~~~~~~~~~~--~~~~h~~~V~-~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
..... ..+. .+.+...+|. ..--+..+..+++|+.+|.+...|+.+++.+..+.
T Consensus 82 ~~~~~-------~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 82 PLSIR-------QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp EEEHH-------HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred eeccc-------cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 44322 1110 0111111110 00000134578888888999888888887766554
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=91.53 E-value=12 Score=37.33 Aligned_cols=27 Identities=7% Similarity=-0.164 Sum_probs=19.1
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEee
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDY 45 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~ 45 (621)
.-+.|+|.||+. .+|+++...|.|+++
T Consensus 15 ~P~~~a~~pdG~----~rl~V~er~G~i~~~ 41 (463)
T 2wg3_C 15 QPVGALHSGDGS----QRLFILEKEGYVKIL 41 (463)
T ss_dssp SEEEEECCSSSS----CCEEEEETTTEEEEE
T ss_pred CceEEEECCCCC----eEEEEEeCCceEEEE
Confidence 457999999983 135566678988833
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=91.50 E-value=10 Score=36.27 Aligned_cols=29 Identities=7% Similarity=-0.012 Sum_probs=17.5
Q ss_pred CCcEEEEEEcCC------cEEEEeCCCCceeEEEe
Q psy15549 380 PYRIVIAVATEN------NILLYDTQHASPFAFIA 408 (621)
Q Consensus 380 ~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~ 408 (621)
++..++.|+.++ .|.++++.+++.+....
T Consensus 316 ~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 316 NNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp TTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 457777777542 46667888877665543
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=91.42 E-value=16 Score=38.81 Aligned_cols=65 Identities=11% Similarity=0.148 Sum_probs=39.5
Q ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEE--eccCCcceEEEEEcCCCCEEEEEeCCC--cEEEEEccCcee
Q psy15549 203 TSTHLISGSVD------NTAIMWDVHKGKNLGI--LTEHKKFVQGVAWDPKNQYVATLSSDR--SLRTYSIQSKKV 268 (621)
Q Consensus 203 d~~~l~s~~~d------g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~~~~l~s~~~dg--~i~iwd~~~~~~ 268 (621)
++++++.|+.+ ..+.+||+.+.+-... +...... .+++...++..++.|+.++ .+.+||..+.+-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCce
Confidence 67777777753 3578999887543221 1111111 2233324788888888754 689999887654
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=88.36 E-value=2 Score=43.36 Aligned_cols=73 Identities=15% Similarity=0.092 Sum_probs=52.7
Q ss_pred CCeEEEEECCCCCEEEEEeC-CCeEEEEECCCC------cE-------EEEeccCCcceEEEEEcCCCCEEEEEeCCCcE
Q psy15549 193 EDVYDISWSPTSTHLISGSV-DNTAIMWDVHKG------KN-------LGILTEHKKFVQGVAWDPKNQYVATLSSDRSL 258 (621)
Q Consensus 193 ~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~------~~-------~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i 258 (621)
.....+.++|||++++.++. +.++.++|++.. +. ...... .-.....+|.++|+...+.--|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecceE
Confidence 44567899999999888765 789999998742 11 223332 3345678999999555566679999
Q ss_pred EEEEccCc
Q psy15549 259 RTYSIQSK 266 (621)
Q Consensus 259 ~iwd~~~~ 266 (621)
.-|++...
T Consensus 402 vkWni~~a 409 (638)
T 3sbq_A 402 VKWNMEEA 409 (638)
T ss_dssp EEEEHHHH
T ss_pred EEEeccHH
Confidence 99999653
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=87.94 E-value=1.7 Score=41.37 Aligned_cols=65 Identities=9% Similarity=0.021 Sum_probs=42.9
Q ss_pred CEEEEEeCCCeEEEEECCCCcEEEEeccC-CcceEEEEE--cCCCCEEEEE--eCCCcEEEEEccCceee
Q psy15549 205 THLISGSVDNTAIMWDVHKGKNLGILTEH-KKFVQGVAW--DPKNQYVATL--SSDRSLRTYSIQSKKVI 269 (621)
Q Consensus 205 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~v~~l~~--sp~~~~l~s~--~~dg~i~iwd~~~~~~~ 269 (621)
.+++.++.||.|.-+|..+|+....+... ..++....- .+.+..++.+ +.||.|..++..+|...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE
Confidence 47888999999999999999999888654 122222110 0112234433 57999999998877443
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=87.53 E-value=24 Score=35.12 Aligned_cols=58 Identities=12% Similarity=0.005 Sum_probs=33.9
Q ss_pred CcEEEEEEccCCC--EEEEEcCCceEEEEeccCccccccceecc-ccc-----ccCCCeEEEEECCC
Q psy15549 82 KAVNVVRFSPNGE--LLASGDDVGKEIWYLTERESGIANVEFAS-DLS-----RHQKAVNVVRFSPN 140 (621)
Q Consensus 82 ~~V~~l~~spdg~--~las~~d~~v~iw~~~~~~~~~~~~~~~~-~~~-----~h~~~V~~i~~sp~ 140 (621)
..-..|+|.|||. +|++-..+.|++++...... ...+.-+. .+. ........|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~-~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIF-KEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBC-SSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCee-eeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3567899999985 77776688787775332110 00111111 111 12467889999996
|
| >3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A* | Back alignment and structure |
|---|
Probab=81.21 E-value=40 Score=32.41 Aligned_cols=99 Identities=11% Similarity=0.105 Sum_probs=56.2
Q ss_pred eEEEEECCCC--cEEEEecc------CCcceEEEEEc---CC----CCEEEEEe-CCCcEEEEEccCceeeeecccCCCC
Q psy15549 215 TAIMWDVHKG--KNLGILTE------HKKFVQGVAWD---PK----NQYVATLS-SDRSLRTYSIQSKKVISRACRSKLP 278 (621)
Q Consensus 215 ~i~vwd~~~~--~~~~~~~~------~~~~v~~l~~s---p~----~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~ 278 (621)
.|.+||+.+. +.++++.- ....+..+.+. |+ +.+++.+. ..+.|.+||+.+++.-+.+...-.+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5777888887 77766532 23457778877 32 33444443 3678999999998877655322111
Q ss_pred CCCccccccccccccccCCcccceeeeeecCC----CCeEEecc
Q psy15549 279 VDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD----GQLLIAPS 318 (621)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd----g~~l~~~s 318 (621)
.....-..... .+ .....+..++++|+ ++.|+...
T Consensus 204 d~~~~~~i~G~--~~---~~~~Gi~gIaLsp~~~~~~~~LYf~p 242 (381)
T 3q6k_A 204 ERPTKFDYGGK--EY---EFKAGIFGITLGDRDSEGNRPAYYLA 242 (381)
T ss_dssp CSCEEEEETTE--EE---EECCCEEEEEECCCCTTSCCEEEEEE
T ss_pred ccCcceEECCE--Ee---EeccCceEEEecCCcCCCCeEEEEEE
Confidence 10000000000 00 12346789999998 77777655
|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
Probab=81.20 E-value=33 Score=31.42 Aligned_cols=144 Identities=13% Similarity=0.049 Sum_probs=73.0
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
.|..++..... .++.. ++.+..|-......- .... .....|..++...+. .++. . ||.|..|-.....
T Consensus 25 ~i~~ia~G~~h-~~~l~-~G~v~~wG~n~~Gql----g~p~---~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~G 92 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLALK-GGKVLGWGANLNGQL----TMPA---ATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDG 92 (282)
T ss_dssp SCCEEEECSSE-EEEEE-TTEEEEEECCSSSTT----SCCG---GGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTS
T ss_pred CCcEEEeCCCe-EEEEE-CCEEEEEeCCCCCCC----CCCc---cCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCC
Confidence 46666654432 33333 777777765543211 1110 112356677765443 3333 4 8999999766544
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~ 242 (621)
.+..- ..-...|..++...+ +.+.-. +|.|+.|-....-.+.........|..++.
T Consensus 93 qlg~P---------------------~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~ 148 (282)
T 3qhy_B 93 QTTVP---------------------AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDG 148 (282)
T ss_dssp TTCCC---------------------GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEE
T ss_pred CCCCC---------------------cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEc
Confidence 33110 001235777766543 444445 899999976542211111122344666655
Q ss_pred cCCCCEEEEEeCCCcEEEEEccC
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~ 265 (621)
.. .+.+... ||.|..|-...
T Consensus 149 G~--~~~~~l~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 149 GV--YTALAVK-NGGVIAWGDNY 168 (282)
T ss_dssp CS--SEEEEEE-TTEEEEEECCT
T ss_pred cc--CEEEEEE-CCEEEEecCCC
Confidence 43 2333334 78888886543
|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
Probab=80.01 E-value=36 Score=31.15 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=71.2
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
.|..++...+..+++ . ++.+..|-......- ... ......|..++...+..++ -. ||.|..|-.....
T Consensus 103 ~v~~ia~G~~hs~al-~-~G~v~~wG~n~~gql----g~~---~~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~n~~g 170 (282)
T 3qhy_B 103 GVDAIAAGAWASYAL-K-DGKVIAWGDDSDGQT----TVP---AEAQSGVTALDGGVYTALA--VK-NGGVIAWGDNYFG 170 (282)
T ss_dssp SEEEEEEETTEEEEE-E-TTEEEEEECCTTSTT----SCC---GGGGSSEEEEEECSSEEEE--EE-TTEEEEEECCTTS
T ss_pred CeEEEECcCCEEEEE-e-CCeEEEecCCCCCcC----CCC---ccCCCCeEEEEcccCEEEE--EE-CCEEEEecCCCCC
Confidence 566666554433333 3 777777765543210 000 0112346666654332222 23 6888888765543
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~ 242 (621)
.+..- ......|..++.-.+. .++. .+|.|+.|-......+..-......|..++.
T Consensus 171 qlg~p---------------------~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~ 226 (282)
T 3qhy_B 171 QTTVP---------------------AEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIAS 226 (282)
T ss_dssp TTSCC---------------------GGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEE
T ss_pred CCCCc---------------------eecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEc
Confidence 33100 0112456666654332 2333 5899999976542222111112234667765
Q ss_pred cCCCCEEEEEeCCCcEEEEEccC
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQS 265 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~ 265 (621)
.... .++ .. ||.|..|=...
T Consensus 227 G~~h-~~a-l~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 227 GEWY-SLA-LK-NGKVIAWGSSR 246 (282)
T ss_dssp CSSC-EEE-EE-TTEEEEESTTC
T ss_pred CCCE-EEE-EE-CCEEEEecCCC
Confidence 5432 233 33 99999986544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 621 | ||||
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-20 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 7e-15 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-12 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-10 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-20 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-19 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 5e-17 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-14 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-13 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 9e-19 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-15 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-15 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-10 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-13 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 3e-12 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 9e-12 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-09 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-08 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 0.001 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-13 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-09 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 4e-08 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-06 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 4e-13 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 1e-12 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 8e-09 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 2e-06 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 0.001 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 6e-13 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 5e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 0.001 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 6e-13 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-12 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 4e-11 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-04 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 5e-04 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 4e-11 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 5e-08 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 2e-05 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 3e-04 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 8e-11 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 6e-09 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 1e-06 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-05 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 0.001 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 0.002 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 4e-10 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 3e-08 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-06 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 5e-10 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-07 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 4e-07 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 5e-06 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 5e-10 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-09 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 6e-09 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 6e-07 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 3e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 4e-06 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-04 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 8e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-08 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 4e-07 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 4e-07 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 7e-04 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 4e-07 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 9e-05 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 8e-07 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 1e-06 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 2e-06 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-05 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 3e-06 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 2e-05 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 0.003 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 8e-05 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-04 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 1e-04 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 0.001 |
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 90.6 bits (223), Expect = 2e-20
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 19/138 (13%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIV 184
+ H+ +N + F PNG A+G D++T ++ + ++
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDL-------------------RADQELM 262
Query: 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244
T + + +S+S + L++G D +WD K G+L H V +
Sbjct: 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD 322
Query: 245 KNQYVATLSSDRSLRTYS 262
VAT S D L+ ++
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 74.0 bits (180), Expect = 7e-15
Identities = 47/266 (17%), Positives = 87/266 (32%), Gaps = 51/266 (19%)
Query: 77 LSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVR 136
L H + + + + LL S GK I + + + + + V
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA------IPLRSSWVMTCA 104
Query: 137 FSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNK----------------- 179
++P+G +A G ++ ++ KT +
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT 164
Query: 180 -------EHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE 232
E T GH DV +S +P + +SG+ D +A +WDV +G T
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPL 292
H+ + + + P AT S D + R + D+ +
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLF---------------------DLRADQELMT 263
Query: 293 FHDDTMKSFFRRLTFSPDGQLLIAPS 318
+ D + ++FS G+LL+A
Sbjct: 264 YSHDNIICGITSVSFSKSGRLLLAGY 289
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 65.9 bits (159), Expect = 3e-12
Identities = 51/284 (17%), Positives = 93/284 (32%), Gaps = 12/284 (4%)
Query: 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTA 216
K D L + ++N+D + + LRGHL +Y + W S L+S S D
Sbjct: 23 KACADATLSQI-TNNIDPVGRIQMR--TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKL 79
Query: 217 IMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSK 276
I+WD + + + +V A+ P YVA D Y++++++ R R
Sbjct: 80 IIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139
Query: 277 LPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHV 336
+ + L GQ + +
Sbjct: 140 AGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ-------QTTTFTGHTGDVMSLSL 192
Query: 337 FTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNI--L 394
L C S + + V C F SD + P A +++ L
Sbjct: 193 APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRL 252
Query: 395 LYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSI 438
+ + +T +++S G++L+A D C++
Sbjct: 253 FDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 60.5 bits (145), Expect = 2e-10
Identities = 27/199 (13%), Positives = 58/199 (29%), Gaps = 48/199 (24%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187
H V + +P+ L SG +++ +W + +
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM---------------------CRQT 221
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF--VQGVAWDPK 245
GH D+ I + P +GS D T ++D+ + L + + V++
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281
Query: 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL 305
+ + D + + V HD+ + L
Sbjct: 282 GRLLLAGYDDFNCNVWDALKADRAG-------------------VLAGHDNRVSC----L 318
Query: 306 TFSPDGQLLIAPSGCLENS 324
+ DG + +G ++
Sbjct: 319 GVTDDGMAVA--TGSWDSF 335
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 89.8 bits (221), Expect = 3e-20
Identities = 58/335 (17%), Positives = 120/335 (35%), Gaps = 53/335 (15%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN------------- 171
LS H+ V V F P ++ S +++TI VW +T
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 172 --------LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK 223
+ + + + + + + GH +V +S P H++S S D T MW+V
Sbjct: 73 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 132
Query: 224 GKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSH 283
G + T H+++V+ V + +A+ S+D+++R + + +K+ + H
Sbjct: 133 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL--------REH 184
Query: 284 ELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLN 343
+ + + + S + G S S K I + V T CL
Sbjct: 185 RHVVECISWAPESSYSSI---SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 241
Query: 344 KPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP 403
+L + V+ LF + +++ A + + ++D ++
Sbjct: 242 -------TLVGHDNWVRGV-------------LFHSGGKFILSCADDKTLRVWDYKNKRC 281
Query: 404 FAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSI 438
+ N H +T + + ++ S D +
Sbjct: 282 MKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 315
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 86.7 bits (213), Expect = 3e-19
Identities = 38/202 (18%), Positives = 80/202 (39%), Gaps = 11/202 (5%)
Query: 62 TERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEF 121
T + + + H++ V +VR + +G L+AS + T R +A E
Sbjct: 124 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ------TVRVWVVATKEC 177
Query: 122 ASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENV--NK 179
++L H+ V + ++P + + + + + P S + D+ +
Sbjct: 178 KAELREHRHVVECISWAPESSYSSISEATGSETKK---SGKPGPFLLSGSRDKTIKMWDV 234
Query: 180 EHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQG 239
+ L GH V + + ++S + D T +WD + + L H+ FV
Sbjct: 235 STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 294
Query: 240 VAWDPKNQYVATLSSDRSLRTY 261
+ + YV T S D++++ +
Sbjct: 295 LDFHKTAPYVVTGSVDQTVKVW 316
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 80.2 bits (196), Expect = 5e-17
Identities = 46/236 (19%), Positives = 88/236 (37%), Gaps = 32/236 (13%)
Query: 89 FSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD 148
PNG+ + S + + + + H++ V +VR + +G L+AS
Sbjct: 109 IMPNGDHIVSASRDKTIKMWEVQTGYCVKT------FTGHREWVRMVRPNQDGTLIASCS 162
Query: 149 DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208
++ T+ VW T + E E ++ + S P L+
Sbjct: 163 NDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKP-GPFLL 221
Query: 209 SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV 268
SGS D T MWDV G L L H +V+GV + +++ + + D++LR + ++K+
Sbjct: 222 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 281
Query: 269 ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENS 324
+ + V S L F ++ +G ++ +
Sbjct: 282 MKTLNAHEHFVTS-----------------------LDFHKTAPYVV--TGSVDQT 312
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 72.9 bits (177), Expect = 2e-14
Identities = 47/278 (16%), Positives = 99/278 (35%), Gaps = 28/278 (10%)
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247
L GH V + + P + ++S S D T +WD G L H VQ +++D +
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHEL----------FDKVVPLFHDDT 297
+A+ S+D +++ + Q + I V S + DK + ++ T
Sbjct: 73 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 132
Query: 298 MK---------SFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVC 348
+ R + + DG L+ S S + + V V T+ C +
Sbjct: 133 GYCVKTFTGHREWVRMVRPNQDGTLIA--------SCSNDQTVRVWVVATKECKAELREH 184
Query: 349 LPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIA 408
++ S A + + P +++ + + I ++D +
Sbjct: 185 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 244
Query: 409 NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEI 446
H + + + S GK +++ + D + + +
Sbjct: 245 G-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 281
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 70.2 bits (170), Expect = 1e-13
Identities = 34/196 (17%), Positives = 60/196 (30%), Gaps = 36/196 (18%)
Query: 29 NCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSR----HQKAV 84
+ I + D V ++ L E + + +A + S
Sbjct: 154 DGTLIASCSNDQTV-----RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGS 208
Query: 85 NVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL 144
+ G L SG + + L H V V F G+ +
Sbjct: 209 ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT------LVGHDNWVRGVLFHSGGKFI 262
Query: 145 ASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS 204
S D+ T+ VW K + + K L H V + + T+
Sbjct: 263 LSCADDKTLRVWDYKNKRCM---------------------KTLNAHEHFVTSLDFHKTA 301
Query: 205 THLISGSVDNTAIMWD 220
++++GSVD T +W+
Sbjct: 302 PYVVTGSVDQTVKVWE 317
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 86.4 bits (212), Expect = 9e-19
Identities = 35/183 (19%), Positives = 68/183 (37%), Gaps = 16/183 (8%)
Query: 89 FSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG 147
+G+ +A+G +W + H+ +V V F+ +G+ + SG
Sbjct: 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272
Query: 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL 207
+ ++ +W + + + + N GH + V ++ + ++
Sbjct: 273 SLDRSVKLWNLQNANNKSDSKTPN---------SGTCEVTYIGHKDFVLSVATTQNDEYI 323
Query: 208 ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVA------WDPKNQYVATLSSDRSLRTY 261
+SGS D + WD G L +L H+ V VA P+ AT S D R +
Sbjct: 324 LSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 383
Query: 262 SIQ 264
+
Sbjct: 384 KYK 386
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 75.6 bits (184), Expect = 3e-15
Identities = 58/395 (14%), Positives = 127/395 (32%), Gaps = 54/395 (13%)
Query: 77 LSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLT--ERESGIANVEFASDLSRHQKAVNV 134
+ H K + + + + +Y+ +VE L H V
Sbjct: 9 RANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLD-HTSVVCC 67
Query: 135 VRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLED 194
V+FS +GE LA+G ++ T V++ + D + T
Sbjct: 68 VKFSNDGEYLATGCNK-TTQVYRVSDGSLVARLSD---DSAANKDPENLNTSSSPSSDLY 123
Query: 195 VYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS 254
+ + +SP L +G+ D +WD+ K + IL H++ + + + P + + S
Sbjct: 124 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 183
Query: 255 DRSLRTYSIQSKKVISRACRSKLPVDSSHEL----------FDKVVPLFHDDTMKSFF-- 302
DR++R + +++ + + D+ V ++ +T
Sbjct: 184 DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL 243
Query: 303 --------------RRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVC 348
+ F+ DGQ +++ S D + K ++ + ++ P
Sbjct: 244 DSENESGTGHKDSVYSVVFTRDGQSVVSGS-----LDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 349 LPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIA 408
+ Y V +D +++ + + +L +D + +P +
Sbjct: 299 TCEVTYIGHKDFVLSVAT---TQND--------EYILSGSKDRGVLFWDKKSGNPLLMLQ 347
Query: 409 N-----IHYTKLTDITWSSDGKVLIASSTDGYCSI 438
I + + V S D I
Sbjct: 348 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARI 382
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 75.6 bits (184), Expect = 3e-15
Identities = 34/207 (16%), Positives = 62/207 (29%), Gaps = 47/207 (22%)
Query: 29 NCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88
+ I G D V ++W + H+ +V V
Sbjct: 216 DGKYIAAGSLDRAV--------------RVWDSETGFLVERLDSENESGTGHKDSVYSVV 261
Query: 89 FSPNGELLASGDDVGKEIWYLTERESGIA------NVEFASDLSRHQKAVNVVRFSPNGE 142
F+ +G+ + SG + + + + + H+ V V + N E
Sbjct: 262 FTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE 321
Query: 143 LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI---- 198
+ SG + ++ W +K+ L +L+GH V +
Sbjct: 322 YILSGSKDRGVLFWDKKSGNPL---------------------LMLQGHRNSVISVAVAN 360
Query: 199 --SWSPTSTHLISGSVDNTAIMWDVHK 223
S P +GS D A +W K
Sbjct: 361 GSSLGPEYNVFATGSGDCKARIWKYKK 387
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 60.6 bits (145), Expect = 2e-10
Identities = 34/302 (11%), Positives = 98/302 (32%), Gaps = 31/302 (10%)
Query: 195 VYDISWSPTST-HLISGSVDNTAIMWDVHKGKNLGI----LTEHKKFVQGVAWDPKNQYV 249
+ + S + ++ I+++ + + + +H V V + +Y+
Sbjct: 18 PFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYL 77
Query: 250 ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309
AT +++ + Y + +++R L DS+ + + + + R + FSP
Sbjct: 78 AT-GCNKTTQVYRVSDGSLVAR-----LSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP 131
Query: 310 DGQLLIAPSGC-------------LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYS 356
DG+ L + + + I F +++ +
Sbjct: 132 DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 191
Query: 357 VAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENN-ILLYDTQHASPFAFIANI----- 410
+ C + ++ IA + + + ++D++ + +
Sbjct: 192 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT 251
Query: 411 -HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPV 469
H + + ++ DG+ +++ S D + + + P+ + + V
Sbjct: 252 GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV 311
Query: 470 RS 471
S
Sbjct: 312 LS 313
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.5 bits (168), Expect = 2e-13
Identities = 32/313 (10%), Positives = 65/313 (20%), Gaps = 32/313 (10%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187
H + V V S + +G + VW D + + +
Sbjct: 50 HGEVVCAVTISNPTRHVYTGGK-GCVKVW----------------DISHPGNKSPVSQLD 92
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247
+ P LI G +T +WD+ A
Sbjct: 93 CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD 152
Query: 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307
+ A + D + T
Sbjct: 153 S-----------KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG 201
Query: 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFE 367
D + + + AV + S + V
Sbjct: 202 GLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261
Query: 368 LKPSDDKP--LFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK 425
F + ++ +N + + T + + + + S D K
Sbjct: 262 HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCDISVDDK 319
Query: 426 VLIASSTDGYCSI 438
++ S D ++
Sbjct: 320 YIVTGSGDKKATV 332
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.6 bits (158), Expect = 3e-12
Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 1/83 (1%)
Query: 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240
+ L H V + ++ +S DN W G ++ ++ V
Sbjct: 254 NKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSC 312
Query: 241 AWDPKNQYVATLSSDRSLRTYSI 263
++Y+ T S D+ Y +
Sbjct: 313 DISVDDKYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.4 bits (155), Expect = 9e-12
Identities = 21/142 (14%), Positives = 43/142 (30%), Gaps = 29/142 (20%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 139
+ + + P GE LA G + N L H+ V ++F+
Sbjct: 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVL-------HVNKPDKYQLHLHESCVLSLKFAY 275
Query: 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDIS 199
G+ S ++ + W+ + + V
Sbjct: 276 CGKWFVSTGKDNLLNAWRTPYGASIFQS----------------------KESSSVLSCD 313
Query: 200 WSPTSTHLISGSVDNTAIMWDV 221
S ++++GS D A +++V
Sbjct: 314 ISVDDKYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.5 bits (137), Expect = 2e-09
Identities = 35/280 (12%), Positives = 80/280 (28%), Gaps = 43/280 (15%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 139
H + V V S + +G ++W ++ + + D + + P
Sbjct: 50 HGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQL--DCLNRDNYIRSCKLLP 107
Query: 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEE-----------------------N 176
+G L G + ST+ +W + ++
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167
Query: 177 VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF 236
+ + + + +GH + I S T L +G +DNT + + +
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT-VRSWDLREGRQLQQHDFTSQ 226
Query: 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSK----LPVDSSHELF-----D 287
+ + + P +++A ++ + L + F D
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD 286
Query: 288 KVVPLFHDDTMKSFF--------RRLTFSPDGQLLIAPSG 319
++ + S F S D + ++ SG
Sbjct: 287 NLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSG 326
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.4 bits (129), Expect = 2e-08
Identities = 24/261 (9%), Positives = 64/261 (24%), Gaps = 16/261 (6%)
Query: 190 GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE-----HKKFVQGVAWDP 244
H E V ++ S + H+ +G +WD+ N +++ +++ P
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304
+ + S + + + + L
Sbjct: 108 DGCTLIV-GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166
Query: 305 LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPV 364
+ + L+ G + + T ++T N
Sbjct: 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQ 226
Query: 365 LFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDG 424
+F L + P + ++H + + + ++ G
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNV---------EVLHVNKPDKYQLHLHESCVLSLKFAYCG 277
Query: 425 KVLIASSTDGYCSIISFGDNE 445
K +++ D +
Sbjct: 278 KWFVSTGKDNLLNAWRTPYGA 298
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.0 bits (89), Expect = 0.001
Identities = 16/113 (14%), Positives = 29/113 (25%), Gaps = 20/113 (17%)
Query: 208 ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKK 267
+ D + + L H + V V ++V T ++ + I
Sbjct: 26 VPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYT-GGKGCVKVWDISHPG 83
Query: 268 VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320
S + D+ ++S PDG LI
Sbjct: 84 NKSPVSQLDCLN--------------RDNYIRS----CKLLPDGCTLIVGGEA 118
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 69.9 bits (169), Expect = 2e-13
Identities = 41/274 (14%), Positives = 81/274 (29%), Gaps = 14/274 (5%)
Query: 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANV 71
+ ++ ++ +R+V + + + V
Sbjct: 118 KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTV 177
Query: 72 EFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKA 131
+ V S G L+A+G + G + N E + + +
Sbjct: 178 ---ESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS 233
Query: 132 VNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGH 191
+ V+FSP G LLA D ++ + + +V + H
Sbjct: 234 IRSVKFSPQGSLLAIAHDSNSFGCITLYETE-----FGERIGSLSVPTHSSQASLGEFAH 288
Query: 192 LEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251
V +S++ + L S D WDV + + L H ++ +A
Sbjct: 289 SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDI-----LAV 343
Query: 252 LSSDRSLRTYSIQSKKVISRACRSKLPVDSSHEL 285
SL + K + + RS + D + L
Sbjct: 344 DEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESL 377
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.2 bits (136), Expect = 2e-09
Identities = 26/174 (14%), Positives = 48/174 (27%), Gaps = 17/174 (9%)
Query: 187 ILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT------------EHK 234
+ H D++ +S + +S S D +WD N H
Sbjct: 9 AGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV 66
Query: 235 KFVQGVAWD-PKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKV--VP 291
+Q + D + VAT S L Y I + + KL + S +
Sbjct: 67 DVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK 126
Query: 292 LFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKP 345
+ R + G I + ++ + + + P
Sbjct: 127 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESP 180
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.7 bits (127), Expect = 4e-08
Identities = 25/209 (11%), Positives = 57/209 (27%), Gaps = 42/209 (20%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVE----FASDLSRHQKAV--N 133
H + V + + SGD K +W ++ + F H V
Sbjct: 13 HDADIFSVSACNSFTVSCSGDGYLK-VWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQA 71
Query: 134 VVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLE 193
+ R + L+A+ ++ ++ + DE +
Sbjct: 72 IERDAFELCLVATTSFSGDLLFYRITRE-----------DETKKVIFEKLDLLDSDMKKH 120
Query: 194 DVYDISWSPTSTH-----LISGSVDNTAIMWDVHKGK------------------NLGIL 230
+ + W ++ L++ V T +W H +
Sbjct: 121 SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESP 180
Query: 231 TEHKKFVQGVAWDPKNQYVATLSSDRSLR 259
+F V +AT ++ +++
Sbjct: 181 MTPSQFATSVDISE-RGLIATGFNNGTVQ 208
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.9 bits (112), Expect = 2e-06
Identities = 34/301 (11%), Positives = 81/301 (26%), Gaps = 71/301 (23%)
Query: 54 KTGKIWYLTERE---SGIANVEFASDLSRHQKAVNVVRFSPNGE------LLASGDDVGK 104
+ +T + I D + + +++ + + L+A+
Sbjct: 89 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTT 148
Query: 105 EIWYLTERESGIANVEF-----------ASDLSRHQKAVNVVRFSPNGELLASGDDESTI 153
IW ++ + V S G L+A+G + T+
Sbjct: 149 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTV 207
Query: 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD 213
+ + T + ++ + + + + +SP + L
Sbjct: 208 QISELSTLR---------------PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 252
Query: 214 NTAIMW----------------DVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRS 257
N+ H + H +V ++++ + + + D
Sbjct: 253 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK 312
Query: 258 LRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317
LR + +++K+ I L H D ++ L G L P
Sbjct: 313 LRFWDVKTKERI-------------TTLNM------HCDDIEIEEDILAVDEHGDSLAEP 353
Query: 318 S 318
Sbjct: 354 G 354
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 68.7 bits (166), Expect = 4e-13
Identities = 16/226 (7%), Positives = 50/226 (22%), Gaps = 27/226 (11%)
Query: 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWY 60
+K + V ++ + A L + +R
Sbjct: 148 LKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYR-SLDPSPD 206
Query: 61 LTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIW-YLTERESGIANV 119
V + + N + P +G+ +++ + +
Sbjct: 207 RVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDY 266
Query: 120 EFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNK 179
L +V ++ ++ +
Sbjct: 267 RMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYD---------------------- 304
Query: 180 EHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK 225
+ T+ + ++ D+ S ++ D + + K +
Sbjct: 305 ---VKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPE 347
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 67.2 bits (162), Expect = 1e-12
Identities = 18/190 (9%), Positives = 45/190 (23%), Gaps = 19/190 (10%)
Query: 79 RHQKAVNVVRFSPNGELLASG-DDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRF 137
F + + L V + + N +
Sbjct: 176 TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235
Query: 138 SPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYD 197
P +G+ + + + NV+ + + L +
Sbjct: 236 VPRSMTSEAGEYDLNDMYKRSS--------------PINVDPGDYRMIIPLESSILIYSV 281
Query: 198 ISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRS 257
+ + + +DV K +TE K + + + V D
Sbjct: 282 PVHGEFAAYYQGAPEKGVLLKYDVKTRK----VTEVKNNLTDLRLSADRKTVMVRKDDGK 337
Query: 258 LRTYSIQSKK 267
+ T+ ++ +
Sbjct: 338 IYTFPLEKPE 347
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 55.6 bits (132), Expect = 8e-09
Identities = 41/366 (11%), Positives = 80/366 (21%), Gaps = 59/366 (16%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 139
+ VR + ++ + + + +G A + V +
Sbjct: 41 EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKF-----EENLGNVFAMGVDR 95
Query: 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDIS 199
NG+ +D I+ +T + S + +
Sbjct: 96 NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDN-----------SRFIAY 144
Query: 200 WSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLR 259
P G V ++D+ K T A+D ++ + LS
Sbjct: 145 GFPLKHGETDGYVMQAIHVYDMEGRKIFAA-TTENSHDYAPAFDADSKNLYYLSYRSLDP 203
Query: 260 TYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSG 319
+ + + P A
Sbjct: 204 SPDRVVLNFSFEVVSKPFVIP------------LIPGSPNPT----KLVPRSMTSEAGEY 247
Query: 320 CLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKL 379
L + PI+V R L+ +
Sbjct: 248 DLNDMYKRSSPINVDPGDYRMI--------IPLESSILIYSVPV-------------HGE 286
Query: 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSII 439
+ +L YD + N+ TD+ S+D K ++ DG
Sbjct: 287 FAAYYQGAPEKGVLLKYDVKTRKVTEVKNNL-----TDLRLSADRKTVMVRKDDGKIYTF 341
Query: 440 SFGDNE 445
E
Sbjct: 342 PLEKPE 347
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 48.3 bits (113), Expect = 2e-06
Identities = 9/110 (8%), Positives = 28/110 (25%), Gaps = 12/110 (10%)
Query: 55 TGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERE 113
+ + L +V + G + + R+
Sbjct: 250 NDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK 309
Query: 114 SGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163
++ + + +R S + + + D+ I + + +D
Sbjct: 310 -----------VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPED 348
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 39.5 bits (90), Expect = 0.001
Identities = 23/242 (9%), Positives = 61/242 (25%), Gaps = 9/242 (3%)
Query: 195 VYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS 254
+ +SP LI+ A + DV G + + ++ V + +
Sbjct: 5 KFAEDFSPLDGDLIAFVSRGQAFIQDV-SGTYVLKVP-EPLRIRYVRRGGDTKVAFIHGT 62
Query: 255 D--RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312
L Y ++ K + + V + + + +D + L
Sbjct: 63 REGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV 121
Query: 313 LLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSD 372
+ + + + + + + F + ++ Y + + D
Sbjct: 122 IERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHD 181
Query: 373 DKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASST 432
P F + + ++ + D + +K I
Sbjct: 182 YAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE----VVSKPFVIPLIPGSPNPTKLVP 237
Query: 433 DG 434
Sbjct: 238 RS 239
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 67.7 bits (163), Expect = 6e-13
Identities = 25/297 (8%), Positives = 74/297 (24%), Gaps = 40/297 (13%)
Query: 184 VTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE-HKKFVQGVAW 242
+ ++ GH + + +S S L S + WD+ G + + + H + G+
Sbjct: 4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 63
Query: 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVD---------------------- 280
+ T+S D L+ V S +
Sbjct: 64 TS-KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 281 -------------SSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDST 327
S + + + ++ ++ + +
Sbjct: 123 AIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEI 182
Query: 328 RKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387
+ ++ +P + + + +
Sbjct: 183 TSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATG 242
Query: 388 ATENNILLYDTQHASPFAFIA-NIHYTKLTDITWSSDGKVLIASSTDGYCSI--ISF 441
+ +N++++++ S I H + + ++++ D + F
Sbjct: 243 SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVPF 299
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 40.0 bits (91), Expect = 5e-04
Identities = 4/46 (8%), Positives = 17/46 (36%)
Query: 224 GKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVI 269
G + H K + ++ + + + ++ + ++ I +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISN 47
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 39.2 bits (89), Expect = 0.001
Identities = 20/144 (13%), Positives = 43/144 (29%), Gaps = 7/144 (4%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 138
H KA+ + S +G+ L S D G W ++ H + ++ +
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDISTGI------SNRVFPDVHATMITGIKTT 64
Query: 139 PNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198
G+L D+ +V + D + ++ L + + I I
Sbjct: 65 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAI 124
Query: 199 SWSPTSTHLISGSVDNTAIMWDVH 222
T + + + +
Sbjct: 125 YSHGKLTEVPISYNSSCVALSNDK 148
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 68.3 bits (165), Expect = 6e-13
Identities = 11/95 (11%), Positives = 32/95 (33%), Gaps = 19/95 (20%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187
+ ++ ++ + +A + + ++ + W+
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIY-------------------EKSGNKWVQVHE 46
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH 222
L+ H V + W+P S +++ D A +W +
Sbjct: 47 LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 81
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.8 bits (161), Expect = 2e-12
Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 191 HLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN--LGILTEHKKFVQGVAWDPKNQY 248
+E + +W+ T + ++ +++ K + L EH V GV W P +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 249 VATLSSDRSLRTYSIQ 264
+ T +DR+ ++++
Sbjct: 66 IVTCGTDRNAYVWTLK 81
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 62.6 bits (150), Expect = 4e-11
Identities = 54/383 (14%), Positives = 110/383 (28%), Gaps = 57/383 (14%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 138
+ ++ ++ + +A + + I+ + + +L H V V ++
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-----WVQVHELKEHNGQVTGVDWA 60
Query: 139 PNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198
P+ + + + VW + W T ++ +
Sbjct: 61 PDSNRIVTCGTDRNAYVW-------------------TLKGRTWKPTLVILRINRAARCV 101
Query: 199 SWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF----VQGVAWDPKNQYVATLSS 254
W+P GS + + + + KK V + W P + +A S
Sbjct: 102 RWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 161
Query: 255 DRSLRTYSIQSKKVISRACRSKLPVDS-----SHELFDKVVPLFHDDTMKSFFRRLTFSP 309
D R +S K+V R + E + + R S
Sbjct: 162 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH 221
Query: 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELK 369
D + +A K ++V + + + + C PVLF
Sbjct: 222 DSTVCLAD---------ADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYD 272
Query: 370 PSDDKPLFKLPYRIVIAVAT-----ENNILLYDTQ-----HASPFAFIANIHYTKLTDIT 419
+ K F + + D + A+ A + ++H ++ I+
Sbjct: 273 SAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQIS 332
Query: 420 WSSDGK----VLIASSTDGYCSI 438
S GK + DG SI
Sbjct: 333 VLSGGKAKCSQFCTTGMDGGMSI 355
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.5 bits (98), Expect = 1e-04
Identities = 41/297 (13%), Positives = 86/297 (28%), Gaps = 32/297 (10%)
Query: 9 SWHN--RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERES 66
++H+ +P+ KD I + V I+ + +
Sbjct: 1 AYHSFLVEPISCHAWN----KDRTQ-IAICPNNHEV--------------HIYEKSGNK- 40
Query: 67 GIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLS 126
+L H V V ++P+ + + + + +
Sbjct: 41 ----WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW----TLKGRTWKPTLVIL 92
Query: 127 RHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEEN-VNKEHWIVT 185
R +A VR++PN + A G I + + + D + V W
Sbjct: 93 RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN 152
Query: 186 KILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK 245
+L + + T + G+ + + +V GV +
Sbjct: 153 SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN 212
Query: 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFD-KVVPLFHDDTMKSF 301
VA +S D ++ K ++ LP+ + + + +V HD F
Sbjct: 213 GSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLF 269
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.6 bits (93), Expect = 5e-04
Identities = 20/117 (17%), Positives = 35/117 (29%), Gaps = 23/117 (19%)
Query: 128 HQKAVNVVRFSPNGELLASG-DDESTIIVWKQKTDQ-------DLPEFPSS--------- 170
+ V F L+A+G D + + + D+P+ S
Sbjct: 242 ETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF 301
Query: 171 -NLDEEN-VNKEHWIVTKILRGHLEDVYDISWSPTS----THLISGSVDNTAIMWDV 221
NLD++ + H V IS + + +D +WDV
Sbjct: 302 QNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 358
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 62.2 bits (149), Expect = 4e-11
Identities = 30/321 (9%), Positives = 77/321 (23%), Gaps = 25/321 (7%)
Query: 121 FASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKE 180
F S + V+ +P G+ + + +++ +
Sbjct: 9 FPSLPRTARGTAVVLGNTPAGDKIQYCNG-TSVYTV--------------PVGSLTD--- 50
Query: 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL--TEHKKFVQ 238
T+I H SP+ + SG V +WD + ++ V+
Sbjct: 51 ----TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVK 106
Query: 239 GVAWDPKNQYV-ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDT 297
++WD +++ + A + + + +S + +
Sbjct: 107 DISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGS 166
Query: 298 MKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSV 357
+ P P T V
Sbjct: 167 DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV 226
Query: 358 AVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTD 417
S + + + + + I +++ I +
Sbjct: 227 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ 286
Query: 418 ITWSSDGKVLIASSTDGYCSI 438
+ + L++ S +G+ +
Sbjct: 287 LGIIWTKQALVSISANGFINF 307
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 52.6 bits (124), Expect = 5e-08
Identities = 18/150 (12%), Positives = 37/150 (24%), Gaps = 7/150 (4%)
Query: 73 FASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAV 132
F S + V+ +P G+ + + + ++ + H
Sbjct: 9 FPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVP-------VGSLTDTEIYTEHSHQT 61
Query: 133 NVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHL 192
V + SP+G ASGD + +W + + + +K +
Sbjct: 62 TVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVG 121
Query: 193 EDVYDISWSPTSTHLISGSVDNTAIMWDVH 222
E S
Sbjct: 122 EGRERFGHVFLFDTGTSNGNLTGQARAMNS 151
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 44.5 bits (103), Expect = 2e-05
Identities = 38/275 (13%), Positives = 88/275 (32%), Gaps = 39/275 (14%)
Query: 68 IANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSR 127
+ ++ + H V + SP+G ASGD G + T + + I
Sbjct: 45 VGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGP 104
Query: 128 --------------------HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEF 167
+ + + +G + V + +
Sbjct: 105 VKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIIS 164
Query: 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL 227
S + + H + V+ + ++P + S D T ++++ G
Sbjct: 165 GSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKT 224
Query: 228 GI-------LTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVD 280
G+ H V G+ W P +A+ S+D++++ +++ + K +PV
Sbjct: 225 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK-----VEKTIPVG 279
Query: 281 SSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315
+ E D+ + + ++ S +G +
Sbjct: 280 TRIE--DQQLGIIWTKQ-----ALVSISANGFINF 307
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 40.7 bits (93), Expect = 3e-04
Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 20/82 (24%)
Query: 139 PNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198
P+G +AS + TI +W T + P G + +
Sbjct: 248 PDGTKIASASADKTIKIWNVATLKVEKTIPV--------------------GTRIEDQQL 287
Query: 199 SWSPTSTHLISGSVDNTAIMWD 220
T L+S S + +
Sbjct: 288 GIIWTKQALVSISANGFINFVN 309
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 61.4 bits (147), Expect = 8e-11
Identities = 9/73 (12%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 186 KILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL---TEHKKFVQGVAW 242
+I + + + DI P+ + L+ S D + ++ L +K + +
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF 64
Query: 243 DPKNQYVATLSSD 255
+ +
Sbjct: 65 IDNTDLQIYVGTV 77
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 56.0 bits (133), Expect = 6e-09
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 7/139 (5%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187
+ +V E A + + V + + +
Sbjct: 193 KYQIRDVALLPKEQEGYACSSIDGRVAVE------FFDDQGDDYNSSKRFAFRCHRLNLK 246
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247
V I +SP L + D W++ K + + + V +
Sbjct: 247 DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE-DSVVKIACSDN 305
Query: 248 YVATLSSDRSLRTYSIQSK 266
+ +SD + +T + +
Sbjct: 306 ILCLATSDDTFKTNAAIDQ 324
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.3 bits (113), Expect = 1e-06
Identities = 7/96 (7%), Positives = 24/96 (25%), Gaps = 18/96 (18%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187
+ ++ ++ P+ LL + ++ V+K +
Sbjct: 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL------------------LQ 51
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK 223
+ + ++ + I I+
Sbjct: 52 SLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.1 bits (102), Expect = 3e-05
Identities = 25/273 (9%), Positives = 64/273 (23%), Gaps = 46/273 (16%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 138
+ ++ ++ P+ LL G ++ + + NV+ L ++ + F
Sbjct: 10 PKDYISDIKIIPSKSLLLITSWDGSLTVY---KFDIQAKNVDLLQSLR-YKHPLLCCNFI 65
Query: 139 PNGE-LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWI-------------- 183
N + + G + I+ ++ + +
Sbjct: 66 DNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125
Query: 184 --------VTKILRGHLEDVYDISWSPTSTHLISGSV------DNTAIMWDVHKGKNLGI 229
I +L + T + S ++ + + ++
Sbjct: 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185
Query: 230 ----LTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHEL 285
+ + + A S D + + S
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ--------GDDYNSSKRFA 237
Query: 286 FDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318
F D + + FSP + L
Sbjct: 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG 270
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.4 bits (90), Expect = 0.001
Identities = 15/140 (10%), Positives = 39/140 (27%), Gaps = 39/140 (27%)
Query: 195 VYDISWSPTSTHLISGSVDNTAIMWDVHKG---------------KNLGILTEHKKFVQG 239
S+D + + T V
Sbjct: 197 RDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS 256
Query: 240 VAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMK 299
+ + P+++++ T SD + +++Q++K I K F++D++
Sbjct: 257 IEFSPRHKFLYTAGSDGIISCWNLQTRKKI------------------KNFAKFNEDSV- 297
Query: 300 SFFRRLTFSPDGQLLIAPSG 319
+ + +L +
Sbjct: 298 -----VKIACSDNILCLATS 312
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.7 bits (88), Expect = 0.002
Identities = 15/92 (16%), Positives = 21/92 (22%), Gaps = 20/92 (21%)
Query: 229 ILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDK 288
I K ++ + P + S D SL Y + K
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA--------------------K 45
Query: 289 VVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320
V L K F + L I
Sbjct: 46 NVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV 77
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.2 bits (141), Expect = 4e-10
Identities = 32/183 (17%), Positives = 56/183 (30%), Gaps = 21/183 (11%)
Query: 73 FASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQ-KA 131
S + + + P +A + L + +S + V + H
Sbjct: 9 IPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPV---VQFTGHGSSV 65
Query: 132 VNVVRFSP--NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR 189
V V+FSP + L SGD+ +IVW D++ V +
Sbjct: 66 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSV-------------EVNVKSEFQ 112
Query: 190 GHLEDVYDISWSPTSTHLI--SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247
+ DISW L DN + G +LG ++ H + +
Sbjct: 113 VLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRP 172
Query: 248 YVA 250
+
Sbjct: 173 MRS 175
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.4 bits (126), Expect = 3e-08
Identities = 35/336 (10%), Positives = 76/336 (22%), Gaps = 40/336 (11%)
Query: 121 FASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKE 180
S + + + P +A +S + D +P
Sbjct: 9 IPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQ----------- 57
Query: 181 HWIVTKILRGHLED-VYDISWSPT--STHLISGSVDNTAIMWDVHKGKNLGIL------- 230
GH V + +SP S +L SG I+W K +
Sbjct: 58 -------FTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSE 110
Query: 231 -TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKV 289
+ ++WD + + + R S ++ S +
Sbjct: 111 FQVLAGPISDISWDFEGRRLCV---VGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHL 167
Query: 290 VPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCL 349
+M G + + V
Sbjct: 168 KQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD 227
Query: 350 PSLQYYSVAVKCCPVLFELKPSDDKPLFKLPY----RIVIAVATENNILLYDTQHASP-- 403
+ + E + + V + I ++D +
Sbjct: 228 RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQ 287
Query: 404 -FAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSI 438
+ + + + +G+ +I+ S DG +
Sbjct: 288 KWTLDKQQLGNQQVGVVATGNGR-IISLSLDGTLNF 322
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.0 bits (112), Expect = 2e-06
Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 3/86 (3%)
Query: 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240
+ + ++ S + D T +WDV K + T K+ +
Sbjct: 240 FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQ 299
Query: 241 AWD---PKNQYVATLSSDRSLRTYSI 263
N + +LS D +L Y +
Sbjct: 300 QVGVVATGNGRIISLSLDGTLNFYEL 325
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.1 bits (141), Expect = 5e-10
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244
K+L+GH + V ++SGS DNT +W GK L L H V
Sbjct: 9 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD 67
Query: 245 KNQY 248
Sbjct: 68 NIII 71
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.1 bits (123), Expect = 1e-07
Identities = 49/344 (14%), Positives = 95/344 (27%), Gaps = 62/344 (18%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIV 184
L H V G + SG D++T+ VW T + L
Sbjct: 12 LKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCL-------------------- 50
Query: 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244
+ L GH V+ S + + + T +
Sbjct: 51 -RTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIH----TLYGHTSTVRCMHL 105
Query: 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSF--- 301
+ V + S D +LR + I++ + + V +VV +D +K +
Sbjct: 106 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 165
Query: 302 ------------FRRLTFSPDGQLLIAPSGCLENS--------DSTRKPISVTHVFTRAC 341
R + DG ++ SG L+ S + ++ T
Sbjct: 166 TETCLHTLQGHTNRVYSLQFDGIHVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 223
Query: 342 LNKPAVCLPSLQYYSVAV-------KCCPVLFELKPSDDKPLFKLPYRIVIAVATENNIL 394
K + + +V + + K + VI + + +
Sbjct: 224 ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVK 283
Query: 395 LYDTQ----HASPFAFIANIHYTKLTDITWSSDGKVLIASSTDG 434
L+D + + + + I S+ V S +G
Sbjct: 284 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 327
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (118), Expect = 4e-07
Identities = 36/239 (15%), Positives = 65/239 (27%), Gaps = 26/239 (10%)
Query: 77 LSRHQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVV 135
L H V G + SG D ++W + L H V
Sbjct: 12 LKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTG-------KCLRTLVGHTGGVWSS 63
Query: 136 RFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNL---------------DEENVNKE 180
+ N + S D + + +S + D +
Sbjct: 64 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 123
Query: 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240
+ ++SG+ D +WD L L H V +
Sbjct: 124 IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 183
Query: 241 AWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMK 299
+D +V + S D S+R + +++ I + + +V D T+K
Sbjct: 184 QFDGI--HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 240
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.7 bits (109), Expect = 5e-06
Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 50/197 (25%)
Query: 29 NCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88
+ +V+G D+ + + ++ + + T
Sbjct: 186 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-----------------------SLTSG 222
Query: 89 FSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG 147
+L SG+ +IW + + ++ ++HQ AV ++F+ N + +S
Sbjct: 223 MELKDNILVSGNADSTVKIWDIKTGQ----CLQTLQGPNKHQSAVTCLQFNKNFVITSSD 278
Query: 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL 207
D T+ +W KT + + T G V+ I S T
Sbjct: 279 D--GTVKLWDLKTGEFIRNLV----------------TLESGGSGGVVWRIRASNTKLVC 320
Query: 208 ISGSVDNTA----IMWD 220
GS + T ++ D
Sbjct: 321 AVGSRNGTEETKLLVLD 337
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 32/220 (14%), Positives = 67/220 (30%), Gaps = 19/220 (8%)
Query: 219 WDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLP 278
W + K+ +L H V + + S D +L+ +S + K +
Sbjct: 1 WRRGELKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 279 VDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFT 338
V SS + ++ D T+K + + + R
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 339 RACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDT 398
R + CL L + AV+C R V++ A + + ++D
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQY---------------DGRRVVSGAYDFMVKVWDP 164
Query: 399 QHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSI 438
+ + + + + DG +++ S D +
Sbjct: 165 ETETC---LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRV 201
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.1 bits (141), Expect = 5e-10
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247
LRGH+ V ++I+G+ D ++D K L L+ H V + +
Sbjct: 8 LRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI 66
Query: 248 YVA 250
V+
Sbjct: 67 LVS 69
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.2 bits (136), Expect = 2e-09
Identities = 41/363 (11%), Positives = 94/363 (25%), Gaps = 30/363 (8%)
Query: 77 LSRHQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVV 135
L H +V + +G D ++ ++ F LS H V +
Sbjct: 8 LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKK-------FLLQLSGHDGGVWAL 59
Query: 136 RFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLED- 194
+++ G +L SG + T+ VW K F N ++ + K + D
Sbjct: 60 KYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDN 118
Query: 195 ---VYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251
V+ + + +G+L H V+ V+ +
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 178
Query: 252 LSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311
+ + + I ++ + + D T++ +
Sbjct: 179 YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT 238
Query: 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPS 371
L + R S + +++
Sbjct: 239 LQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITT------FYV 292
Query: 372 DDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASS 431
D ++ +EN +Y+ + ++ + + ++ A
Sbjct: 293 SDN---------ILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVE 342
Query: 432 TDG 434
DG
Sbjct: 343 KDG 345
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 56.1 bits (133), Expect = 6e-09
Identities = 41/323 (12%), Positives = 88/323 (27%), Gaps = 32/323 (9%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIV 184
L H +V + +G D+ I V+ +
Sbjct: 8 LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKK---------------------F 45
Query: 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHK--KFVQGVAW 242
L GH V+ + ++ L+SGS D T +WD+ KG + H +
Sbjct: 46 LLQLSGHDGGVWALKYAHGGI-LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE 104
Query: 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRA----CRSKLPVDSSHELFDKVVPLFHDDTM 298
+Y+ T S D +L + + + + + + V H ++
Sbjct: 105 YKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV 164
Query: 299 KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVA 358
++ G +S + +
Sbjct: 165 RTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT 224
Query: 359 VKCCPV---LFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKL 415
++ + L L + + A+ ++ + H+T L
Sbjct: 225 IRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNL 284
Query: 416 TDITWSSDGKVLIASSTDGYCSI 438
+ IT ++ S ++ +I
Sbjct: 285 SAITTFYVSDNILVSGSENQFNI 307
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.5 bits (116), Expect = 6e-07
Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Query: 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLG-ILTEHKKFVQG 239
++ H ++ I+ S +++ +N ++++ GK + + + +
Sbjct: 270 ANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWS 329
Query: 240 VAWDPKNQYVATLSSDRSLR 259
V + K VA + D
Sbjct: 330 VNFKGKTL-VAAVEKDGQSF 348
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.6 bits (111), Expect = 3e-06
Identities = 11/77 (14%), Positives = 27/77 (35%), Gaps = 7/77 (9%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 139
H + F + +L SG + I+ L + +++ + + V F
Sbjct: 281 HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGK------LVHANILKDADQIWSVNFKG 334
Query: 140 NGELLASGDDESTIIVW 156
L+A+ + + +
Sbjct: 335 KT-LVAAVEKDGQSFLE 350
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.2 bits (110), Expect = 4e-06
Identities = 46/303 (15%), Positives = 104/303 (34%), Gaps = 42/303 (13%)
Query: 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91
++TG D + +++ ++ F LS H V ++++
Sbjct: 25 YVITGADDKMI--------------RVYDSINKK-------FLLQLSGHDGGVWALKYAH 63
Query: 92 NGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES 151
G L++ D +W + + + N + + +G ++
Sbjct: 64 GGILVSGSTDRTVRVWDIKKGCCTHVFEGH-----NSTVRCLDIVEYKNIKYIVTGSRDN 118
Query: 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS 211
T+ VWK + +P+ + + + + S ++SGS
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 178
Query: 212 VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISR 271
DNT I+WDV + K L IL+ H + +D + + + S D ++R + +++ +++
Sbjct: 179 YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT 238
Query: 272 ACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR----------------LTFSPDGQLLI 315
V +V D +++ + TF +L+
Sbjct: 239 LQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILV 298
Query: 316 APS 318
+ S
Sbjct: 299 SGS 301
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 54.4 bits (129), Expect = 2e-08
Identities = 30/259 (11%), Positives = 68/259 (26%), Gaps = 35/259 (13%)
Query: 68 IANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFAS--- 123
+ +S +++ SP+G+ + + + + + + A
Sbjct: 75 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 134
Query: 124 ----DLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN-LDEENVN 178
+ V ++R + +G L +G D + V K LP +
Sbjct: 135 AKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDV 194
Query: 179 KEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL-TEHKKFV 237
W + + + + D+ GK + +
Sbjct: 195 LYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELY 254
Query: 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDT 297
PK+ +R L Y ++ +K+I +D +
Sbjct: 255 FTGLRSPKDPNQIYGVLNR-LAKYDLKQRKLIKA-----ANLDHT--------------- 293
Query: 298 MKSFFRRLTFSPDGQLLIA 316
+ + F G L
Sbjct: 294 ----YYCVAFDKKGDKLYL 308
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 54.4 bits (129), Expect = 2e-08
Identities = 25/317 (7%), Positives = 57/317 (17%), Gaps = 43/317 (13%)
Query: 137 FSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVY 196
E + + + + V +D + +
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDT--------------------VYKSCVMPDKFGPG 43
Query: 197 DISWSPTSTHL-ISGSVDNTAIMWDVHKGKNLGILT------EHKKFVQGVAWDPKNQYV 249
+P + + + D+ KN E + + A P + V
Sbjct: 44 TAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEV 103
Query: 250 ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309
+ ++++ ++ M + +
Sbjct: 104 YATVNP---------TQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 154
Query: 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELK 369
DG L +A + T K + S E
Sbjct: 155 DGSLYVAGPDIYKMDVKTGKYTVALPLRNWNR------KGYSAPDVLYFWPHQSPRHEFS 208
Query: 370 PSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIA 429
FK + L D + S
Sbjct: 209 MLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-NQI 267
Query: 430 SSTDGYCSIISFGDNEI 446
+ ++
Sbjct: 268 YGVLNRLAKYDLKQRKL 284
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 15/170 (8%), Positives = 32/170 (18%), Gaps = 23/170 (13%)
Query: 198 ISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT-EHKKFVQGVAWDPKNQYV-ATLSSD 255
+ ++I + N + DV K P N+ +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 256 RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315
+ + + K + SPDG+ +
Sbjct: 62 GDIYGIDLDTCKN-----------------TFHANLSSVPGEVGRSMYSFAISPDGKEVY 104
Query: 316 ----APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKC 361
++ + V Q Y +
Sbjct: 105 ATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 154
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 39.7 bits (91), Expect = 8e-04
Identities = 9/106 (8%), Positives = 26/106 (24%), Gaps = 23/106 (21%)
Query: 126 SRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVT 185
+ + SP G + + + K + ++
Sbjct: 248 ADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRK--------------------LIK 286
Query: 186 KILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT 231
H Y +++ L G N +++ + + +
Sbjct: 287 AANLDH--TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 330
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.2 bits (128), Expect = 2e-08
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 9/66 (13%)
Query: 184 VTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD 243
V K + GH + + ++ +P LISGS D + W +H + +
Sbjct: 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDNS 55
Query: 244 PKNQYV 249
+Y
Sbjct: 56 KAQEYS 61
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.0 bits (117), Expect = 4e-07
Identities = 39/314 (12%), Positives = 81/314 (25%), Gaps = 39/314 (12%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIV 184
+S H K + + +P L SG + I+ W
Sbjct: 9 ISGHNKGITALTVNP----LISGSYDGRIMEWS--------------------------S 38
Query: 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244
+ + + H + + S + I WD N E + + +
Sbjct: 39 SSMHQDHSNLIVSLDNSKAQEYSS--------ISWDDTLKVNGITKHEFGSQPKVASANN 90
Query: 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304
+ D L S + S S S + + V +
Sbjct: 91 DGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSD 150
Query: 305 LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPV 364
L S D + + + + I+ V + L ++
Sbjct: 151 LEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINA 210
Query: 365 LFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDG 424
+ ++ +V + + NI +Y + N H + ++ W +
Sbjct: 211 ISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS 270
Query: 425 KVLIASSTDGYCSI 438
L++S D
Sbjct: 271 T-LVSSGADACIKR 283
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.6 bits (116), Expect = 4e-07
Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 21/94 (22%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187
+L+A+G ++ I ++ K + K
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKI--------------------IKA 253
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDV 221
L H + V ++ W ST L+S D W+V
Sbjct: 254 LNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.6 bits (90), Expect = 7e-04
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 138
+L+A+G I+ + I L+ H+ VN + +
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA------LNAHKDGVNNLLWE 267
Query: 139 PNGELLASGDDESTIIVWK 157
L++SG D + I W
Sbjct: 268 TPSTLVSSGAD-ACIKRWN 285
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 50.2 bits (119), Expect = 4e-07
Identities = 28/212 (13%), Positives = 59/212 (27%), Gaps = 19/212 (8%)
Query: 48 KIPHRLKTGKIWYLTERESG-IANVEFASD--LSRHQ--KAVNVVRFSPNGELLASGDDV 102
+ + ++ +T R++G IA ++ ++ + AV++ R S +G L
Sbjct: 23 QQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRD 82
Query: 103 GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL-ASGDDESTIIVWKQKTD 161
GK + V S + + A ++ +T
Sbjct: 83 GKVNMIDLWMKEPTT-VAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 141
Query: 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI-SGSVDNTAIMWD 220
+ + V I S I + ++ D
Sbjct: 142 EPKKIQS----------TRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVD 191
Query: 221 VHKGKNLGILT-EHKKFVQGVAWDPKNQYVAT 251
NL ++F+ D ++Y T
Sbjct: 192 YTDLNNLKTTEISAERFLHDGGLDGSHRYFIT 223
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 42.9 bits (100), Expect = 9e-05
Identities = 27/224 (12%), Positives = 62/224 (27%), Gaps = 34/224 (15%)
Query: 103 GKEIWYLTERESG-IANVEFASD--LSRHQ--KAVNVVRFSPNGELLASGDDESTIIVWK 157
+ ++ +T R++G IA ++ ++ + AV++ R S +G L + + +
Sbjct: 30 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMID 89
Query: 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI-SGSVDNTA 216
+ KI + I
Sbjct: 90 LWMKEPTTVAE----------------IKIGSEARSIETSKMEGWEDKYAIAGAYWPPQY 133
Query: 217 IMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS-DRSLRTYSIQSKKVISRACRS 275
++ D + I + + P+ + A L+S R +++ I
Sbjct: 134 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL---- 189
Query: 276 KLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSG 319
VD + K + + F + I +
Sbjct: 190 ---VDYTDLNNLKTTEISAER----FLHDGGLDGSHRYFITAAN 226
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.7 bits (114), Expect = 8e-07
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 14/77 (18%)
Query: 144 LASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT 203
+ SG + I VW D + + L H V+ + +
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAP------------AGTLCLRTLVEHSGRVFRLQFDEF 278
Query: 204 STHLISGSVDNTAIMWD 220
++S S D+T ++WD
Sbjct: 279 --QIVSSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.7 bits (114), Expect = 1e-06
Identities = 20/136 (14%), Positives = 41/136 (30%), Gaps = 34/136 (25%)
Query: 133 NVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHL 192
+ L+ SG ++TI +W + L + ++
Sbjct: 180 GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK---------- 229
Query: 193 EDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN---------LGILTEHKKFVQGVAWD 243
++SG+ D +WD+ + L L EH V + +D
Sbjct: 230 -------------RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 276
Query: 244 PKNQYVATLSSDRSLR 259
+ + S D ++
Sbjct: 277 EF--QIVSSSHDDTIL 290
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (111), Expect = 2e-06
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 186 KILRGHLEDVYDI-SWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244
+ + E + ++SG DNT +WD + + ILT H V + +D
Sbjct: 6 QRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE 65
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.7 bits (101), Expect = 3e-05
Identities = 33/242 (13%), Positives = 71/242 (29%), Gaps = 30/242 (12%)
Query: 77 LSRHQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVV 135
S K V + + + SG +IW E L+ H +V +
Sbjct: 11 RSETSKGVYC--LQYDDQKIVSGLRDNTIKIWDKNTL-------ECKRILTGHTGSVLCL 61
Query: 136 RFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWI------------ 183
++ + S D + + + N +
Sbjct: 62 QYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 121
Query: 184 ------VTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFV 237
+T +++S S D T +W+ + + L HK+ +
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI 181
Query: 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDT 297
+ + + V + SSD ++R + I+ + + V ++V +D
Sbjct: 182 ACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGK 239
Query: 298 MK 299
+K
Sbjct: 240 IK 241
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 47.5 bits (111), Expect = 3e-06
Identities = 26/192 (13%), Positives = 51/192 (26%), Gaps = 9/192 (4%)
Query: 56 GKIWYLTERESGIANV-EFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERES 114
G + + G + + +N +S L GK
Sbjct: 168 GSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSS-- 225
Query: 115 GIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDE 174
+ +F + +A + P G + I + +S
Sbjct: 226 --GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVV 283
Query: 175 ENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI--SGSVDNTAIMWDVHKGKNLGILTE 232
K + K GH ++ I+ S L+ + D T + D G+ L + +
Sbjct: 284 VLDAKTGERLAKFEMGH--EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 341
Query: 233 HKKFVQGVAWDP 244
Q +
Sbjct: 342 LGHGPQVITTAD 353
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 44.6 bits (104), Expect = 2e-05
Identities = 12/178 (6%), Positives = 43/178 (24%), Gaps = 12/178 (6%)
Query: 56 GKIWYLTERESGIANVEFASD-LSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERES 114
+ + A + + + + G L+ + + + +
Sbjct: 185 ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVAS------SILQGDI 238
Query: 115 GIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDE 174
A + + ++ F G + + + I+ + N
Sbjct: 239 PAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSS 298
Query: 175 ENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI--SGSVDNTAIMWDVHKGKNLGIL 230
V + + + D I + + + ++D ++ +
Sbjct: 299 --VTASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 37.7 bits (86), Expect = 0.003
Identities = 23/262 (8%), Positives = 49/262 (18%), Gaps = 25/262 (9%)
Query: 201 SPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ-------GVAWDPKNQYVA-TL 252
S + G + ++D + + + + + L
Sbjct: 83 STSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFL 142
Query: 253 SSDRSLRTYSIQSKKVISR----ACRSKLPVDSSHELFDK------VVPLFHDDTMKSFF 302
+ S+ +C P ++ L
Sbjct: 143 FGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIV 202
Query: 303 RRLTFSPDGQLLIAPSGCLENS--DSTRKPISVTHVFT-RACLNKPAVCLPSLQYYSVAV 359
A + I + A + S +
Sbjct: 203 GAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFR 262
Query: 360 KCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDIT 419
+ + D + +A N I+N H + I
Sbjct: 263 SAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDS--DAII 320
Query: 420 WSSDGK--VLIASSTDGYCSII 439
+ DG S+ I
Sbjct: 321 AAQDGASDNYANSAGTEVLDIY 342
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 42.9 bits (99), Expect = 8e-05
Identities = 28/326 (8%), Positives = 65/326 (19%), Gaps = 49/326 (15%)
Query: 142 ELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS 201
+ + + ++V + + +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVIT-------------------IADAGPTPMVPMVA 42
Query: 202 PTSTHL-ISGSVDNTAIMWDVHKGKNLGILTEHK-----KFVQGVAWDPKNQYVATLSSD 255
P + + + + D+ G+ LG + K + G A P + +A S
Sbjct: 43 PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESP 102
Query: 256 RSL------------RTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303
L Y ++ + + + D
Sbjct: 103 VRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE 162
Query: 304 RLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLN----------KPAVCLPSLQ 353
T D + + D A P L
Sbjct: 163 AGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLL 222
Query: 354 YYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYT 413
+ + + A N + +D + + +
Sbjct: 223 TMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVP--LPH 280
Query: 414 KLTDITWSSDGKVLIASSTDGYCSII 439
+ S+DG + G +
Sbjct: 281 SYYSVNVSTDGSTVWLGGALGDLAAY 306
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 42.1 bits (97), Expect = 1e-04
Identities = 6/53 (11%), Positives = 14/53 (26%)
Query: 190 GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAW 242
Y ++ S + + G +D + G + +A
Sbjct: 277 PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLAS 329
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 42.2 bits (98), Expect = 1e-04
Identities = 27/247 (10%), Positives = 62/247 (25%), Gaps = 35/247 (14%)
Query: 179 KEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ 238
+E W V + + ++ + D K + ++ V
Sbjct: 8 RESWKVL-VKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VH 65
Query: 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298
+Y+ + D + + +K+ A ++ +
Sbjct: 66 ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA---EIKIGIEAR-------------- 108
Query: 299 KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVA 358
S + + IA + P + K V + +
Sbjct: 109 -SVESSKFKGYEDRYTIAGAYW---------PPQFAIMDGETLEPKQIVSTRGMTVDTQT 158
Query: 359 VKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDI 418
P + + S + P F ++ V +LL + + + L D
Sbjct: 159 YHPEPRVAAIIASHEHPEF------IVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADG 212
Query: 419 TWSSDGK 425
W S +
Sbjct: 213 GWDSSHR 219
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 39.2 bits (90), Expect = 0.001
Identities = 20/169 (11%), Positives = 41/169 (24%), Gaps = 12/169 (7%)
Query: 82 KAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 141
AV++ R S +G L + + E + +
Sbjct: 62 YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYED 120
Query: 142 ELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS 201
+G + ++ V+ V V I S
Sbjct: 121 RYTIAGAYWPPQFAIMDGETLEP---------KQIVSTRGMTVDTQTYHPEPRVAAIIAS 171
Query: 202 PTSTHLISGSVDNTAI-MWDVHKGKNLGILT-EHKKFVQGVAWDPKNQY 248
I + + + + NL + + F+ WD ++Y
Sbjct: 172 HEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRY 220
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 621 | |||
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.98 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.97 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.97 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.97 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.97 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.96 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.96 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.96 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.96 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.94 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.94 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.93 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.92 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.91 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.89 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.89 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.87 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.84 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.84 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.83 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.81 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.8 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.73 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.71 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.66 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.66 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.63 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.59 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.57 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.42 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.41 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.34 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 99.22 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.21 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.19 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.16 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.11 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.06 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.01 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.99 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.96 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.93 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.92 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.9 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.87 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.86 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.8 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.7 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.34 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.29 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.24 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 98.07 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.84 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.64 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.51 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.26 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.23 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 97.22 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 97.21 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.18 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 96.92 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 96.91 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 96.9 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.84 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 96.84 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 96.77 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.6 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.31 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 96.06 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 95.9 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.17 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.09 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.0 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 94.98 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 94.93 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 93.97 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 93.92 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 93.48 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 91.75 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 91.0 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 90.87 |
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-41 Score=332.52 Aligned_cols=289 Identities=18% Similarity=0.289 Sum_probs=246.5
Q ss_pred eecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 9 SWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 9 ~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
.+.|.++|+||+|+|+++ +||+|+ ||.|+ |||+........ .......+|.+.|.+++
T Consensus 47 ~~~H~~~V~~v~fs~~g~-----~latg~-dg~V~--------------iWd~~~~~~~~~--~~~~~~~~h~~~I~~v~ 104 (337)
T d1gxra_ 47 TLNHGEVVCAVTISNPTR-----HVYTGG-KGCVK--------------VWDISHPGNKSP--VSQLDCLNRDNYIRSCK 104 (337)
T ss_dssp EECCSSCCCEEEECSSSS-----EEEEEC-BSEEE--------------EEETTSTTCCSC--SEEEECSCTTSBEEEEE
T ss_pred ECCCCCcEEEEEECCCCC-----EEEEEE-CCEEE--------------EEEccCCcccce--eEEeeecCCCCcEEEEE
Confidence 447999999999999999 999998 89999 888776543322 11223567999999999
Q ss_pred EccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCC
Q psy15549 89 FSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEF 167 (621)
Q Consensus 89 ~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~ 167 (621)
|+|+|++|++|+ |+.|++|++..... .....+..|...|.+++|+|++.++++++.|+.|++|++.+++.
T Consensus 105 ~s~dg~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~---- 175 (337)
T d1gxra_ 105 LLPDGCTLIVGGEASTLSIWDLAAPTP-----RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL---- 175 (337)
T ss_dssp ECTTSSEEEEEESSSEEEEEECCCC-------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE----
T ss_pred EcCCCCEEEEeeccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccc----
Confidence 999999999987 88899999876532 44566778999999999999999999999999999999988764
Q ss_pred CCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC
Q psy15549 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247 (621)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~ 247 (621)
.....+|...|.+++|++++..+++++.|+.|++||+++++.+..+ .|...|.+++|+|+++
T Consensus 176 -----------------~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~-~~~~~i~~l~~~~~~~ 237 (337)
T d1gxra_ 176 -----------------VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGE 237 (337)
T ss_dssp -----------------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSS
T ss_pred -----------------cccccccccccccccccccccccccccccccccccccccceeeccc-ccccceEEEEEccccc
Confidence 3566789999999999999999999999999999999999988777 4788999999999999
Q ss_pred EEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCC
Q psy15549 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDST 327 (621)
Q Consensus 248 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~ 327 (621)
+|++++.|+.|++||+++++..... .+...|.+++|+|++++|++++
T Consensus 238 ~l~~~~~d~~i~i~d~~~~~~~~~~------------------------~~~~~i~~v~~s~~g~~l~s~s--------- 284 (337)
T d1gxra_ 238 WLAVGMESSNVEVLHVNKPDKYQLH------------------------LHESCVLSLKFAYCGKWFVSTG--------- 284 (337)
T ss_dssp EEEEEETTSCEEEEETTSSCEEEEC------------------------CCSSCEEEEEECTTSSEEEEEE---------
T ss_pred ccceecccccccccccccccccccc------------------------ccccccceEEECCCCCEEEEEe---------
Confidence 9999999999999999887654332 3345678899999887776644
Q ss_pred CcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEE
Q psy15549 328 RKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFI 407 (621)
Q Consensus 328 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 407 (621)
.|+.|++||+.+++.+..+
T Consensus 285 -------------------------------------------------------------~Dg~i~iwd~~~~~~~~~~ 303 (337)
T d1gxra_ 285 -------------------------------------------------------------KDNLLNAWRTPYGASIFQS 303 (337)
T ss_dssp -------------------------------------------------------------TTSEEEEEETTTCCEEEEE
T ss_pred -------------------------------------------------------------CCCeEEEEECCCCCEEEEc
Confidence 7889999999999988776
Q ss_pred ecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 408 ANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 408 ~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
. |...|++++|+|+|++|++|+.||+|+|||+-
T Consensus 304 ~--~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl~ 336 (337)
T d1gxra_ 304 K--ESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp E--CSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred c--CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 3 78899999999999999999999999999973
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.1e-39 Score=316.76 Aligned_cols=296 Identities=19% Similarity=0.277 Sum_probs=242.0
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
+.+...+++.+.+++++|+|+ .||+++ ++.|. +|++.+...... +.+|.+.|+
T Consensus 10 ~~~p~~~r~~~~~~a~~~~g~-----~l~~~~-~~~v~--------------i~~~~~~~~~~~-------~~~H~~~v~ 62 (311)
T d1nr0a1 10 PSLPRTARGTAVVLGNTPAGD-----KIQYCN-GTSVY--------------TVPVGSLTDTEI-------YTEHSHQTT 62 (311)
T ss_dssp CCCCCCCTTCCCCCEECTTSS-----EEEEEE-TTEEE--------------EEETTCSSCCEE-------ECCCSSCEE
T ss_pred cCCCCCCCCCeEEEEEcCCCC-----EEEEEe-CCEEE--------------EEECCCCceeEE-------EcCCCCCEE
Confidence 344455667788999999998 888886 44577 999887655433 789999999
Q ss_pred EEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC--CCcEEEEEccCCC
Q psy15549 86 VVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD--ESTIIVWKQKTDQ 162 (621)
Q Consensus 86 ~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~--dg~i~vwd~~~~~ 162 (621)
+++|+|+|++||+|+ |+.|+||++..... .....+..|...|.+++|+|++++|++++. +..++||++++++
T Consensus 63 ~~~~sp~g~~latg~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~ 137 (311)
T d1nr0a1 63 VAKTSPSGYYCASGDVHGNVRIWDTTQTTH-----ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT 137 (311)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEESSSTTC-----CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC
T ss_pred EEEEeCCCCeEeccccCceEeeeeeecccc-----ccccccccccCcccccccccccccccccccccccccccccccccc
Confidence 999999999999998 89999999987642 233457789999999999999999999885 4569999999887
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTH-LISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~-l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 241 (621)
.. ..+.+|...|++++|+|++++ |++|+.|+.|++||+++++....+..|...|.++.
T Consensus 138 ~~---------------------~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~ 196 (311)
T d1nr0a1 138 SN---------------------GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVR 196 (311)
T ss_dssp BC---------------------BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEE
T ss_pred cc---------------------ccccccccccccccccccceeeecccccccccccccccccccccccccccccccccc
Confidence 64 456789999999999999875 78899999999999999999999999999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccc
Q psy15549 242 WDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCL 321 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~ 321 (621)
|+|++++|++++.|+.|++||+.++..+..+..... ....|...|.+++|+|++++|++++
T Consensus 197 ~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~----------------~~~~h~~~V~~~~~s~~~~~l~tgs--- 257 (311)
T d1nr0a1 197 YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL----------------KNVAHSGSVFGLTWSPDGTKIASAS--- 257 (311)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS----------------SSCSSSSCEEEEEECTTSSEEEEEE---
T ss_pred cCcccccccccccccccccccccccccccccccccc----------------ccccccccccccccCCCCCEEEEEe---
Confidence 999999999999999999999999887766542211 1224556788888888887776544
Q ss_pred cCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC
Q psy15549 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA 401 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 401 (621)
.||.|+|||+.++
T Consensus 258 -------------------------------------------------------------------~Dg~v~iwd~~t~ 270 (311)
T d1nr0a1 258 -------------------------------------------------------------------ADKTIKIWNVATL 270 (311)
T ss_dssp -------------------------------------------------------------------TTSEEEEEETTTT
T ss_pred -------------------------------------------------------------------CCCeEEEEECCCC
Confidence 7899999999999
Q ss_pred ceeEEEecccc--cceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 402 SPFAFIANIHY--TKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 402 ~~~~~~~~~h~--~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
+++..+...+. ..+.++.| ++++|++++.||.|++||.+
T Consensus 271 ~~~~~l~~~~~~~~~~~~~~~--~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 271 KVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPE 311 (311)
T ss_dssp EEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETT
T ss_pred cEEEEEECCCCccceEEEEEe--cCCEEEEEECCCEEEEEeCC
Confidence 98888754332 23445555 56689999999999999964
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.4e-39 Score=314.75 Aligned_cols=285 Identities=20% Similarity=0.367 Sum_probs=252.8
Q ss_pred eeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 8 ISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 8 ~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
.+.+|.++|++|+|+|+++ +||||+.||.|+ |||+.+++... .+.+|...|.++
T Consensus 12 ~L~GH~~~I~~l~~sp~~~-----~l~s~s~Dg~i~--------------iWd~~~~~~~~-------~~~~h~~~V~~~ 65 (317)
T d1vyhc1 12 ALSGHRSPVTRVIFHPVFS-----VMVSASEDATIK--------------VWDYETGDFER-------TLKGHTDSVQDI 65 (317)
T ss_dssp EEECCSSCEEEEEECSSSS-----EEEEEESSSCEE--------------EEETTTCCCCE-------EECCCSSCEEEE
T ss_pred EEcCCCCCeEEEEEcCCCC-----EEEEEeCCCeEE--------------EEECCCCCEEE-------EEeCCCCcEEEE
Confidence 4567999999999999998 999999999999 99988776543 488999999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
+|+|++.+++++. +..+.+|+.... .....+.+|...+.++.|+|+++.+++++.|+.+++||+.++...
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-- 136 (317)
T d1vyhc1 66 SFDHSGKLLASCSADMTIKLWDFQGF-------ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV-- 136 (317)
T ss_dssp EECTTSSEEEEEETTSCCCEEETTSS-------CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE--
T ss_pred eeeccccccccccccccccccccccc-------ccccccccccccceeeeccCCCceEEeeccCcceeEeecccceee--
Confidence 9999999999988 777888887765 556667889999999999999999999999999999999988743
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCC
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKN 246 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~ 246 (621)
..+.+|...+.+++|+|++++|++++.|+.|++|++.+++.+..+..|...+.+++|+|++
T Consensus 137 -------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 197 (317)
T d1vyhc1 137 -------------------KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPES 197 (317)
T ss_dssp -------------------EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSC
T ss_pred -------------------eEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeecc
Confidence 6678899999999999999999999999999999999999999999999999999998763
Q ss_pred --------------------CEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeee
Q psy15549 247 --------------------QYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLT 306 (621)
Q Consensus 247 --------------------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 306 (621)
.++++++.|+.|++||+.+++.+..+.. +...|.+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-----------------------~~~~v~~~~ 254 (317)
T d1vyhc1 198 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-----------------------HDNWVRGVL 254 (317)
T ss_dssp GGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC-----------------------CSSCEEEEE
T ss_pred ccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeC-----------------------CCCCEEEEE
Confidence 4688999999999999999988877653 334568889
Q ss_pred ecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEE
Q psy15549 307 FSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIA 386 (621)
Q Consensus 307 ~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (621)
|+|++++|++++
T Consensus 255 ~~~~~~~l~s~~-------------------------------------------------------------------- 266 (317)
T d1vyhc1 255 FHSGGKFILSCA-------------------------------------------------------------------- 266 (317)
T ss_dssp ECSSSSCEEEEE--------------------------------------------------------------------
T ss_pred ECCCCCEEEEEE--------------------------------------------------------------------
Confidence 998887776654
Q ss_pred EEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 387 VATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 387 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
.||.|++||+.+++++..+. +|...|++++|+|++++|++|+.||+|+|||
T Consensus 267 --~dg~i~iwd~~~~~~~~~~~-~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 267 --DDKTLRVWDYKNKRCMKTLN-AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp --TTTEEEEECCTTSCCCEEEE-CCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred --CCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 78999999999999998884 6999999999999999999999999999996
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-39 Score=318.89 Aligned_cols=287 Identities=14% Similarity=0.211 Sum_probs=246.8
Q ss_pred cccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy15549 79 RHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 79 ~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~ 158 (621)
.|...|.+++|+|+|++||+|+|+.|+||++........ .......+|...|.+++|+|++++|++|+.||.|++||+
T Consensus 49 ~H~~~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~~--~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~ 126 (337)
T d1gxra_ 49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSP--VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSC--SEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred CCCCcEEEEEECCCCCEEEEEECCEEEEEEccCCcccce--eEEeeecCCCCcEEEEEEcCCCCEEEEeecccccccccc
Confidence 799999999999999999999999999999987543211 122334579999999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceE
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ 238 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 238 (621)
...... ....+..|...+.+++|+|++.++++++.|+.|++|++.+++.......|...|.
T Consensus 127 ~~~~~~-------------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~ 187 (337)
T d1gxra_ 127 AAPTPR-------------------IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS 187 (337)
T ss_dssp CCC--E-------------------EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred cccccc-------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 765432 2356678999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 239 ~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
+++|++++.++++++.|+.|++||+++++.+..+. +...|.+++|+|++++|++++
T Consensus 188 ~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~------------------------~~~~i~~l~~~~~~~~l~~~~ 243 (337)
T d1gxra_ 188 CIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD------------------------FTSQIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------------------------CSSCEEEEEECTTSSEEEEEE
T ss_pred cccccccccccccccccccccccccccceeecccc------------------------cccceEEEEEcccccccceec
Confidence 99999999999999999999999999988766542 234568888888877776544
Q ss_pred ccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeC
Q psy15549 319 GCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDT 398 (621)
Q Consensus 319 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 398 (621)
.|+.|++||+
T Consensus 244 ----------------------------------------------------------------------~d~~i~i~d~ 253 (337)
T d1gxra_ 244 ----------------------------------------------------------------------ESSNVEVLHV 253 (337)
T ss_dssp ----------------------------------------------------------------------TTSCEEEEET
T ss_pred ----------------------------------------------------------------------cccccccccc
Confidence 6788999999
Q ss_pred CCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccH
Q psy15549 399 QHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSA 478 (621)
Q Consensus 399 ~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 478 (621)
.+++.... ..|...|++++|+|+|++|++++.||.|++||+.+++.+..+. +...+..+.++++++.+++++.|+.|
T Consensus 254 ~~~~~~~~--~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~s~D~~I 330 (337)
T d1gxra_ 254 NKPDKYQL--HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp TSSCEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred cccccccc--cccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 88876544 3589999999999999999999999999999999998876654 55678888999999999999999999
Q ss_pred HHhcc
Q psy15549 479 EQAKG 483 (621)
Q Consensus 479 ~~w~~ 483 (621)
++|++
T Consensus 331 ~vWdl 335 (337)
T d1gxra_ 331 TVYEV 335 (337)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99985
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.5e-39 Score=314.66 Aligned_cols=306 Identities=18% Similarity=0.308 Sum_probs=268.6
Q ss_pred cccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcE
Q psy15549 75 SDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTI 153 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i 153 (621)
..|.||.+.|++|+|+|++++|++|+ |+.|+||++..+ .....+.+|...|.+++|+|++.+++++..++.+
T Consensus 11 ~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~-------~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~ 83 (317)
T d1vyhc1 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-------DFERTLKGHTDSVQDISFDHSGKLLASCSADMTI 83 (317)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC-------CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCC
T ss_pred EEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------CEEEEEeCCCCcEEEEeeeccccccccccccccc
Confidence 35899999999999999999999998 889999999877 6677888999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH 233 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 233 (621)
.+|+....... ..+.+|...+.++.|+|+++.+++++.|+.+++||+++++.+..+..|
T Consensus 84 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 142 (317)
T d1vyhc1 84 KLWDFQGFECI---------------------RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 142 (317)
T ss_dssp CEEETTSSCEE---------------------ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred ccccccccccc---------------------cccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccC
Confidence 99998877643 556789999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 234 KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
...+.+++|+|++.+|++++.|+.|++|++.+++....+.. +...+.++.|+|++..
T Consensus 143 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~-----------------------~~~~i~~~~~~~~~~~ 199 (317)
T d1vyhc1 143 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-----------------------HRHVVECISWAPESSY 199 (317)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-----------------------CSSCEEEEEECCSCGG
T ss_pred CCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEec-----------------------CCCCceEEEEeecccc
Confidence 99999999999999999999999999999999887776643 3445688999998876
Q ss_pred EEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcE
Q psy15549 314 LIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNI 393 (621)
Q Consensus 314 l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 393 (621)
+.... ..+.... ....++..+++++.|+.|
T Consensus 200 ~~~~~-----~~~~~~~---------------------------------------------~~~~~~~~~~~~~~d~~i 229 (317)
T d1vyhc1 200 SSISE-----ATGSETK---------------------------------------------KSGKPGPFLLSGSRDKTI 229 (317)
T ss_dssp GGGGG-----CCSCC----------------------------------------------------CCEEEEEETTSEE
T ss_pred ceeec-----cccceee---------------------------------------------eeccCCceeEeccCCCEE
Confidence 65443 1111111 111245778999999999
Q ss_pred EEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCC
Q psy15549 394 LLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSED 473 (621)
Q Consensus 394 ~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 473 (621)
++||+.+++++..+. +|...|++++|+|++++|++|+.||.|++||+.+++++..+..|...+..+.+++++..+++++
T Consensus 230 ~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s 308 (317)
T d1vyhc1 230 KMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 308 (317)
T ss_dssp EEEETTTTEEEEEEE-CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEE
T ss_pred EEEECCCCcEEEEEe-CCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 999999999998884 6999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHhc
Q psy15549 474 KPRSAEQAK 482 (621)
Q Consensus 474 ~~~~~~~w~ 482 (621)
.|+.|++|+
T Consensus 309 ~Dg~i~iWd 317 (317)
T d1vyhc1 309 VDQTVKVWE 317 (317)
T ss_dssp TTSEEEEEC
T ss_pred CCCeEEEeC
Confidence 999999995
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.6e-38 Score=317.93 Aligned_cols=335 Identities=19% Similarity=0.314 Sum_probs=255.3
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEcCCceEEEEecc
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTE 111 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~ 111 (621)
....+..++.+. +|+........ ..+.. ..+|.+.|+||+|+|||++||+|+|+.|+||++..
T Consensus 30 ~~~~~~~~~~~~--------------~~~~~~~~~~~--~~l~~-~~~H~~~V~~l~fs~dg~~lasg~d~~i~iW~~~~ 92 (388)
T d1erja_ 30 DALKKQTNDYYI--------------LYNPALPREID--VELHK-SLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSD 92 (388)
T ss_dssp TTSEEECSSCEE--------------EECTTSCCCEE--EEEEE-EEECSSCCCEEEECTTSSEEEEECBSCEEEEETTT
T ss_pred cccccCCCCcEE--------------EeCCCCCccee--eeeEe-eCCCCCcEEEEEECCCCCEEEEEeCCeEEEEEecc
Confidence 345666777777 77755443221 12222 34699999999999999999999999999999976
Q ss_pred Cccccc-----------cceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCccccccccc
Q psy15549 112 RESGIA-----------NVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKE 180 (621)
Q Consensus 112 ~~~~~~-----------~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 180 (621)
+..... ..........|...|++++|+|++++|++|+.||.|++||...++..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~---------------- 156 (388)
T d1erja_ 93 GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIV---------------- 156 (388)
T ss_dssp CCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE----------------
T ss_pred cceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcceecccccccccccccccccc----------------
Confidence 531100 00011223457788999999999999999999999999999887643
Q ss_pred ceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEE
Q psy15549 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRT 260 (621)
Q Consensus 181 ~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~i 260 (621)
....+|...|.+++|++++..+++++.++.+++||+.+.........+...+....+.+++++|++++.||.|++
T Consensus 157 -----~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i 231 (388)
T d1erja_ 157 -----MILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRV 231 (388)
T ss_dssp -----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEE
T ss_pred -----cccccccccccccccccccccccccccceeeeeeeccccccccccccccccccccccCCCCCeEEEEcCCCeEEE
Confidence 566789999999999999999999999999999999998888777666555544444558899999999999999
Q ss_pred EEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeec
Q psy15549 261 YSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRA 340 (621)
Q Consensus 261 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~ 340 (621)
||+.++.....+..... ....+...|.+++|+|++++|++++ .|+.+++|++.......
T Consensus 232 ~~~~~~~~~~~~~~~~~----------------~~~~h~~~v~~l~~s~~~~~l~s~~-----~d~~i~iwd~~~~~~~~ 290 (388)
T d1erja_ 232 WDSETGFLVERLDSENE----------------SGTGHKDSVYSVVFTRDGQSVVSGS-----LDRSVKLWNLQNANNKS 290 (388)
T ss_dssp EETTTCCEEEEEC----------------------CCCSSCEEEEEECTTSSEEEEEE-----TTSEEEEEEC-------
T ss_pred eecccCccceeeccccc----------------cccCCCCCEEEEEECCCCCEEEEEE-----CCCcEEEEeccCCcccc
Confidence 99999887776542211 1234566789999999999999998 89999999986543322
Q ss_pred cc-----CCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccce
Q psy15549 341 CL-----NKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKL 415 (621)
Q Consensus 341 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v 415 (621)
.. .........+...+.++.|+| ++.+|++++.||.|++||+.+++++..+ .+|.+.|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~----------------~~~~l~sg~~dg~i~vwd~~~~~~~~~l-~~H~~~V 353 (388)
T d1erja_ 291 DSKTPNSGTCEVTYIGHKDFVLSVATTQ----------------NDEYILSGSKDRGVLFWDKKSGNPLLML-QGHRNSV 353 (388)
T ss_dssp --------CEEEEEECCSSCEEEEEECG----------------GGCEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCE
T ss_pred ccccccccceeeecccccceEEEEEECC----------------CCCEEEEEeCCCEEEEEECCCCcEEEEE-eCCCCCE
Confidence 11 112233445666777777776 6789999999999999999999999988 4699999
Q ss_pred EEEE------EcCCCCeEEEEeCCCcEEEEEec
Q psy15549 416 TDIT------WSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 416 ~~~~------~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
++++ |+|++++||||+.||+|+||+++
T Consensus 354 ~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 354 ISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp EEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence 9997 46789999999999999999985
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.8e-38 Score=315.50 Aligned_cols=248 Identities=18% Similarity=0.247 Sum_probs=208.7
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
+.+||+|++|+||++ +||+|+.||.|+ ||++..++ ......+.+|.+.|++++|+|
T Consensus 6 ~~~pIt~~~~s~dg~-----~la~~~~~~~i~--------------iw~~~~~~-----~~~~~~l~gH~~~V~~l~fsp 61 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRT-----QIAICPNNHEVH--------------IYEKSGNK-----WVQVHELKEHNGQVTGVDWAP 61 (371)
T ss_dssp CSSCCCEEEECTTSS-----EEEEECSSSEEE--------------EEEEETTE-----EEEEEEEECCSSCEEEEEEET
T ss_pred CCCCeEEEEECCCCC-----EEEEEeCCCEEE--------------EEECCCCC-----EEEEEEecCCCCCEEEEEECC
Confidence 467999999999998 999999999999 99987653 223456889999999999999
Q ss_pred CCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCC
Q psy15549 92 NGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSS 170 (621)
Q Consensus 92 dg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 170 (621)
++++|++|+ |+.|+||++.... ......+.+|...|.+++|+|++++|++|+.|+.|++|++.......
T Consensus 62 ~~~~l~s~s~D~~i~vWd~~~~~-----~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~----- 131 (371)
T d1k8kc_ 62 DSNRIVTCGTDRNAYVWTLKGRT-----WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW----- 131 (371)
T ss_dssp TTTEEEEEETTSCEEEEEEETTE-----EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE-----
T ss_pred CCCEEEEEECCCeEEEEeecccc-----cccccccccccccccccccccccccceeecccCcceeeeeecccccc-----
Confidence 999999988 8899999998763 24455567899999999999999999999999999999988765421
Q ss_pred CcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC------------------cEEEEecc
Q psy15549 171 NLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKG------------------KNLGILTE 232 (621)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~------------------~~~~~~~~ 232 (621)
........|...|.+++|+|++++|++|+.|+.|++|++... ..+.....
T Consensus 132 ------------~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (371)
T d1k8kc_ 132 ------------VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS 199 (371)
T ss_dssp ------------EEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC
T ss_pred ------------cccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccC
Confidence 123456689999999999999999999999999999998643 35566678
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 312 (621)
|...|.+++|+|++++|++++.|+.|++||+.++..+..+..+ ..+|.+++|+|+++
T Consensus 200 ~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----------------------~~~v~s~~fs~d~~ 256 (371)
T d1k8kc_ 200 SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE-----------------------TLPLLAVTFITESS 256 (371)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS-----------------------SCCEEEEEEEETTE
T ss_pred ccCcEEEEEeecccccccccccCCcceEEeeecccceeeeecc-----------------------cccceeeeecCCCC
Confidence 8999999999999999999999999999999998887776533 34578999999998
Q ss_pred eEEeccccccCCCCCCcceeee
Q psy15549 313 LLIAPSGCLENSDSTRKPISVT 334 (621)
Q Consensus 313 ~l~~~s~~~~~~d~~i~~~~~~ 334 (621)
+|+++ .|+.+.+|...
T Consensus 257 ~la~g------~d~~~~~~~~~ 272 (371)
T d1k8kc_ 257 LVAAG------HDCFPVLFTYD 272 (371)
T ss_dssp EEEEE------TTSSCEEEEEE
T ss_pred EEEEE------cCCceEEEEee
Confidence 88765 46777777654
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=6.1e-39 Score=311.34 Aligned_cols=288 Identities=17% Similarity=0.245 Sum_probs=241.4
Q ss_pred ccccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Q psy15549 78 SRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWK 157 (621)
Q Consensus 78 ~~h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd 157 (621)
..+.+.+..++++|+|+.|+.+.++.+.+|++... .....+.+|...|++++|+|+|++||+|+.||+|+|||
T Consensus 14 ~~~r~~~~~~a~~~~g~~l~~~~~~~v~i~~~~~~-------~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd 86 (311)
T d1nr0a1 14 RTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSL-------TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWD 86 (311)
T ss_dssp CCCTTCCCCCEECTTSSEEEEEETTEEEEEETTCS-------SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCCCCCeEEEEEcCCCCEEEEEeCCEEEEEECCCC-------ceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeee
Confidence 34556677899999999999999889999999876 55666789999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC--CCeEEEEECCCCcEEEEeccCCc
Q psy15549 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV--DNTAIMWDVHKGKNLGILTEHKK 235 (621)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~ 235 (621)
+.+.... ....+..|...|.+++|+|++++|++++. +..+++|++.+++....+.+|..
T Consensus 87 ~~~~~~~-------------------~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~ 147 (311)
T d1nr0a1 87 TTQTTHI-------------------LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQAR 147 (311)
T ss_dssp SSSTTCC-------------------EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSS
T ss_pred eeccccc-------------------cccccccccCcccccccccccccccccccccccccccccccccccccccccccc
Confidence 9887653 23456789999999999999999999886 45699999999999999999999
Q ss_pred ceEEEEEcCCCCE-EEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeE
Q psy15549 236 FVQGVAWDPKNQY-VATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL 314 (621)
Q Consensus 236 ~v~~l~~sp~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l 314 (621)
.|.+++|+|++++ |++|+.|+.|++||+++++....+. .+...|.++.|+|+++++
T Consensus 148 ~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~-----------------------~~~~~i~~v~~~p~~~~l 204 (311)
T d1nr0a1 148 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-----------------------EHTKFVHSVRYNPDGSLF 204 (311)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-----------------------CCSSCEEEEEECTTSSEE
T ss_pred ccccccccccceeeecccccccccccccccccccccccc-----------------------cccccccccccCcccccc
Confidence 9999999999985 7889999999999999988776654 234457899999998887
Q ss_pred EeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEE
Q psy15549 315 IAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNIL 394 (621)
Q Consensus 315 ~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 394 (621)
++++ .|+.|+
T Consensus 205 ~~~~----------------------------------------------------------------------~d~~v~ 214 (311)
T d1nr0a1 205 ASTG----------------------------------------------------------------------GDGTIV 214 (311)
T ss_dssp EEEE----------------------------------------------------------------------TTSCEE
T ss_pred cccc----------------------------------------------------------------------cccccc
Confidence 7655 567777
Q ss_pred EEeCCCCceeEEEe------cccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCc-ccccCCCCCCC
Q psy15549 395 LYDTQHASPFAFIA------NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGE-ESKENDPTKGE 467 (621)
Q Consensus 395 iwd~~~~~~~~~~~------~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 467 (621)
+||..++..+..+. .+|...|++++|+|+|++|++|+.||.|+|||+.++++.+.+..+... .....+.+.+.
T Consensus 215 ~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~ 294 (311)
T d1nr0a1 215 LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 294 (311)
T ss_dssp EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS
T ss_pred ccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCC
Confidence 77777766555442 258889999999999999999999999999999999998888765432 23334555667
Q ss_pred CcccCCCcccHHHhccc
Q psy15549 468 PVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 468 ~~~s~~~~~~~~~w~~~ 484 (621)
.+++++.+|.+++|+.+
T Consensus 295 ~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 295 ALVSISANGFINFVNPE 311 (311)
T ss_dssp CEEEEETTCCEEEEETT
T ss_pred EEEEEECCCEEEEEeCC
Confidence 89999999999999864
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.6e-37 Score=303.11 Aligned_cols=294 Identities=21% Similarity=0.360 Sum_probs=246.2
Q ss_pred ccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCc
Q psy15549 4 TIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA 83 (621)
Q Consensus 4 ~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~ 83 (621)
...+.+.+|.++|++|+|+|+++ +||+|+.||.|+ |||+.++... ..+..|...
T Consensus 46 ~~~~tL~GH~~~I~~l~~s~~~~-----~l~sgs~Dg~v~--------------iWd~~~~~~~-------~~~~~~~~~ 99 (340)
T d1tbga_ 46 RTRRTLRGHLAKIYAMHWGTDSR-----LLVSASQDGKLI--------------IWDSYTTNKV-------HAIPLRSSW 99 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSS-----EEEEEETTTEEE--------------EEETTTTEEE-------EEEECSCSC
T ss_pred eeeEEECCCCCCEEEEEECCCCC-----EEEEEECCCcee--------------eeecccceeE-------EEEeccccc
Confidence 34456778999999999999998 999999999999 9998876543 347889999
Q ss_pred EEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 84 VNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 84 V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
|.+++|+|++.++++|+ ++.+.+|+....... ......+.+|........... +..++.+..+.....+......
T Consensus 100 v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 175 (340)
T d1tbga_ 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGN---VRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQ 175 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCCEEEEESSSSCSC---CCEEEEECCCSSCEEEEEEEE-TTEEEEEETTTEEEEEETTTTE
T ss_pred EEeeEeeccceeeeeecccceeecccccccccc---cccceeccccccccccccccc-cccccccccccccccccccccc
Confidence 99999999999999988 888999998765432 133445667777666655554 4577888889999999877654
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~ 242 (621)
. ......+...+....+.+.+.++++|+.|+.|++||+++++++..+.+|...|.+++|
T Consensus 176 ~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~ 234 (340)
T d1tbga_ 176 Q---------------------TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234 (340)
T ss_dssp E---------------------EEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred c---------------------cccccccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEE
Confidence 3 2445677888999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
+|++++|++++.||.|++||++....+..+.. ..+...|.+++|+|++++|++++
T Consensus 235 ~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~---------------------~~~~~~i~~~~~s~~~~~l~~g~---- 289 (340)
T d1tbga_ 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSH---------------------DNIICGITSVSFSKSGRLLLAGY---- 289 (340)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECC---------------------TTCCSCEEEEEECSSSCEEEEEE----
T ss_pred CCCCCEEEEEeCCCeEEEEeeccccccccccc---------------------ccccCceEEEEECCCCCEEEEEE----
Confidence 99999999999999999999998876655421 22334567888888877766544
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
.||.|++||+.+++
T Consensus 290 ------------------------------------------------------------------~dg~i~iwd~~~~~ 303 (340)
T d1tbga_ 290 ------------------------------------------------------------------DDFNCNVWDALKAD 303 (340)
T ss_dssp ------------------------------------------------------------------TTSCEEEEETTTCC
T ss_pred ------------------------------------------------------------------CCCEEEEEECCCCc
Confidence 78999999999999
Q ss_pred eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 403 PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 403 ~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
.+..+ .+|...|++++|+|+|++|++|+.||+|+|||
T Consensus 304 ~~~~~-~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 304 RAGVL-AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEE-CCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEE-cCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 99888 46999999999999999999999999999996
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=4.7e-37 Score=296.93 Aligned_cols=291 Identities=11% Similarity=0.190 Sum_probs=226.1
Q ss_pred ceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 6 PEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 6 ~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
.+++.+|.++|++|+|+||++ +||+|+.||.|+ +||+.++..... ...+|...|.
T Consensus 5 ~~~~~GH~~~V~~l~~s~dg~-----~l~s~s~Dg~v~--------------vWd~~~~~~~~~------~~~~h~~~v~ 59 (299)
T d1nr0a2 5 DQVRYGHNKAITALSSSADGK-----TLFSADAEGHIN--------------SWDISTGISNRV------FPDVHATMIT 59 (299)
T ss_dssp EEEECCCSSCEEEEEECTTSS-----EEEEEETTSCEE--------------EEETTTCCEEEC------SSCSCSSCEE
T ss_pred ceEcCCCCCCcEEEEECCCCC-----EEEEEcCCCeEE--------------EEECCCCcEEEE------EcCCCCCcEE
Confidence 468889999999999999998 999999999999 998877654332 2357999999
Q ss_pred EEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 86 VVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 86 ~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
+++|+|+|++++++.|+.+++|+....... ........+...+.+++|+|+++++++++ ++.+++|+.....
T Consensus 60 ~v~~~~~g~~~~~~~d~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~~~--- 131 (299)
T d1nr0a2 60 GIKTTSKGDLFTVSWDDHLKVVPAGGSGVD----SSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGKLT--- 131 (299)
T ss_dssp EEEECTTSCEEEEETTTEEEEECSSSSSSC----TTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTEEE---
T ss_pred EEEeeccceeecccceeeEEEeccCCcccc----ccccccccccccccccccccccccccccc-ccccccccccccc---
Confidence 999999999998888999999998754321 11223345778899999999998777665 5689999854321
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE-EeccCCcceEEEEEcC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLG-ILTEHKKFVQGVAWDP 244 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~v~~l~~sp 244 (621)
.. .....+.+++|+|++++|++|+.||.|++||+++++... ....|...|.+++|+|
T Consensus 132 --------------------~~--~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~ 189 (299)
T d1nr0a2 132 --------------------EV--PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSN 189 (299)
T ss_dssp --------------------EE--ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECT
T ss_pred --------------------cc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 11 233457899999999999999999999999998876543 3346889999999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCC
Q psy15549 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENS 324 (621)
Q Consensus 245 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~ 324 (621)
++++|++++.|+.|++||+.++....... ....+...|++++|+|++++|++++
T Consensus 190 ~~~~l~~~~~d~~i~~~~~~~~~~~~~~~--------------------~~~~h~~~v~~l~~s~~~~~l~sgs------ 243 (299)
T d1nr0a2 190 NGAFLVATDQSRKVIPYSVANNFELAHTN--------------------SWTFHTAKVACVSWSPDNVRLATGS------ 243 (299)
T ss_dssp TSSEEEEEETTSCEEEEEGGGTTEESCCC--------------------CCCCCSSCEEEEEECTTSSEEEEEE------
T ss_pred ccccccccccccccccccccccccccccc--------------------cccccccccccccccccccceEEEc------
Confidence 99999999999999999998766543322 1123455678888988888777655
Q ss_pred CCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCcee
Q psy15549 325 DSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPF 404 (621)
Q Consensus 325 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 404 (621)
.|+.|++||+.++...
T Consensus 244 ----------------------------------------------------------------~dg~i~iwd~~~~~~~ 259 (299)
T d1nr0a2 244 ----------------------------------------------------------------LDNSVIVWNMNKPSDH 259 (299)
T ss_dssp ----------------------------------------------------------------TTSCEEEEETTCTTSC
T ss_pred ----------------------------------------------------------------CCCEEEEEECCCCCcc
Confidence 6788889988876543
Q ss_pred EEE-eccc-ccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 405 AFI-ANIH-YTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 405 ~~~-~~~h-~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
... ...| ...|.+++| +++++|++++.||+|++||+.
T Consensus 260 ~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 260 PIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp CEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred eEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence 332 2233 345666655 567899999999999999974
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8.1e-36 Score=294.81 Aligned_cols=342 Identities=17% Similarity=0.260 Sum_probs=245.9
Q ss_pred eecCCCCe-EEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEE
Q psy15549 9 SWHNRDPV-LSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87 (621)
Q Consensus 9 ~~~h~~~v-~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l 87 (621)
+.+|.+.| +|++| +++ +||||+.||.|+ |||+.+++. ..++.+|.+.|+++
T Consensus 8 L~GH~~~vitc~~~--~~~-----~l~tgs~Dg~i~--------------vWd~~~~~~-------~~~l~~H~~~V~~l 59 (355)
T d1nexb2 8 LRGHMTSVITCLQF--EDN-----YVITGADDKMIR--------------VYDSINKKF-------LLQLSGHDGGVWAL 59 (355)
T ss_dssp EECCSSSCEEEEEE--ETT-----EEEEEETTTEEE--------------EEETTTTEE-------EEEEECCSSCEEEE
T ss_pred ECCcCCCcEEEEEE--CCC-----EEEEEeCCCeEE--------------EEECCCCcE-------EEEEECCCCCEEEE
Confidence 55687775 66554 677 999999999999 999887654 34589999999999
Q ss_pred EEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 88 RFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 88 ~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
+|+|++ +|++|+ |+.+++|+...... ........+...+....+.+++.++++++.|+.|++||+.+......
T Consensus 60 ~~s~~~-~l~s~s~D~~i~iw~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~ 133 (355)
T d1nexb2 60 KYAHGG-ILVSGSTDRTVRVWDIKKGCC-----THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPD 133 (355)
T ss_dssp EEETTT-EEEEEETTCCEEEEETTTTEE-----EEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC------
T ss_pred EEcCCC-EEEEEeccccccccccccccc-----ccccccccccccccccccccccceeeeecCCCcEEEEEccCCceecc
Confidence 999865 667766 99999999987631 12222233444556677888999999999999999999988765443
Q ss_pred CCCCCccccc--ccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcC
Q psy15549 167 FPSSNLDEEN--VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244 (621)
Q Consensus 167 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp 244 (621)
.......... ..............|...+.+. .+++++++++..|+.|++||+.+++.+.....+...+.++.|+|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 211 (355)
T d1nexb2 134 HGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH 211 (355)
T ss_dssp -----CCCEEESCTTTCTTEEEEEECCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET
T ss_pred ccccceeccceeccccccceeeeeeecccccccc--ccccceeeeecccceeeeeecccccceeeeeccccccccccccc
Confidence 3111110000 0001111223344555555544 45678999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCC
Q psy15549 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENS 324 (621)
Q Consensus 245 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~ 324 (621)
++.++++++.|+.|++||+.++..+..+..+ ...|.+++|++ ++|++++ .
T Consensus 212 ~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h-----------------------~~~v~~~~~~~--~~l~~~~-----~ 261 (355)
T d1nexb2 212 ERKRCISASMDTTIRIWDLENGELMYTLQGH-----------------------TALVGLLRLSD--KFLVSAA-----A 261 (355)
T ss_dssp TTTEEEEEETTSCEEEEETTTCCEEEEECCC-----------------------SSCCCEEEECS--SEEEEEC-----T
T ss_pred cceeeecccccceEEeeeccccccccccccc-----------------------ccccccccccc--ceeeeee-----c
Confidence 9999999999999999999999887776533 34567888864 6899988 8
Q ss_pred CCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCcee
Q psy15549 325 DSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPF 404 (621)
Q Consensus 325 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 404 (621)
|+.+++|++.... ..+..+...+..+.+ .++++.+++++.|+.|++||+.+++.+
T Consensus 262 dg~i~iwd~~~~~---------~~~~~~~~~~~~~~~----------------~~~~~~~l~~g~d~~i~vwd~~tg~~~ 316 (355)
T d1nexb2 262 DGSIRGWDANDYS---------RKFSYHHTNLSAITT----------------FYVSDNILVSGSENQFNIYNLRSGKLV 316 (355)
T ss_dssp TSEEEEEETTTCC---------EEEEEECTTCCCCCE----------------EEECSSEEEEEETTEEEEEETTTCCBC
T ss_pred ccccccccccccc---------eecccccCCceEEEE----------------EcCCCCEEEEEeCCEEEEEECCCCCEE
Confidence 9999999875321 112222222222221 223445666677999999999999988
Q ss_pred EEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEec
Q psy15549 405 AFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFG 442 (621)
Q Consensus 405 ~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~ 442 (621)
.....+|...|++++|+|+ ..+++++.||.++||.++
T Consensus 317 ~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~d 353 (355)
T d1nexb2 317 HANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEILD 353 (355)
T ss_dssp CSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEEEE
T ss_pred EEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEEe
Confidence 7655679999999999987 478888999998777654
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.5e-36 Score=302.26 Aligned_cols=338 Identities=14% Similarity=0.122 Sum_probs=254.1
Q ss_pred EEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccc
Q psy15549 96 LASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEE 175 (621)
Q Consensus 96 las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~ 175 (621)
+....++...+|+....... ... +....+|.+.|++++|+|+|++||+|+ |+.|+|||+.+++.+..+........
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~--~~~-l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~ 107 (388)
T d1erja_ 32 LKKQTNDYYILYNPALPREI--DVE-LHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANK 107 (388)
T ss_dssp SEEECSSCEEEECTTSCCCE--EEE-EEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC------
T ss_pred cccCCCCcEEEeCCCCCcce--eee-eEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccc
Confidence 44445777788886543211 112 223346999999999999999999987 89999999998876544322111000
Q ss_pred cccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCC
Q psy15549 176 NVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSD 255 (621)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~d 255 (621)
............|...|++++|+|++++|++|+.||.|++||...++.+..+.+|...|.+++|++++..+++++.+
T Consensus 108 ---~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 184 (388)
T d1erja_ 108 ---DPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD 184 (388)
T ss_dssp --------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ---cccccccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00111123345688899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeee
Q psy15549 256 RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTH 335 (621)
Q Consensus 256 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~ 335 (621)
+.+++||..+.........+ ...+....+.+++.+|++++ .|+.+++|+...
T Consensus 185 ~~i~~~d~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~l~~~~-----~d~~i~i~~~~~ 236 (388)
T d1erja_ 185 RTVRIWDLRTGQCSLTLSIE-----------------------DGVTTVAVSPGDGKYIAAGS-----LDRAVRVWDSET 236 (388)
T ss_dssp SEEEEEETTTTEEEEEEECS-----------------------SCEEEEEECSTTCCEEEEEE-----TTSCEEEEETTT
T ss_pred eeeeeeeccccccccccccc-----------------------cccccccccCCCCCeEEEEc-----CCCeEEEeeccc
Confidence 99999999988766554321 11223344455889999988 899999999876
Q ss_pred eeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE----------
Q psy15549 336 VFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA---------- 405 (621)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---------- 405 (621)
...............+|...+.++.|+| ++.+|++++.|+.|++||+.++....
T Consensus 237 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~----------------~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 300 (388)
T d1erja_ 237 GFLVERLDSENESGTGHKDSVYSVVFTR----------------DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 300 (388)
T ss_dssp CCEEEEEC------CCCSSCEEEEEECT----------------TSSEEEEEETTSEEEEEEC---------------CE
T ss_pred CccceeeccccccccCCCCCEEEEEECC----------------CCCEEEEEECCCcEEEEeccCCccccccccccccce
Confidence 5555554555556667888888888887 67899999999999999987654321
Q ss_pred -EEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCccccc------CCCCCCCCcccCCCcccH
Q psy15549 406 -FIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKE------NDPTKGEPVRSEDKPRSA 478 (621)
Q Consensus 406 -~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~s~~~~~~~ 478 (621)
.....|...|++++|+|+|++|++|+.||.|++||+.+++++..+.+|...+..+ .++|++..+++++.|+.|
T Consensus 301 ~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I 380 (388)
T d1erja_ 301 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKA 380 (388)
T ss_dssp EEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEE
T ss_pred eeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEE
Confidence 1223588899999999999999999999999999999999999999998876654 578899999999999999
Q ss_pred HHhccc
Q psy15549 479 EQAKGE 484 (621)
Q Consensus 479 ~~w~~~ 484 (621)
++|+++
T Consensus 381 ~iW~~~ 386 (388)
T d1erja_ 381 RIWKYK 386 (388)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 999874
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=8.4e-36 Score=297.39 Aligned_cols=263 Identities=16% Similarity=0.207 Sum_probs=200.4
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEcc
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
..+|+|++|+|||++||+|+ ++.|+||+...+ .+.....+.+|.+.|.+++|+|++++|++|+.|++|+|||+.
T Consensus 7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~-----~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~ 81 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN-----KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 81 (371)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETT-----EEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCC-----CEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeec
Confidence 46899999999999999988 677999999865 235667788999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE----EEEeccCCc
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN----LGILTEHKK 235 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~ 235 (621)
++... ....+.+|...|++++|+|++++|++++.|+.|++|++..... ......|..
T Consensus 82 ~~~~~-------------------~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~ 142 (371)
T d1k8kc_ 82 GRTWK-------------------PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS 142 (371)
T ss_dssp TTEEE-------------------EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS
T ss_pred ccccc-------------------cccccccccccccccccccccccceeecccCcceeeeeeccccccccccccccccc
Confidence 76422 2345568899999999999999999999999999999876543 234467889
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 236 FVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
.|.+++|+|++++|++|+.|+.|++|++............... .-.+.+..+.
T Consensus 143 ~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~ 195 (371)
T d1k8kc_ 143 TVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG---------------------------SKMPFGELMF 195 (371)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTB---------------------------SCCCTTCEEE
T ss_pred ccccccccccccceeccccCcEEEEEeeccCcccccccccccc---------------------------ccccceeeee
Confidence 9999999999999999999999999998765432211100000 0000111111
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
....+...+.++.|+| ++..+++++.|+.|++
T Consensus 196 --------------------------------~~~~~~~~v~~~~~s~----------------~g~~l~s~~~d~~i~i 227 (371)
T d1k8kc_ 196 --------------------------------ESSSSCGWVHGVCFSA----------------NGSRVAWVSHDSTVCL 227 (371)
T ss_dssp --------------------------------ECCCCSSCEEEEEECS----------------SSSEEEEEETTTEEEE
T ss_pred --------------------------------eccCccCcEEEEEeec----------------ccccccccccCCcceE
Confidence 1112333344444443 4455666668999999
Q ss_pred EeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 396 YDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
||+.++..+..+. .|..+|.+++|+|||++|++| .|+.+++|.++..
T Consensus 228 wd~~~~~~~~~~~-~~~~~v~s~~fs~d~~~la~g-~d~~~~~~~~~~~ 274 (371)
T d1k8kc_ 228 ADADKKMAVATLA-SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSA 274 (371)
T ss_dssp EEGGGTTEEEEEE-CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETT
T ss_pred Eeeecccceeeee-cccccceeeeecCCCCEEEEE-cCCceEEEEeeCC
Confidence 9999999888884 588999999999999877765 5788888877643
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.3e-34 Score=284.59 Aligned_cols=293 Identities=16% Similarity=0.236 Sum_probs=252.4
Q ss_pred eeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC
Q psy15549 72 EFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE 150 (621)
Q Consensus 72 ~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d 150 (621)
...++|.||.+.|++|+|+|++++||+|+ |+.|+||++..+ ..+..+..|...|.+++|+|++++|++|+.|
T Consensus 46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~-------~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d 118 (340)
T d1tbga_ 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTT-------NKVHAIPLRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTT-------EEEEEEECSCSCEEEEEECTTSSEEEEEETT
T ss_pred eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccc-------eeEEEEecccccEEeeEeeccceeeeeeccc
Confidence 34567999999999999999999999998 888999999877 6677888999999999999999999999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
+.+++|+......... ....+.+|........... +..++....+.....+...........
T Consensus 119 ~~i~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (340)
T d1tbga_ 119 NICSIYNLKTREGNVR-----------------VSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTF 180 (340)
T ss_dssp CCEEEEESSSSCSCCC-----------------EEEEECCCSSCEEEEEEEE-TTEEEEEETTTEEEEEETTTTEEEEEE
T ss_pred ceeecccccccccccc-----------------cceeccccccccccccccc-ccccccccccccccccccccccccccc
Confidence 9999999877654322 2355667777766666554 457788888999999999888887777
Q ss_pred ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 231 TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 231 ~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
..+...+....+.+.+.++++++.|+.|++||+++++.+..+.. +...|.+++|+|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~-----------------------h~~~i~~v~~~p~ 237 (340)
T d1tbga_ 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-----------------------HESDINAICFFPN 237 (340)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECC-----------------------CSSCEEEEEECTT
T ss_pred cccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEEeC-----------------------CCCCeEEEEECCC
Confidence 78888999999999999999999999999999999988777643 3456789999998
Q ss_pred CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 311 g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
+++|++++ .|
T Consensus 238 ~~~l~s~s----------------------------------------------------------------------~d 247 (340)
T d1tbga_ 238 GNAFATGS----------------------------------------------------------------------DD 247 (340)
T ss_dssp SSEEEEEE----------------------------------------------------------------------TT
T ss_pred CCEEEEEe----------------------------------------------------------------------CC
Confidence 88777655 67
Q ss_pred CcEEEEeCCCCceeEEEe-cccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCc
Q psy15549 391 NNILLYDTQHASPFAFIA-NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPV 469 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~-~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (621)
+.|++||+.....+..+. ..+...|++++|+|+|++|++|+.||.|++||+.++++...+.+|...+..+.+++++..+
T Consensus 248 ~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l 327 (340)
T d1tbga_ 248 ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAV 327 (340)
T ss_dssp SCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCE
T ss_pred CeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEE
Confidence 888899988887766553 2466789999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccHHHhc
Q psy15549 470 RSEDKPRSAEQAK 482 (621)
Q Consensus 470 ~s~~~~~~~~~w~ 482 (621)
++++.|+.|++|+
T Consensus 328 ~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 328 ATGSWDSFLKIWN 340 (340)
T ss_dssp EEEETTSCEEEEC
T ss_pred EEEccCCEEEEeC
Confidence 9999999999995
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.7e-34 Score=278.72 Aligned_cols=287 Identities=14% Similarity=0.127 Sum_probs=218.4
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccc-cccCCCeEEEEECCCCCEEEEEeCCC
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDL-SRHQKAVNVVRFSPNGELLASGDDES 151 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~i~~sp~g~~l~s~s~dg 151 (621)
.+.+.||.+.|++++|+|+|++|++|+ |+.|++|++..+ .....+ .+|...|++++|+|++.+ ++++.|+
T Consensus 5 ~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~-------~~~~~~~~~h~~~v~~v~~~~~g~~-~~~~~d~ 76 (299)
T d1nr0a2 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG-------ISNRVFPDVHATMITGIKTTSKGDL-FTVSWDD 76 (299)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CEEECSSCSCSSCEEEEEECTTSCE-EEEETTT
T ss_pred ceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCC-------cEEEEEcCCCCCcEEEEEeecccee-eccccee
Confidence 446899999999999999999999998 889999999876 334444 468999999999999874 5667799
Q ss_pred cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q psy15549 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 231 (621)
.+++|+.......... .....+...+.+++|+|+++++++++ ++.+.+|+.. +.....
T Consensus 77 ~v~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~--~~~~~~- 134 (299)
T d1nr0a2 77 HLKVVPAGGSGVDSSK------------------AVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHG--KLTEVP- 134 (299)
T ss_dssp EEEEECSSSSSSCTTS------------------CCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETT--EEEEEE-
T ss_pred eEEEeccCCccccccc------------------cccccccccccccccccccccccccc-cccccccccc--cccccc-
Confidence 9999998765432111 23345778899999999998777766 5789999853 333332
Q ss_pred cCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCC
Q psy15549 232 EHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311 (621)
Q Consensus 232 ~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 311 (621)
....+.+++|+|++++|++++.||.|++||+++++...... ..+...|.+++|+|++
T Consensus 135 -~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~----------------------~~~~~~i~~~~~~~~~ 191 (299)
T d1nr0a2 135 -ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT----------------------IVHPAEITSVAFSNNG 191 (299)
T ss_dssp -CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE----------------------EECSSCEEEEEECTTS
T ss_pred -ccccccccccccccccccccccccccccccccccccccccc----------------------cccccccccccccccc
Confidence 34457889999999999999999999999998776543211 1234467888888888
Q ss_pred CeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 312 ~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
++|++++ .++
T Consensus 192 ~~l~~~~----------------------------------------------------------------------~d~ 201 (299)
T d1nr0a2 192 AFLVATD----------------------------------------------------------------------QSR 201 (299)
T ss_dssp SEEEEEE----------------------------------------------------------------------TTS
T ss_pred ccccccc----------------------------------------------------------------------ccc
Confidence 7776654 667
Q ss_pred cEEEEeCCCCceeEEE--ecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCC--C-CCcccccCCCCCC
Q psy15549 392 NILLYDTQHASPFAFI--ANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP--P-SGEESKENDPTKG 466 (621)
Q Consensus 392 ~i~iwd~~~~~~~~~~--~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~--~-~~~~~~~~~~~~~ 466 (621)
.|++||+.++..+... ..+|...|++++|+|+|++|++|+.||.|++||+.++.....+.. + ...+..+ +.+++
T Consensus 202 ~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~-~~~~~ 280 (299)
T d1nr0a2 202 KVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSV-IWLNE 280 (299)
T ss_dssp CEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEE-EEEET
T ss_pred ccccccccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEE-EECCC
Confidence 7888887776544332 236889999999999999999999999999999998765443322 2 2233333 44667
Q ss_pred CCcccCCCcccHHHhccc
Q psy15549 467 EPVRSEDKPRSAEQAKGE 484 (621)
Q Consensus 467 ~~~~s~~~~~~~~~w~~~ 484 (621)
..+++++.|+.|++|+++
T Consensus 281 ~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 281 TTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp TEEEEEETTSCEEEEECC
T ss_pred CEEEEEeCCCEEEEEecc
Confidence 889999999999999864
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-33 Score=275.35 Aligned_cols=326 Identities=21% Similarity=0.278 Sum_probs=248.8
Q ss_pred cccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccC
Q psy15549 3 CTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK 82 (621)
Q Consensus 3 ~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~ 82 (621)
++.+.++.+|.+.|.+ +++++|+ +||||+.||.|+ |||+.+++.. .++.+|.+
T Consensus 6 ~~~~~~l~GH~~~V~s-~~~~~g~-----~l~sgs~Dg~i~--------------vWd~~~~~~~-------~~~~~h~~ 58 (342)
T d2ovrb2 6 LKSPKVLKGHDDHVIT-CLQFCGN-----RIVSGSDDNTLK--------------VWSAVTGKCL-------RTLVGHTG 58 (342)
T ss_dssp CCCCEEEECSTTSCEE-EEEEETT-----EEEEEETTSCEE--------------EEETTTCCEE-------EECCCCSS
T ss_pred CCcCEEECCcCCceEE-EEEECCC-----EEEEEeCCCeEE--------------EEECCCCCEE-------EEEeCCCC
Confidence 4567788899999876 4777888 999999999999 9998876543 45889999
Q ss_pred cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 83 AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
.|.+++|+|+ +|++|+ |+.+++|+.... ........+...+....+ ....++.+..|+.+.+|+..++
T Consensus 59 ~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~ 127 (342)
T d2ovrb2 59 GVWSSQMRDN--IIISGSTDRTLKVWNAETG-------ECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETG 127 (342)
T ss_dssp CEEEEEEETT--EEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEESSSC
T ss_pred CEEEEEeCCC--ccccceecccccccccccc-------cceecccccceeEeeeec--ccccccccccceeEEEeecccc
Confidence 9999999975 888877 889999998876 333344445555655554 3457888999999999999888
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 241 (621)
... ..+..+..... .+.+....+++++.|+.|++||+.....+..+.+|...+..+
T Consensus 128 ~~~---------------------~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~- 183 (342)
T d2ovrb2 128 QCL---------------------HVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL- 183 (342)
T ss_dssp CEE---------------------EEEECCSSCEE--EEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEE-
T ss_pred cce---------------------eeeecccccce--eeccccceeeeecCCCeEEEeecccceeeEEEcCcccccccc-
Confidence 643 22333333333 333456688999999999999999999999998888776554
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccc
Q psy15549 242 WDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCL 321 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~ 321 (621)
++++.+|++++.||.|++||++.++.+..+..+ ...+.+++++ +++|++++
T Consensus 184 -~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~-----------------------~~~v~~~~~~--~~~l~s~s--- 234 (342)
T d2ovrb2 184 -QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH-----------------------QSLTSGMELK--DNILVSGN--- 234 (342)
T ss_dssp -EECSSEEEEEETTSCEEEEETTTCCEEEEECCC-----------------------CSCEEEEEEE--TTEEEEEE---
T ss_pred -cCCCCEEEEEeCCCeEEEeecccceeeeEeccc-----------------------ccceeEEecC--CCEEEEEc---
Confidence 456899999999999999999998887766433 3344556554 56999998
Q ss_pred cCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC
Q psy15549 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA 401 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 401 (621)
.|+.+++|+........... ....+...+.++.+++ .++++++.||.|++||+.++
T Consensus 235 --~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~------------------~~~~s~s~Dg~i~iwd~~tg 290 (342)
T d2ovrb2 235 --ADSTVKIWDIKTGQCLQTLQ----GPNKHQSAVTCLQFNK------------------NFVITSSDDGTVKLWDLKTG 290 (342)
T ss_dssp --TTSCEEEEETTTCCEEEEEC----STTSCSSCEEEEEECS------------------SEEEEEETTSEEEEEETTTC
T ss_pred --CCCEEEEEeccccccccccc----ccceeeeceeecccCC------------------CeeEEEcCCCEEEEEECCCC
Confidence 89999999875432221111 1123344445555544 78999999999999999999
Q ss_pred ceeEEEec----ccccceEEEEEcCCCCeEEEEeCCCc----EEEEEecC
Q psy15549 402 SPFAFIAN----IHYTKLTDITWSSDGKVLIASSTDGY----CSIISFGD 443 (621)
Q Consensus 402 ~~~~~~~~----~h~~~v~~~~~spdg~~l~s~s~dg~----i~iw~~~~ 443 (621)
+.+..+.. +|...|++++|+|++.+|++|+.||+ |++||++.
T Consensus 291 ~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 291 EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp CEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence 98887743 57788999999999999999999986 99999874
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.5e-34 Score=279.80 Aligned_cols=320 Identities=17% Similarity=0.178 Sum_probs=243.7
Q ss_pred cccccccCcE-EEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 75 SDLSRHQKAV-NVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 75 ~~~~~h~~~V-~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
.+|+||.+.| +|++ +++++||+|+ |+.|+|||+..+ +.+..+.+|.+.|++++|+|+ .+|++|+.|+.
T Consensus 6 ~tL~GH~~~vitc~~--~~~~~l~tgs~Dg~i~vWd~~~~-------~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~ 75 (355)
T d1nexb2 6 TTLRGHMTSVITCLQ--FEDNYVITGADDKMIRVYDSINK-------KFLLQLSGHDGGVWALKYAHG-GILVSGSTDRT 75 (355)
T ss_dssp EEEECCSSSCEEEEE--EETTEEEEEETTTEEEEEETTTT-------EEEEEEECCSSCEEEEEEETT-TEEEEEETTCC
T ss_pred EEECCcCCCcEEEEE--ECCCEEEEEeCCCeEEEEECCCC-------cEEEEEECCCCCEEEEEEcCC-CEEEEEecccc
Confidence 4589998876 5555 5688999998 888999999876 778889999999999999985 58999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe--
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL-- 230 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~-- 230 (621)
|++|++....... ......+...+..+.+++++.++++++.|+.|++||+.+.......
T Consensus 76 i~iw~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~ 136 (355)
T d1nexb2 76 VRVWDIKKGCCTH-------------------VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGE 136 (355)
T ss_dssp EEEEETTTTEEEE-------------------EECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC---------
T ss_pred ccccccccccccc-------------------ccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccc
Confidence 9999998876431 1122233444566778899999999999999999999876543221
Q ss_pred ---------------------ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcccccccc
Q psy15549 231 ---------------------TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKV 289 (621)
Q Consensus 231 ---------------------~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (621)
..|...+ ..+.+++++++++..|+.|++||+.+++.+......
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~-------------- 200 (355)
T d1nexb2 137 EHDYPLVFHTPEENPYFVGVLRGHMASV--RTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH-------------- 200 (355)
T ss_dssp --CCCEEESCTTTCTTEEEEEECCSSCE--EEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC--------------
T ss_pred cceeccceeccccccceeeeeeeccccc--cccccccceeeeecccceeeeeecccccceeeeecc--------------
Confidence 1223333 345567899999999999999999998877665422
Q ss_pred ccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecC
Q psy15549 290 VPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELK 369 (621)
Q Consensus 290 ~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (621)
...+.++.|+|++.++++++ .|+.+++|+.... .....+.+|...+.++.+++
T Consensus 201 ---------~~~~~~~~~~~~~~~~~~~~-----~d~~i~i~d~~~~-------~~~~~~~~h~~~v~~~~~~~------ 253 (355)
T d1nexb2 201 ---------TDRIYSTIYDHERKRCISAS-----MDTTIRIWDLENG-------ELMYTLQGHTALVGLLRLSD------ 253 (355)
T ss_dssp ---------SSCEEEEEEETTTTEEEEEE-----TTSCEEEEETTTC-------CEEEEECCCSSCCCEEEECS------
T ss_pred ---------ccccccccccccceeeeccc-----ccceEEeeecccc-------cccccccccccccccccccc------
Confidence 33457899999999999999 8999999987532 23345567777777777665
Q ss_pred CCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEE-EEcCCCCeEEEEeCCCcEEEEEecCCcCCc
Q psy15549 370 PSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDI-TWSSDGKVLIASSTDGYCSIISFGDNEIGI 448 (621)
Q Consensus 370 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~-~~spdg~~l~s~s~dg~i~iw~~~~~~~~~ 448 (621)
+++++++.||.|++||+.+....... |...+.++ +|++++++|++| .||.|++||+.+++++.
T Consensus 254 ------------~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~ 317 (355)
T d1nexb2 254 ------------KFLVSAAADGSIRGWDANDYSRKFSY---HHTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVH 317 (355)
T ss_dssp ------------SEEEEECTTSEEEEEETTTCCEEEEE---ECTTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCC
T ss_pred ------------ceeeeeecccccccccccccceeccc---ccCCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEE
Confidence 78999999999999999988765543 55555555 456777766655 58999999999999875
Q ss_pred -ccCCCCCcccccCCCCCCCCcccCCCcccHHHhcc
Q psy15549 449 -PYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKG 483 (621)
Q Consensus 449 -~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~ 483 (621)
.+..|...+..+.++++ ..+++++.||.+++|..
T Consensus 318 ~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 318 ANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEIL 352 (355)
T ss_dssp SCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEEE
T ss_pred EEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEE
Confidence 56778888888888876 45677788998777653
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.9e-32 Score=265.20 Aligned_cols=294 Identities=16% Similarity=0.186 Sum_probs=215.5
Q ss_pred CCCeEEEeccccccCCcceEEEEecCCce-EEeeeccCccccccceeEEeccccccccceeeccccccc-cCcEEEEEEc
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRIVTGGADSH-VFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRH-QKAVNVVRFS 90 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l~tg~~dg~-v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~l~~s 90 (621)
...+++++|+|++. .|++++.+.. |+ .|+....... ....+.+| ...|++++|+
T Consensus 17 ~~~~t~l~~~~~~~-----~la~~~~~~~~i~--------------~~~~~~~~~~-----~~~~~~gh~~~~v~~v~fs 72 (325)
T d1pgua1 17 RNFTTHLSYDPTTN-----AIAYPCGKSAFVR--------------CLDDGDSKVP-----PVVQFTGHGSSVVTTVKFS 72 (325)
T ss_dssp TTCCCCCEEETTTT-----EEEEEETTEEEEE--------------ECCSSCCSSC-----SEEEECTTTTSCEEEEEEC
T ss_pred CCCeEEEEECCCCC-----EEEEEeCCCEEEE--------------EEeCCCCCcc-----ceEEEeCCCCCCEEEEEEe
Confidence 33578999999998 8888876554 44 5554332211 12346677 5689999999
Q ss_pred c--CCCEEEEEc-CCceEEEEeccCccccc-cceecccccccCCCeEEEEECCCCCEEEEEeC--CCcEEEEEccCCCCC
Q psy15549 91 P--NGELLASGD-DVGKEIWYLTERESGIA-NVEFASDLSRHQKAVNVVRFSPNGELLASGDD--ESTIIVWKQKTDQDL 164 (621)
Q Consensus 91 p--dg~~las~~-d~~v~iw~~~~~~~~~~-~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~--dg~i~vwd~~~~~~~ 164 (621)
| +|.+|++|+ |+.|+||++........ .......+..|.++|.+++|++++++|++++. ++.+++|+.++++.+
T Consensus 73 P~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 152 (325)
T d1pgua1 73 PIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSL 152 (325)
T ss_dssp SSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEE
T ss_pred eCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccc
Confidence 8 678999988 89999999976532111 11222335568899999999999999887764 678999999887753
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEEEe---ccCCcceEEE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTH-LISGSVDNTAIMWDVHKGKNLGIL---TEHKKFVQGV 240 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~-l~s~~~dg~i~vwd~~~~~~~~~~---~~~~~~v~~l 240 (621)
..+.+|...|.+++|+|++.+ +++++.|+.+++||+.+++....+ ..|...|.++
T Consensus 153 ---------------------~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v 211 (325)
T d1pgua1 153 ---------------------GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDV 211 (325)
T ss_dssp ---------------------EECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEE
T ss_pred ---------------------eeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEe
Confidence 566789999999999998865 678999999999999887766655 3567789999
Q ss_pred EEcCC-CCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccc
Q psy15549 241 AWDPK-NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSG 319 (621)
Q Consensus 241 ~~sp~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~ 319 (621)
+|+|+ +.+|++++.|+.|++||+++++.+..+..+..++ .++.|++
T Consensus 212 ~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v-----------------------~~~~~s~---------- 258 (325)
T d1pgua1 212 EFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV-----------------------QGGIFAL---------- 258 (325)
T ss_dssp EECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCC-----------------------CSCEEEE----------
T ss_pred eeccccceeccccccccceeeeeecccccccccccccccc-----------------------ccceeee----------
Confidence 99996 6889999999999999999998877765433221 2222220
Q ss_pred cccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCC
Q psy15549 320 CLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQ 399 (621)
Q Consensus 320 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 399 (621)
. .+++.+|++++.|+.|+|||+.
T Consensus 259 ----------------------------------------~-----------------~~dg~~l~s~s~D~~i~iwd~~ 281 (325)
T d1pgua1 259 ----------------------------------------S-----------------WLDSQKFATVGADATIRVWDVT 281 (325)
T ss_dssp ----------------------------------------E-----------------ESSSSEEEEEETTSEEEEEETT
T ss_pred ----------------------------------------e-----------------ccCCCEEEEEeCCCeEEEEECC
Confidence 0 0123556667789999999999
Q ss_pred CCceeEEEec-ccccceEEEEEcCC-CCeEEEEeCCCcEEEEEe
Q psy15549 400 HASPFAFIAN-IHYTKLTDITWSSD-GKVLIASSTDGYCSIISF 441 (621)
Q Consensus 400 ~~~~~~~~~~-~h~~~v~~~~~spd-g~~l~s~s~dg~i~iw~~ 441 (621)
+++++..+.. .|...+..+++.+. +.+|++++.||.|++||+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 282 TSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp TTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred CCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence 9998887642 23333444444433 247899999999999996
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.5e-32 Score=266.58 Aligned_cols=296 Identities=18% Similarity=0.236 Sum_probs=226.6
Q ss_pred CcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceeccccccc-CCCeEEEEECC--CCCEEEEEeCCCcEEEEEc
Q psy15549 82 KAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRH-QKAVNVVRFSP--NGELLASGDDESTIIVWKQ 158 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~i~~sp--~g~~l~s~s~dg~i~vwd~ 158 (621)
+.+++++|+|+|..|++++++.+.++.+..... .......+.+| ...|++++|+| ++.+|++|+.||+|+|||+
T Consensus 18 ~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~---~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~ 94 (325)
T d1pgua1 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDS---KVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGW 94 (325)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCC---SSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCC---CccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeee
Confidence 356889999999999998877666655543321 11334456677 46799999998 6689999999999999999
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC--CCeEEEEECCCCcEEEEeccCCcc
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV--DNTAIMWDVHKGKNLGILTEHKKF 236 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~ 236 (621)
..+.....+ .......+..|.+.|.+++|++++++|++++. ++.+.+|+..+++.+..+.+|...
T Consensus 95 ~~~~~~~~~-------------~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 161 (325)
T d1pgua1 95 TFDKESNSV-------------EVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQR 161 (325)
T ss_dssp EEEGGGTEE-------------EEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSC
T ss_pred cCCcceeee-------------ecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccc
Confidence 877654322 11122345678999999999999999988765 678999999999999999999999
Q ss_pred eEEEEEcCCCCE-EEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 237 VQGVAWDPKNQY-VATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 237 v~~l~~sp~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
|.+++|+|++.+ +++++.|+.|++||+...+....+.. ...+...|.+++|+|++.
T Consensus 162 v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~--------------------~~~~~~~v~~v~~~pd~~--- 218 (325)
T d1pgua1 162 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT--------------------HHKQGSFVRDVEFSPDSG--- 218 (325)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS--------------------SSCTTCCEEEEEECSTTC---
T ss_pred cccccccccccceEEEeecccccccccccccccceeccc--------------------ccCCCCccEEeeeccccc---
Confidence 999999999875 67899999999999988776554431 123455678888888632
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
.++++++.|+.|++
T Consensus 219 ------------------------------------------------------------------~~l~s~~~d~~i~i 232 (325)
T d1pgua1 219 ------------------------------------------------------------------EFVITVGSDRKISC 232 (325)
T ss_dssp ------------------------------------------------------------------CEEEEEETTCCEEE
T ss_pred ------------------------------------------------------------------eeccccccccceee
Confidence 22344557899999
Q ss_pred EeCCCCceeEEEecccccceEEEEEc---CCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccc--cCCC-CCCCCc
Q psy15549 396 YDTQHASPFAFIANIHYTKLTDITWS---SDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESK--ENDP-TKGEPV 469 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~~v~~~~~s---pdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~ 469 (621)
||+.+++.+..+. +|...+.++.|+ |||++|++++.||.|+|||+.++++++.+..+...... +.+. .....+
T Consensus 233 wd~~~~~~~~~l~-~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (325)
T d1pgua1 233 FDGKSGEFLKYIE-DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRI 311 (325)
T ss_dssp EETTTCCEEEECC-BTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEE
T ss_pred eeecccccccccc-ccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEE
Confidence 9999999888884 577777666665 78999999999999999999999988887766554332 2222 233468
Q ss_pred ccCCCcccHHHhcc
Q psy15549 470 RSEDKPRSAEQAKG 483 (621)
Q Consensus 470 ~s~~~~~~~~~w~~ 483 (621)
++++.|+.+++|++
T Consensus 312 ~s~s~dg~i~vwdl 325 (325)
T d1pgua1 312 ISLSLDGTLNFYEL 325 (325)
T ss_dssp EEEETTSCEEEEET
T ss_pred EEEECCCEEEEEEC
Confidence 88999999999974
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-31 Score=263.04 Aligned_cols=319 Identities=18% Similarity=0.235 Sum_probs=250.3
Q ss_pred ccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCc
Q psy15549 74 ASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152 (621)
Q Consensus 74 ~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~ 152 (621)
...+++|.+.|.+ +++++|++||+|+ |+.|+||++..+ +.+..+.+|...|.+++|+|+ +|++|+.|+.
T Consensus 9 ~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~-------~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~ 78 (342)
T d2ovrb2 9 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTG-------KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRT 78 (342)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTC-------CEEEECCCCSSCEEEEEEETT--EEEEEETTSC
T ss_pred CEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCC-------CEEEEEeCCCCCEEEEEeCCC--ccccceeccc
Confidence 4458999999865 4777899999998 889999999876 667888999999999999874 9999999999
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 232 (621)
+++|+....... .....+...+....+. ...++.+..|+.+.+|+..+++....+..
T Consensus 79 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 135 (342)
T d2ovrb2 79 LKVWNAETGECI---------------------HTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMG 135 (342)
T ss_dssp EEEEETTTTEEE---------------------EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEEC
T ss_pred ccccccccccce---------------------ecccccceeEeeeecc--cccccccccceeEEEeecccccceeeeec
Confidence 999998776532 3334455556655554 45788899999999999999988877765
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 312 (621)
+.... ..+.+....+++++.|+.|++||......+..+..+.. ....+++++.
T Consensus 136 ~~~~~--~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~ 188 (342)
T d2ovrb2 136 HVAAV--RCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN-------------------------RVYSLQFDGI 188 (342)
T ss_dssp CSSCE--EEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSS-------------------------CEEEEEECSS
T ss_pred ccccc--eeeccccceeeeecCCCeEEEeecccceeeEEEcCccc-------------------------ccccccCCCC
Confidence 54443 33445677888999999999999998888776653321 3456677889
Q ss_pred eEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCc
Q psy15549 313 LLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENN 392 (621)
Q Consensus 313 ~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 392 (621)
++++++ .|+.+++|++... ........+...+.++.+.+ +++++++.|+.
T Consensus 189 ~l~s~~-----~dg~i~~~d~~~~-------~~~~~~~~~~~~v~~~~~~~------------------~~l~s~s~d~~ 238 (342)
T d2ovrb2 189 HVVSGS-----LDTSIRVWDVETG-------NCIHTLTGHQSLTSGMELKD------------------NILVSGNADST 238 (342)
T ss_dssp EEEEEE-----TTSCEEEEETTTC-------CEEEEECCCCSCEEEEEEET------------------TEEEEEETTSC
T ss_pred EEEEEe-----CCCeEEEeecccc-------eeeeEecccccceeEEecCC------------------CEEEEEcCCCE
Confidence 999999 8999999987532 23344556666666666654 78999999999
Q ss_pred EEEEeCCCCceeEEEec--ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccC-----CCCCcccccCCCCC
Q psy15549 393 ILLYDTQHASPFAFIAN--IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYV-----PPSGEESKENDPTK 465 (621)
Q Consensus 393 i~iwd~~~~~~~~~~~~--~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 465 (621)
|++||....+....+.. .|...+.++.++ +++|++|+.||+|++||+.++++++.+. .+...+..+.++++
T Consensus 239 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~ 316 (342)
T d2ovrb2 239 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 316 (342)
T ss_dssp EEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSS
T ss_pred EEEEecccccccccccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCC
Confidence 99999999988777743 355667777665 5699999999999999999998877664 34556888899999
Q ss_pred CCCcccCCCccc----HHHhccc
Q psy15549 466 GEPVRSEDKPRS----AEQAKGE 484 (621)
Q Consensus 466 ~~~~~s~~~~~~----~~~w~~~ 484 (621)
+..+++++.+|+ +++|+..
T Consensus 317 ~~~la~g~~dGt~~~~l~~~Df~ 339 (342)
T d2ovrb2 317 KLVCAVGSRNGTEETKLLVLDFD 339 (342)
T ss_dssp EEEEEEECSSSSSCCEEEEEECC
T ss_pred CCEEEEEeCCCCCeeEEEEEeCC
Confidence 999999988885 6777754
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.9e-31 Score=251.21 Aligned_cols=280 Identities=13% Similarity=0.164 Sum_probs=213.4
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
..+.+.+|.++|++|+|+| |++|+.||.|+ +||+.++ ..+|...|
T Consensus 5 ~i~~l~gH~~~I~~l~~s~---------l~sgs~Dg~v~--------------~Wd~~~~------------~~~h~~~V 49 (287)
T d1pgua2 5 VLKTISGHNKGITALTVNP---------LISGSYDGRIM--------------EWSSSSM------------HQDHSNLI 49 (287)
T ss_dssp EEEEECCCSSCEEEEETTT---------TEEEETTSCEE--------------ETTTTEE------------ECCCCSCE
T ss_pred eeEEECCCCCceEEEEECc---------EEEEeCCCeEE--------------EEECCCC------------CCCCCCCE
Confidence 3456778999999999984 79999999999 8887643 35789999
Q ss_pred EEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCC
Q psy15549 85 NVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDL 164 (621)
Q Consensus 85 ~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~ 164 (621)
.+++|++++.++..+.|+.+++|++... . ....+..+++++++..+++++ ++.+.+|+..++..+
T Consensus 50 ~~~~~~~~~~~~s~s~D~~v~~w~~~~~-------~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 114 (287)
T d1pgua2 50 VSLDNSKAQEYSSISWDDTLKVNGITKH-------E-------FGSQPKVASANNDGFTAVLTN-DDDLLILQSFTGDII 114 (287)
T ss_dssp EEEECCSTTCCEEEETTTEEEETTEEEE-------E-------CSSCEEEEEECSSSEEEEEET-TSEEEEEETTTCCEE
T ss_pred EEEEecCCCeEEEEeecccccccccccc-------c-------cccceeeeeeccCCceEEEee-cccceeeeccceeee
Confidence 9999998776555455999999988643 1 233567888998887766655 557889998877643
Q ss_pred CCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC-eEEEEECCCCcEEEEec-cCCcceEEEEE
Q psy15549 165 PEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN-TAIMWDVHKGKNLGILT-EHKKFVQGVAW 242 (621)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg-~i~vwd~~~~~~~~~~~-~~~~~v~~l~~ 242 (621)
..+. +...+ .++++++..+++++.++ .+++|++...+....+. .|...+++++|
T Consensus 115 ---------------------~~~~-~~~~~--~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~ 170 (287)
T d1pgua2 115 ---------------------KSVR-LNSPG--SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISI 170 (287)
T ss_dssp ---------------------EEEE-CSSCE--EEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEE
T ss_pred ---------------------eecc-cccee--eeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEe
Confidence 2222 22333 45566777888888765 79999997766655554 47788999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 243 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
+|++.+|++|+.||.|++||+.++....... ..+...|.+++|+|++.......
T Consensus 171 s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~----------------------~~h~~~v~~~~~~p~~~~~~~~~---- 224 (287)
T d1pgua2 171 SPSETYIAAGDVMGKILLYDLQSREVKTSRW----------------------AFRTSKINAISWKPAEKGANEEE---- 224 (287)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEECCS----------------------CCCSSCEEEEEECCCC------C----
T ss_pred ccCccccccccccccccceeecccccccccc----------------------cccccccceeeeccccccccccc----
Confidence 9999999999999999999999887654321 23455689999999987765543
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
.++.++++++.|+.|++||+.++.
T Consensus 225 --------------------------------------------------------~~~~~l~sgs~D~~i~iw~~~~~~ 248 (287)
T d1pgua2 225 --------------------------------------------------------IEEDLVATGSLDTNIFIYSVKRPM 248 (287)
T ss_dssp --------------------------------------------------------CSCCEEEEEETTSCEEEEESSCTT
T ss_pred --------------------------------------------------------CCCCeeEeecCCCeEEEEECCCCC
Confidence 134789999999999999998866
Q ss_pred eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 403 PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 403 ~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
.......+|...|++++|+|++ .|++++.||.|++|++
T Consensus 249 ~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 249 KIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp CCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred eEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence 5555557899999999999987 5899999999999996
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.98 E-value=1.3e-31 Score=265.55 Aligned_cols=336 Identities=14% Similarity=0.045 Sum_probs=233.0
Q ss_pred eEEEeccc-cccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 16 VLSVDIQL-KQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 16 v~~l~~sp-d~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
+.+-.||| ||+ ++|+++ .|.|. +|++..+... ..+|...|.+++|+|||+
T Consensus 5 ~~~~~fSP~dG~-----~~a~~~-~g~v~--------------v~d~~~~~~~---------~~~~~~~v~~~~~spDg~ 55 (360)
T d1k32a3 5 KFAEDFSPLDGD-----LIAFVS-RGQAF--------------IQDVSGTYVL---------KVPEPLRIRYVRRGGDTK 55 (360)
T ss_dssp GGEEEEEECGGG-----CEEEEE-TTEEE--------------EECTTSSBEE---------ECSCCSCEEEEEECSSSE
T ss_pred hhcccccCCCCC-----EEEEEE-CCeEE--------------EEECCCCcEE---------EccCCCCEEEEEECCCCC
Confidence 34578999 998 888876 46788 8988765432 126899999999999999
Q ss_pred EEEEEc-CC--ceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 95 LLASGD-DV--GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 95 ~las~~-d~--~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
+|++++ ++ .+.+|+...+ ....+..|...|.+++|+|+|++|++++.++.+++|++.++...
T Consensus 56 ~l~~~~~~~g~~v~v~d~~~~--------~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~------- 120 (360)
T d1k32a3 56 VAFIHGTREGDFLGIYDYRTG--------KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPT------- 120 (360)
T ss_dssp EEEEEEETTEEEEEEEETTTC--------CEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE-------
T ss_pred EEEEEEcCCCCEEEEEECCCC--------cEEEeeCCCceEEeeeecccccccceecccccccccccccccee-------
Confidence 998766 43 4789998775 24456789999999999999999999999999999999888743
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe----------CCCeEEEEECCCCcEEEEeccCCcceEEEE
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS----------VDNTAIMWDVHKGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 241 (621)
..+..|...+.+++|+|||++|+.+. .++.+++||+.+++... +..+...+..++
T Consensus 121 --------------~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~-~~~~~~~~~~~~ 185 (360)
T d1k32a3 121 --------------VIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFA-ATTENSHDYAPA 185 (360)
T ss_dssp --------------EEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEE-CSCSSSBEEEEE
T ss_pred --------------eeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCceee-eccccccccccc
Confidence 56678888999999999999998654 34579999998876654 445777888999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccc
Q psy15549 242 WDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCL 321 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~ 321 (621)
|+|+|++|++++.++.+++|+........... ...+....+...+..+.|++++..++.+....
T Consensus 186 ~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 249 (360)
T d1k32a3 186 FDADSKNLYYLSYRSLDPSPDRVVLNFSFEVV----------------SKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL 249 (360)
T ss_dssp ECTTSCEEEEEESCCCCCEECSSSSCEECCSC----------------BEEEEEESSTTCCCGGGCCCGGGSCCCCCCCC
T ss_pred ccCCCCEEEEEeCCCceEcccccccceeeccc----------------cceEEEecccCccccceECCCcCcccccceee
Confidence 99999999999999999999976544321110 00000111122335567888887766544100
Q ss_pred cCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCC
Q psy15549 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHA 401 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 401 (621)
.....++|.+.. .......+..+...+..+.+.+ ......+++.++.++.|++||+.++
T Consensus 250 --~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~i~~~d~~~~ 308 (360)
T d1k32a3 250 --NDMYKRSSPINV------DPGDYRMIIPLESSILIYSVPV-------------HGEFAAYYQGAPEKGVLLKYDVKTR 308 (360)
T ss_dssp --TTGGGGCEECSC------CCBCEEEEEECSSEEEEEECCC-------------CCSHHHHHHCCCCCEEEEEEETTTC
T ss_pred --cccccceeeccc------CcCceeEeeecCCCceEEEEEe-------------cCCCeeEEEecCCCCEEEEEECCCC
Confidence 111112222110 0001111111111111111111 0112234556667889999999987
Q ss_pred ceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCC
Q psy15549 402 SPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVP 452 (621)
Q Consensus 402 ~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~ 452 (621)
+... |...|.+++|||||++|++++.||.|++|++++++....+..
T Consensus 309 ~~~~-----~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~ 354 (360)
T d1k32a3 309 KVTE-----VKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVET 354 (360)
T ss_dssp CEEE-----EEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCC
T ss_pred eEEE-----ecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEEEe
Confidence 6432 445699999999999999999999999999998877665543
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-29 Score=242.70 Aligned_cols=279 Identities=19% Similarity=0.316 Sum_probs=210.5
Q ss_pred cccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccC
Q psy15549 3 CTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQK 82 (621)
Q Consensus 3 ~~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~ 82 (621)
++.......|...|+|++| |++ +||+|+.||.|+ |||+.+++.. .++.+|.+
T Consensus 5 ~~~i~~~~~~~~~V~c~~~--d~~-----~l~sgs~Dg~i~--------------vWd~~~~~~~-------~~l~~H~~ 56 (293)
T d1p22a2 5 LQRIHCRSETSKGVYCLQY--DDQ-----KIVSGLRDNTIK--------------IWDKNTLECK-------RILTGHTG 56 (293)
T ss_dssp CCCEECCCSSCCCEEEEEC--CSS-----EEEEEESSSCEE--------------EEESSSCCEE-------EEECCCSS
T ss_pred EEEEeccCCCCCCEEEEEE--cCC-----EEEEEeCCCeEE--------------EEECCCCcEE-------EEEecCCC
Confidence 3344445567889999876 677 999999999999 9998876543 35889999
Q ss_pred cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 83 AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
.|.+++| ++++|++|+ |+.+++|++..+. .......+... ...+.+....++++..++.+++|+....
T Consensus 57 ~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (293)
T d1p22a2 57 SVLCLQY--DERVIITGSSDSTVRVWDVNTGE-------MLNTLIHHCEA--VLHLRFNNGMMVTCSKDRSIAVWDMASP 125 (293)
T ss_dssp CEEEEEC--CSSEEEEEETTSCEEEEESSSCC-------EEEEECCCCSC--EEEEECCTTEEEEEETTSCEEEEECSSS
T ss_pred CEeeeec--ccceeeccccccccccccccccc-------ccccccccccc--cccccccccceeecccccceeEeecccc
Confidence 9999987 578999988 8889999998763 22222222222 3345556678999999999999998877
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 241 (621)
.... ....+..|...+.++.+.+ ..+++++.|+.|++||+.+++.+..+.++...+..+.
T Consensus 126 ~~~~------------------~~~~~~~~~~~v~~~~~~~--~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 185 (293)
T d1p22a2 126 TDIT------------------LRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 185 (293)
T ss_dssp SCCE------------------EEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred cccc------------------ccccccccccccccceecc--cccccccCCCceeeecCCCCcEEEEEccccccccccc
Confidence 6432 2255678888998888865 4788999999999999999999999999998888877
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccc
Q psy15549 242 WDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCL 321 (621)
Q Consensus 242 ~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~ 321 (621)
++ +.+|++++.||.|++||+++...+.....+.. .+ ..+++++
T Consensus 186 ~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----------------------~v--~~~~~~~---------- 228 (293)
T d1p22a2 186 YR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-----------------------LV--RCIRFDN---------- 228 (293)
T ss_dssp EE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSS-----------------------CE--EEEECCS----------
T ss_pred CC--CCeEEEecCCCEEEEEecccceeeeeecccce-----------------------ee--eeccccc----------
Confidence 76 67899999999999999998876655432111 11 1122233
Q ss_pred cCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCC-
Q psy15549 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQH- 400 (621)
Q Consensus 322 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~- 400 (621)
.++++++.||.|++||+..
T Consensus 229 ------------------------------------------------------------~~l~sg~~dg~i~iwd~~~~ 248 (293)
T d1p22a2 229 ------------------------------------------------------------KRIVSGAYDGKIKVWDLVAA 248 (293)
T ss_dssp ------------------------------------------------------------SEEEEEETTSCEEEEEHHHH
T ss_pred ------------------------------------------------------------eEEEEEcCCCEEEEEECCCC
Confidence 4566666777888887543
Q ss_pred --------CceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 401 --------ASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 401 --------~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
...+..+ .+|.+.|++++| ++++|+|||.||+|+|||
T Consensus 249 ~~~~~~~~~~~~~~~-~~H~~~V~~v~~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 249 LDPRAPAGTLCLRTL-VEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp TSTTSCTTTTEEEEE-CCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred ccccccCCceeeEEe-cCCCCCEEEEEE--cCCEEEEEecCCEEEEeC
Confidence 2344455 579999999999 567899999999999997
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=9.5e-30 Score=255.34 Aligned_cols=320 Identities=12% Similarity=0.129 Sum_probs=209.4
Q ss_pred ccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCc
Q psy15549 4 TIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA 83 (621)
Q Consensus 4 ~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~ 83 (621)
.+......|.+.|++|++++ + +|++|+.|+.|+ |||....+.... .........|...
T Consensus 5 ~~~~~~~~H~~~I~~v~~~~--~-----~l~S~S~D~~ir--------------iWd~~~~~~~~~-~~~~~~~~~~~~~ 62 (393)
T d1sq9a_ 5 ATANAGKAHDADIFSVSACN--S-----FTVSCSGDGYLK--------------VWDNKLLDNENP-KDKSYSHFVHKSG 62 (393)
T ss_dssp EEEEESSCSSSCEEEEEECS--S-----EEEEEETTSEEE--------------EEESBCCTTCCG-GGGEEEEECCTTC
T ss_pred eeeecCCcccCccEEEEEeC--C-----EEEEEECCCeEE--------------EEECCCCCCCcc-cceeEeeeeccCC
Confidence 45566778999999999875 4 899999999999 777654432211 0011112233333
Q ss_pred EEEE------EEcc-CCCEEEEEc-CCceEEEEeccCccccccce---ecccccccCCCeEEEEECCC-----CCEEEEE
Q psy15549 84 VNVV------RFSP-NGELLASGD-DVGKEIWYLTERESGIANVE---FASDLSRHQKAVNVVRFSPN-----GELLASG 147 (621)
Q Consensus 84 V~~l------~~sp-dg~~las~~-d~~v~iw~~~~~~~~~~~~~---~~~~~~~h~~~V~~i~~sp~-----g~~l~s~ 147 (621)
+..+ ..+. ++.++++++ |+.+++|++........... .......+...+..++|.++ +.+++++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (393)
T d1sq9a_ 63 LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT 142 (393)
T ss_dssp EEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEE
T ss_pred ceEeeeEeeeccCCCCCcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEE
Confidence 3322 2222 335677777 99999999876543211111 11112335567888888775 4589999
Q ss_pred eCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Q psy15549 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL 227 (621)
Q Consensus 148 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~ 227 (621)
+.||++++|++.............. ...............+...+.+++|+|++ +|++|+.||.|+|||+.+++++
T Consensus 143 ~~dg~i~vw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~ 218 (393)
T d1sq9a_ 143 DVKGTTYIWKFHPFADESNSLTLNW---SPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPL 218 (393)
T ss_dssp ETTSCEEEEEEESSSSHHHHTTTCC---CCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEE
T ss_pred cCCCcEEEEEeecCCcccceeeeee---ccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccc
Confidence 9999999999865432100000000 00000011122334566778999999998 8999999999999999999887
Q ss_pred EEe------ccCCcceEEEEEcCCCCEEEEEeCCCc---EEEEEccCceeeeecccCCCCCCCccccccccccccccCCc
Q psy15549 228 GIL------TEHKKFVQGVAWDPKNQYVATLSSDRS---LRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298 (621)
Q Consensus 228 ~~~------~~~~~~v~~l~~sp~~~~l~s~~~dg~---i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (621)
..+ .+|...|.+++|+|+|++|++|+.|++ |++||+.+++.+..+........ .......|
T Consensus 219 ~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~----------~~~~~~gH 288 (393)
T d1sq9a_ 219 YNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQ----------ASLGEFAH 288 (393)
T ss_dssp EEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC------------------CCBSB
T ss_pred cccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeecccccccc----------ceeeeecc
Confidence 654 468899999999999999999999874 99999999988877643221110 11122345
Q ss_pred ccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCcc
Q psy15549 299 KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFK 378 (621)
Q Consensus 299 ~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (621)
...|++++|+||+++|++
T Consensus 289 ~~~V~~l~fspd~~~l~S-------------------------------------------------------------- 306 (393)
T d1sq9a_ 289 SSWVMSLSFNDSGETLCS-------------------------------------------------------------- 306 (393)
T ss_dssp SSCEEEEEECSSSSEEEE--------------------------------------------------------------
T ss_pred cCceeeeccCCCCCeeEE--------------------------------------------------------------
Confidence 566777777777666655
Q ss_pred CCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceE----EEEEcCCCCeEEEE
Q psy15549 379 LPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLT----DITWSSDGKVLIAS 430 (621)
Q Consensus 379 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~----~~~~spdg~~l~s~ 430 (621)
++.|++|++||+.+++++..+ .+|...|. .++|+|+|..++++
T Consensus 307 --------~s~D~~v~vWd~~~g~~~~~l-~gH~~~v~~~~~~~~~~~~~~~~~~~ 353 (393)
T d1sq9a_ 307 --------AGWDGKLRFWDVKTKERITTL-NMHCDDIEIEEDILAVDEHGDSLAEP 353 (393)
T ss_dssp --------EETTSEEEEEETTTTEEEEEE-ECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred --------ECCCCEEEEEECCCCCEEEEE-CCcCCcccCCccEEEECCCCCEEEEc
Confidence 447888999999999888887 46877665 46788877776644
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=1e-29 Score=248.79 Aligned_cols=312 Identities=13% Similarity=0.063 Sum_probs=213.9
Q ss_pred ccceeeecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCc
Q psy15549 4 TIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA 83 (621)
Q Consensus 4 ~~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~ 83 (621)
+..++..+|++.|++|+|+|+++ +||+|+.||.|+ |||+........ .....+|.+.
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~-----~L~s~s~Dg~v~--------------iwd~~~~~~~~~----~~~~~~h~~~ 58 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKS-----LLLITSWDGSLT--------------VYKFDIQAKNVD----LLQSLRYKHP 58 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGT-----EEEEEETTSEEE--------------EEEEETTTTEEE----EEEEEECSSC
T ss_pred CeEEcCCCCCCCEEEEEEeCCCC-----EEEEEECCCeEE--------------EEEccCCCcceE----EEEecCCCCC
Confidence 45678899999999999999998 999999999999 998876544222 1223479999
Q ss_pred EEEEEEccCC-CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 84 VNVVRFSPNG-ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 84 V~~l~~spdg-~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
|.+++|+|++ .+|++|+ |+.|++|++..... .......+........+.++...+++++.++.+++||++..
T Consensus 59 V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~ 132 (342)
T d1yfqa_ 59 LLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS------FQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNY 132 (342)
T ss_dssp EEEEEEEESSSEEEEEEETTSCEEEECSSSSSS------EEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHH
T ss_pred EEEEEEeCCCCCEEEEcccccceeeeecccccc------cccccccccccccccccccccccccccccccccceeecccc
Confidence 9999999864 5788877 88999999987632 12222233344455666778889999999999999998766
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecC--CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE---EeccCCcc
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRG--HLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLG---ILTEHKKF 236 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~---~~~~~~~~ 236 (621)
...... ...... .......+.+.+++..+++++.|+.|++||+....... ....+...
T Consensus 133 ~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~ 195 (342)
T d1yfqa_ 133 GDGVIA-----------------VKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQ 195 (342)
T ss_dssp TTBCEE-----------------EEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSC
T ss_pred ccceee-----------------ecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccc
Confidence 543211 111112 22334556677788899999999999999998765322 22334445
Q ss_pred eEEEEEcC-CCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEE
Q psy15549 237 VQGVAWDP-KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315 (621)
Q Consensus 237 v~~l~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 315 (621)
+.+..+.+ ++..+++++.||.+.+|++............. .............+...+++++|+|+++
T Consensus 196 ~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~v~~l~~sp~~~--- 264 (342)
T d1yfqa_ 196 IRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF--------AFRCHRLNLKDTNLAYPVNSIEFSPRHK--- 264 (342)
T ss_dssp EEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE--------EEECCCCCTTCCSSCCCEEEEEECTTTC---
T ss_pred eeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccc--------eeeeeeeccCCCcccccceeEEecCCcc---
Confidence 55555554 67889999999999999987644322111000 0000000011122233344555555544
Q ss_pred eccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEE
Q psy15549 316 APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILL 395 (621)
Q Consensus 316 ~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 395 (621)
+|++++.||.|++
T Consensus 265 -------------------------------------------------------------------~lasg~~Dg~v~v 277 (342)
T d1yfqa_ 265 -------------------------------------------------------------------FLYTAGSDGIISC 277 (342)
T ss_dssp -------------------------------------------------------------------CEEEEETTSCEEE
T ss_pred -------------------------------------------------------------------EEEEECCCCEEEE
Confidence 4555668999999
Q ss_pred EeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy15549 396 YDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISF 441 (621)
Q Consensus 396 wd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~ 441 (621)
||+.+++.+..+...| .+..++|+|+|++|++++.|+++++|..
T Consensus 278 WD~~~~~~l~~~~~~~--~~~~~~~s~~~~~l~~a~sdd~~~~~~~ 321 (342)
T d1yfqa_ 278 WNLQTRKKIKNFAKFN--EDSVVKIACSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EETTTTEEEEECCCCS--SSEEEEEEECSSEEEEEEECTHHHHCSS
T ss_pred EECCCCcEEEEecCCC--CCEEEEEEeCCCEEEEEEcCCcEEEeee
Confidence 9999999888775434 4556788889999999999988888754
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2.7e-29 Score=252.05 Aligned_cols=300 Identities=13% Similarity=0.169 Sum_probs=212.0
Q ss_pred cccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEE------CC-CCCEEEE
Q psy15549 75 SDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRF------SP-NGELLAS 146 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~------sp-~g~~l~s 146 (621)
...++|.+.|+++++++ ++|++++ |+.|+||+.......... ........|...+..+.. +. ++.++++
T Consensus 8 ~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 84 (393)
T d1sq9a_ 8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPK-DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 84 (393)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGG-GGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred ecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCccc-ceeEeeeeccCCceEeeeEeeeccCCCCCcEEEE
Confidence 34689999999999875 6888887 889999997765432111 111122234444333322 21 3347889
Q ss_pred EeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC-----CCEEEEEeCCCeEEEEEC
Q psy15549 147 GDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT-----STHLISGSVDNTAIMWDV 221 (621)
Q Consensus 147 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd-----~~~l~s~~~dg~i~vwd~ 221 (621)
++.||.|++|++........+.... ........+...+..++|.++ +.++++++.||.+++|++
T Consensus 85 ~~~dg~v~~w~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~ 153 (393)
T d1sq9a_ 85 TSFSGDLLFYRITREDETKKVIFEK-----------LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKF 153 (393)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEE-----------ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEE
T ss_pred EeCCCcEEEEEccCCCceeeeeccc-----------cceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEe
Confidence 9999999999987765543220000 000111235566788888775 467899999999999998
Q ss_pred CCCc------------------EEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCcc
Q psy15549 222 HKGK------------------NLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSH 283 (621)
Q Consensus 222 ~~~~------------------~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 283 (621)
.... .......+...+.+++|+|++ +|++|+.||+|++||+.+++.+..+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~------- 225 (393)
T d1sq9a_ 154 HPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQH------- 225 (393)
T ss_dssp ESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-------
T ss_pred ecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeeccccccccccccc-------
Confidence 5321 111122355668899999997 89999999999999999998876654221
Q ss_pred ccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccc
Q psy15549 284 ELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCP 363 (621)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (621)
....|...|.+++|+|||++|++++ .|++
T Consensus 226 ----------~l~~h~~~V~~l~~spdg~~l~sgs-----~D~t------------------------------------ 254 (393)
T d1sq9a_ 226 ----------SMINNSNSIRSVKFSPQGSLLAIAH-----DSNS------------------------------------ 254 (393)
T ss_dssp -------------CCCCCEEEEEECSSTTEEEEEE-----EETT------------------------------------
T ss_pred ----------ccccccceEEEcccccccceeeeec-----CCCC------------------------------------
Confidence 1234667789999999999888876 2211
Q ss_pred eeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEe------------cccccceEEEEEcCCCCeEEEEe
Q psy15549 364 VLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIA------------NIHYTKLTDITWSSDGKVLIASS 431 (621)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------------~~h~~~v~~~~~spdg~~l~s~s 431 (621)
.+.|++||+.+++.+..+. .+|...|++++|+|||++|++|+
T Consensus 255 --------------------------~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s 308 (393)
T d1sq9a_ 255 --------------------------FGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 308 (393)
T ss_dssp --------------------------EEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred --------------------------cceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEEC
Confidence 1347778887777666553 36999999999999999999999
Q ss_pred CCCcEEEEEecCCcCCcccCCCCCccc----ccCCCCCCCCcccCC
Q psy15549 432 TDGYCSIISFGDNEIGIPYVPPSGEES----KENDPTKGEPVRSED 473 (621)
Q Consensus 432 ~dg~i~iw~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~s~~ 473 (621)
.||+|+|||+.+++++..+.+|...+. .+.+++++..+++.+
T Consensus 309 ~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~ 354 (393)
T d1sq9a_ 309 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 354 (393)
T ss_dssp TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred CCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEcc
Confidence 999999999999999999999987765 467888888776554
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=2.2e-29 Score=240.99 Aligned_cols=270 Identities=16% Similarity=0.129 Sum_probs=215.1
Q ss_pred eeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC
Q psy15549 72 EFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE 150 (621)
Q Consensus 72 ~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d 150 (621)
++++++.+|..+|++++|+| |++|+ |+.|++|++... ..+|...|.+++|++++ .+++++.|
T Consensus 4 ~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~------------~~~h~~~V~~~~~~~~~-~~~s~s~D 66 (287)
T d1pgua2 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM------------HQDHSNLIVSLDNSKAQ-EYSSISWD 66 (287)
T ss_dssp EEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEE------------ECCCCSCEEEEECCSTT-CCEEEETT
T ss_pred ceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCC------------CCCCCCCEEEEEecCCC-eEEEEeec
Confidence 45667999999999999998 77777 999999987643 24789999999998764 67899999
Q ss_pred CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q psy15549 151 STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 151 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~ 230 (621)
++|++|++...+ ....+.++.+++++..++++ .++.+.+|+..+++.+..+
T Consensus 67 ~~v~~w~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 117 (287)
T d1pgua2 67 DTLKVNGITKHE----------------------------FGSQPKVASANNDGFTAVLT-NDDDLLILQSFTGDIIKSV 117 (287)
T ss_dssp TEEEETTEEEEE----------------------------CSSCEEEEEECSSSEEEEEE-TTSEEEEEETTTCCEEEEE
T ss_pred cccccccccccc----------------------------cccceeeeeeccCCceEEEe-ecccceeeeccceeeeeec
Confidence 999999976542 23357788999888766665 4667899999999988887
Q ss_pred ccCCcceEEEEEcCCCCEEEEEeCCC-cEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC
Q psy15549 231 TEHKKFVQGVAWDPKNQYVATLSSDR-SLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309 (621)
Q Consensus 231 ~~~~~~v~~l~~sp~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 309 (621)
..+ .. ..++++++..+++++.++ .+++|++...+....+. ..+...+.+++|+|
T Consensus 118 ~~~-~~--~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~----------------------~~~~~~v~~~~~s~ 172 (287)
T d1pgua2 118 RLN-SP--GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLK----------------------TPLRAKPSYISISP 172 (287)
T ss_dssp ECS-SC--EEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECS----------------------SCCSSCEEEEEECT
T ss_pred ccc-ce--eeeeeccCcceeeeccccceeeeeeccccceeeeee----------------------eccCCceeEEEecc
Confidence 643 33 346677888888888875 79999997665544332 12345678899999
Q ss_pred CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc
Q psy15549 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT 389 (621)
Q Consensus 310 dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (621)
++.+|++++ .
T Consensus 173 ~~~~l~~g~----------------------------------------------------------------------~ 182 (287)
T d1pgua2 173 SETYIAAGD----------------------------------------------------------------------V 182 (287)
T ss_dssp TSSEEEEEE----------------------------------------------------------------------T
T ss_pred Ccccccccc----------------------------------------------------------------------c
Confidence 888877655 6
Q ss_pred CCcEEEEeCCCCceeEEEecccccceEEEEEcCC----------CCeEEEEeCCCcEEEEEecC-CcCCcccCCCCCccc
Q psy15549 390 ENNILLYDTQHASPFAFIANIHYTKLTDITWSSD----------GKVLIASSTDGYCSIISFGD-NEIGIPYVPPSGEES 458 (621)
Q Consensus 390 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spd----------g~~l~s~s~dg~i~iw~~~~-~~~~~~~~~~~~~~~ 458 (621)
||.|++||+.++........+|...|++++|+|+ +.+|++|+.|++|++|++.. ++....+.+|...+.
T Consensus 183 dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~ 262 (287)
T d1pgua2 183 MGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVN 262 (287)
T ss_dssp TSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEE
T ss_pred cccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeE
Confidence 7889999998887766555679999999999875 46899999999999999976 566777788999999
Q ss_pred ccCCCCCCCCcccCCCcccHHHhcc
Q psy15549 459 KENDPTKGEPVRSEDKPRSAEQAKG 483 (621)
Q Consensus 459 ~~~~~~~~~~~~s~~~~~~~~~w~~ 483 (621)
.+.+++++ .+++++.|+.+++|+.
T Consensus 263 ~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 263 NLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp EEEEEETT-EEEEEETTSCEEEEEE
T ss_pred EEEECCCC-EEEEEECCCeEEEEEE
Confidence 99999876 5888999999999974
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=5.3e-29 Score=243.69 Aligned_cols=307 Identities=10% Similarity=0.024 Sum_probs=220.4
Q ss_pred eecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEE
Q psy15549 120 EFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDIS 199 (621)
Q Consensus 120 ~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 199 (621)
+.++..++|.+.|++|+|+|++++||+|+.||+|+|||+........ .....+|...|.+++
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~------------------~~~~~~h~~~V~~v~ 63 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVD------------------LLQSLRYKHPLLCCN 63 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEE------------------EEEEEECSSCEEEEE
T ss_pred CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceE------------------EEEecCCCCCEEEEE
Confidence 45667789999999999999999999999999999999987764321 133447999999999
Q ss_pred ECCCC-CEEEEEeCCCeEEEEECCCCcEEEEeccCCcc-eEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCC
Q psy15549 200 WSPTS-THLISGSVDNTAIMWDVHKGKNLGILTEHKKF-VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKL 277 (621)
Q Consensus 200 ~spd~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 277 (621)
|+|++ .+|++|+.||.|++|++..+........+... .....+.++...+++++.++.+++||++.+...........
T Consensus 64 f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~ 143 (342)
T d1yfqa_ 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN 143 (342)
T ss_dssp EEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESC
T ss_pred EeCCCCCEEEEcccccceeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccc
Confidence 99864 58999999999999999988777666554443 34556677889999999999999999876543322211100
Q ss_pred CCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCccccee
Q psy15549 278 PVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSV 357 (621)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (621)
..........+.+.+++..+++++ .|+.+++|++...... ..............
T Consensus 144 -----------------~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~i~~~~~~~~~~~----~~~~~~~~~~~~~~ 197 (342)
T d1yfqa_ 144 -----------------SNNTKVKNKIFTMDTNSSRLIVGM-----NNSQVQWFRLPLCEDD----NGTIEESGLKYQIR 197 (342)
T ss_dssp -----------------SSSSSSCCCEEEEEECSSEEEEEE-----STTEEEEEESSCCTTC----CCEEEECSCSSCEE
T ss_pred -----------------cccccceeeeeeeeccCCceeeec-----CCCcEEEEecccCccc----ceeeeeccccccee
Confidence 001112235567888889999988 8999999987532111 01111111112222
Q ss_pred eeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE------EE--------ecccccceEEEEEcCC
Q psy15549 358 AVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA------FI--------ANIHYTKLTDITWSSD 423 (621)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~------~~--------~~~h~~~v~~~~~spd 423 (621)
...+.+ .++..+++++.||.+.+|+........ .. ...|...|++++|+|+
T Consensus 198 ~~~~~~---------------~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~ 262 (342)
T d1yfqa_ 198 DVALLP---------------KEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR 262 (342)
T ss_dssp EEEECS---------------GGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTT
T ss_pred eeEeec---------------CCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCC
Confidence 222221 245678899999999999976542111 11 1246678999999999
Q ss_pred CCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhcccCc
Q psy15549 424 GKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 424 g~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~~ 486 (621)
+++||||+.||.|++||+.+++.+..+..+. ......+++++..++.+..+...+.|....+
T Consensus 263 ~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~-~~~~~~~s~~~~~l~~a~sdd~~~~~~~~~~ 324 (342)
T d1yfqa_ 263 HKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-EDSVVKIACSDNILCLATSDDTFKTNAAIDQ 324 (342)
T ss_dssp TCCEEEEETTSCEEEEETTTTEEEEECCCCS-SSEEEEEEECSSEEEEEEECTHHHHCSSSCT
T ss_pred ccEEEEECCCCEEEEEECCCCcEEEEecCCC-CCEEEEEEeCCCEEEEEEcCCcEEEeeeeCC
Confidence 9999999999999999999998887775532 3445678889999998888889999875444
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=3.3e-29 Score=247.96 Aligned_cols=319 Identities=11% Similarity=0.062 Sum_probs=229.4
Q ss_pred EEEEcc-CCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCC--cEEEEEccCCC
Q psy15549 86 VVRFSP-NGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES--TIIVWKQKTDQ 162 (621)
Q Consensus 86 ~l~~sp-dg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg--~i~vwd~~~~~ 162 (621)
.-.||| ||+++|+++++.|.+|+...+ ...+ + +|...|.+++|+|||++|++++.+. .|++||+.++.
T Consensus 7 ~~~fSP~dG~~~a~~~~g~v~v~d~~~~-------~~~~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~ 77 (360)
T d1k32a3 7 AEDFSPLDGDLIAFVSRGQAFIQDVSGT-------YVLK-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK 77 (360)
T ss_dssp EEEEEECGGGCEEEEETTEEEEECTTSS-------BEEE-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC
T ss_pred cccccCCCCCEEEEEECCeEEEEECCCC-------cEEE-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCc
Confidence 456999 999999999999999998765 3232 2 6899999999999999998876553 79999998876
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAW 242 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~ 242 (621)
. ..+..|...|.+++|+||+++|++++.++.+++|++.+++....+..|...+.+++|
T Consensus 78 ~----------------------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (360)
T d1k32a3 78 A----------------------EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTI 135 (360)
T ss_dssp E----------------------EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEE
T ss_pred E----------------------EEeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhh
Confidence 3 556789999999999999999999999999999999999999999899999999999
Q ss_pred cCCCCEEEEEeC----------CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC
Q psy15549 243 DPKNQYVATLSS----------DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312 (621)
Q Consensus 243 sp~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 312 (621)
+|+|++|+.+.. ++.+++|++.+++..... .+...+..++|+|||+
T Consensus 136 spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~------------------------~~~~~~~~~~~spdg~ 191 (360)
T d1k32a3 136 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT------------------------TENSHDYAPAFDADSK 191 (360)
T ss_dssp CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS------------------------CSSSBEEEEEECTTSC
T ss_pred ccceeeeeeeccccccceeeccccceeeeccccCceeeec------------------------ccccccccccccCCCC
Confidence 999999986543 456899999887765433 2233457899999999
Q ss_pred eEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC--
Q psy15549 313 LLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE-- 390 (621)
Q Consensus 313 ~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-- 390 (621)
+|++++ .++.+.+|+................+..+......+.+.+ ++..+.++..+
T Consensus 192 ~l~~~s-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~----------------~~~~~~~~~~~~~ 250 (360)
T d1k32a3 192 NLYYLS-----YRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVP----------------RSMTSEAGEYDLN 250 (360)
T ss_dssp EEEEEE-----SCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCC----------------GGGSCCCCCCCCT
T ss_pred EEEEEe-----CCCceEcccccccceeeccccceEEEecccCccccceECC----------------CcCcccccceeec
Confidence 999988 7888888875422111100000011111111111122222 22222222221
Q ss_pred ---CcEEEEeCCCCceeEEEecccccceEEEEEcCCC---CeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCC
Q psy15549 391 ---NNILLYDTQHASPFAFIANIHYTKLTDITWSSDG---KVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPT 464 (621)
Q Consensus 391 ---g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg---~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (621)
..+..++...+.... + ..+...+..+.+.+.+ .++++++.++.|++||+.+++.. .+...+..+.|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~~~~~v~~~~~Sp 324 (360)
T d1k32a3 251 DMYKRSSPINVDPGDYRM-I-IPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT----EVKNNLTDLRLSA 324 (360)
T ss_dssp TGGGGCEECSCCCBCEEE-E-EECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE----EEEEEEEEEEECT
T ss_pred ccccceeecccCcCceeE-e-eecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEE----EecCCcCEEEECC
Confidence 234444445444332 2 2345556666665554 46888999999999999987643 2334577889999
Q ss_pred CCCCcccCCCcccHHHhcccCc
Q psy15549 465 KGEPVRSEDKPRSAEQAKGEGK 486 (621)
Q Consensus 465 ~~~~~~s~~~~~~~~~w~~~~~ 486 (621)
||+.+++.+.||.+++|+++..
T Consensus 325 DG~~l~~~~~Dg~i~v~d~~~~ 346 (360)
T d1k32a3 325 DRKTVMVRKDDGKIYTFPLEKP 346 (360)
T ss_dssp TSCEEEEEETTSCEEEEESSCT
T ss_pred CCCEEEEEECCCeEEEEECCCC
Confidence 9999999999999999997654
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=4.4e-27 Score=224.71 Aligned_cols=272 Identities=19% Similarity=0.264 Sum_probs=207.9
Q ss_pred cccccccCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcE
Q psy15549 75 SDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTI 153 (621)
Q Consensus 75 ~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i 153 (621)
.....|...|+|++ +||++||+|+ |+.|+||++..+ +.+..+.+|...|++++| ++++|++|+.|+.|
T Consensus 9 ~~~~~~~~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~-------~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i 77 (293)
T d1p22a2 9 HCRSETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTL-------ECKRILTGHTGSVLCLQY--DERVIITGSSDSTV 77 (293)
T ss_dssp ECCCSSCCCEEEEE--CCSSEEEEEESSSCEEEEESSSC-------CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCE
T ss_pred eccCCCCCCEEEEE--EcCCEEEEEeCCCeEEEEECCCC-------cEEEEEecCCCCEeeeec--ccceeecccccccc
Confidence 34567888999876 4799999998 889999999876 677888999999999987 57899999999999
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcE---EEEe
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN---LGIL 230 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~---~~~~ 230 (621)
++|++..+... .....+... ...+.+....++++..++.+.+|+..+... ...+
T Consensus 78 ~~~~~~~~~~~---------------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (293)
T d1p22a2 78 RVWDVNTGEML---------------------NTLIHHCEA--VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVL 134 (293)
T ss_dssp EEEESSSCCEE---------------------EEECCCCSC--EEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEE
T ss_pred ccccccccccc---------------------ccccccccc--cccccccccceeecccccceeEeeccccccccccccc
Confidence 99999888643 222222222 233445566899999999999999987553 4455
Q ss_pred ccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCC
Q psy15549 231 TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310 (621)
Q Consensus 231 ~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spd 310 (621)
..|...+..+.+. ...+++++.|+.|++||+++++.+..+..+.. .+..+.+
T Consensus 135 ~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~-----------------------~v~~~~~--- 186 (293)
T d1p22a2 135 VGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR-----------------------GIACLQY--- 186 (293)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCEEEEEECCSS-----------------------CEEEEEE---
T ss_pred cccccccccceec--ccccccccCCCceeeecCCCCcEEEEEccccc-----------------------ccccccC---
Confidence 6788888877776 56788999999999999998877655432111 1111111
Q ss_pred CCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcC
Q psy15549 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATE 390 (621)
Q Consensus 311 g~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 390 (621)
.+..+++++.|
T Consensus 187 ---------------------------------------------------------------------~~~~l~~~~~d 197 (293)
T d1p22a2 187 ---------------------------------------------------------------------RDRLVVSGSSD 197 (293)
T ss_dssp ---------------------------------------------------------------------ETTEEEEEETT
T ss_pred ---------------------------------------------------------------------CCCeEEEecCC
Confidence 12457777899
Q ss_pred CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCc---------CCcccCCCCCcccccC
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE---------IGIPYVPPSGEESKEN 461 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~---------~~~~~~~~~~~~~~~~ 461 (621)
+.|++||+.+...+.... +|...+.. +++++.+|++++.||.|++||+..+. ....+.+|...+..+.
T Consensus 198 g~i~i~d~~~~~~~~~~~-~~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~ 274 (293)
T d1p22a2 198 NTIRLWDIECGACLRVLE-GHEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 274 (293)
T ss_dssp SCEEEEETTTCCEEEEEC-CCSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEE
T ss_pred CEEEEEecccceeeeeec-ccceeeee--ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEE
Confidence 999999999999888774 57777765 55678899999999999999987543 3345667777787776
Q ss_pred CCCCCCCcccCCCcccHHHhc
Q psy15549 462 DPTKGEPVRSEDKPRSAEQAK 482 (621)
Q Consensus 462 ~~~~~~~~~s~~~~~~~~~w~ 482 (621)
+ ++..+++++.|+.|++|+
T Consensus 275 ~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 275 F--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp E--CSSCEEECCSSSEEEEEC
T ss_pred E--cCCEEEEEecCCEEEEeC
Confidence 6 567899999999999996
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.94 E-value=5.8e-26 Score=229.32 Aligned_cols=349 Identities=12% Similarity=0.006 Sum_probs=236.0
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc-CCceEEEEec
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLT 110 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~-d~~v~iw~~~ 110 (621)
++++.+.+|.|. |||..+++.... +..| ..+..++|||||++|++++ |+.+.+||+.
T Consensus 34 ~~v~~~d~g~v~--------------v~D~~t~~v~~~-------~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~ 91 (432)
T d1qksa2 34 FSVTLRDAGQIA--------------LIDGSTYEIKTV-------LDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLW 91 (432)
T ss_dssp EEEEETTTTEEE--------------EEETTTCCEEEE-------EECS-SCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred EEEEEcCCCEEE--------------EEECCCCcEEEE-------EeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEee
Confidence 679999999999 999887766443 6555 4699999999999999988 8899999998
Q ss_pred cCccccccceecccccccCCCeEEEEECCCCCEE-EEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeec
Q psy15549 111 ERESGIANVEFASDLSRHQKAVNVVRFSPNGELL-ASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR 189 (621)
Q Consensus 111 ~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l-~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (621)
.+... ....+....+|.+.+.+..|+|||++| ++++.++.|++||..+++.+..+....... .....
T Consensus 92 t~~~~--~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~----------~~~~~ 159 (432)
T d1qksa2 92 MKEPT--TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTY----------DEQEY 159 (432)
T ss_dssp SSSCC--EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECT----------TTCCE
T ss_pred CCCce--EEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccc----------cceec
Confidence 76321 112233345677777888889999976 678889999999999887653321100000 00112
Q ss_pred CCCCCeEEEEECCCCCEEE-EEeCCCeEEEEECCCCcEEEEec-cCCcceEEEEEcCCCCEEEEEeC-CCcEEEEEccCc
Q psy15549 190 GHLEDVYDISWSPTSTHLI-SGSVDNTAIMWDVHKGKNLGILT-EHKKFVQGVAWDPKNQYVATLSS-DRSLRTYSIQSK 266 (621)
Q Consensus 190 ~~~~~v~~i~~spd~~~l~-s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~l~~sp~~~~l~s~~~-dg~i~iwd~~~~ 266 (621)
.+......+.++|+|..++ +...++.|.+||..+++...... .+...+..++|+|+|+++++++. ++.+.++|..++
T Consensus 160 ~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~ 239 (432)
T d1qksa2 160 HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG 239 (432)
T ss_dssp ESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred cCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccc
Confidence 3556678899999998765 55667999999998877554332 34566889999999999887776 457999999988
Q ss_pred eeeeecccCCCCCCCccc----------------ccccccccccc-----CCcccceeeeeecCCCCeEEeccccccCCC
Q psy15549 267 KVISRACRSKLPVDSSHE----------------LFDKVVPLFHD-----DTMKSFFRRLTFSPDGQLLIAPSGCLENSD 325 (621)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~-----~~~~~~i~~~~~spdg~~l~~~s~~~~~~d 325 (621)
+.+..+............ ..+.....+.. ..+...+....++|++..+++++ .+
T Consensus 240 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s-----~p 314 (432)
T d1qksa2 240 KLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKT-----HP 314 (432)
T ss_dssp EEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEEC-----CT
T ss_pred eEEEEeccCccccccCcccceecCCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEe-----cC
Confidence 877665433322111100 00111111111 11223456677777777777776 67
Q ss_pred CCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeE
Q psy15549 326 STRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFA 405 (621)
Q Consensus 326 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 405 (621)
...++|.... +..+...... +..+++..+++++.|+.+++|++.++..+
T Consensus 315 ~~~~lw~~~~-------------~~~~~~~~~s-----------------v~vpDg~~la~~s~d~~~k~w~~~~~~~l- 363 (432)
T d1qksa2 315 NSQYLYVDAT-------------LNPEAEISGS-----------------VAVFDIKAMTGDGSDPEFKTLPIAEWAGI- 363 (432)
T ss_dssp TCSEEEEECT-------------TCSSHHHHTC-----------------EEEEEGGGCCCSSSCCCEEEECHHHHHTC-
T ss_pred Cccceeeccc-------------CCCCCCeeeE-----------------EEEEechhhcccccCCceEeccccccccc-
Confidence 7777775431 0111111111 11235677888899999999998665433
Q ss_pred EEecccccceEEEEEcCCCCeEEEEe-----CCCcEEEEEecCCcCCcccCCC
Q psy15549 406 FIANIHYTKLTDITWSSDGKVLIASS-----TDGYCSIISFGDNEIGIPYVPP 453 (621)
Q Consensus 406 ~~~~~h~~~v~~~~~spdg~~l~s~s-----~dg~i~iw~~~~~~~~~~~~~~ 453 (621)
..|...|..++|||||++|+.+. .+|.|.|||..++++...+..+
T Consensus 364 ---~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~i~~~ 413 (432)
T d1qksa2 364 ---TEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKDE 413 (432)
T ss_dssp ---CSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred ---CCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEEeEecCC
Confidence 23667899999999999886554 4688999999999987777654
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.94 E-value=3.4e-25 Score=224.19 Aligned_cols=360 Identities=11% Similarity=0.034 Sum_probs=239.1
Q ss_pred EeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEE
Q psy15549 19 VDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS 98 (621)
Q Consensus 19 l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las 98 (621)
+.++.|.+ ..++++.+.||.|+ |||+.+++... ++..| ..+..++|||||++|++
T Consensus 24 ~~~~~d~~---~~~~V~~~~dg~v~--------------vwD~~t~~~~~-------~l~~g-~~~~~vafSPDGk~l~~ 78 (426)
T d1hzua2 24 QLNDLDLP---NLFSVTLRDAGQIA--------------LVDGDSKKIVK-------VIDTG-YAVHISRMSASGRYLLV 78 (426)
T ss_dssp CCSCCCGG---GEEEEEETTTTEEE--------------EEETTTCSEEE-------EEECC-SSEEEEEECTTSCEEEE
T ss_pred ccccCCCC---eEEEEEEcCCCEEE--------------EEECCCCcEEE-------EEeCC-CCeeEEEECCCCCEEEE
Confidence 34555543 23668889999999 99988776543 36665 45999999999999999
Q ss_pred Ec-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEE-EeCCCcEEEEEccCCCCCCCCCCCCccccc
Q psy15549 99 GD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS-GDDESTIIVWKQKTDQDLPEFPSSNLDEEN 176 (621)
Q Consensus 99 ~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s-~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 176 (621)
++ |+.+++||+.++... ....+....+|...+.+++|+|||++|++ +..++.+++||..++.....+......
T Consensus 79 ~~~d~~v~vwd~~t~~~~--~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~--- 153 (426)
T d1hzua2 79 IGRDARIDMIDLWAKEPT--KVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT--- 153 (426)
T ss_dssp EETTSEEEEEETTSSSCE--EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC---
T ss_pred EeCCCCEEEEEccCCcee--EEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCC---
Confidence 88 888999999877421 11123334567777888899999998755 458899999999988754222100000
Q ss_pred ccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEE-EEeccCCcceEEEEEcCCCCEEEEEeC
Q psy15549 177 VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNL-GILTEHKKFVQGVAWDPKNQYVATLSS 254 (621)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~-~~~~~~~~~v~~l~~sp~~~~l~s~~~ 254 (621)
.......+......+.+++++..++.... .+.+.+++....... .....+...+..+.|+|++++++++..
T Consensus 154 -------~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~ 226 (426)
T d1hzua2 154 -------VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAAN 226 (426)
T ss_dssp -------SSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEET
T ss_pred -------ccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeee
Confidence 00011224455677888888887776555 466777776665432 233357778899999999999887765
Q ss_pred -CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceee
Q psy15549 255 -DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISV 333 (621)
Q Consensus 255 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~ 333 (621)
+..+.+++..+++.+........+..... ..........+....+++++...+... .......|..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~d~~v~~~~~-----~~~~~~~~~~ 293 (426)
T d1hzua2 227 NSNKVAVIDSKDRRLSALVDVGKTPHPGRG--------ANFVHPKYGPVWSTSHLGDGSISLIGT-----DPKNHPQYAW 293 (426)
T ss_dssp TCSEEEEEETTTTEEEEEEECSSCCCCSCC--------EEEEETTTEEEEEEECTTTCEEEEEEC-----CTTTCTTTBT
T ss_pred cccceeeeecccccEEEEeccCCcccccce--------eeeecCCCCceEEeccCCCceEEEeec-----cccccccccc
Confidence 56799999999998877654433221110 111112233445556666666655554 3333333321
Q ss_pred eeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEE-------EEcCCcEEEEeCCCCceeEE
Q psy15549 334 THVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIA-------VATENNILLYDTQHASPFAF 406 (621)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~ 406 (621)
.....+.+|...+..+.|+| ++.++++ +..+++|++||+.+++....
T Consensus 294 ----------~~~~~l~g~~~~v~~v~~sP----------------dg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~ 347 (426)
T d1hzua2 294 ----------KKVAELQGQGGGSLFIKTHP----------------KSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQ 347 (426)
T ss_dssp ----------SEEEEEECSSSCCCCEECCT----------------TCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCE
T ss_pred ----------eEeEEEecCCCceeEEEcCC----------------CCceEEEeecCCCCcccCCEEEEEECCCCCcCeE
Confidence 12234556666677777777 6677774 33578999999999987765
Q ss_pred Eec--------ccccceEEEEEcCCCCeEEEE-----eCCCcEEEEEecCCcCCcccCCCC
Q psy15549 407 IAN--------IHYTKLTDITWSSDGKVLIAS-----STDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 407 ~~~--------~h~~~v~~~~~spdg~~l~s~-----s~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
+.. .|...|..++|||||++|+.+ +.+|.|+|||..++++...+..+.
T Consensus 348 ~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~ 408 (426)
T d1hzua2 348 VLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR 408 (426)
T ss_dssp EECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred EeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCC
Confidence 521 355679999999999977543 357889999999999877776653
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.93 E-value=2.3e-25 Score=225.41 Aligned_cols=354 Identities=9% Similarity=-0.001 Sum_probs=218.7
Q ss_pred EccCC--CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 89 FSPNG--ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 89 ~spdg--~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
++.|. .++++.+ ++.|+|||+.++ +.+..+..|. .+..++|+|||++|++++.|++|++||+.+++...
T Consensus 26 ~~~d~~~~~~V~~~~dg~v~vwD~~t~-------~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~ 97 (426)
T d1hzua2 26 NDLDLPNLFSVTLRDAGQIALVDGDSK-------KIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK 97 (426)
T ss_dssp SCCCGGGEEEEEETTTTEEEEEETTTC-------SEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE
T ss_pred ccCCCCeEEEEEEcCCCEEEEEECCCC-------cEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeE
Confidence 44443 3556666 788999999987 6677777764 58999999999999999999999999999887531
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCcEEEEeccCCcceEEEEEcC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp 244 (621)
.. ......+|...+.+++|+|||++|+++ ..++.+.+||..++.++..+..|...+..+.+.+
T Consensus 98 ~~----------------~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 161 (426)
T d1hzua2 98 VA----------------EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHP 161 (426)
T ss_dssp EE----------------EEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEES
T ss_pred EE----------------EEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecC
Confidence 11 012233566667788899999987554 5789999999999999888877766665555655
Q ss_pred CCCE-EEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccC
Q psy15549 245 KNQY-VATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLEN 323 (621)
Q Consensus 245 ~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~ 323 (621)
++.. .+..+.|+...++.......+..+....... ...........+..+.|+|++++++++..
T Consensus 162 ~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~g~~~~~a~~---- 226 (426)
T d1hzua2 162 EPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN-----------LTVTSIGAAPFLADGGWDSSHRYFMTAAN---- 226 (426)
T ss_dssp CCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSS-----------CEEEEEECCSSEEEEEECTTSCEEEEEET----
T ss_pred CCceeEEEECCCCCEEEEecCCCCeEEEEEeccccc-----------eeeEEeccCCccEeeeECCCCcEEEeeee----
Confidence 5543 2344445554444433322221111111000 00011122345688999999999988763
Q ss_pred CCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE--EcCCcEEEEeCCCC
Q psy15549 324 SDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV--ATENNILLYDTQHA 401 (621)
Q Consensus 324 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~dg~i~iwd~~~~ 401 (621)
.+..+.+++............. ..........+. ......+.+. ..++.+.+|+....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---------------~~~~~~~~~~~~~~d~~v~~~~~~~~ 286 (426)
T d1hzua2 227 NSNKVAVIDSKDRRLSALVDVG-----KTPHPGRGANFV---------------HPKYGPVWSTSHLGDGSISLIGTDPK 286 (426)
T ss_dssp TCSEEEEEETTTTEEEEEEECS-----SCCCCSCCEEEE---------------ETTTEEEEEEECTTTCEEEEEECCTT
T ss_pred cccceeeeecccccEEEEeccC-----Ccccccceeeee---------------cCCCCceEEeccCCCceEEEeecccc
Confidence 3344444443321111100000 000000000000 0011222222 24778888876543
Q ss_pred -------ceeEEEecccccceEEEEEcCCCCeEEE-------EeCCCcEEEEEecCCcCCcccC---------CCCCccc
Q psy15549 402 -------SPFAFIANIHYTKLTDITWSSDGKVLIA-------SSTDGYCSIISFGDNEIGIPYV---------PPSGEES 458 (621)
Q Consensus 402 -------~~~~~~~~~h~~~v~~~~~spdg~~l~s-------~s~dg~i~iw~~~~~~~~~~~~---------~~~~~~~ 458 (621)
+....+ .+|...+..++|+|||++|++ ++.|++|+|||+.+++....+. .+...+.
T Consensus 287 ~~~~~~~~~~~~l-~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~ 365 (426)
T d1hzua2 287 NHPQYAWKKVAEL-QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVV 365 (426)
T ss_dssp TCTTTBTSEEEEE-ECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEE
T ss_pred ccccccceEeEEE-ecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEE
Confidence 555566 469999999999999999994 4568899999999998765542 2334466
Q ss_pred ccCCCCCCCCc-c----cCCCcccHHHhcccCc-cccccccCCCCCCCcc
Q psy15549 459 KENDPTKGEPV-R----SEDKPRSAEQAKGEGK-VLGEKQTGNKVSPTDK 502 (621)
Q Consensus 459 ~~~~~~~~~~~-~----s~~~~~~~~~w~~~~~-~~~~~~~~~~~s~~~~ 502 (621)
.+.|+|||+.+ + ..+.++.|.+|+.... ......+...++|+|+
T Consensus 366 ~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~~~tp~Gk 415 (426)
T d1hzua2 366 QPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTGK 415 (426)
T ss_dssp EEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTTCCSEEEE
T ss_pred EEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCCccCCCce
Confidence 67899999966 2 2457888999986544 3333443344555553
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.92 E-value=1.6e-22 Score=193.97 Aligned_cols=274 Identities=15% Similarity=0.135 Sum_probs=206.5
Q ss_pred EEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEE-Ec-CCceEEEEe
Q psy15549 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS-GD-DVGKEIWYL 109 (621)
Q Consensus 32 ~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las-~~-d~~v~iw~~ 109 (621)
..++++.|+.|. +||+.+++.... +. ....+..++|+|||++|++ +. ++.|.+||+
T Consensus 4 ~yV~~~~~~~v~--------------v~D~~t~~~~~~-------i~-~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~ 61 (301)
T d1l0qa2 4 AYIANSESDNIS--------------VIDVTSNKVTAT-------IP-VGSNPMGAVISPDGTKVYVANAHSNDVSIIDT 61 (301)
T ss_dssp EEEEETTTTEEE--------------EEETTTTEEEEE-------EE-CSSSEEEEEECTTSSEEEEEEGGGTEEEEEET
T ss_pred EEEEECCCCEEE--------------EEECCCCeEEEE-------EE-CCCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 456778899999 888877754322 33 2345789999999998854 44 788999999
Q ss_pred ccCccccccceecccccccCCCeEEEEECCCCCEEEE-EeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeee
Q psy15549 110 TERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS-GDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL 188 (621)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s-~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (621)
..+ ..+..+..|. .+..++|++++.++++ +..++.+.+|+..+++.. ..+
T Consensus 62 ~t~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~ 112 (301)
T d1l0qa2 62 ATN-------NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA---------------------GTV 112 (301)
T ss_dssp TTT-------EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE---------------------EEE
T ss_pred CCC-------ceeeeeeccc-cccccccccccccccccccccceeeecccccceee---------------------eec
Confidence 877 5556666554 4688999999986554 556788999999887643 222
Q ss_pred cCCCCCeEEEEECCCCCEEEE-EeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCC-CcEEEEEccCc
Q psy15549 189 RGHLEDVYDISWSPTSTHLIS-GSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSD-RSLRTYSIQSK 266 (621)
Q Consensus 189 ~~~~~~v~~i~~spd~~~l~s-~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~d-g~i~iwd~~~~ 266 (621)
.+...+.++.|+|++..++. +..++.+.+|+..++..+..+..+ ..+..++++|++.++++++.+ +.+.+|+....
T Consensus 113 -~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (301)
T d1l0qa2 113 -KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (301)
T ss_dssp -ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred -cccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccC-CCceEEEeeccccceeeecccccccccccccce
Confidence 34456789999999987765 555788999999999988887644 457889999999998888765 56778887776
Q ss_pred eeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCc
Q psy15549 267 KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPA 346 (621)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 346 (621)
.....+.. ......++|++++..++++..
T Consensus 191 ~~~~~~~~------------------------~~~~~~~~~~~~g~~~~v~~~--------------------------- 219 (301)
T d1l0qa2 191 SVIDTVKV------------------------EAAPSGIAVNPEGTKAYVTNV--------------------------- 219 (301)
T ss_dssp EEEEEEEC------------------------SSEEEEEEECTTSSEEEEEEE---------------------------
T ss_pred eeeecccc------------------------cCCcceeeccccccccccccc---------------------------
Confidence 66554421 123467888898888765441
Q ss_pred eecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCe
Q psy15549 347 VCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKV 426 (621)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~ 426 (621)
...++.|++||+.+++.+..+. +...+.+++|+|||++
T Consensus 220 ----------------------------------------~~~~~~v~v~D~~t~~~~~~~~--~~~~~~~va~spdg~~ 257 (301)
T d1l0qa2 220 ----------------------------------------DKYFNTVSMIDTGTNKITARIP--VGPDPAGIAVTPDGKK 257 (301)
T ss_dssp ----------------------------------------CSSCCEEEEEETTTTEEEEEEE--CCSSEEEEEECTTSSE
T ss_pred ----------------------------------------cceeeeeeeeecCCCeEEEEEc--CCCCEEEEEEeCCCCE
Confidence 0135789999999999888774 3457899999999998
Q ss_pred E-EEEeCCCcEEEEEecCCcCCcccC
Q psy15549 427 L-IASSTDGYCSIISFGDNEIGIPYV 451 (621)
Q Consensus 427 l-~s~s~dg~i~iw~~~~~~~~~~~~ 451 (621)
| ++++.|+.|++||+.+++++..+.
T Consensus 258 l~va~~~~~~i~v~D~~t~~~~~~~~ 283 (301)
T d1l0qa2 258 VYVALSFCNTVSVIDTATNTITATMA 283 (301)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCeEEEEECCCCeEEEEEe
Confidence 7 577789999999999998877764
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.91 E-value=1e-24 Score=220.17 Aligned_cols=350 Identities=10% Similarity=-0.029 Sum_probs=219.9
Q ss_pred cCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 91 PNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 91 pdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
++.-++++.+ ++.|.|||..++ +.+..+..| ..+..++|+|||++|++++.|+.|++||+.+++.....
T Consensus 30 ~~~~~~v~~~d~g~v~v~D~~t~-------~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~-- 99 (432)
T d1qksa2 30 LENLFSVTLRDAGQIALIDGSTY-------EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA-- 99 (432)
T ss_dssp GGGEEEEEETTTTEEEEEETTTC-------CEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE--
T ss_pred CCcEEEEEEcCCCEEEEEECCCC-------cEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEE--
Confidence 3334456666 778999999987 667777766 46999999999999999999999999999887642110
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEeccC-----------Ccce
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL-ISGSVDNTAIMWDVHKGKNLGILTEH-----------KKFV 237 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~-----------~~~v 237 (621)
.......|.+.+.+..|+|||++| ++++.++.|++||..+++.+..+..+ ....
T Consensus 100 --------------~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (432)
T d1qksa2 100 --------------EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRV 165 (432)
T ss_dssp --------------EEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCE
T ss_pred --------------EEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCce
Confidence 012223455667777889999986 67788999999999999988876543 3445
Q ss_pred EEEEEcCCCCEEE-EEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 238 QGVAWDPKNQYVA-TLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 238 ~~l~~sp~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
..+.++|+|.+++ +...++.|.+||..+.+....... .....+..++|+|||+++++
T Consensus 166 ~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i----------------------~~g~~~~~~~~spdg~~~~v 223 (432)
T d1qksa2 166 AAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI----------------------SAERFLHDGGLDGSHRYFIT 223 (432)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE----------------------ECCSSEEEEEECTTSCEEEE
T ss_pred eEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEE----------------------cccCccccceECCCCCEEEE
Confidence 6788999998765 455678999999887664432211 11223578999999999888
Q ss_pred ccccccCCCCCCcceeeeeeeeecccC---------CCceecCCcccceeeeec--cce--eeecCCCC--------CCC
Q psy15549 317 PSGCLENSDSTRKPISVTHVFTRACLN---------KPAVCLPSLQYYSVAVKC--CPV--LFELKPSD--------DKP 375 (621)
Q Consensus 317 ~s~~~~~~d~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~--------~~~ 375 (621)
++. ....+.+++........... .................. ... ........ ...
T Consensus 224 a~~----~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~ 299 (432)
T d1qksa2 224 AAN----ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDS 299 (432)
T ss_dssp EEG----GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred ecc----ccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEecccccccccccccEEEEE
Confidence 874 34445555443211111000 000000000000000000 000 00000000 012
Q ss_pred CccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCC
Q psy15549 376 LFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSG 455 (621)
Q Consensus 376 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~ 455 (621)
++.+++..+++++.++..++|+..... .|.....++++ ||++.|++++.|+.+++|++.++. .+..+..
T Consensus 300 ~~~~~g~~~~~~s~p~~~~lw~~~~~~-------~~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~---~l~~~~~ 368 (432)
T d1qksa2 300 FPALGGGSLFIKTHPNSQYLYVDATLN-------PEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWA---GITEGQP 368 (432)
T ss_dssp EECSCSCCCCEECCTTCSEEEEECTTC-------SSHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHH---TCCSSCC
T ss_pred EEcCCCCeEEEEecCCccceeecccCC-------CCCCeeeEEEE-EechhhcccccCCceEeccccccc---ccCCCCC
Confidence 234455667777777888888755432 24333445555 899999999999999999987653 2334555
Q ss_pred cccccCCCCCCCCcccC-----CCcccHHHhcccCcccc-ccccCCCCCCCc
Q psy15549 456 EESKENDPTKGEPVRSE-----DKPRSAEQAKGEGKVLG-EKQTGNKVSPTD 501 (621)
Q Consensus 456 ~~~~~~~~~~~~~~~s~-----~~~~~~~~w~~~~~~~~-~~~~~~~~s~~~ 501 (621)
.+..+.|++||+.+... ..++.|.+|+.....++ ...+...++|+|
T Consensus 369 ~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~i~~~~~~tp~G 420 (432)
T d1qksa2 369 RVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKDERLVTPTG 420 (432)
T ss_dssp EEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTTCCSEEE
T ss_pred cEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEEeEecCCCccCCCe
Confidence 67778999999866322 45678889985554443 233334455555
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.89 E-value=2.4e-22 Score=195.93 Aligned_cols=287 Identities=9% Similarity=0.070 Sum_probs=186.4
Q ss_pred CEEEEEc-CCceEEEEeccCccccccceecccccc--cCCCeEEEEECCCCCEEE-EEeCCCcEEEEEccCCCCCCCCCC
Q psy15549 94 ELLASGD-DVGKEIWYLTERESGIANVEFASDLSR--HQKAVNVVRFSPNGELLA-SGDDESTIIVWKQKTDQDLPEFPS 169 (621)
Q Consensus 94 ~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~--h~~~V~~i~~sp~g~~l~-s~s~dg~i~vwd~~~~~~~~~~~~ 169 (621)
.||++++ |+.|.|||+... +.+..+.. +...+.+++|+|||++++ +++.++.|.+||+.+++.+..+..
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~-------~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~ 74 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKM-------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred eEEEEEcCCCEEEEEECCCC-------eEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEec
Confidence 4677777 899999999987 55555543 445678999999999874 667899999999999876422210
Q ss_pred CCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe------------CCCeEEEEECCCCcEEEEeccCCcce
Q psy15549 170 SNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS------------VDNTAIMWDVHKGKNLGILTEHKKFV 237 (621)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~~~~~~v 237 (621)
.....+...+..++|+|++++++++. .+..+.+||..+++....+.. ...+
T Consensus 75 ----------------~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 137 (337)
T d1pbyb_ 75 ----------------STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQI 137 (337)
T ss_dssp ----------------CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSC
T ss_pred ----------------CCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc-cCCc
Confidence 00011223345789999999998775 357899999999998888764 4567
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
.+++|+|+|+++++++.+ +.+||..+++....+....... ...+++++..+...
T Consensus 138 ~~~~~s~dg~~l~~~~~~--~~~~d~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~ 191 (337)
T d1pbyb_ 138 TMLAWARDGSKLYGLGRD--LHVMDPEAGTLVEDKPIQSWEA------------------------ETYAQPDVLAVWNQ 191 (337)
T ss_dssp CCEEECTTSSCEEEESSS--EEEEETTTTEEEEEECSTTTTT------------------------TTBCCCBCCCCCCC
T ss_pred eEEEEcCCCCEEEEEcCC--cceeeeecCcEEEEeecCCccc------------------------cceecCCcceeecc
Confidence 889999999999988654 7889999998877765433221 11222222211111
Q ss_pred ccc----------ccC---------CCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCcc
Q psy15549 318 SGC----------LEN---------SDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFK 378 (621)
Q Consensus 318 s~~----------~~~---------~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (621)
... ... .+..+.+|+.... .........+........+.|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------------- 250 (337)
T d1pbyb_ 192 HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG------EMAMREVRIMDVFYFSTAVNP--------------- 250 (337)
T ss_dssp CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC------CEEEEEEEECSSCEEEEEECT---------------
T ss_pred ccccceeeeeeeeeeeccceeeecccCccEEEEEcCCC------cEEEEEecCCCcceEEEEecc---------------
Confidence 100 000 1111111111100 000000111111222222222
Q ss_pred CCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCc
Q psy15549 379 LPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGE 456 (621)
Q Consensus 379 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~ 456 (621)
++..++.. ++.|++||+.+++.+..+. +...+.+++|+|||++|++++.||.|++||..+++.+..+..+...
T Consensus 251 -~~~~~~~~--~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~~g~~ 323 (337)
T d1pbyb_ 251 -AKTRAFGA--YNVLESFDLEKNASIKRVP--LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNA 323 (337)
T ss_dssp -TSSEEEEE--ESEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGGGC
T ss_pred -cceEEEEc--cccEEEEECCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEECCCCC
Confidence 34444433 5899999999999998885 5567899999999999999999999999999999888777654433
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.89 E-value=2.2e-22 Score=197.01 Aligned_cols=319 Identities=10% Similarity=0.035 Sum_probs=196.3
Q ss_pred EeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccc-cccCcEEEEEEccCCCEEE
Q psy15549 19 VDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLS-RHQKAVNVVRFSPNGELLA 97 (621)
Q Consensus 19 l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~l~~spdg~~la 97 (621)
++|+++++ +|++++.++.|. +||+.+++... ++. .|...+.+++|+|||++++
T Consensus 2 ~a~~~~~~-----~l~~~~~~~~v~--------------v~D~~t~~~~~-------t~~~~~~~~p~~l~~spDG~~l~ 55 (346)
T d1jmxb_ 2 PALKAGHE-----YMIVTNYPNNLH--------------VVDVASDTVYK-------SCVMPDKFGPGTAMMAPDNRTAY 55 (346)
T ss_dssp CCCCTTCE-----EEEEEETTTEEE--------------EEETTTTEEEE-------EEECSSCCSSCEEEECTTSSEEE
T ss_pred ccCCCCCc-----EEEEEcCCCEEE--------------EEECCCCCEEE-------EEEcCCCCCcceEEECCCCCEEE
Confidence 58999998 999999999999 88888765432 243 4556788999999999875
Q ss_pred EE-c-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe------------CCCcEEEEEccCCCC
Q psy15549 98 SG-D-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD------------DESTIIVWKQKTDQD 163 (621)
Q Consensus 98 s~-~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s------------~dg~i~vwd~~~~~~ 163 (621)
++ . ++.|.+||+..+.... ..........+...+..++|+|||+++++++ .++.+.+|+..+++.
T Consensus 56 v~~~~~~~v~~~d~~t~~~~~-~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 134 (346)
T d1jmxb_ 56 VLNNHYGDIYGIDLDTCKNTF-HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 134 (346)
T ss_dssp EEETTTTEEEEEETTTTEEEE-EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred EEECCCCcEEEEeCccCeeee-eecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEeccccee
Confidence 54 4 7789999998763110 0001111112233466899999999888765 467889999888765
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEc
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD 243 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~s 243 (621)
...+ .. ......+..+.+++++.+++++ +.+.+|++.+++.+..+..+. ....+.++
T Consensus 135 ~~~~------------------~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 191 (346)
T d1jmxb_ 135 AKPV------------------RT-FPMPRQVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVALPLRN-WNRKGYSA 191 (346)
T ss_dssp BCCS------------------EE-EECCSSCCCEEECTTSCEEEES---SSEEEECTTTCCEEEEECSTT-CCCTTBCC
T ss_pred eeEE------------------Ee-eeccCceEEEEecCCCEEEEeC---CcceEEEccCCCEEEEEecCC-CccceEEe
Confidence 4332 11 1223445667778888766543 568999999999988876543 34566778
Q ss_pred CCCCEEEEE-eCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecccccc
Q psy15549 244 PKNQYVATL-SSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLE 322 (621)
Q Consensus 244 p~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~ 322 (621)
|++..++.. ..++.+.+++.............. ......+..+... .+.....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~-~~~~~~~------ 245 (346)
T d1jmxb_ 192 PDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT-------------------ADLLYGYLSVDLK-TGKTHTQ------ 245 (346)
T ss_dssp CBCCCCCCCCCTTCEEEEEEEEEEC-------CC-------------------CEEEEEEEEEETT-TCCEEEE------
T ss_pred ccccEEEEEecCCCceEeeeeeeeeccCceeEee-------------------ccCCceEEEEECC-CCceEEE------
Confidence 887765433 334555555432211000000000 0000000000000 0000000
Q ss_pred CCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCc
Q psy15549 323 NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHAS 402 (621)
Q Consensus 323 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 402 (621)
....+...+....+.+ ++..++.. .++.|.+||..+++
T Consensus 246 -------------------------~~~~~~~~~~~~~~~~----------------~~~~~~~~-~~~~v~v~d~~~~~ 283 (346)
T d1jmxb_ 246 -------------------------EFADLTELYFTGLRSP----------------KDPNQIYG-VLNRLAKYDLKQRK 283 (346)
T ss_dssp -------------------------EEEECSSCEEEEEECS----------------SCTTEEEE-EESEEEEEETTTTE
T ss_pred -------------------------EeecccceeEEEEEeC----------------CCCEEEEe-cCCeEEEEECCCCc
Confidence 0000111111111111 33444433 34679999999999
Q ss_pred eeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcc
Q psy15549 403 PFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEE 457 (621)
Q Consensus 403 ~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~ 457 (621)
.+..+.. ...+.+++|||||++|++++.||.|++||..+++.+..+..+.+..
T Consensus 284 ~~~~~~~--~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~g~~ 336 (346)
T d1jmxb_ 284 LIKAANL--DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDM 336 (346)
T ss_dssp EEEEEEC--SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSSSCC
T ss_pred EEEEEcC--CCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEECCCCCc
Confidence 8888753 4579999999999999999999999999999999998888766553
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.87 E-value=9.6e-20 Score=180.33 Aligned_cols=318 Identities=9% Similarity=-0.063 Sum_probs=211.4
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEe---cCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTG---GADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNV 86 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg---~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 86 (621)
..+..++.+++++||++ ++++. ..++...+| +||..+++... ++..+.. ..
T Consensus 17 ~~~~~p~~~~a~spdg~-----~~~~~~~~~~~~~~~v~------------v~D~~tg~~~~-------~~~~~~~--~~ 70 (373)
T d2madh_ 17 GAADGPTNDEAPGADGR-----RSYINLPAHHSAIIQQW------------VLDAGSGSILG-------HVNGGFL--PN 70 (373)
T ss_pred ccCCCCccccccCCCCC-----EEEEEcccccCCCceEE------------EEECCCCCEEE-------EEeCCCC--cc
Confidence 34778999999999998 76654 223333333 88877665432 2444433 36
Q ss_pred EEEccCCCEEEEEc-----------CCceEEEEeccCccccccceecccccccCCCe-------EEEEECCCCCEEEEEe
Q psy15549 87 VRFSPNGELLASGD-----------DVGKEIWYLTERESGIANVEFASDLSRHQKAV-------NVVRFSPNGELLASGD 148 (621)
Q Consensus 87 l~~spdg~~las~~-----------d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V-------~~i~~sp~g~~l~s~s 148 (621)
++|+|||++|+++. ++.|.+||...+ +....+..+.... ..+.|+++++.++...
T Consensus 71 ~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~-------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~ 143 (373)
T d2madh_ 71 PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF-------LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQ 143 (373)
T ss_pred EEEcCCCCEEEEEeecCCcccccccceEEEEEECCCC-------cEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEE
Confidence 89999999999864 356899999877 3344443333322 4578888888665543
Q ss_pred --CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCc
Q psy15549 149 --DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL-ISGSVDNTAIMWDVHKGK 225 (621)
Q Consensus 149 --~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l-~s~~~dg~i~vwd~~~~~ 225 (621)
.++.+.+|+....+.. .+.....++.++|+++.+ ++.+.|+.+.+|+...+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~ 198 (373)
T d2madh_ 144 FAAGPAVGLVVQGGSSDD-------------------------QLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGA 198 (373)
T ss_pred EcCCCceEEeeccCCeEE-------------------------EEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCce
Confidence 4567888887766532 334456789999998755 678889999999998887
Q ss_pred EEEEeccC------CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcc
Q psy15549 226 NLGILTEH------KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMK 299 (621)
Q Consensus 226 ~~~~~~~~------~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (621)
.......+ ......+.+++++.+ +..+.++.+.+|+................. . ........
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~ 266 (373)
T d2madh_ 199 AGAGLVGAMLTAAQNLLTQPAQANKSGRI-VWPVYSGKILQADISAAGATNKAPIDALSG-G----------RKADTWRP 266 (373)
T ss_pred eeEEEeeeccccCccceeeeEEECCCceE-EEecCCceEEEEEcCCCeEEEEEeeccccC-c----------EEeeeecc
Confidence 76655322 222345566666554 456678999999988765433221100000 0 00000011
Q ss_pred cceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccC
Q psy15549 300 SFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKL 379 (621)
Q Consensus 300 ~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (621)
.....+++++++..++... .
T Consensus 267 ~~~~~~~~~~d~~~~~~~~------------------------------------------------------------~ 286 (373)
T d2madh_ 267 GGWQQVAYLKSSDGIYLLT------------------------------------------------------------S 286 (373)
T ss_pred CcceeeEEecCCCeEEEec------------------------------------------------------------C
Confidence 1224456666666655433 1
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCe--EEEEeCCCcEEEEEecCCcCCcccCCCCCcc
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKV--LIASSTDGYCSIISFGDNEIGIPYVPPSGEE 457 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~--l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~ 457 (621)
++..++....++.+.+||..+++.+..+. +...+.+++|+|||+. +++++.|+.|++||+.+++.+..+..+....
T Consensus 287 ~~~~~~~~~~~~~v~~~d~~t~~~~~~~~--~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P 364 (373)
T d2madh_ 287 EQSAWKLHAAAKEVTSVTGLVGQTSSQIS--LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGP 364 (373)
T ss_pred CCceEEeecCCCeEEEEECCCCcEEEEec--CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCC
Confidence 33556777788999999999999998874 5667999999999984 4678899999999999999999887665444
Q ss_pred cc
Q psy15549 458 SK 459 (621)
Q Consensus 458 ~~ 459 (621)
..
T Consensus 365 ~~ 366 (373)
T d2madh_ 365 QV 366 (373)
T ss_pred cE
Confidence 33
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.84 E-value=2.5e-21 Score=189.36 Aligned_cols=311 Identities=7% Similarity=-0.065 Sum_probs=217.3
Q ss_pred EEEccCCCEEEEEc-CCceEEEEeccCccccccceeccccc-ccCCCeEEEEECCCCCEEE-EEeCCCcEEEEEccCCCC
Q psy15549 87 VRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLS-RHQKAVNVVRFSPNGELLA-SGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 87 l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~i~~sp~g~~l~-s~s~dg~i~vwd~~~~~~ 163 (621)
++|++++++|++++ ++.|.+||+.++ +.+..+. .|...+.+++|+|||++++ ++..++.|.+||+.+++.
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~-------~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~ 74 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASD-------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 74 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTT-------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCC-------CEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCee
Confidence 47899999999988 889999999987 5566554 3556788999999999875 556789999999998875
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe------------CCCeEEEEECCCCcEEEEec
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS------------VDNTAIMWDVHKGKNLGILT 231 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~ 231 (621)
+..+... .....+...+..++|+|||+++++++ .++.+.+|+..+++....+.
T Consensus 75 ~~~~~~~---------------~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 139 (346)
T d1jmxb_ 75 TFHANLS---------------SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR 139 (346)
T ss_dssp EEEEESC---------------CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE
T ss_pred eeeeccc---------------ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEE
Confidence 4322100 00011122356789999999988765 46788999988876554443
Q ss_pred cC--CcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecC
Q psy15549 232 EH--KKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309 (621)
Q Consensus 232 ~~--~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 309 (621)
.+ ...+..+.+++++..+++ ++.+.+|++.+++.+..+..+. ....+.++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~ 192 (346)
T d1jmxb_ 140 TFPMPRQVYLMRAADDGSLYVA---GPDIYKMDVKTGKYTVALPLRN------------------------WNRKGYSAP 192 (346)
T ss_dssp EEECCSSCCCEEECTTSCEEEE---SSSEEEECTTTCCEEEEECSTT------------------------CCCTTBCCC
T ss_pred eeeccCceEEEEecCCCEEEEe---CCcceEEEccCCCEEEEEecCC------------------------CccceEEec
Confidence 22 234556777777776653 3568999999988877664221 235678888
Q ss_pred CCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEc
Q psy15549 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVAT 389 (621)
Q Consensus 310 dg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (621)
++..++.... ..+.+.++...... . .....+.++..
T Consensus 193 ~~~~~~~~~~----~~~~~~~~~~~~~~------------------------~----------------~~~~~~~~~~~ 228 (346)
T d1jmxb_ 193 DVLYFWPHQS----PRHEFSMLYTIARF------------------------K----------------DDKQDPATADL 228 (346)
T ss_dssp BCCCCCCCCC----TTCEEEEEEEEEEC-----------------------------------------------CCCEE
T ss_pred cccEEEEEec----CCCceEeeeeeeee------------------------c----------------cCceeEeeccC
Confidence 8887766542 22222222221100 0 01122334445
Q ss_pred CCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCCCCCCCCc
Q psy15549 390 ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPV 469 (621)
Q Consensus 390 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (621)
+..+.+||..++.........|...+..+.+++++.+++.+.. +.|.+||..++++...+.. ...+..+.+++||+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~-~~~~~~va~s~DG~~l 306 (346)
T d1jmxb_ 229 LYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKL 306 (346)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCE
T ss_pred CceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEcC-CCCEEEEEEcCCCCEE
Confidence 6789999999998777766678889999999999998887764 5799999999988777654 3457789999999999
Q ss_pred ccCCCcccHHHhccc-Cccccccc
Q psy15549 470 RSEDKPRSAEQAKGE-GKVLGEKQ 492 (621)
Q Consensus 470 ~s~~~~~~~~~w~~~-~~~~~~~~ 492 (621)
+.++.++.|.+|+.+ .+.+.+.+
T Consensus 307 ~v~~~d~~v~v~D~~t~~~i~~i~ 330 (346)
T d1jmxb_ 307 YLGGTFNDLAVFNPDTLEKVKNIK 330 (346)
T ss_dssp EEESBSSEEEEEETTTTEEEEEEE
T ss_pred EEEeCCCcEEEEECccCCEEEEEE
Confidence 999999999999965 34444433
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=6.8e-19 Score=170.97 Aligned_cols=292 Identities=12% Similarity=0.157 Sum_probs=187.0
Q ss_pred eEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc--CCceEEEE
Q psy15549 31 YRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD--DVGKEIWY 108 (621)
Q Consensus 31 ~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~--d~~v~iw~ 108 (621)
..+++++.|+.|+ +|++....... ... ...|.+.|.+|+|||||++|++++ ++.|++|+
T Consensus 5 ~v~v~~~~~~~I~--------------v~~~~~~~~l~----~~~-~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~ 65 (333)
T d1ri6a_ 5 TVYIASPESQQIH--------------VWNLNHEGALT----LTQ-VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65 (333)
T ss_dssp EEEEEEGGGTEEE--------------EEEECTTSCEE----EEE-EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCcEE--------------EEEEcCCCCeE----EEE-EEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 3668888999999 88887543221 111 245778999999999999996654 78899999
Q ss_pred eccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeee
Q psy15549 109 LTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187 (621)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (621)
+....... . ......+...+..++|+|||++|++++. ++.|.+|+....... ....
T Consensus 66 i~~~~~~~---~-~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~-------------------~~~~ 122 (333)
T d1ri6a_ 66 IAPDDGAL---T-FAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPV-------------------GVVD 122 (333)
T ss_dssp ECTTTCCE---E-EEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEE-------------------EEEE
T ss_pred EeCCCCcE---E-EeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccce-------------------eccc
Confidence 98653211 1 1112234456778999999999998875 678999988766432 1133
Q ss_pred ecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEEEE------eccCCcceEEEEEcCCCCEEEEEe-CCCcEE
Q psy15549 188 LRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNLGI------LTEHKKFVQGVAWDPKNQYVATLS-SDRSLR 259 (621)
Q Consensus 188 ~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~~~------~~~~~~~v~~l~~sp~~~~l~s~~-~dg~i~ 259 (621)
...+...+.++.++|+++++++++. +..|.+|+......... ..........++|++++.+++... ..+...
T Consensus 123 ~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~ 202 (333)
T d1ri6a_ 123 VVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVD 202 (333)
T ss_dssp EECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred ccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceE
Confidence 3456677889999999998888775 46799999876543221 122345568899999999877655 456778
Q ss_pred EEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeee
Q psy15549 260 TYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTR 339 (621)
Q Consensus 260 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~ 339 (621)
+|+.............. ...............+++++|++++++..
T Consensus 203 v~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~s~d~~~~~~~~--------------------- 248 (333)
T d1ri6a_ 203 VWELKDPHGNIECVQTL-------------DMMPENFSDTRWAADIHITPDGRHLYACD--------------------- 248 (333)
T ss_dssp EEESSCTTSCCEEEEEE-------------ECSCTTCCSCCCEEEEEECTTSSEEEEEE---------------------
T ss_pred EEeecccccceeeeeee-------------eeeecCCCccccceeEEEecccCceeeec---------------------
Confidence 88764422111000000 00000011122334566677766655433
Q ss_pred cccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEec--ccccceEE
Q psy15549 340 ACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIAN--IHYTKLTD 417 (621)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~h~~~v~~ 417 (621)
..++.+.+|++........+.. .+...+.+
T Consensus 249 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 280 (333)
T d1ri6a_ 249 ------------------------------------------------RTASLITVFSVSEDGSVLSKEGFQPTETQPRG 280 (333)
T ss_dssp ------------------------------------------------TTTTEEEEEEECTTSCCEEEEEEEECSSSCCC
T ss_pred ------------------------------------------------ccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeE
Confidence 2356777777665543332211 23456789
Q ss_pred EEEcCCCCeEEEEe-CCCcEEEEEec--CCcC
Q psy15549 418 ITWSSDGKVLIASS-TDGYCSIISFG--DNEI 446 (621)
Q Consensus 418 ~~~spdg~~l~s~s-~dg~i~iw~~~--~~~~ 446 (621)
++|+|||++|++++ .++.|++|+++ +|.+
T Consensus 281 ~a~spDGk~l~va~~~~~~v~v~~id~~tG~l 312 (333)
T d1ri6a_ 281 FNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 312 (333)
T ss_dssp EEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence 99999999987775 56899999765 4544
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.83 E-value=3.2e-18 Score=163.42 Aligned_cols=223 Identities=14% Similarity=0.155 Sum_probs=165.0
Q ss_pred CCCeEEEeccccccCCcceEE-EEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 13 RDPVLSVDIQLKQEKDNCYRI-VTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 13 ~~~v~~l~~spd~~~~~~~~l-~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
......++|+|||+ +| ++++.++.|+ +||+.+++... .+..|. .+..++|++
T Consensus 31 g~~p~~va~spdG~-----~l~v~~~~~~~i~--------------v~d~~t~~~~~-------~~~~~~-~~~~~~~~~ 83 (301)
T d1l0qa2 31 GSNPMGAVISPDGT-----KVYVANAHSNDVS--------------IIDTATNNVIA-------TVPAGS-SPQGVAVSP 83 (301)
T ss_dssp SSSEEEEEECTTSS-----EEEEEEGGGTEEE--------------EEETTTTEEEE-------EEECSS-SEEEEEECT
T ss_pred CCCceEEEEeCCCC-----EEEEEECCCCEEE--------------EEECCCCceee-------eeeccc-ccccccccc
Confidence 34678999999998 66 5777899999 88887665432 244444 468899999
Q ss_pred CCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEE-EEeCCCcEEEEEccCCCCCCCCC
Q psy15549 92 NGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLA-SGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 92 dg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~-s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
++..+++++ +..+.+|+...+ .....+. +...+.+++|+|++..++ ++..++.+.+|+..+....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~---- 151 (301)
T d1l0qa2 84 DGKQVYVTNMASSTLSVIDTTSN-------TVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI---- 151 (301)
T ss_dssp TSSEEEEEETTTTEEEEEETTTT-------EEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE----
T ss_pred ccccccccccccceeeecccccc-------eeeeecc-ccccceEEEeecCCCeeeeeeccccceeeeecccccee----
Confidence 999777654 566889988776 4444443 345678899999998775 4556788999999887643
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-CeEEEEECCCCcEEEEeccCCcceEEEEEcCCCC
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD-NTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d-g~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~ 247 (621)
..+ .+...+.++.++|++..+++++.+ +.+.+|+.........+.. ...+..++|++++.
T Consensus 152 -----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~ 212 (301)
T d1l0qa2 152 -----------------NTV-SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGT 212 (301)
T ss_dssp -----------------EEE-ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSS
T ss_pred -----------------eec-ccCCCceEEEeeccccceeeecccccccccccccceeeeecccc-cCCcceeecccccc
Confidence 222 344568899999999988887765 6777888777766666543 45577899999999
Q ss_pred EEEEEeC---CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 248 YVATLSS---DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 248 ~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
.+++++. ++.|++||+.+++.+..+... ..+.+++|+|||++|+++
T Consensus 213 ~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~------------------------~~~~~va~spdg~~l~va 261 (301)
T d1l0qa2 213 KAYVTNVDKYFNTVSMIDTGTNKITARIPVG------------------------PDPAGIAVTPDGKKVYVA 261 (301)
T ss_dssp EEEEEEECSSCCEEEEEETTTTEEEEEEECC------------------------SSEEEEEECTTSSEEEEE
T ss_pred ccccccccceeeeeeeeecCCCeEEEEEcCC------------------------CCEEEEEEeCCCCEEEEE
Confidence 8876654 467999999999887766321 235789999999987543
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.81 E-value=4.3e-20 Score=179.70 Aligned_cols=289 Identities=10% Similarity=0.009 Sum_probs=192.7
Q ss_pred CEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEE
Q psy15549 142 ELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI-SGSVDNTAIMWD 220 (621)
Q Consensus 142 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~-s~~~dg~i~vwd 220 (621)
.||++++.|++|.|||+.+.+.+..+ ....+...+.+++|+|||++|+ +++.++.|.+||
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i-------------------~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D 62 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVI-------------------TIADAGPTPMVPMVAPGGRIAYATVNKSESLVKID 62 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEE-------------------ECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEE-------------------ECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEE
Confidence 48999999999999999988754211 1223455678999999999874 667799999999
Q ss_pred CCCCcEEEEeccCCc-----ceEEEEEcCCCCEEEEEeC------------CCcEEEEEccCceeeeecccCCCCCCCcc
Q psy15549 221 VHKGKNLGILTEHKK-----FVQGVAWDPKNQYVATLSS------------DRSLRTYSIQSKKVISRACRSKLPVDSSH 283 (621)
Q Consensus 221 ~~~~~~~~~~~~~~~-----~v~~l~~sp~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 283 (621)
+.+++.+..+..+.. .+..++|+|++++++++.. ++.+.+||..+++....+...
T Consensus 63 ~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------- 134 (337)
T d1pbyb_ 63 LVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP-------- 134 (337)
T ss_dssp TTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--------
T ss_pred CCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEecccc--------
Confidence 999999888765432 3457899999999987763 577889999998877766422
Q ss_pred ccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccc
Q psy15549 284 ELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCP 363 (621)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (621)
..+..++|+|||++++++++ + ..+|+............ +. ......+.|
T Consensus 135 ----------------~~~~~~~~s~dg~~l~~~~~-----~--~~~~d~~~~~~~~~~~~-------~~-~~~~~~~~~ 183 (337)
T d1pbyb_ 135 ----------------RQITMLAWARDGSKLYGLGR-----D--LHVMDPEAGTLVEDKPI-------QS-WEAETYAQP 183 (337)
T ss_dssp ----------------SSCCCEEECTTSSCEEEESS-----S--EEEEETTTTEEEEEECS-------TT-TTTTTBCCC
T ss_pred ----------------CCceEEEEcCCCCEEEEEcC-----C--cceeeeecCcEEEEeec-------CC-ccccceecC
Confidence 23468999999999998762 2 34454322111110000 00 000000000
Q ss_pred eeeecCCCCCCC--------CccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCc
Q psy15549 364 VLFELKPSDDKP--------LFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGY 435 (621)
Q Consensus 364 ~~~~~~~~~~~~--------~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~ 435 (621)
............ ..............++.+.+|+..++.........+...+..++++|++.+++.+ ++.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 261 (337)
T d1pbyb_ 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV 261 (337)
T ss_dssp BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE
T ss_pred CcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--ccc
Confidence 000000000000 0000001111112345799999999987666555677889999999999988776 588
Q ss_pred EEEEEecCCcCCcccCCCCCcccccCCCCCCCCcccCCCcccHHHhcccC-cccccc
Q psy15549 436 CSIISFGDNEIGIPYVPPSGEESKENDPTKGEPVRSEDKPRSAEQAKGEG-KVLGEK 491 (621)
Q Consensus 436 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~w~~~~-~~~~~~ 491 (621)
|++||+.++++...+.. ......+.++++|+.++.++.++.+.+|+.+. +.+.++
T Consensus 262 i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i 317 (337)
T d1pbyb_ 262 LESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp EEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEEcC-CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 99999999998887754 44567889999999999999999999999653 444333
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.80 E-value=2.7e-18 Score=168.41 Aligned_cols=322 Identities=9% Similarity=-0.043 Sum_probs=196.7
Q ss_pred CCeEEEeccccccCCcceEEEEe-----cCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTG-----GADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg-----~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
+|+.-.+.+||++ ++++. ..+..|. +||..+++... ++..+ .+..++
T Consensus 2 ~p~~~~a~spdg~-----~~~v~~~~~~~~~~~v~--------------v~D~~tg~~~~-------~~~~g--~~~~~a 53 (355)
T d2bbkh_ 2 EPRILEAPAPDAR-----RVYVNDPAHFAAVTQQF--------------VIDGEAGRVIG-------MIDGG--FLPNPV 53 (355)
T ss_dssp CCCBCCCCCCCTT-----EEEEEECGGGCSSEEEE--------------EEETTTTEEEE-------EEEEC--SSCEEE
T ss_pred CCcEeEeeCCCCC-----EEEEEecccCCCcCeEE--------------EEECCCCcEEE-------EEECC--CCCceE
Confidence 4666678899998 66654 3355676 88887765422 24433 334799
Q ss_pred EccCCCEEEEEc-----------CCceEEEEeccCccccccceecccccc-------cCCCeEEEEECCCCCEEEEEe--
Q psy15549 89 FSPNGELLASGD-----------DVGKEIWYLTERESGIANVEFASDLSR-------HQKAVNVVRFSPNGELLASGD-- 148 (621)
Q Consensus 89 ~spdg~~las~~-----------d~~v~iw~~~~~~~~~~~~~~~~~~~~-------h~~~V~~i~~sp~g~~l~s~s-- 148 (621)
|||||++|++++ ++.|.+||...+. ....+.. .......++|+|++++++.++
T Consensus 54 ~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~-------~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~ 126 (355)
T d2bbkh_ 54 VADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL-------PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS 126 (355)
T ss_dssp ECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC-------EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS
T ss_pred EcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCC-------EEEEEecCCcceeecCCCCceEEEecCCCeeEEecCC
Confidence 999999887643 5679999998763 2222211 122345689999999887764
Q ss_pred CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEE
Q psy15549 149 DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNL 227 (621)
Q Consensus 149 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~ 227 (621)
.+..+.+|+..+++.+..+.... ............+.+++|++.++.... ++.+.+++......
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~- 191 (355)
T d2bbkh_ 127 PAPAVGVVDLEGKAFKRMLDVPD--------------CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP- 191 (355)
T ss_dssp SSCEEEEEETTTTEEEEEEECCS--------------EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSC-
T ss_pred CCceeeeeecCCCcEeeEEecCC--------------cceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccc-
Confidence 56789999998886542221000 000000122334566777766655433 34555555443321
Q ss_pred EEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeee
Q psy15549 228 GILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307 (621)
Q Consensus 228 ~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 307 (621)
.+...+....+.+++..++.++.++.+.+|++..+......... .. ................+++
T Consensus 192 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~p~~~~~~~~ 256 (355)
T d2bbkh_ 192 ----EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVE-AL----------TEAERADGWRPGGWQQVAY 256 (355)
T ss_dssp ----TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEE-SS----------CHHHHHTTEEECSSSCEEE
T ss_pred ----eecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccC-Cc----------ccceEeeeeeccceEEEEE
Confidence 23444556778888899999999999999999876542211000 00 0000000011112245777
Q ss_pred cCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEE
Q psy15549 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387 (621)
Q Consensus 308 spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (621)
++++..++.... ++..... .
T Consensus 257 ~~d~~~~~~~~~-----~~~~~~~-------------------------------------------------------~ 276 (355)
T d2bbkh_ 257 HRALDRIYLLVD-----QRDEWRH-------------------------------------------------------K 276 (355)
T ss_dssp ETTTTEEEEEEE-----ECCTTCT-------------------------------------------------------T
T ss_pred eCCCCeEEEEec-----cCCceee-------------------------------------------------------c
Confidence 888777766541 1110000 0
Q ss_pred EcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC--eEEEEeCCCcEEEEEecCCcCCcccCCCCCcccccCC
Q psy15549 388 ATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK--VLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKEND 462 (621)
Q Consensus 388 ~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~--~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 462 (621)
...+.|.+||..+++.+..+. +...+.+++|+|||+ ++++++.|+.|++||+.++++++.+..+......+.+
T Consensus 277 ~~~~~v~v~d~~t~~~~~~~~--~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~ 351 (355)
T d2bbkh_ 277 TASRFVVVLDAKTGERLAKFE--MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITT 351 (355)
T ss_dssp SCEEEEEEEETTTCCEEEEEE--EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEC
T ss_pred CCCCeEEEEeCCCCcEEEEec--CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEEe
Confidence 123578999999999888875 445689999999998 3456778999999999999998888766544444433
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=2e-15 Score=145.98 Aligned_cols=246 Identities=11% Similarity=0.151 Sum_probs=161.9
Q ss_pred ecCCCCeEEEeccccccCCcceEE-EEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRI-VTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l-~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 88 (621)
..|.+.+.+|+|||||+ +| +++..|+.|+ +|++........ .. ....+...+..++
T Consensus 33 ~~~~~~v~~la~spDG~-----~L~v~~~~d~~i~--------------~~~i~~~~~~~~---~~-~~~~~~~~p~~l~ 89 (333)
T d1ri6a_ 33 VDVPGQVQPMVVSPDKR-----YLYVGVRPEFRVL--------------AYRIAPDDGALT---FA-AESALPGSLTHIS 89 (333)
T ss_dssp EECSSCCCCEEECTTSS-----EEEEEETTTTEEE--------------EEEECTTTCCEE---EE-EEEECSSCCSEEE
T ss_pred EcCCCCEeEEEEeCCCC-----EEEEEECCCCeEE--------------EEEEeCCCCcEE---Ee-eecccCCCceEEE
Confidence 45778999999999998 77 5556689999 888876543222 11 1123445677899
Q ss_pred EccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC-CCcEEEEEccCCCCCC
Q psy15549 89 FSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD-ESTIIVWKQKTDQDLP 165 (621)
Q Consensus 89 ~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~-dg~i~vwd~~~~~~~~ 165 (621)
|+|||++|++++ ++.+.+|+...... ........+...+.++.|+|+++++++++. +..|.+|+........
T Consensus 90 ~spDg~~l~v~~~~~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~ 164 (333)
T d1ri6a_ 90 TDHQGQFVFVGSYNAGNVSVTRLEDGLP-----VGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 164 (333)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTEE-----EEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred EcCCCCEEeecccCCCceeeeccccccc-----eecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcce
Confidence 999999999886 55688888776521 223334456677889999999998887764 4579999987665321
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCc----EEEEec------cCC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGK----NLGILT------EHK 234 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~~~----~~~~~~------~~~ 234 (621)
.. ...............++|++++..++... ..+...+|++.... ....+. ...
T Consensus 165 ~~---------------~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (333)
T d1ri6a_ 165 AQ---------------DPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT 229 (333)
T ss_dssp EE---------------EEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC
T ss_pred ee---------------eceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCcc
Confidence 10 00112234456678999999998877655 45678888865432 111221 123
Q ss_pred cceEEEEEcCCCCEEEEEe-CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCe
Q psy15549 235 KFVQGVAWDPKNQYVATLS-SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQL 313 (621)
Q Consensus 235 ~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~ 313 (621)
.....+++++++++++... .++.+.+|++............ ......+.+++|+|||++
T Consensus 230 ~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~p~~~a~spDGk~ 289 (333)
T d1ri6a_ 230 RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGF--------------------QPTETQPRGFNVDHSGKY 289 (333)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEE--------------------EECSSSCCCEEECTTSSE
T ss_pred ccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEE--------------------eCCCCCeeEEEEeCCCCE
Confidence 4566789999999876554 5678999998765433222110 011223467999999998
Q ss_pred EEecc
Q psy15549 314 LIAPS 318 (621)
Q Consensus 314 l~~~s 318 (621)
|++++
T Consensus 290 l~va~ 294 (333)
T d1ri6a_ 290 LIAAG 294 (333)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 87765
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.71 E-value=1.9e-15 Score=148.86 Aligned_cols=304 Identities=7% Similarity=-0.066 Sum_probs=188.4
Q ss_pred cccccCcEEEEEEccCCCEEEEEc------CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe--
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGD------DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-- 148 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~------d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-- 148 (621)
...+.+++.+++++|||+.++... ...+.+||...+ +.+..+..+... .++|+|||++|++++
T Consensus 16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg-------~~~~~~~~~~~~--~~a~SpDG~~l~va~~~ 86 (373)
T d2madh_ 16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSG-------SILGHVNGGFLP--NPVAAHSGSEFALASTS 86 (373)
T ss_pred cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCC-------CEEEEEeCCCCc--cEEEcCCCCEEEEEeec
Confidence 356788999999999999987653 345788887766 555556555443 799999999998875
Q ss_pred --------CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCC-------CeEEEEECCCCCEEEEEe--
Q psy15549 149 --------DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLE-------DVYDISWSPTSTHLISGS-- 211 (621)
Q Consensus 149 --------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~v~~i~~spd~~~l~s~~-- 211 (621)
.++.|.+||..+++.+..+ ..+.. ....+.|+++++.++...
T Consensus 87 ~~~~~~~~~~~~v~v~D~~t~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~ 145 (373)
T d2madh_ 87 FSRIAKGKRTDYVEVFDPVTFLPIADI---------------------ELPDAPRFDVGPYSWMNANTPNNADLLFFQFA 145 (373)
T ss_pred CCcccccccceEEEEEECCCCcEEEEE---------------------ecCCcceeEeccCCCcEEEEeCCCcEEEEEEc
Confidence 4578999999998865332 22221 224578999998776654
Q ss_pred CCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEE-EEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccc
Q psy15549 212 VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYV-ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVV 290 (621)
Q Consensus 212 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (621)
.++.+.+|+....+..... ....++.++|+++.+ ++.+.|+.+.+|+...+.............
T Consensus 146 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~----------- 210 (373)
T d2madh_ 146 AGPAVGLVVQGGSSDDQLL----SSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTA----------- 210 (373)
T ss_pred CCCceEEeeccCCeEEEEe----ccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeecccc-----------
Confidence 3578899998877655444 335678899998764 578889999999998887765543221111
Q ss_pred cccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCC
Q psy15549 291 PLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKP 370 (621)
Q Consensus 291 ~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (621)
........+.+++++.+++... ++.+.+|+......
T Consensus 211 ------~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~-------------------------------- 246 (373)
T d2madh_ 211 ------AQNLLTQPAQANKSGRIVWPVY------SGKILQADISAAGA-------------------------------- 246 (373)
T ss_pred ------CccceeeeEEECCCceEEEecC------CceEEEEEcCCCeE--------------------------------
Confidence 1111223445555555444322 33333333221000
Q ss_pred CCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCC----------CeEEEEeCCCcEEEEE
Q psy15549 371 SDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDG----------KVLIASSTDGYCSIIS 440 (621)
Q Consensus 371 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg----------~~l~s~s~dg~i~iw~ 440 (621)
..+..|+.......... ........+++++++ ..+++...++.|.+||
T Consensus 247 --------------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d 304 (373)
T d2madh_ 247 --------------------TNKAPIDALSGGRKADT--WRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred --------------------EEEEeeccccCcEEeee--eccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEE
Confidence 00001111111100000 011122334444444 4455666778999999
Q ss_pred ecCCcCCcccCCCCCcccccCCCCCCCC--cccCCCcccHHHhccc-Cccccccc
Q psy15549 441 FGDNEIGIPYVPPSGEESKENDPTKGEP--VRSEDKPRSAEQAKGE-GKVLGEKQ 492 (621)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~w~~~-~~~~~~~~ 492 (621)
..+++....+... .....+.|++||+. +++...++.+++|+.. ++.+..+.
T Consensus 305 ~~t~~~~~~~~~~-~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~ 358 (373)
T d2madh_ 305 GLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTV 358 (373)
T ss_pred CCCCcEEEEecCC-CCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEC
Confidence 9999887776543 45667899999984 4678899999999965 55544443
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.66 E-value=3.2e-15 Score=146.07 Aligned_cols=265 Identities=11% Similarity=0.005 Sum_probs=164.5
Q ss_pred CeEEEeccccccCCcceEEEEe----------cCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTG----------GADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg----------~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
.+..++|||||+ +|++. ..++.|+ +||..+++...................
T Consensus 48 ~~~~~a~SpDg~-----~l~v~~~~~~~~~~g~~d~~v~--------------v~D~~t~~~~~~~~~~~~~~~~~~~~~ 108 (355)
T d2bbkh_ 48 FLPNPVVADDGS-----FIAHASTVFSRIARGERTDYVE--------------VFDPVTLLPTADIELPDAPRFLVGTYP 108 (355)
T ss_dssp SSCEEEECTTSS-----CEEEEEEEEEETTEEEEEEEEE--------------EECTTTCCEEEEEEETTCCCCCBSCCG
T ss_pred CCCceEEcCCCC-----EEEEEeCCCccccccCCCCEEE--------------EEECCCCCEEEEEecCCcceeecCCCC
Confidence 345799999998 77654 3478898 666655543221000000011122334
Q ss_pred EEEEEccCCCEEEEEc---CCceEEEEeccCccccccceecccccccC-------CCeEEEEECCCCCEEEEE-eCCCcE
Q psy15549 85 NVVRFSPNGELLASGD---DVGKEIWYLTERESGIANVEFASDLSRHQ-------KAVNVVRFSPNGELLASG-DDESTI 153 (621)
Q Consensus 85 ~~l~~spdg~~las~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~h~-------~~V~~i~~sp~g~~l~s~-s~dg~i 153 (621)
..++|+|+|++++.+. +..+.+|+...+ .....+..+. .....+.++++++.++.. ..++.+
T Consensus 109 ~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~ 181 (355)
T d2bbkh_ 109 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK-------AFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 181 (355)
T ss_dssp GGEEECTTSSEEEEEECSSSCEEEEEETTTT-------EEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred ceEEEecCCCeeEEecCCCCceeeeeecCCC-------cEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeE
Confidence 5689999999888764 456788988776 3333332222 123345566666655443 233445
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE--ec
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGI--LT 231 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~--~~ 231 (621)
.+++...... .+...+....+.+++..++.++.++.+++|++..+..... ..
T Consensus 182 ~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 235 (355)
T d2bbkh_ 182 EITHTEVFHP--------------------------EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVE 235 (355)
T ss_dssp EEEECCCCSC--------------------------TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEE
T ss_pred EEEecccccc--------------------------eecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccC
Confidence 5555443322 2333445567788888999999999999999987754321 11
Q ss_pred cC----------CcceEEEEEcCCCCEEEEEeCC----------CcEEEEEccCceeeeecccCCCCCCCcccccccccc
Q psy15549 232 EH----------KKFVQGVAWDPKNQYVATLSSD----------RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVP 291 (621)
Q Consensus 232 ~~----------~~~v~~l~~sp~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (621)
.+ ......+++++++..++....+ ..|.+||..+++.+..+..
T Consensus 236 ~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~----------------- 298 (355)
T d2bbkh_ 236 ALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM----------------- 298 (355)
T ss_dssp SSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-----------------
T ss_pred CcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecC-----------------
Confidence 11 1123458899999988766543 3699999999988776531
Q ss_pred ccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCC
Q psy15549 292 LFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPS 371 (621)
Q Consensus 292 ~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (621)
...+.+++|+|||+.++.++
T Consensus 299 -------~~~~~~~a~spDG~~~l~v~----------------------------------------------------- 318 (355)
T d2bbkh_ 299 -------GHEIDSINVSQDEKPLLYAL----------------------------------------------------- 318 (355)
T ss_dssp -------EEEECEEEECCSSSCEEEEE-----------------------------------------------------
T ss_pred -------CCCEEEEEEcCCCCeEEEEE-----------------------------------------------------
Confidence 23457899999998543222
Q ss_pred CCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCC
Q psy15549 372 DDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDG 424 (621)
Q Consensus 372 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg 424 (621)
++.++.|++||+.+++.+..+. ++......+.+.++|
T Consensus 319 ---------------~~~d~~i~v~D~~tg~~~~~i~-~~G~~p~~i~~~d~~ 355 (355)
T d2bbkh_ 319 ---------------STGDKTLYIHDAESGEELRSVN-QLGHGPQVITTADMG 355 (355)
T ss_dssp ---------------ETTTTEEEEEETTTCCEEEEEC-CCCSSCCEEECCCCC
T ss_pred ---------------ECCCCEEEEEECCCCCEEEEEe-CcCCCccEEEeCCCC
Confidence 2357899999999999999884 354455566555543
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.66 E-value=1e-14 Score=148.47 Aligned_cols=162 Identities=17% Similarity=0.194 Sum_probs=108.7
Q ss_pred EEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEE
Q psy15549 17 LSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL 96 (621)
Q Consensus 17 ~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~l 96 (621)
..+.|.++++ ++... ++.+. +||+.+++.... -....+..|...|.++.|||||++|
T Consensus 20 ~~~~W~~d~~-----~~~~~--~~~~~--------------~~~~~t~~~~~~--~~~~~~~~~~~~i~~~~~SpDg~~i 76 (470)
T d2bgra1 20 YSLRWISDHE-----YLYKQ--ENNIL--------------VFNAEYGNSSVF--LENSTFDEFGHSINDYSISPDGQFI 76 (470)
T ss_dssp CCCEECSSSE-----EEEES--SSCEE--------------EEETTTCCEEEE--ECTTTTTTSSSCCCEEEECTTSSEE
T ss_pred cCCEeCCCCE-----EEEEc--CCcEE--------------EEECCCCCEEEE--EchhhhhhccCccceeEECCCCCEE
Confidence 4577899997 66643 66777 888887765321 1123567788899999999999999
Q ss_pred EEEcC----------CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCC
Q psy15549 97 ASGDD----------VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPE 166 (621)
Q Consensus 97 as~~d----------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~ 166 (621)
+.+++ +.+.+|++..+ . ...+..|...+..+.|||||++||... ++.+.+|+..++.....
T Consensus 77 ~~~~~~~~~~r~s~~~~~~l~d~~~~-------~-~~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~ 147 (470)
T d2bgra1 77 LLEYNYVKQWRHSYTASYDIYDLNKR-------Q-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRI 147 (470)
T ss_dssp EEEEEEEECSSSCEEEEEEEEETTTT-------E-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC
T ss_pred EEEECCcceeeeccCceEEEEECCCC-------c-ccccccCCccccccccccCcceeeEee-cccceEEECCCCceeee
Confidence 98753 45678998875 2 455778889999999999999999965 67899999988875432
Q ss_pred CCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC
Q psy15549 167 FPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD 213 (621)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d 213 (621)
.........-.....|.. .....+....+.|||||++|++...|
T Consensus 148 t~~~~~~~~~~g~~d~~~---~~~~~~~~~~~~wSPDGk~ia~~~~d 191 (470)
T d2bgra1 148 TWTGKEDIIYNGITDWVY---EEEVFSAYSALWWSPNGTFLAYAQFN 191 (470)
T ss_dssp CSCCBTTTEEESBCCHHH---HHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred eeccCCCcccccccceee---eeeecCCccccEECCCCCccceeEec
Confidence 211110000000000000 01123345668899999999987654
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.63 E-value=2.2e-15 Score=148.20 Aligned_cols=313 Identities=9% Similarity=-0.073 Sum_probs=185.6
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
+.++...++..++++ ..+..+....+|...+| +||..+++... .+..+... .++|+|
T Consensus 18 ~~g~~~~~a~~~~~~--~~~v~~~~~~~g~~~~~------------~~d~~~~~~~~-------~~~~~~~~--~~a~sp 74 (368)
T d1mdah_ 18 SDGSSCDHGPGAISR--RSHITLPAYFAGTTENW------------VSCAGCGVTLG-------HSLGAFLS--LAVAGH 74 (368)
T ss_dssp CCCCCBCCCCCCCTT--EEEEEECTTTCSSEEEE------------EEETTTTEEEE-------EEEECTTC--EEEECT
T ss_pred cCCCccccccCCCCc--ceeEEeeccCCCcceEE------------EEeCCCCcEEE-------EEeCCCCC--cceECC
Confidence 456777788888887 01112335667777755 77776665432 24444443 588999
Q ss_pred CCCEEEEEc-----------CCceEEEEeccCccccccceeccccccc-------CCCeEEEEECCCCCEEEEEe-CCCc
Q psy15549 92 NGELLASGD-----------DVGKEIWYLTERESGIANVEFASDLSRH-------QKAVNVVRFSPNGELLASGD-DEST 152 (621)
Q Consensus 92 dg~~las~~-----------d~~v~iw~~~~~~~~~~~~~~~~~~~~h-------~~~V~~i~~sp~g~~l~s~s-~dg~ 152 (621)
||++|++++ ++.|.+||..+. +....+..+ ......++|+|||++|+++. .++.
T Consensus 75 Dg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~-------~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~ 147 (368)
T d1mdah_ 75 SGSDFALASTSFARSAKGKRTDYVEVFDPVTF-------LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSA 147 (368)
T ss_dssp TSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-------CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSC
T ss_pred CCCEEEEEcccCccccccccCCeEEEEECCCC-------cEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCe
Confidence 999988754 456999998876 323322221 12234689999999998776 5789
Q ss_pred EEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE----
Q psy15549 153 IIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLG---- 228 (621)
Q Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~---- 228 (621)
+.+||+.+++... ....+..... +......++..+.||.+.+|++.......
T Consensus 148 v~~~d~~~~~~~~---------------------~~~~~~~~~~---~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~ 203 (368)
T d1mdah_ 148 AAGLSVPGASDDQ---------------------LTKSASCFHI---HPGAAATHYLGSCPASLAASDLAAAPAAAGIVG 203 (368)
T ss_dssp EEEEEETTTEEEE---------------------EEECSSCCCC---EEEETTEEECCCCTTSCEEEECCSSCCCCEECC
T ss_pred EEEEECCCCcEeE---------------------EeeccCcceE---ccCCCceEEEEcCCCCEEEEEecCCceeeeeee
Confidence 9999999887542 2222222110 01122344555566666666665433221
Q ss_pred --EeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeee
Q psy15549 229 --ILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLT 306 (621)
Q Consensus 229 --~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 306 (621)
.+..+...+..+.+.+++..+.+ ..+.+.++++..+............. .. ............++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~~g~~~~a 270 (368)
T d1mdah_ 204 AQCTGAQNCSSQAAQANYPGMLVWA--VASSILQGDIPAAGATMKAAIDGNES--------GR---KADNFRSAGFQMVA 270 (368)
T ss_dssp CCSCTTSCBCSCCEEETTTTEEEEC--BSSCCEEEECCSSCCEEECCCCSSCT--------HH---HHTTEEECSSSCEE
T ss_pred cccccccccceeecccccCcEEEEe--cCCCEEEEeecCCceEEEeecccccc--------ee---eeeeecCCCceeEE
Confidence 12234455567788888776653 45667778876655433221100000 00 00000111224567
Q ss_pred ecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEE
Q psy15549 307 FSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIA 386 (621)
Q Consensus 307 ~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (621)
+++++..+++... ++... .
T Consensus 271 ~~~~~~~~~v~~~-----~~~~~--------------------------------------------------------~ 289 (368)
T d1mdah_ 271 KLKNTDGIMILTV-----EHSRS--------------------------------------------------------C 289 (368)
T ss_dssp EETTTTEEEEEEE-----ECSSC--------------------------------------------------------T
T ss_pred EcCCCCEEEEEec-----CCCce--------------------------------------------------------e
Confidence 7777776665431 00000 0
Q ss_pred EEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCe--EEEEeCCCcEEEEEecCCcCCcccCCCC
Q psy15549 387 VATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKV--LIASSTDGYCSIISFGDNEIGIPYVPPS 454 (621)
Q Consensus 387 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~--l~s~s~dg~i~iw~~~~~~~~~~~~~~~ 454 (621)
......|.+||..+++.+..+. +...+.+++|+|||+. ++++..|+.|++||..+++.+..+....
T Consensus 290 ~~~~~~v~v~D~~t~~~~~~~~--~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~ 357 (368)
T d1mdah_ 290 LAAAENTSSVTASVGQTSGPIS--NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp TSCEEEEEEEESSSCCEEECCE--EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred ecCCceEEEEECCCCcEeEEec--CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCC
Confidence 0012468899999999888774 4457899999999973 4566788999999999999888876544
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.59 E-value=2.3e-16 Score=153.73 Aligned_cols=335 Identities=11% Similarity=0.002 Sum_probs=197.7
Q ss_pred ccCCcceEEEEecCCceEEeeeccCccccccceeEEecccccccc---cee------eccccccccCcEEEEEEccCCCE
Q psy15549 25 QEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIA---NVE------FASDLSRHQKAVNVVRFSPNGEL 95 (621)
Q Consensus 25 ~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~---~~~------~~~~~~~h~~~V~~l~~spdg~~ 95 (621)
|+.|.++.+++|+.+|.|++|++.+.+.++.|-++........-. ..+ .......|........++|||++
T Consensus 6 G~~De~y~f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~ 85 (441)
T d1qnia2 6 GELDEYYGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKY 85 (441)
T ss_dssp TCCCSEEEEEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEE
T ss_pred CCCCCEEEEEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCE
Confidence 334566788999999999999988887776665554322110000 000 00112334556667777899999
Q ss_pred EEEEc--CCceEEEEeccCccccccceeccccc-ccCCCeEEEEECCCCC--EEEEEeCCCc-----------------E
Q psy15549 96 LASGD--DVGKEIWYLTERESGIANVEFASDLS-RHQKAVNVVRFSPNGE--LLASGDDEST-----------------I 153 (621)
Q Consensus 96 las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~i~~sp~g~--~l~s~s~dg~-----------------i 153 (621)
|.+.. ++.|.++|+.+. +....+. .+...+..++|+|+|+ |++..+.+.. +
T Consensus 86 lfV~d~~~~rVavIDl~t~-------k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~ 158 (441)
T d1qnia2 86 LFINDKANTRVARIRLDIM-------KTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMF 158 (441)
T ss_dssp EEEEETTTTEEEEEETTTT-------EEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEE
T ss_pred EEEEcCCCCEEEEEECCCC-------cEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceE
Confidence 98775 778999999876 3333332 3456789999999998 5555444321 2
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC-eEEEEECCCCcEEEEecc
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN-TAIMWDVHKGKNLGILTE 232 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg-~i~vwd~~~~~~~~~~~~ 232 (621)
..+|..+.+.. ..... ......+.|+|+|+++++.+.+. .+..++..+......+..
T Consensus 159 ~~iD~~t~~v~---------------------~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v 216 (441)
T d1qnia2 159 TAIDAETMDVA---------------------WQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVV 216 (441)
T ss_dssp EEEETTTCSEE---------------------EEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEE
T ss_pred EeecCccceee---------------------EEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEe
Confidence 33444443321 11111 23567899999999999887653 344444444433222211
Q ss_pred CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC
Q psy15549 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312 (621)
Q Consensus 233 ~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 312 (621)
.. ....+++.|+|+++.. +.++.+.+++......+..+..... ...+.++|||+
T Consensus 217 ~n-~p~~~~~~~dGk~~~v-~~~~v~vvd~~~~~~v~~~IPvgks------------------------PhGv~vSPDGk 270 (441)
T d1qnia2 217 FN-VERIAAAVKAGNFKTI-GDSKVPVVDGRGESEFTRYIPVPKN------------------------PHGLNTSPDGK 270 (441)
T ss_dssp EE-HHHHHHHHHTTCCBCC-TTCCCCEEECSSSCSSEEEECCBSS------------------------CCCEEECTTSC
T ss_pred CC-ccceEEEecCCCEEEe-CCCCcEEEEcccCCceEEEEeCCCC------------------------ccCceECCCCC
Confidence 11 1123456789998765 4467778887766666665543322 36799999999
Q ss_pred eEEeccccccCCCCCCcceeeeeeeeecccC-CCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCC
Q psy15549 313 LLIAPSGCLENSDSTRKPISVTHVFTRACLN-KPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATEN 391 (621)
Q Consensus 313 ~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 391 (621)
++++++. .++++.+|++......-... ....++.+. ..+...|... .|...+..+.+..-|.
T Consensus 271 yl~~~~~----~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~----~~~glgplh~---------~fd~~g~~yts~~~ds 333 (441)
T d1qnia2 271 YFIANGK----LSPTVSVIAIDKLDDLFEDKIELRDTIVAE----PELGLGPLHT---------TFDGRGNAYTTLFIDS 333 (441)
T ss_dssp EEEEECT----TSSBEEEEEGGGHHHHTTTSSCGGGGEEEC----CBCCSCEEEE---------EECSSSEEEEEETTTT
T ss_pred EEEEeCC----cCCcEEEEEeehhhhHhhccCCcceEEEee----cccccCcccc---------eecCCceEEEcccccc
Confidence 9987764 78999999976433211000 000000000 0011111111 1333455566666799
Q ss_pred cEEEEeCCC---------Cc-eeEEE----ecccccceEEEEEcCCCCeEEEEe
Q psy15549 392 NILLYDTQH---------AS-PFAFI----ANIHYTKLTDITWSSDGKVLIASS 431 (621)
Q Consensus 392 ~i~iwd~~~---------~~-~~~~~----~~~h~~~v~~~~~spdg~~l~s~s 431 (621)
.|..|++.. .. .+..+ ..+|...+.+.+++|||+||++++
T Consensus 334 ~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~ 387 (441)
T d1qnia2 334 QVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLS 387 (441)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEE
T ss_pred eEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecC
Confidence 999999742 11 22222 136888888889999999999994
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.57 E-value=5e-14 Score=143.27 Aligned_cols=153 Identities=12% Similarity=0.127 Sum_probs=115.1
Q ss_pred EEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeC---------CCcEEE
Q psy15549 85 NVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD---------ESTIIV 155 (621)
Q Consensus 85 ~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~---------dg~i~v 155 (621)
..+.|.+++.++.. .++.+.+|+...+... .+.....+..|...|.++.|||||++|++++. ++.+.+
T Consensus 20 ~~~~W~~d~~~~~~-~~~~~~~~~~~t~~~~--~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l 96 (470)
T d2bgra1 20 YSLRWISDHEYLYK-QENNILVFNAEYGNSS--VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (470)
T ss_dssp CCCEECSSSEEEEE-SSSCEEEEETTTCCEE--EEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred cCCEeCCCCEEEEE-cCCcEEEEECCCCCEE--EEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEE
Confidence 35779999987764 4778999999987532 11122356677788999999999999998753 567899
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC--
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEH-- 233 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-- 233 (621)
||+.+++. ..+..+...+..+.|||||+.||... ++.+++|+..+++.......+
T Consensus 97 ~d~~~~~~----------------------~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~ 153 (470)
T d2bgra1 97 YDLNKRQL----------------------ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKE 153 (470)
T ss_dssp EETTTTEE----------------------CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBT
T ss_pred EECCCCcc----------------------cccccCCccccccccccCcceeeEee-cccceEEECCCCceeeeeeccCC
Confidence 99998864 34567888999999999999999865 778999999888766544321
Q ss_pred ----------------CcceEEEEEcCCCCEEEEEeCCCc-EEEEEc
Q psy15549 234 ----------------KKFVQGVAWDPKNQYVATLSSDRS-LRTYSI 263 (621)
Q Consensus 234 ----------------~~~v~~l~~sp~~~~l~s~~~dg~-i~iwd~ 263 (621)
.+....+.|||||++|++...|.. +..|.+
T Consensus 154 ~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~ 200 (470)
T d2bgra1 154 DIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY 200 (470)
T ss_dssp TTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred CcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEE
Confidence 223456889999999999876643 555543
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.42 E-value=8.5e-11 Score=114.10 Aligned_cols=225 Identities=10% Similarity=0.014 Sum_probs=122.9
Q ss_pred ccCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCE--EEEEe-CCCcEEEE
Q psy15549 80 HQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGEL--LASGD-DESTIIVW 156 (621)
Q Consensus 80 h~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~--l~s~s-~dg~i~vw 156 (621)
....+..|+|+|++++|.++..+.+..|.+...... ..... .........+.++++++. ++++. ..++|..+
T Consensus 38 ~~~~~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~----~~~~~-~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~ 112 (365)
T d1jofa_ 38 QDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEI----VHEAS-HPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEE----EEEEE-EECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCCCCEEEEcCCCCEEEEEeCCcEEEEEEeCCCCe----EEEee-ecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEe
Confidence 344567799999999999988888888888754311 11111 112234556788888874 33332 34566655
Q ss_pred EccCCCCCCCCCCCCccccccccccee-eeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCC-cEE--EEe-
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWI-VTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKG-KNL--GIL- 230 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~-~~~--~~~- 230 (621)
.+.......... ... ....... ...........+.++.|+|||++|++++. ...|.+|+.... ... ...
T Consensus 113 ~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~ 187 (365)
T d1jofa_ 113 PFYKFAGYGNVF----SVS-ETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVD 187 (365)
T ss_dssp EESSSCCEEEEE----EEC-TTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEE
T ss_pred EccCCCCcceeE----eee-ecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeecccee
Confidence 543322110000 000 0000000 11112233445889999999998888765 457888876543 221 111
Q ss_pred -ccCCcceEEEEEcCCCCEEEEEeC-CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeec
Q psy15549 231 -TEHKKFVQGVAWDPKNQYVATLSS-DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 231 -~~~~~~v~~l~~sp~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 308 (621)
.......+.++|+|+++++++..+ +++|.+|++..+...........+...... ................+.++
T Consensus 188 ~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~s 263 (365)
T d1jofa_ 188 APDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI----PDRDPETGKGLYRADVCALT 263 (365)
T ss_dssp CSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC----CCBCTTTSSBSEEEEEEEEC
T ss_pred ecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccc----cccccccccccCCccceEEC
Confidence 123456789999999999876654 788999998765432221111111000000 00000111222334678999
Q ss_pred CCCCeEEecc
Q psy15549 309 PDGQLLIAPS 318 (621)
Q Consensus 309 pdg~~l~~~s 318 (621)
|||++|+++.
T Consensus 264 pdG~~lyvsn 273 (365)
T d1jofa_ 264 FSGKYMFASS 273 (365)
T ss_dssp TTSSEEEEEE
T ss_pred CCCCEEEEEc
Confidence 9999998865
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.41 E-value=1.5e-12 Score=127.39 Aligned_cols=228 Identities=5% Similarity=-0.139 Sum_probs=133.4
Q ss_pred EEEeccccccCCcceEEEEe----------cCCceEEeeeccCccccccceeEEeccccccccceeec-cccccccCcEE
Q psy15549 17 LSVDIQLKQEKDNCYRIVTG----------GADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFA-SDLSRHQKAVN 85 (621)
Q Consensus 17 ~~l~~spd~~~~~~~~l~tg----------~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~-~~~~~h~~~V~ 85 (621)
..++|+|||+ +|++. +.|+.|. +||..+++.... +... ...........
T Consensus 68 ~~~a~spDg~-----~i~~~~~~~~~~~~g~~d~~v~--------------v~D~~t~~~~~~-i~~p~~~~~~~g~~p~ 127 (368)
T d1mdah_ 68 SLAVAGHSGS-----DFALASTSFARSAKGKRTDYVE--------------VFDPVTFLPIAD-IELPDAPRFSVGPRVH 127 (368)
T ss_dssp CEEEECTTSS-----CEEEEEEEETTTTSSSEEEEEE--------------EECTTTCCEEEE-EEETTSCSCCBSCCTT
T ss_pred CcceECCCCC-----EEEEEcccCccccccccCCeEE--------------EEECCCCcEeee-ecCCccceecccCCcc
Confidence 3689999998 77764 3477788 666655443221 0000 00001112234
Q ss_pred EEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCC
Q psy15549 86 VVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163 (621)
Q Consensus 86 ~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~ 163 (621)
.++|+|||++|+++. ++.+.+||+... +....+..+..... +......++..+.||.+.+|++.....
T Consensus 128 ~~a~SpDGk~l~va~~~~~~v~~~d~~~~-------~~~~~~~~~~~~~~---~~~~~~~~v~~~~Dg~~~~~~~~~~~~ 197 (368)
T d1mdah_ 128 IIGNCASSACLLFFLFGSSAAAGLSVPGA-------SDDQLTKSASCFHI---HPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp SEEECTTSSCEEEEECSSSCEEEEEETTT-------EEEEEEECSSCCCC---EEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEECCCC-------cEeEEeeccCcceE---ccCCCceEEEEcCCCCEEEEEecCCce
Confidence 689999999998775 778999999887 44444433332211 111234566667788888887765543
Q ss_pred CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec--cC--------
Q psy15549 164 LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT--EH-------- 233 (621)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~-------- 233 (621)
..... .......+...+..+.+.+++..+.+. .+.++++++..+....... .+
T Consensus 198 ~~~~~---------------~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (368)
T d1mdah_ 198 AAGIV---------------GAQCTGAQNCSSQAAQANYPGMLVWAV--ASSILQGDIPAAGATMKAAIDGNESGRKADN 260 (368)
T ss_dssp CCEEC---------------CCCSCTTSCBCSCCEEETTTTEEEECB--SSCCEEEECCSSCCEEECCCCSSCTHHHHTT
T ss_pred eeeee---------------ecccccccccceeecccccCcEEEEec--CCCEEEEeecCCceEEEeecccccceeeeee
Confidence 21110 001223344455667788887655543 4567777766554432211 11
Q ss_pred --CcceEEEEEcCCCCEEEEEeCC---------CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccce
Q psy15549 234 --KKFVQGVAWDPKNQYVATLSSD---------RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFF 302 (621)
Q Consensus 234 --~~~v~~l~~sp~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 302 (621)
......++++|++..++....+ ..|.+||..+++.+..+.. ...+
T Consensus 261 ~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~------------------------~~~~ 316 (368)
T d1mdah_ 261 FRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN------------------------GHDS 316 (368)
T ss_dssp EEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE------------------------EEEE
T ss_pred ecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecC------------------------CCce
Confidence 1123457889999887765432 2589999999988776531 2345
Q ss_pred eeeeecCCCCeEE
Q psy15549 303 RRLTFSPDGQLLI 315 (621)
Q Consensus 303 ~~~~~spdg~~l~ 315 (621)
.+++|+|||+.++
T Consensus 317 ~~~a~spDG~~~l 329 (368)
T d1mdah_ 317 DAIIAAQDGASDN 329 (368)
T ss_dssp CEEEECCSSSCEE
T ss_pred eEEEECCCCCEEE
Confidence 7899999997543
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.34 E-value=6e-12 Score=122.20 Aligned_cols=301 Identities=10% Similarity=-0.006 Sum_probs=170.2
Q ss_pred EEEEeCCCcEEEEEccCCCCCCCCCCCCccc---cccccc---cee---eeeeecCCCCCeEEEEECCCCCEEEEEe-CC
Q psy15549 144 LASGDDESTIIVWKQKTDQDLPEFPSSNLDE---ENVNKE---HWI---VTKILRGHLEDVYDISWSPTSTHLISGS-VD 213 (621)
Q Consensus 144 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~---~~~~~~---~~~---~~~~~~~~~~~v~~i~~spd~~~l~s~~-~d 213 (621)
+++++.+|.|++|++.+++.+..++....+. ...... ... ....-..|........++|||++|++.. .+
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~ 93 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN 93 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence 5678889999999999988766654321111 000000 000 0011223455566677789999987765 57
Q ss_pred CeEEEEECCCCcEEEEec-cCCcceEEEEEcCCCC--EEEEEeCCC-----------------cEEEEEccCceeeeecc
Q psy15549 214 NTAIMWDVHKGKNLGILT-EHKKFVQGVAWDPKNQ--YVATLSSDR-----------------SLRTYSIQSKKVISRAC 273 (621)
Q Consensus 214 g~i~vwd~~~~~~~~~~~-~~~~~v~~l~~sp~~~--~l~s~~~dg-----------------~i~iwd~~~~~~~~~~~ 273 (621)
+.|.++|+.+++....+. .+...+..++|+|+|+ |++..+.+. .+..+|..+.+...++.
T Consensus 94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~ 173 (441)
T d1qnia2 94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVI 173 (441)
T ss_dssp TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEE
T ss_pred CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEe
Confidence 899999999998877664 4567789999999998 444444332 12345666555544442
Q ss_pred cCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCC-Ccce--------eeeeeeeecc---
Q psy15549 274 RSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDST-RKPI--------SVTHVFTRAC--- 341 (621)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~-i~~~--------~~~~~~~~~~--- 341 (621)
. ......++|+|||+++++++ .+.. +..+ +.........
T Consensus 174 v------------------------~~~p~~v~~spdGk~a~vt~-----~nse~~~~id~~t~~~~d~i~v~n~p~~~~ 224 (441)
T d1qnia2 174 V------------------------DGNLDNTDADYTGKYATSTC-----YNSERAVDLAGTMRNDRDWVVVFNVERIAA 224 (441)
T ss_dssp E------------------------SSCCCCEEECSSSSEEEEEE-----SCTTCCSSHHHHTCSSBCEEEEEEHHHHHH
T ss_pred c------------------------CCCccceEECCCCCEEEEEe-----cCCCceEEEeccCcceEEEEEeCCccceEE
Confidence 1 22346899999999998877 2221 1111 1111110000
Q ss_pred --cCCCceecCCcccceeee-eccceeeec--CCCCCCCCccCCCcEEEEEE-cCCcEEEEeCCCCcee--------EEE
Q psy15549 342 --LNKPAVCLPSLQYYSVAV-KCCPVLFEL--KPSDDKPLFKLPYRIVIAVA-TENNILLYDTQHASPF--------AFI 407 (621)
Q Consensus 342 --~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~--------~~~ 407 (621)
.........+....+... .-...+... ........++++|+++++++ .+++|.+||+.+.... ..+
T Consensus 225 ~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~ 304 (441)
T d1qnia2 225 AVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTI 304 (441)
T ss_dssp HHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGE
T ss_pred EecCCCEEEeCCCCcEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEE
Confidence 000000111111001000 001111111 11122345667888877665 5899999998653211 000
Q ss_pred --ecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC------Cc----CCccc-----CCCCCcccccCCCCCCCCcc
Q psy15549 408 --ANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD------NE----IGIPY-----VPPSGEESKENDPTKGEPVR 470 (621)
Q Consensus 408 --~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~------~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~ 470 (621)
.....-.....+|+++|..+.+...|..|..|++.. ++ ....+ .+|........++|||+.++
T Consensus 305 ~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~ 384 (441)
T d1qnia2 305 VAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLV 384 (441)
T ss_dssp EECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEE
T ss_pred EeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEE
Confidence 001111245568999998888889999999999852 11 22222 46777788889999999998
Q ss_pred cCC
Q psy15549 471 SED 473 (621)
Q Consensus 471 s~~ 473 (621)
+..
T Consensus 385 s~~ 387 (441)
T d1qnia2 385 VLS 387 (441)
T ss_dssp EEE
T ss_pred ecC
Confidence 763
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=4.7e-09 Score=104.74 Aligned_cols=362 Identities=10% Similarity=0.062 Sum_probs=185.4
Q ss_pred EeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEEEE
Q psy15549 19 VDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS 98 (621)
Q Consensus 19 l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las 98 (621)
..|.+++. ++. -..+|.|. +|++.++..... -....+ ..-.+....|||||++|+.
T Consensus 22 ~~W~~~~~-----~~~-~~~~g~i~--------------~~~~~~~~~~~l--~~~~~~--~~~~~~~~~~SpD~~~vl~ 77 (465)
T d1xfda1 22 AKWISDTE-----FIY-REQKGTVR--------------LWNVETNTSTVL--IEGKKI--ESLRAIRYEISPDREYALF 77 (465)
T ss_dssp CCBSSSSC-----BCC-CCSSSCEE--------------EBCGGGCCCEEE--ECTTTT--TTTTCSEEEECTTSSEEEE
T ss_pred CEEeCCCc-----EEE-EeCCCcEE--------------EEECCCCCEEEE--EcCccc--cccccceeEECCCCCeEEE
Confidence 45778875 443 45567787 677666543211 001111 2235677889999999887
Q ss_pred EcC----------CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCC
Q psy15549 99 GDD----------VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFP 168 (621)
Q Consensus 99 ~~d----------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~ 168 (621)
..+ +.+.++|+..+.. ..+.........+....|||||+.||... ++.|.+.+..++...+...
T Consensus 78 ~~~~~~~~r~s~~~~~~i~d~~~~~~-----~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~ 151 (465)
T d1xfda1 78 SYNVEPIYQHSYTGYYVLSKIPHGDP-----QSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVS 151 (465)
T ss_dssp EESCCCCSSSCCCSEEEEEESSSCCC-----EECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEEC
T ss_pred EEcccceeEeeccccEEEEEccCCce-----eeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEec
Confidence 653 3467888876632 23333333445566789999999998876 5678888877665432211
Q ss_pred CCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC-C---------------------------------
Q psy15549 169 SSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD-N--------------------------------- 214 (621)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d-g--------------------------------- 214 (621)
.............|.... .....-.++-|||||++||....| .
T Consensus 152 ~g~~~~i~nG~~d~vyee---e~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~ 228 (465)
T d1xfda1 152 TGKEGVIYNGLSDWLYEE---EILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSI 228 (465)
T ss_dssp CCBTTTEEEEECCHHHHH---TTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEE
T ss_pred ccCcceeeccccchhhhh---hhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCce
Confidence 100000000000000000 001122567899999999986421 2
Q ss_pred eEEEEECCCCcEEEEe------ccCCcceEEEEEcCCCCEEEEEeC-C---CcEEEEEccCceeeeecccCCCCCCCccc
Q psy15549 215 TAIMWDVHKGKNLGIL------TEHKKFVQGVAWDPKNQYVATLSS-D---RSLRTYSIQSKKVISRACRSKLPVDSSHE 284 (621)
Q Consensus 215 ~i~vwd~~~~~~~~~~------~~~~~~v~~l~~sp~~~~l~s~~~-d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 284 (621)
.+.++|+.++...... ......+..+.|+|++++++.... + ..|.++|..+++....+......
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~------ 302 (465)
T d1xfda1 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEA------ 302 (465)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSS------
T ss_pred eEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCc------
Confidence 2445555444322111 112234678899999886665433 2 25888899888765443211100
Q ss_pred cccccccccccCCcccceeeeeecCCCCeEEec--cccccCCCCCCcceeeeeeee-ecccCCCceecCCcccceeee-e
Q psy15549 285 LFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP--SGCLENSDSTRKPISVTHVFT-RACLNKPAVCLPSLQYYSVAV-K 360 (621)
Q Consensus 285 ~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~--s~~~~~~d~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~ 360 (621)
|. ...-....|++||+.++.. +. .++.-.++.+..... ..........+......|..+ .
T Consensus 303 --------wv----~~~~~~p~~~~dg~~~~fi~~se----~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~ 366 (465)
T d1xfda1 303 --------WL----HRQNEEPVFSKDGRKFFFIRAIP----QGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILA 366 (465)
T ss_dssp --------CC----CCCCCCCEECTTSCSEEEEEEEC----CSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEE
T ss_pred --------eE----eccCCceeEccCCCeeEEEEeee----ecccCceEEEEeccccccCCCceeEEeccCCceEEEEEE
Confidence 00 0011346899999865432 21 333334443321110 011122222333334333332 2
Q ss_pred ccceeeecCCCCCCCCccCCCcEEE-EEEcCC----cEEEEeCCCCceeEEEe--cccccceEEEEEcCCCCeEEEEeCC
Q psy15549 361 CCPVLFELKPSDDKPLFKLPYRIVI-AVATEN----NILLYDTQHASPFAFIA--NIHYTKLTDITWSSDGKVLIASSTD 433 (621)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~dg----~i~iwd~~~~~~~~~~~--~~h~~~v~~~~~spdg~~l~s~s~d 433 (621)
+.. .++.|. ++..++ .++-.++..+.....+. ........++.|||+|++++..+..
T Consensus 367 ~d~----------------~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~ 430 (465)
T d1xfda1 367 YDE----------------KGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEG 430 (465)
T ss_dssp EET----------------TTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCS
T ss_pred EcC----------------CCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEeec
Confidence 222 233343 333222 34433444333222111 1234456799999999998855432
Q ss_pred ---CcEEEEEecCCcCCcccC
Q psy15549 434 ---GYCSIISFGDNEIGIPYV 451 (621)
Q Consensus 434 ---g~i~iw~~~~~~~~~~~~ 451 (621)
-.+.+++..+++.+..+.
T Consensus 431 ~~~P~~~~~~~~~~~~~~~Le 451 (465)
T d1xfda1 431 PGVPMVTVHNTTDKKKMFDLE 451 (465)
T ss_dssp SSSCCEEEEETTTCCEEEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEc
Confidence 457788877776655553
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.21 E-value=1e-08 Score=94.51 Aligned_cols=210 Identities=12% Similarity=0.070 Sum_probs=129.2
Q ss_pred cceeeecCCCCeEEEeccccccCCcceEEEEecC-CceEEeeeccCccccccceeEEeccccccccceeeccccccccCc
Q psy15549 5 IPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGA-DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKA 83 (621)
Q Consensus 5 ~~~~~~~h~~~v~~l~~spd~~~~~~~~l~tg~~-dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~ 83 (621)
.++.+..+...+.+.+|||||+ .||.... .+...+| +.+...+.. ..+..+.+.
T Consensus 30 ~~~~l~~~~~~~~sP~wSPDGk-----~IAf~~~~~~~~~~~------------~~~~~~~~~--------~~~~~~~~~ 84 (269)
T d2hqsa1 30 NQFVVHRSPQPLMSPAWSPDGS-----KLAYVTFESGRSALV------------IQTLANGAV--------RQVASFPRH 84 (269)
T ss_dssp SCEEEEEESSCEEEEEECTTSS-----EEEEEECTTSSCEEE------------EEETTTCCE--------EEEECCSSC
T ss_pred CcEEEecCCCceeeeEECCCCC-----EEEEEEeeccCccee------------eeecccCce--------eEEeeeecc
Confidence 3445555677889999999999 8876533 3333311 333333322 124567788
Q ss_pred EEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEE-EeCCCc--EEEEEc
Q psy15549 84 VNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS-GDDEST--IIVWKQ 158 (621)
Q Consensus 84 V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s-~s~dg~--i~vwd~ 158 (621)
+....|+|+|+.++... .+...++...... ........+........+++++..++. ...+|. |.+.++
T Consensus 85 ~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~ 158 (269)
T d2hqsa1 85 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS------GQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI 158 (269)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTT------CCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred cccceecCCCCeeeEeeecCCccceeeccccc------ccceeeeeccccccccccccccccceecccccCCceEeeeec
Confidence 89999999999998765 3344444443332 112222234444556677887765544 444554 444555
Q ss_pred cCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC---eEEEEECCCCcEEEEeccCCc
Q psy15549 159 KTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN---TAIMWDVHKGKNLGILTEHKK 235 (621)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~ 235 (621)
..... ..+..+........|+|+++.++..+.++ .+.+.+...+.. .+..+..
T Consensus 159 ~~~~~----------------------~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~ 214 (269)
T d2hqsa1 159 NGGAP----------------------QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTF 214 (269)
T ss_dssp TSSCC----------------------EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EECCCSS
T ss_pred ccccc----------------------eeeecccccccccccccccceeEEEeecCCceeeeEeecccccc--eEeecCc
Confidence 54432 33345566778889999999888776643 445555554443 3334555
Q ss_pred ceEEEEEcCCCCEEEEEeCC---CcEEEEEccCceee
Q psy15549 236 FVQGVAWDPKNQYVATLSSD---RSLRTYSIQSKKVI 269 (621)
Q Consensus 236 ~v~~l~~sp~~~~l~s~~~d---g~i~iwd~~~~~~~ 269 (621)
......|+|||++|+..+.. ..|.++++..+...
T Consensus 215 ~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~ 251 (269)
T d2hqsa1 215 LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA 251 (269)
T ss_dssp SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEE
T ss_pred cccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEE
Confidence 66788999999998866543 46888998766543
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.19 E-value=4.3e-09 Score=101.80 Aligned_cols=213 Identities=8% Similarity=0.009 Sum_probs=119.3
Q ss_pred CCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEcc
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 91 (621)
...++.-|+|+|+++ +|++... +.+. .|.+........ .. ..........+++++
T Consensus 38 ~~~~~s~la~s~d~~-----~ly~~~~-~~~~--------------~~~i~~~~~~~~----~~-~~~~~~~p~~v~~~~ 92 (365)
T d1jofa_ 38 QDEPISWMTFDHERK-----NIYGAAM-KKWS--------------SFAVKSPTEIVH----EA-SHPIGGHPRANDADT 92 (365)
T ss_dssp TTCCCSEEEECTTSS-----EEEEEEB-TEEE--------------EEEEEETTEEEE----EE-EEECCSSGGGGCTTS
T ss_pred CCCCCCEEEEcCCCC-----EEEEEeC-CcEE--------------EEEEeCCCCeEE----Ee-eecCCCCcEEEEECC
Confidence 455677899999998 7777654 4566 454443221111 00 011123345667888
Q ss_pred CCCE--EEEEc--CCceEEEEeccCccccccce---------eccc-ccccCCCeEEEEECCCCCEEEEEeC-CCcEEEE
Q psy15549 92 NGEL--LASGD--DVGKEIWYLTERESGIANVE---------FASD-LSRHQKAVNVVRFSPNGELLASGDD-ESTIIVW 156 (621)
Q Consensus 92 dg~~--las~~--d~~v~iw~~~~~~~~~~~~~---------~~~~-~~~h~~~V~~i~~sp~g~~l~s~s~-dg~i~vw 156 (621)
+++. ++++. .+.+..+.+.........+. .... -......+.++.|+|+|+++++++. ...|.+|
T Consensus 93 ~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~ 172 (365)
T d1jofa_ 93 NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTH 172 (365)
T ss_dssp CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEE
Confidence 8873 44443 33444443322211000000 0000 0112234789999999998888764 3478888
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCcEE--EE---e
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV-DNTAIMWDVHKGKNL--GI---L 230 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~-dg~i~vwd~~~~~~~--~~---~ 230 (621)
+......+... -...........+.++|+|+++++++..+ ++.|.+|++..+... .. .
T Consensus 173 ~~~~~g~~~~~----------------~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~ 236 (365)
T d1jofa_ 173 RKLASGEVELV----------------GSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSF 236 (365)
T ss_dssp EECTTSCEEEE----------------EEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred EccCCCceeec----------------cceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeee
Confidence 76654322100 00111234567899999999998866654 789999998765422 11 1
Q ss_pred c--------------cCCcceEEEEEcCCCCEEEEEeC-C-----CcEEEEEccC
Q psy15549 231 T--------------EHKKFVQGVAWDPKNQYVATLSS-D-----RSLRTYSIQS 265 (621)
Q Consensus 231 ~--------------~~~~~v~~l~~sp~~~~l~s~~~-d-----g~i~iwd~~~ 265 (621)
. .+......+.++|+|++|+++.. + +.|..|++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~ 291 (365)
T d1jofa_ 237 PLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD 291 (365)
T ss_dssp ESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT
T ss_pred ccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecC
Confidence 0 11223567899999999987643 1 2366777654
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.16 E-value=2.7e-08 Score=91.65 Aligned_cols=225 Identities=15% Similarity=0.123 Sum_probs=134.1
Q ss_pred cccccccCCCeEEEEECCCCCEEEEEeCCC---cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEE
Q psy15549 122 ASDLSRHQKAVNVVRFSPNGELLASGDDES---TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198 (621)
Q Consensus 122 ~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 198 (621)
...+..+...+...+|||||+.||...... .+.+.+...+.. ..+..+.......
T Consensus 31 ~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~ 88 (269)
T d2hqsa1 31 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV----------------------RQVASFPRHNGAP 88 (269)
T ss_dssp CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE----------------------EEEECCSSCEEEE
T ss_pred cEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCce----------------------eEEeeeecccccc
Confidence 334445667788999999999999765433 455666555542 4556677888999
Q ss_pred EECCCCCEEEEEeC-CCe--EEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEe-CCCc--EEEEEccCceeeeec
Q psy15549 199 SWSPTSTHLISGSV-DNT--AIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLS-SDRS--LRTYSIQSKKVISRA 272 (621)
Q Consensus 199 ~~spd~~~l~s~~~-dg~--i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~-~dg~--i~iwd~~~~~~~~~~ 272 (621)
.|+|+|+.++.... ++. +..+........ .............+++++..++..+ .+|. |.+.++..+......
T Consensus 89 ~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~ 167 (269)
T d2hqsa1 89 AFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT 167 (269)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC
T ss_pred eecCCCCeeeEeeecCCccceeecccccccce-eeeeccccccccccccccccceecccccCCceEeeeecccccceeee
Confidence 99999998887664 332 333333333333 3333444455667888777655444 4554 445555444322111
Q ss_pred ccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCc
Q psy15549 273 CRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSL 352 (621)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~ 352 (621)
..........|+|+++.++..+. ++
T Consensus 168 ------------------------~~~~~~~~~~~spdg~~~~~~~~-----~~-------------------------- 192 (269)
T d2hqsa1 168 ------------------------WEGSQNQDADVSSDGKFMVMVSS-----NG-------------------------- 192 (269)
T ss_dssp ------------------------CSSSEEEEEEECTTSSEEEEEEE-----CS--------------------------
T ss_pred ------------------------cccccccccccccccceeEEEee-----cC--------------------------
Confidence 11223466789999998887651 10
Q ss_pred ccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeC
Q psy15549 353 QYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASST 432 (621)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~ 432 (621)
....|.+++...+.. ..+ .+........|||||++|+..+.
T Consensus 193 ------------------------------------~~~~i~~~~~~~~~~-~~~--~~~~~~~~p~~SPDG~~i~f~s~ 233 (269)
T d2hqsa1 193 ------------------------------------GQQHIAKQDLATGGV-QVL--SSTFLDETPSLAPNGTMVIYSSS 233 (269)
T ss_dssp ------------------------------------SCEEEEEEETTTCCE-EEC--CCSSSCEEEEECTTSSEEEEEEE
T ss_pred ------------------------------------CceeeeEeecccccc-eEe--ecCccccceEECCCCCEEEEEEc
Confidence 111344455544432 222 24456778899999999886553
Q ss_pred ---CCcEEEEEecCCcCCcccCCCCCcccccCCCC
Q psy15549 433 ---DGYCSIISFGDNEIGIPYVPPSGEESKENDPT 464 (621)
Q Consensus 433 ---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (621)
...|++++++.+.. ..+....+.+....++|
T Consensus 234 ~~~~~~l~~~~~dg~~~-~~lt~~~g~~~~p~WSP 267 (269)
T d2hqsa1 234 QGMGSVLNLVSTDGRFK-ARLPATDGQVKFPAWSP 267 (269)
T ss_dssp ETTEEEEEEEETTSCCE-EECCCSSSEEEEEEECC
T ss_pred CCCCcEEEEEECCCCCE-EEEeCCCCcEEeEEeCC
Confidence 34688899887654 44555455555555554
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.11 E-value=2.4e-08 Score=93.71 Aligned_cols=156 Identities=15% Similarity=0.065 Sum_probs=103.2
Q ss_pred cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCC
Q psy15549 83 AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTD 161 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~ 161 (621)
.+..++++|||+++++.. ++.|..|+.... ...+......+.+++|+++|+++++...++.+.+|+....
T Consensus 29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~---------~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~ 99 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNHEVGEIVSITPDGN---------QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS 99 (302)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC---------EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred CcCCEEECCCCCEEEEeCCCCEEEEEeCCCC---------EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEeccc
Confidence 578899999999988877 555555543321 2233445577999999999999999888888988887654
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc---------
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE--------- 232 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--------- 232 (621)
..... .............+++.++++++++-+.++.+..++...+........
T Consensus 100 ~~~~~------------------~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (302)
T d2p4oa1 100 DGTVE------------------TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSE 161 (302)
T ss_dssp TSCEE------------------EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTT
T ss_pred cccee------------------eccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeecc
Confidence 32110 011123445688999999999988888889999999877653322211
Q ss_pred -CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCc
Q psy15549 233 -HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSK 266 (621)
Q Consensus 233 -~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~ 266 (621)
.......+.++. +..+++.+..+.|..++....
T Consensus 162 ~~~~~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~ 195 (302)
T d2p4oa1 162 SVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDST 195 (302)
T ss_dssp CCSCSEEEEEEET-TEEEEEETTTTEEEEEEBCTT
T ss_pred CcccccccccccC-CceeeecCCCCeEEecccccc
Confidence 112344555553 233444556777887777554
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.06 E-value=3.7e-08 Score=90.14 Aligned_cols=157 Identities=8% Similarity=0.009 Sum_probs=98.4
Q ss_pred CcEEEEEEccCCCEEEEEc-C-CceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEcc
Q psy15549 82 KAVNVVRFSPNGELLASGD-D-VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQK 159 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d-~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~ 159 (621)
-.-..|+++++|++.++.. . +.+..++..... .......+ ......++++++++++++....+.+++++-.
T Consensus 14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~------~~~~~~~~-~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~ 86 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG------TTVLPFNG-LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGS 86 (260)
T ss_dssp CCEEEEEECTTCCEEEEECSSSCEEEEEC----C------EEECCCCS-CCSCCCEEECTTCCEEEEETTTEEEEECTTC
T ss_pred CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCce------EEEeccCC-ccCceEEEEcCCCCEEEeeeeeceeeeeeec
Confidence 3457999999999777654 3 334444433321 11112221 2345678999999887777666666665544
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEE
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQG 239 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 239 (621)
+...+ ..........++++.++++++++-.....+..++...................
T Consensus 87 ~~~~~----------------------~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 144 (260)
T d1rwia_ 87 NNQTV----------------------LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDG 144 (260)
T ss_dssp SCCEE----------------------CCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCE
T ss_pred cceee----------------------eeeeeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcce
Confidence 33321 11122356789999999988877666777888776554432222223345678
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEccCce
Q psy15549 240 VAWDPKNQYVATLSSDRSLRTYSIQSKK 267 (621)
Q Consensus 240 l~~sp~~~~l~s~~~dg~i~iwd~~~~~ 267 (621)
++++++++.+++...++.|..++.....
T Consensus 145 i~~~~~g~~~v~~~~~~~i~~~d~~~~~ 172 (260)
T d1rwia_ 145 VAVDNSGNVYVTDTDNNRVVKLEAESNN 172 (260)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred eeecCCCCEeeeccccccccccccccce
Confidence 9999999988887788889999876543
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.01 E-value=5.1e-08 Score=89.15 Aligned_cols=227 Identities=7% Similarity=0.017 Sum_probs=137.5
Q ss_pred CeEEEeccccccCCcceEEEE-ecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVT-GGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~t-g~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
.=.+|+++++|. ++++ .+..+.+. .++......... ...+ ......++++++|
T Consensus 15 ~P~~vavd~dG~-----i~v~~~~~~~~i~--------------~~~~~~~~~~~~------~~~~-~~~p~gvav~~~g 68 (260)
T d1rwia_ 15 SPSGVAVDSAGN-----VYVTSEGMYGRVV--------------KLATGSTGTTVL------PFNG-LYQPQGLAVDGAG 68 (260)
T ss_dssp CEEEEEECTTCC-----EEEEECSSSCEEE--------------EEC----CEEEC------CCCS-CCSCCCEEECTTC
T ss_pred CCCEEEEcCCCC-----EEEEEcCCCCEEE--------------EEcCCCceEEEe------ccCC-ccCceEEEEcCCC
Confidence 347899999997 5555 45556666 443332221111 1111 2345678999999
Q ss_pred CEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcc
Q psy15549 94 ELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLD 173 (621)
Q Consensus 94 ~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~ 173 (621)
+++++...+.+..+...... ...... .......++++.++++++++-.....+.+++.......
T Consensus 69 ~i~v~d~~~~~i~~~~~~~~------~~~~~~-~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~--------- 132 (260)
T d1rwia_ 69 TVYVTDFNNRVVTLAAGSNN------QTVLPF-DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT--------- 132 (260)
T ss_dssp CEEEEETTTEEEEECTTCSC------CEECCC-CSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCE---------
T ss_pred CEEEeeeeeceeeeeeeccc------eeeeee-eeeeecccccccccceeEeeccccccccccccccceee---------
Confidence 98877665554333322211 222222 22345789999999988877666666777765544321
Q ss_pred cccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEe
Q psy15549 174 EENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLS 253 (621)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~ 253 (621)
............++++++++++++...++.|..++...................++++++|+++++..
T Consensus 133 ------------~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~ 200 (260)
T d1rwia_ 133 ------------VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEH 200 (260)
T ss_dssp ------------ECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEET
T ss_pred ------------eeeecccCCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeec
Confidence 11112223457899999999888888888999999875544433334455678999999999888777
Q ss_pred CCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 254 SDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 254 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
..+.|..++...... ..+.. .. -.....|+++++|+.+++-.
T Consensus 201 ~~~~i~~~~~~~~~~-~~~~~---------------------~~-~~~P~~i~~d~~g~l~vad~ 242 (260)
T d1rwia_ 201 NTNQVVKLLAGSTTS-TVLPF---------------------TG-LNTPLAVAVDSDRTVYVADR 242 (260)
T ss_dssp TTTEEEEECTTCSCC-EECCC---------------------CS-CCCEEEEEECTTCCEEEEEG
T ss_pred CCCEEEEEeCCCCeE-EEEcc---------------------CC-CCCeEEEEEeCCCCEEEEEC
Confidence 778888887654321 11110 00 11236899999998766544
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.99 E-value=8.5e-07 Score=81.73 Aligned_cols=245 Identities=13% Similarity=0.193 Sum_probs=150.1
Q ss_pred cEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCC-CEEEEE-eCCCcEEEEEcc
Q psy15549 83 AVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG-ELLASG-DDESTIIVWKQK 159 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g-~~l~s~-s~dg~i~vwd~~ 159 (621)
....|+++++|+++++-. .+.|++|+....- ...+.....-.+.......+++.++. .++++. +.++.|.+++..
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~G~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 101 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKEGRF--KFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY 101 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTTSCE--EEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred CccEEEEcCCCCEEEEECCCCEEEEEeCCCCE--EEEecccCCCcccccccccccccccccccceeccCCcccccccccc
Confidence 468999999999887755 7778888754310 00000000001122234556665543 344433 345567777653
Q ss_pred CCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe--ccCCcce
Q psy15549 160 TDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL--TEHKKFV 237 (621)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~v 237 (621)
.. .. ...-.........+++.++|.++++....+.+.+++. +++.+..+ ..+....
T Consensus 102 g~-~~--------------------~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~ 159 (279)
T d1q7fa_ 102 GQ-FV--------------------RKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFP 159 (279)
T ss_dssp SC-EE--------------------EEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSE
T ss_pred cc-ce--------------------eecCCCcccccceeccccCCcEEEEeeccceeeEecc-CCceeeccccccccccc
Confidence 22 11 1111234456789999999998888887888888885 56666665 3455677
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEec
Q psy15549 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317 (621)
Q Consensus 238 ~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~ 317 (621)
..+++.++++.+++....+.|++||.. ++.+..+... ........+++.++|+.+++-
T Consensus 160 ~~i~~d~~g~i~v~d~~~~~V~~~d~~-G~~~~~~g~~---------------------g~~~~P~giavD~~G~i~Vad 217 (279)
T d1q7fa_ 160 NGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGE---------------------GITNYPIGVGINSNGEILIAD 217 (279)
T ss_dssp EEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCT---------------------TTSCSEEEEEECTTCCEEEEE
T ss_pred ceeeeccceeEEeeeccccceeeeecC-Cceeeeeccc---------------------ccccCCcccccccCCeEEEEE
Confidence 889999999888888888999999974 4544444210 111223678888888765542
Q ss_pred cccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEe
Q psy15549 318 SGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYD 397 (621)
Q Consensus 318 s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 397 (621)
.. .++.|.+|+
T Consensus 218 ~~---------------------------------------------------------------------~~~~v~~f~ 228 (279)
T d1q7fa_ 218 NH---------------------------------------------------------------------NNFNLTIFT 228 (279)
T ss_dssp CS---------------------------------------------------------------------SSCEEEEEC
T ss_pred CC---------------------------------------------------------------------CCcEEEEEC
Confidence 20 123455555
Q ss_pred CCCCceeEEEec-ccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCC
Q psy15549 398 TQHASPFAFIAN-IHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDN 444 (621)
Q Consensus 398 ~~~~~~~~~~~~-~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~ 444 (621)
.+++.+..+.. ........|++.|||.++ +++.++.|++|.+...
T Consensus 229 -~~G~~~~~~~~~~~~~~p~~vav~~dG~l~-V~~~n~~v~~fr~~~~ 274 (279)
T d1q7fa_ 229 -QDGQLISALESKVKHAQCFDVALMDDGSVV-LASKDYRLYIYRYVQL 274 (279)
T ss_dssp -TTSCEEEEEEESSCCSCEEEEEEETTTEEE-EEETTTEEEEEECSCC
T ss_pred -CCCCEEEEEeCCCCCCCEeEEEEeCCCcEE-EEeCCCeEEEEEeeee
Confidence 23444444422 223457899999999754 4567899999998754
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.96 E-value=8.8e-08 Score=89.76 Aligned_cols=238 Identities=10% Similarity=0.016 Sum_probs=148.2
Q ss_pred CCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 93 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg 93 (621)
..+..++++|||+ ++++...++.|. .|+..... . .+......+.+++|++||
T Consensus 28 ~~~e~iAv~pdG~-----l~vt~~~~~~I~--------------~i~p~g~~--~-------~~~~~~~~~~gla~~~dG 79 (302)
T d2p4oa1 28 TFLENLASAPDGT-----IFVTNHEVGEIV--------------SITPDGNQ--Q-------IHATVEGKVSGLAFTSNG 79 (302)
T ss_dssp CCEEEEEECTTSC-----EEEEETTTTEEE--------------EECTTCCE--E-------EEEECSSEEEEEEECTTS
T ss_pred CCcCCEEECCCCC-----EEEEeCCCCEEE--------------EEeCCCCE--E-------EEEcCCCCcceEEEcCCC
Confidence 3688999999998 999999899877 55533221 1 133455679999999999
Q ss_pred CEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCCc
Q psy15549 94 ELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNL 172 (621)
Q Consensus 94 ~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 172 (621)
+++++.. ++.+.+|+........ ..+.. .......+.+++.++++++++.+.++.+..++...+.........
T Consensus 80 ~l~v~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~-- 153 (302)
T d2p4oa1 80 DLVATGWNADSIPVVSLVKSDGTV---ETLLT-LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHP-- 153 (302)
T ss_dssp CEEEEEECTTSCEEEEEECTTSCE---EEEEE-CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECG--
T ss_pred CeEEEecCCceEEEEEecccccce---eeccc-cCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCC--
Confidence 9888876 6777777776543211 11111 123456789999999999888888888888887655321000000
Q ss_pred ccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEe--ccCCcceEEEEEcCCCCEEE
Q psy15549 173 DEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL--TEHKKFVQGVAWDPKNQYVA 250 (621)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~v~~l~~sp~~~~l~ 250 (621)
................+.+.. +.++++.+..+.|..+++......... .........++++++|++++
T Consensus 154 ---------~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~v 223 (302)
T d2p4oa1 154 ---------MLARSNSESVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYG 223 (302)
T ss_dssp ---------GGSCSSTTCCSCSEEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEE
T ss_pred ---------ccceeeccCcccccccccccC-CceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEE
Confidence 000001112233456676653 335555666888988887654322111 11233456799999999888
Q ss_pred EEeCCCcEEEEEccCcee-eeecccCCCCCCCccccccccccccccCCcccceeeeee---cCCCCeEEecc
Q psy15549 251 TLSSDRSLRTYSIQSKKV-ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF---SPDGQLLIAPS 318 (621)
Q Consensus 251 s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---spdg~~l~~~s 318 (621)
+...++.|..++...... +.... ..-...++++| ++|++.|++++
T Consensus 224 a~~~~~~V~~i~p~G~~~~~~~~~-----------------------~~~~~pt~vafg~~~~D~~~Lyvtt 272 (302)
T d2p4oa1 224 ATHIYNSVVRIAPDRSTTIIAQAE-----------------------QGVIGSTAVAFGQTEGDCTAIYVVT 272 (302)
T ss_dssp ECBTTCCEEEECTTCCEEEEECGG-----------------------GTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred EEcCCCcEEEECCCCCEEEEEecC-----------------------CCCCCceEEEEcCCCCCCCEEEEEC
Confidence 777889999998754322 11111 11123478999 67888887665
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.93 E-value=1.9e-07 Score=87.64 Aligned_cols=249 Identities=10% Similarity=0.050 Sum_probs=137.6
Q ss_pred CeEEEEECCCCCEEEEEeC-------CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCC
Q psy15549 131 AVNVVRFSPNGELLASGDD-------ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT 203 (621)
Q Consensus 131 ~V~~i~~sp~g~~l~s~s~-------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd 203 (621)
..-.++|.++|+++++... +|+|..||..++...... .............++|.++
T Consensus 19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~-----------------~~~~~~~~g~P~Gl~~~~d 81 (314)
T d1pjxa_ 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC-----------------KPEVNGYGGIPAGCQCDRD 81 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEE-----------------CCEETTEECCEEEEEECSS
T ss_pred CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEE-----------------CCccccCCCcceeEEEeCC
Confidence 3556899999997776432 467888888776531000 0001112234678999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEeccCCc----ceEEEEEcCCCCEEEEEeC---------------CCcEEEEEcc
Q psy15549 204 STHLISGSVDNTAIMWDVHKGKNLGILTEHKK----FVQGVAWDPKNQYVATLSS---------------DRSLRTYSIQ 264 (621)
Q Consensus 204 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~----~v~~l~~sp~~~~l~s~~~---------------dg~i~iwd~~ 264 (621)
++.|+++...+.|..++...+..........+ ....+++.++|++.++-.. .|.|..++..
T Consensus 82 g~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d 161 (314)
T d1pjxa_ 82 ANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp SSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred CCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec
Confidence 99888888878899999765432221111111 2567899999987775422 1223333321
Q ss_pred CceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCC----eEEeccccccCCCCCCcceeeeeeeeec
Q psy15549 265 SKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ----LLIAPSGCLENSDSTRKPISVTHVFTRA 340 (621)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~----~l~~~s~~~~~~d~~i~~~~~~~~~~~~ 340 (621)
++...... .-..-+.++|+|++. +|+++.. ..+.+..+++...-...
T Consensus 162 -g~~~~~~~------------------------~~~~pNGi~~~~d~d~~~~~lyv~d~----~~~~i~~~d~~~~g~~~ 212 (314)
T d1pjxa_ 162 -GQMIQVDT------------------------AFQFPNGIAVRHMNDGRPYQLIVAET----PTKKLWSYDIKGPAKIE 212 (314)
T ss_dssp -SCEEEEEE------------------------EESSEEEEEEEECTTSCEEEEEEEET----TTTEEEEEEEEETTEEE
T ss_pred -CceeEeeC------------------------CcceeeeeEECCCCCcceeEEEEEee----cccceEEeeccCccccc
Confidence 22111110 001125789988765 4544321 34444444432110000
Q ss_pred ccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEE
Q psy15549 341 CLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITW 420 (621)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~ 420 (621)
. ......+..... ..|.- .++..+|+..++....+.|++||...+..+..+.. ....+++++|
T Consensus 213 ~-~~~~~~~~~~~~------~~pdG---------iavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~-p~~~~t~~af 275 (314)
T d1pjxa_ 213 N-KKVWGHIPGTHE------GGADG---------MDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC-PFEKPSNLHF 275 (314)
T ss_dssp E-EEEEEECCCCSS------CEEEE---------EEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC-SSSCEEEEEE
T ss_pred e-eeEEEEcccccc------cccee---------eEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEEC-CCCCEEEEEE
Confidence 0 000000000000 00111 12233567777777889999999998887776643 4567899999
Q ss_pred cCCCCe-EEEEeCCCcEEEEEec
Q psy15549 421 SSDGKV-LIASSTDGYCSIISFG 442 (621)
Q Consensus 421 spdg~~-l~s~s~dg~i~iw~~~ 442 (621)
.||++. ++|.+.+|.|..+++.
T Consensus 276 g~d~~~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 276 KPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp CTTSSEEEEEETTTTEEEEEECS
T ss_pred eCCCCEEEEEECCCCcEEEEECC
Confidence 999974 4566677877777765
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.92 E-value=7e-07 Score=82.30 Aligned_cols=241 Identities=13% Similarity=0.139 Sum_probs=148.8
Q ss_pred eEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC-CC
Q psy15549 16 VLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN-GE 94 (621)
Q Consensus 16 v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd-g~ 94 (621)
-..|+++++++ .+++-..++.|++||.+..- ++.+.+... -.+....-..+++..+ +.
T Consensus 25 P~gvavd~dg~-----i~VaD~~n~rI~v~d~~G~~------~~~~~~~~~----------~~~~~~~p~~~~~~~~~~~ 83 (279)
T d1q7fa_ 25 PSGVAVNAQND-----IIVADTNNHRIQIFDKEGRF------KFQFGECGK----------RDSQLLYPNRVAVVRNSGD 83 (279)
T ss_dssp EEEEEECTTCC-----EEEEEGGGTEEEEECTTSCE------EEEECCBSS----------STTCBSSEEEEEEETTTTE
T ss_pred ccEEEEcCCCC-----EEEEECCCCEEEEEeCCCCE------EEEecccCC----------Ccccccccccccccccccc
Confidence 57899999997 88887778889844422110 222211100 1112223445555554 44
Q ss_pred EEEEEc--CCceEEEEeccCccccccceecccc-cccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCCCCCCCC
Q psy15549 95 LLASGD--DVGKEIWYLTERESGIANVEFASDL-SRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN 171 (621)
Q Consensus 95 ~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 171 (621)
++++.. ++.|.+++... .....+ .........+++.++|.++++....+.+.+++.... .+..
T Consensus 84 ~~~~~~~~~~~i~~~~~~g--------~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~-~~~~----- 149 (279)
T d1q7fa_ 84 IIVTERSPTHQIQIYNQYG--------QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VLHK----- 149 (279)
T ss_dssp EEEEECGGGCEEEEECTTS--------CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEE-----
T ss_pred cceeccCCccccccccccc--------cceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCc-eeec-----
Confidence 454443 33444444322 222222 223456778999999998888777778888875432 2110
Q ss_pred cccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEec--cCCcceEEEEEcCCCCEE
Q psy15549 172 LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT--EHKKFVQGVAWDPKNQYV 249 (621)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~~l~~sp~~~~l 249 (621)
.....+......+++.++++.+++....+.|++||. +++.+.++. +.......+++.++|+.+
T Consensus 150 --------------~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~ 214 (279)
T d1q7fa_ 150 --------------FGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEIL 214 (279)
T ss_dssp --------------EECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEE
T ss_pred --------------ccccccccccceeeeccceeEEeeeccccceeeeec-CCceeeeecccccccCCcccccccCCeEE
Confidence 112345667889999999998888888899999996 577777763 344567899999999977
Q ss_pred EEEeC-CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCC
Q psy15549 250 ATLSS-DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTR 328 (621)
Q Consensus 250 ~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i 328 (621)
++-.. ++.|.+|+. +++.+..+.... .......+++.+||.+++ +. .+..+
T Consensus 215 Vad~~~~~~v~~f~~-~G~~~~~~~~~~---------------------~~~~p~~vav~~dG~l~V-~~-----~n~~v 266 (279)
T d1q7fa_ 215 IADNHNNFNLTIFTQ-DGQLISALESKV---------------------KHAQCFDVALMDDGSVVL-AS-----KDYRL 266 (279)
T ss_dssp EEECSSSCEEEEECT-TSCEEEEEEESS---------------------CCSCEEEEEEETTTEEEE-EE-----TTTEE
T ss_pred EEECCCCcEEEEECC-CCCEEEEEeCCC---------------------CCCCEeEEEEeCCCcEEE-Ee-----CCCeE
Confidence 76544 456999984 566665543211 011347899999997554 44 56777
Q ss_pred cceeee
Q psy15549 329 KPISVT 334 (621)
Q Consensus 329 ~~~~~~ 334 (621)
++|...
T Consensus 267 ~~fr~~ 272 (279)
T d1q7fa_ 267 YIYRYV 272 (279)
T ss_dssp EEEECS
T ss_pred EEEEee
Confidence 777654
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.90 E-value=5.3e-07 Score=84.54 Aligned_cols=236 Identities=10% Similarity=0.093 Sum_probs=134.7
Q ss_pred CCCCeEEEeccccccCCcceEEEEecC-------CceEEeeeccCccccccceeEEeccccccccceeeccccccccCcE
Q psy15549 12 NRDPVLSVDIQLKQEKDNCYRIVTGGA-------DSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAV 84 (621)
Q Consensus 12 h~~~v~~l~~spd~~~~~~~~l~tg~~-------dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V 84 (621)
.-.....++|.|+|. ++++... +|.|. .||..++..... .........+.-
T Consensus 16 ~~~g~EGpa~d~dG~-----ly~~~~~~~~~~~~~g~I~--------------r~d~~~~~~~~~---~~~~~~~~~g~P 73 (314)
T d1pjxa_ 16 DIPGAEGPVFDKNGD-----FYIVAPEVEVNGKPAGEIL--------------RIDLKTGKKTVI---CKPEVNGYGGIP 73 (314)
T ss_dssp CCTTCEEEEECTTSC-----EEEEETTCEETTEECCEEE--------------EECTTTCCEEEE---ECCEETTEECCE
T ss_pred CCCCCeEeEEeCCCC-----EEEEECccccccccCCEEE--------------EEECCCCcEEEE---ECCccccCCCcc
Confidence 334578899999997 6655433 34565 555444332111 000111122346
Q ss_pred EEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecc-cccccC-CCeEEEEECCCCCEEEEEeCC-----------
Q psy15549 85 NVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFAS-DLSRHQ-KAVNVVRFSPNGELLASGDDE----------- 150 (621)
Q Consensus 85 ~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~-~~~~h~-~~V~~i~~sp~g~~l~s~s~d----------- 150 (621)
..++|.++|..|+++. .+++..++...... .... ...+.. ...+.+++.++|++.++-...
T Consensus 74 ~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~-----~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~ 148 (314)
T d1pjxa_ 74 AGCQCDRDANQLFVADMRLGLLVVQTDGTFE-----EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp EEEEECSSSSEEEEEETTTEEEEEETTSCEE-----ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTT
T ss_pred eeEEEeCCCCEEEEEECCCeEEEEeCCCcEE-----EEEeccccccccCCCcEEEECCCCCEEEecCccCccccccccee
Confidence 7899999998777765 66677777654321 1111 111111 135779999999877764221
Q ss_pred --CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCC-----EEEEEeCCCeEEEEECCC
Q psy15549 151 --STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST-----HLISGSVDNTAIMWDVHK 223 (621)
Q Consensus 151 --g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~-----~l~s~~~dg~i~vwd~~~ 223 (621)
..=+||.+...... ..+...-...+.++|+|++. ++++-+..+.|..|++..
T Consensus 149 ~~~~G~v~~~~~dg~~---------------------~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~ 207 (314)
T d1pjxa_ 149 QEKFGSIYCFTTDGQM---------------------IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKG 207 (314)
T ss_dssp SSSCEEEEEECTTSCE---------------------EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEE
T ss_pred ccCCceEEEEeecCce---------------------eEeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccC
Confidence 01122322211110 11112223356789988764 444456678899998764
Q ss_pred CcEEE------Eecc-CCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccC
Q psy15549 224 GKNLG------ILTE-HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDD 296 (621)
Q Consensus 224 ~~~~~------~~~~-~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (621)
...+. .+.. +....-.+++..+|++.++....+.|.+||...+..+..+...
T Consensus 208 ~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p--------------------- 266 (314)
T d1pjxa_ 208 PAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP--------------------- 266 (314)
T ss_dssp TTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS---------------------
T ss_pred ccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECC---------------------
Confidence 33222 2211 2234568999999998887777899999998877655444211
Q ss_pred CcccceeeeeecCCCCeEEecc
Q psy15549 297 TMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 297 ~~~~~i~~~~~spdg~~l~~~s 318 (621)
....++++|.||++.|++..
T Consensus 267 --~~~~t~~afg~d~~~lyVt~ 286 (314)
T d1pjxa_ 267 --FEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp --SSCEEEEEECTTSSEEEEEE
T ss_pred --CCCEEEEEEeCCCCEEEEEE
Confidence 12347899999998666554
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=5.8e-07 Score=89.26 Aligned_cols=212 Identities=9% Similarity=0.046 Sum_probs=111.9
Q ss_pred CeEEEeccccccCCcceEEEEec---------CCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEE
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGG---------ADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVN 85 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~---------~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 85 (621)
.+....||||++ +|+... ..+.+. ++|+.++.... +.........+.
T Consensus 62 ~~~~~~~SpD~~-----~vl~~~~~~~~~r~s~~~~~~--------------i~d~~~~~~~~-----l~~~~~~~~~l~ 117 (465)
T d1xfda1 62 RAIRYEISPDRE-----YALFSYNVEPIYQHSYTGYYV--------------LSKIPHGDPQS-----LDPPEVSNAKLQ 117 (465)
T ss_dssp TCSEEEECTTSS-----EEEEEESCCCCSSSCCCSEEE--------------EEESSSCCCEE-----CCCTTCCSCCCS
T ss_pred ccceeEECCCCC-----eEEEEEcccceeEeeccccEE--------------EEEccCCceee-----ccCccCCccccc
Confidence 567788999998 766653 234455 77777664321 111223344566
Q ss_pred EEEEccCCCEEEEEcCCceEEEEeccCccccccc--eecccccccC---------CCeEEEEECCCCCEEEEEeC-CCcE
Q psy15549 86 VVRFSPNGELLASGDDVGKEIWYLTERESGIANV--EFASDLSRHQ---------KAVNVVRFSPNGELLASGDD-ESTI 153 (621)
Q Consensus 86 ~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~--~~~~~~~~h~---------~~V~~i~~sp~g~~l~s~s~-dg~i 153 (621)
...|||||+.||...++.+.+.+...+....... ..-..+.+.. +.-.++.|||||++||.... +..|
T Consensus 118 ~~~wSPDG~~iafv~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V 197 (465)
T d1xfda1 118 YAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRV 197 (465)
T ss_dssp BCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTS
T ss_pred eeeeccCCceEEEEecceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEeccccc
Confidence 7889999999999988887777665442100000 0000011111 11246789999999998763 3455
Q ss_pred EEEEccCCC--CCCCC-----CCCCcccc-------cc--cccceeee--eeecCCCCCeEEEEECCCCCEEEEEeC-C-
Q psy15549 154 IVWKQKTDQ--DLPEF-----PSSNLDEE-------NV--NKEHWIVT--KILRGHLEDVYDISWSPTSTHLISGSV-D- 213 (621)
Q Consensus 154 ~vwd~~~~~--~~~~~-----~~~~~~~~-------~~--~~~~~~~~--~~~~~~~~~v~~i~~spd~~~l~s~~~-d- 213 (621)
..+.+.... ..... +....... .. ....+... .........+..+.|++++++++.... +
T Consensus 198 ~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q 277 (465)
T d1xfda1 198 PIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQ 277 (465)
T ss_dssp CEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTS
T ss_pred ceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEcccc
Confidence 555543211 10000 00000000 00 00000000 001112224678899999986665433 2
Q ss_pred --CeEEEEECCCCcEEEEeccCC-cce----EEEEEcCCCCEEE
Q psy15549 214 --NTAIMWDVHKGKNLGILTEHK-KFV----QGVAWDPKNQYVA 250 (621)
Q Consensus 214 --g~i~vwd~~~~~~~~~~~~~~-~~v----~~l~~sp~~~~l~ 250 (621)
..|.++|..++++...+.... +.| ....|+|+|+.++
T Consensus 278 ~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~ 321 (465)
T d1xfda1 278 NVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFF 321 (465)
T ss_dssp CEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEE
T ss_pred ccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeE
Confidence 368889999998765553321 211 3467899998543
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.86 E-value=1.7e-06 Score=81.33 Aligned_cols=235 Identities=9% Similarity=0.049 Sum_probs=142.7
Q ss_pred CeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCC
Q psy15549 15 PVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE 94 (621)
Q Consensus 15 ~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~ 94 (621)
.+..++|.++|. ++++-...+.|. .|+......... +.........++|++||+
T Consensus 41 ~lEG~~~D~~G~-----Ly~~D~~~g~I~--------------ri~p~g~~~~~~-------~~~~~~~p~gla~~~dG~ 94 (319)
T d2dg1a1 41 QLEGLNFDRQGQ-----LFLLDVFEGNIF--------------KINPETKEIKRP-------FVSHKANPAAIKIHKDGR 94 (319)
T ss_dssp CEEEEEECTTSC-----EEEEETTTCEEE--------------EECTTTCCEEEE-------EECSSSSEEEEEECTTSC
T ss_pred CcEeCEECCCCC-----EEEEECCCCEEE--------------EEECCCCeEEEE-------EeCCCCCeeEEEECCCCC
Confidence 457899999997 777877888887 666554432111 233445678999999999
Q ss_pred EEEEEc---CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC------CcEEEEEccCCCCCC
Q psy15549 95 LLASGD---DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE------STIIVWKQKTDQDLP 165 (621)
Q Consensus 95 ~las~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d------g~i~vwd~~~~~~~~ 165 (621)
++++.. .....++.+....... .....-..-......+++.++|++.++.... +.+..++......
T Consensus 95 l~va~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~-- 169 (319)
T d2dg1a1 95 LFVCYLGDFKSTGGIFAATENGDNL---QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-- 169 (319)
T ss_dssp EEEEECTTSSSCCEEEEECTTSCSC---EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE--
T ss_pred EEEEecCCCccceeEEEEcCCCcee---eeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEeccccee--
Confidence 888754 2234555554433211 1111111112357789999999876664321 2244444332221
Q ss_pred CCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCC-cEEEE-------eccCCcc
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVHKG-KNLGI-------LTEHKKF 236 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~~~-~~~~~-------~~~~~~~ 236 (621)
..+...-...+.++|+||++.|+.+ +..+.|..|++... ..... .......
T Consensus 170 --------------------~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~ 229 (319)
T d2dg1a1 170 --------------------TPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEG 229 (319)
T ss_dssp --------------------EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSE
T ss_pred --------------------EEEeeccceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccc
Confidence 1112223346789999999876554 55789999998642 11111 1112233
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEe
Q psy15549 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316 (621)
Q Consensus 237 v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~ 316 (621)
.-.+++.++|++.++....+.|.+||. .++.+..+.....+ ......+++++|.+++..+++
T Consensus 230 PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~-----------------~~~~~~~~~~~~~~~~~~~~~ 291 (319)
T d2dg1a1 230 PDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRD-----------------EGHMLRSTHPQFIPGTNQLII 291 (319)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGG-----------------GTCSCBCCEEEECTTSCEEEE
T ss_pred eeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcC-----------------CCcCceeeeEEEeCCCCEEEE
Confidence 568999999998888888999999995 67777766432111 112234578999998877766
Q ss_pred cc
Q psy15549 317 PS 318 (621)
Q Consensus 317 ~s 318 (621)
.+
T Consensus 292 t~ 293 (319)
T d2dg1a1 292 CS 293 (319)
T ss_dssp EE
T ss_pred Ec
Confidence 55
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.80 E-value=5.7e-06 Score=77.58 Aligned_cols=158 Identities=8% Similarity=0.068 Sum_probs=93.1
Q ss_pred cCcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC----CcEEE
Q psy15549 81 QKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE----STIIV 155 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d----g~i~v 155 (621)
...+-.++|.++|++.++-. .+.|..|+.... .....+.........++++++|+++++...+ +.+..
T Consensus 39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~-------~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~ 111 (319)
T d2dg1a1 39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK-------EIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 111 (319)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTC-------CEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred CcCcEeCEECCCCCEEEEECCCCEEEEEECCCC-------eEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEE
Confidence 33456899999999666654 555666655443 2222233344567899999999877765432 23444
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC------CCeEEEEECCCCcEEEE
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV------DNTAIMWDVHKGKNLGI 229 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~------dg~i~vwd~~~~~~~~~ 229 (621)
.+........ ......-...+..+++.++|++.++... .+.+..++...+ .+..
T Consensus 112 ~~~~~~~~~~-------------------~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~-~~~~ 171 (319)
T d2dg1a1 112 ATENGDNLQD-------------------IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR-TVTP 171 (319)
T ss_dssp ECTTSCSCEE-------------------EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC-CEEE
T ss_pred EcCCCceeee-------------------eccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccc-eeEE
Confidence 4444333210 0000112345788999999987665432 233555554333 3333
Q ss_pred eccCCcceEEEEEcCCCCEEEEE-eCCCcEEEEEccC
Q psy15549 230 LTEHKKFVQGVAWDPKNQYVATL-SSDRSLRTYSIQS 265 (621)
Q Consensus 230 ~~~~~~~v~~l~~sp~~~~l~s~-~~dg~i~iwd~~~ 265 (621)
+...-.....++|+|+++.|+.+ +..+.|..|++..
T Consensus 172 ~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~ 208 (319)
T d2dg1a1 172 IIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 208 (319)
T ss_dssp EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EeeccceeeeeeeccccceEEEecccCCceEEEEEcC
Confidence 32233345789999999877655 4578899998754
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.70 E-value=1.3e-06 Score=80.36 Aligned_cols=110 Identities=10% Similarity=0.159 Sum_probs=74.5
Q ss_pred EECCC--CCEEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeC-
Q psy15549 136 RFSPN--GELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSV- 212 (621)
Q Consensus 136 ~~sp~--g~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~- 212 (621)
..+|+ |+.+|..+ ++.|.+.|+.+++. ..+..+...+...+|||||+.||....
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~----------------------~~Lt~~~~~~~~p~~SPDG~~iaf~~~~ 61 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGST----------------------RKIVSNLGVINNARFFPDGRKIAIRVMR 61 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETTTCCE----------------------EEEECSSSEEEEEEECTTSSEEEEEEEE
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECCCCCE----------------------EEEecCCCcccCEEECCCCCEEEEEEee
Confidence 35788 99888765 45688889988763 456667778899999999999986543
Q ss_pred C-----CeEEEEECCCCcEEEEecc------CCcceEEEEEcCCCCEEEEEeCC------CcEEEEEccCcee
Q psy15549 213 D-----NTAIMWDVHKGKNLGILTE------HKKFVQGVAWDPKNQYVATLSSD------RSLRTYSIQSKKV 268 (621)
Q Consensus 213 d-----g~i~vwd~~~~~~~~~~~~------~~~~v~~l~~sp~~~~l~s~~~d------g~i~iwd~~~~~~ 268 (621)
+ ..|.++++.+++....... .........|+|+|+.|+..... ..+...+...+..
T Consensus 62 ~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (281)
T d1k32a2 62 GSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINF 134 (281)
T ss_dssp STTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEE
T ss_pred CCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCcee
Confidence 2 2478888877765443221 12245678899999998875432 2344555554443
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.34 E-value=3e-05 Score=70.80 Aligned_cols=102 Identities=18% Similarity=0.335 Sum_probs=59.4
Q ss_pred Eecccc--ccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccCCCEE
Q psy15549 19 VDIQLK--QEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL 96 (621)
Q Consensus 19 l~~spd--~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~l 96 (621)
+..||| |+ ++|..+. |.|. +.++..++.. .+..+.+.+...+|||||+.|
T Consensus 4 ~~~sPdi~G~-----~v~f~~~-~dl~--------------~~d~~~g~~~--------~Lt~~~~~~~~p~~SPDG~~i 55 (281)
T d1k32a2 4 LLLNPDIHGD-----RIIFVCC-DDLW--------------EHDLKSGSTR--------KIVSNLGVINNARFFPDGRKI 55 (281)
T ss_dssp CCEEEEEETT-----EEEEEET-TEEE--------------EEETTTCCEE--------EEECSSSEEEEEEECTTSSEE
T ss_pred cccCCCCCCC-----EEEEEeC-CcEE--------------EEECCCCCEE--------EEecCCCcccCEEECCCCCEE
Confidence 346899 87 6665543 3444 6677665432 256677788999999999999
Q ss_pred EEEc--CC---ceEEEEeccCccccccceecc-cccccCCCeEEEEECCCCCEEEEEe
Q psy15549 97 ASGD--DV---GKEIWYLTERESGIANVEFAS-DLSRHQKAVNVVRFSPNGELLASGD 148 (621)
Q Consensus 97 as~~--d~---~v~iw~~~~~~~~~~~~~~~~-~~~~h~~~V~~i~~sp~g~~l~s~s 148 (621)
|... ++ ...||-+.........+.... .............|+|+|+.|+...
T Consensus 56 af~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 113 (281)
T d1k32a2 56 AIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTD 113 (281)
T ss_dssp EEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred EEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEEE
Confidence 9754 22 234555443332111111000 0011223456789999999888754
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.29 E-value=0.00036 Score=63.97 Aligned_cols=186 Identities=15% Similarity=0.077 Sum_probs=120.5
Q ss_pred cCcEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccc--cCCCeEEEEECCCCCEEEEEeC----CCcEE
Q psy15549 81 QKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSR--HQKAVNVVRFSPNGELLASGDD----ESTII 154 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~--h~~~V~~i~~sp~g~~l~s~s~----dg~i~ 154 (621)
...+.++++.++|.+++++ .+++.+++...+.. ..+..... ....++.+.+.|+|++.++... .+.-.
T Consensus 58 ~~~~~~i~~~~dg~l~va~-~~gl~~~d~~tg~~-----~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~ 131 (295)
T d2ghsa1 58 PFMGSALAKISDSKQLIAS-DDGLFLRDTATGVL-----TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGS 131 (295)
T ss_dssp SSCEEEEEEEETTEEEEEE-TTEEEEEETTTCCE-----EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEE
T ss_pred CCCcEEEEEecCCCEEEEE-eCccEEeeccccee-----eEEeeeecCCCcccceeeEECCCCCEEEEecccccccccee
Confidence 3568899999999887765 56788998877632 22222211 1235788999999987666432 23445
Q ss_pred EEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCC------c--
Q psy15549 155 VWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVHKG------K-- 225 (621)
Q Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~~~------~-- 225 (621)
+|.+..++. ..+...-.....++|+++++.++.+ +..+.|..|++... +
T Consensus 132 l~~~~~g~~----------------------~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~ 189 (295)
T d2ghsa1 132 IYHVAKGKV----------------------TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAE 189 (295)
T ss_dssp EEEEETTEE----------------------EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCE
T ss_pred EeeecCCcE----------------------EEEeeccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceE
Confidence 666555432 1122223346789999999866554 45788999987421 1
Q ss_pred EEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeee
Q psy15549 226 NLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL 305 (621)
Q Consensus 226 ~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 305 (621)
....+....+....+++..+|++.++.-..+.|..||. .++.+..+... ...++++
T Consensus 190 ~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP-----------------------~~~~T~~ 245 (295)
T d2ghsa1 190 VFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVP-----------------------GKQTTCP 245 (295)
T ss_dssp EEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECS-----------------------CSBEEEE
T ss_pred EEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCC-----------------------CCceEEE
Confidence 11223344556788999999998777667888999995 67777666421 1235889
Q ss_pred eec-CCCCeEEecc
Q psy15549 306 TFS-PDGQLLIAPS 318 (621)
Q Consensus 306 ~~s-pdg~~l~~~s 318 (621)
+|- +|.+.|++.+
T Consensus 246 ~FGG~d~~~LyvTt 259 (295)
T d2ghsa1 246 AFIGPDASRLLVTS 259 (295)
T ss_dssp EEESTTSCEEEEEE
T ss_pred EEeCCCCCEEEEEE
Confidence 996 6777777655
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.24 E-value=0.00034 Score=64.08 Aligned_cols=196 Identities=12% Similarity=0.061 Sum_probs=123.7
Q ss_pred ecCCCCeEEEeccccccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccceeeccccc--cccCcEEEE
Q psy15549 10 WHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLS--RHQKAVNVV 87 (621)
Q Consensus 10 ~~h~~~v~~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~--~h~~~V~~l 87 (621)
+.....+.++++.+++. +++ ++.+| +. ++|..+++... ..... .....++.+
T Consensus 55 ~~~~~~~~~i~~~~dg~-----l~v-a~~~g-l~--------------~~d~~tg~~~~-----l~~~~~~~~~~~~nd~ 108 (295)
T d2ghsa1 55 HALPFMGSALAKISDSK-----QLI-ASDDG-LF--------------LRDTATGVLTL-----HAELESDLPGNRSNDG 108 (295)
T ss_dssp EECSSCEEEEEEEETTE-----EEE-EETTE-EE--------------EEETTTCCEEE-----EECSSTTCTTEEEEEE
T ss_pred EECCCCcEEEEEecCCC-----EEE-EEeCc-cE--------------EeecccceeeE-----EeeeecCCCcccceee
Confidence 33456789999999985 554 45566 44 56655543211 11111 112368899
Q ss_pred EEccCCCEEEEEc-----CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEE-EEeCCCcEEEEEccCC
Q psy15549 88 RFSPNGELLASGD-----DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLA-SGDDESTIIVWKQKTD 161 (621)
Q Consensus 88 ~~spdg~~las~~-----d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~-s~s~dg~i~vwd~~~~ 161 (621)
.+.|+|++.++.. .+.-.+|.+..+ ...... ..-...+.++|+++++.++ +-+..+.|..++++..
T Consensus 109 ~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g-------~~~~~~-~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~ 180 (295)
T d2ghsa1 109 RMHPSGALWIGTMGRKAETGAGSIYHVAKG-------KVTKLF-ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDAR 180 (295)
T ss_dssp EECTTSCEEEEEEETTCCTTCEEEEEEETT-------EEEEEE-EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTT
T ss_pred EECCCCCEEEEeccccccccceeEeeecCC-------cEEEEe-eccCCcceeeecCCCceEEEeecccceeeEeeeccc
Confidence 9999999877754 123467777654 222212 2233467899999998655 4556778988887643
Q ss_pred CCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCcceEEEE
Q psy15549 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 241 (621)
.....- .........+.......+++..+|++.++.-..+.|..||. +|+.+..+......+++++
T Consensus 181 ~~~~~~-------------~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~ 246 (295)
T d2ghsa1 181 TGLPTG-------------KAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPA 246 (295)
T ss_dssp TCCBSS-------------CCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEE
T ss_pred cccccc-------------ceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCCceEEEE
Confidence 321100 00011223344556788999999998887777889999995 6888888876666799999
Q ss_pred Ec-CCCCEEEEEe
Q psy15549 242 WD-PKNQYVATLS 253 (621)
Q Consensus 242 ~s-p~~~~l~s~~ 253 (621)
|- |+.+.|+..+
T Consensus 247 FGG~d~~~LyvTt 259 (295)
T d2ghsa1 247 FIGPDASRLLVTS 259 (295)
T ss_dssp EESTTSCEEEEEE
T ss_pred EeCCCCCEEEEEE
Confidence 96 6766665443
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.07 E-value=5e-05 Score=70.93 Aligned_cols=212 Identities=9% Similarity=0.107 Sum_probs=121.4
Q ss_pred ccCCcceEEEEecCCceEEeeeccCccccccceeEEeccccccccce---------------eecc-----cc-ccccCc
Q psy15549 25 QEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANV---------------EFAS-----DL-SRHQKA 83 (621)
Q Consensus 25 ~~~~~~~~l~tg~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~---------------~~~~-----~~-~~h~~~ 83 (621)
|+.|.++.+.+|+..|.|+||=+.+.+.+..|-++.......--..- +++. .+ .+...-
T Consensus 8 G~~Deyy~f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HH 87 (459)
T d1fwxa2 8 GQLDDYYGFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHH 87 (459)
T ss_dssp TCCCSEEEEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCC
T ss_pred CCcccEEEEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCC
Confidence 44577788999999999999999999888877777664322100000 0000 00 011111
Q ss_pred EEEEEEcc---CCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECC--CCCEEEEEeCCC-----
Q psy15549 84 VNVVRFSP---NGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP--NGELLASGDDES----- 151 (621)
Q Consensus 84 V~~l~~sp---dg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp--~g~~l~s~s~dg----- 151 (621)
. .+.+.. ||++|.... +..|.+.|+...+. ..+..+ .-...+..++..+ +-.|++..+.+.
T Consensus 88 P-~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt-----~kIi~i-Pn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pn 160 (459)
T d1fwxa2 88 V-HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKC-----DAILEI-PNAKGIHGLRPQKWPRSNYVFCNGEDETPLVN 160 (459)
T ss_dssp E-EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEE-----EEEEEC-SSCCSEEEEEECCSSBCSEEEEEECSCEESSC
T ss_pred C-cccccCCccceeEEEEEcCCCceEEEEECcceee-----eEEEec-CCCCCCceeecccCCCeEEEEccCccccccCC
Confidence 1 445543 899999987 66688888876521 111122 1233456666654 455777776532
Q ss_pred -------------cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCC----
Q psy15549 152 -------------TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDN---- 214 (621)
Q Consensus 152 -------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg---- 214 (621)
.+.++|..+.+.. | +.. -......+.++++|+++++.+.+.
T Consensus 161 dg~~l~d~~~y~~~~t~ID~~tm~V~-----------------~---QV~--V~g~ld~~~~s~dGK~af~TsyNSE~g~ 218 (459)
T d1fwxa2 161 DGTNMEDVANYVNVFTAVDADKWEVA-----------------W---QVL--VSGNLDNCDADYEGKWAFSTSYNSEKGM 218 (459)
T ss_dssp SSSSTTCGG-EEEEEEEEETTTTEEE-----------------E---EEE--ESSCCCCEEECSSSSEEEEEESCTTCCS
T ss_pred CCccccchhhcceEEEEEecCCceEE-----------------E---Eee--eCCChhccccCCCCCEEEEEeccccCCc
Confidence 2445565554422 1 111 122456789999999998876431
Q ss_pred -----------eEEEEEC-----------------------CCC---cEEEEeccCCcceEEEEEcCCCCEEEEEeC-CC
Q psy15549 215 -----------TAIMWDV-----------------------HKG---KNLGILTEHKKFVQGVAWDPKNQYVATLSS-DR 256 (621)
Q Consensus 215 -----------~i~vwd~-----------------------~~~---~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~-dg 256 (621)
.+.++++ ++. ..+..+. -......+.++|||+++++++. +.
T Consensus 219 ~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIP-VpKsPHGV~vSPDGKyi~VaGKLs~ 297 (459)
T d1fwxa2 219 TLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSP 297 (459)
T ss_dssp SHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEE-EESSCCCEEECTTSSEEEEECTTSS
T ss_pred chhhcccccceEEEEechHHhHHhhhcCCcEEeCCceeecccccCCcceeEEEe-cCCCCCceEECCCCCEEEEeCCcCC
Confidence 1333433 210 1111111 1122457889999999887665 88
Q ss_pred cEEEEEccCc
Q psy15549 257 SLRTYSIQSK 266 (621)
Q Consensus 257 ~i~iwd~~~~ 266 (621)
++.++|++..
T Consensus 298 tVSViD~~Ki 307 (459)
T d1fwxa2 298 TVTVLDVTRF 307 (459)
T ss_dssp BEEEEEGGGH
T ss_pred cEEEEEehhh
Confidence 9999999753
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.84 E-value=0.0057 Score=58.04 Aligned_cols=152 Identities=9% Similarity=0.088 Sum_probs=79.9
Q ss_pred eEEeccccccccceeeccccccccCcEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEE
Q psy15549 58 IWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVV 135 (621)
Q Consensus 58 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i 135 (621)
+||..++.-... ......|.......++.++|++++.|+ .+.+.+||...... .....+.... .-...
T Consensus 56 ~yd~~t~~w~~~----~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w-----~~~~~~~~~r-~~~~~ 125 (387)
T d1k3ia3 56 SWDPSTGIVSDR----TVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSW-----IPGPDMQVAR-GYQSS 125 (387)
T ss_dssp EECTTTCCBCCC----EEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEE-----EECCCCSSCC-SSCEE
T ss_pred EEECCCCcEeec----CCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCcc-----cccccccccc-cccce
Confidence 788776643211 001122333344567889999999987 45789999887633 2222222222 22356
Q ss_pred EECCCCCEEEEEeCC------CcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEE
Q psy15549 136 RFSPNGELLASGDDE------STIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLIS 209 (621)
Q Consensus 136 ~~sp~g~~l~s~s~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s 209 (621)
+..+||++++.|+.+ ..+.+||..+..-.. ++........... .......... ..+...++|+.++.
T Consensus 126 ~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~G~~~~~ 198 (387)
T d1k3ia3 126 ATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS-LPNAKVNPMLTAD-----KQGLYRSDNH-AWLFGWKKGSVFQA 198 (387)
T ss_dssp EECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE-ETTSCSGGGCCCC-----TTGGGTTTCS-CCEEECGGGCEEEC
T ss_pred eeecCCceeeeccccccccccceeeeecCCCCceee-cCCCccccccccc-----ccceeeccce-eEEEEeCCCCEEEe
Confidence 777899999988743 358899987764210 0000000000000 0000000011 11233457777888
Q ss_pred EeCCCeEEEEECCCCcE
Q psy15549 210 GSVDNTAIMWDVHKGKN 226 (621)
Q Consensus 210 ~~~dg~i~vwd~~~~~~ 226 (621)
+...+.+.+++..+...
T Consensus 199 g~~~~~~~~~~~~~~~~ 215 (387)
T d1k3ia3 199 GPSTAMNWYYTSGSGDV 215 (387)
T ss_dssp CSSSEEEEEECSTTCEE
T ss_pred cCcCCcEEecCcccCcE
Confidence 87778888888776643
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.64 E-value=0.018 Score=51.01 Aligned_cols=163 Identities=10% Similarity=0.032 Sum_probs=100.1
Q ss_pred cccccCcEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEE-EEeCCCcE
Q psy15549 77 LSRHQKAVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLA-SGDDESTI 153 (621)
Q Consensus 77 ~~~h~~~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~-s~s~dg~i 153 (621)
+..+...+.+++|.+..+.|.... .+.|...++.... ....+......+.++++..-+..|+ +-...+.|
T Consensus 31 ~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~-------~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I 103 (263)
T d1npea_ 31 LHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-------PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRI 103 (263)
T ss_dssp EEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-------CEEEECTTCCCEEEEEEETTTTEEEEEETTTTEE
T ss_pred cccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCC-------cEEEEEeccccccEEEEeccCCeEEEeccCCCEE
Confidence 334455688899999888887765 4445555555432 1111222234678899987555555 44556789
Q ss_pred EEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEe
Q psy15549 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD---NTAIMWDVHKGKNLGIL 230 (621)
Q Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~d---g~i~vwd~~~~~~~~~~ 230 (621)
.+.+++..... .........+..+++.|...+|+..... ..|.--++.........
T Consensus 104 ~~~~~dg~~~~---------------------~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~ 162 (263)
T d1npea_ 104 EVAKMDGTQRR---------------------VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILA 162 (263)
T ss_dssp EEEETTSCSCE---------------------EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEE
T ss_pred EEEecCCceEE---------------------EEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeee
Confidence 99998765431 1222334568899999977777655432 23544566443333333
Q ss_pred ccCCcceEEEEEcCCCCEEEEEe-CCCcEEEEEccCce
Q psy15549 231 TEHKKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQSKK 267 (621)
Q Consensus 231 ~~~~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~ 267 (621)
...-....++++++.++.|+.+. ..+.|...++....
T Consensus 163 ~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~ 200 (263)
T d1npea_ 163 QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (263)
T ss_dssp CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred eecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCC
Confidence 33345567999998888877664 46778888876543
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.51 E-value=0.0017 Score=60.48 Aligned_cols=271 Identities=12% Similarity=0.053 Sum_probs=143.3
Q ss_pred EEEEeCCCcEEEEEccCCCCCCCCCCCCccc---ccccccc--------e-eeeeeecCC------CCCe--EEEEECC-
Q psy15549 144 LASGDDESTIIVWKQKTDQDLPEFPSSNLDE---ENVNKEH--------W-IVTKILRGH------LEDV--YDISWSP- 202 (621)
Q Consensus 144 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~---~~~~~~~--------~-~~~~~~~~~------~~~v--~~i~~sp- 202 (621)
|.||+..|.|+|+-+.+++.+..++.-.... ...+.+. . .....+... .+.. -.+.+..
T Consensus 16 f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~TdG 95 (459)
T d1fwxa2 16 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 95 (459)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEETT
T ss_pred EeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccCC
Confidence 5678899999999999998876654322111 1111100 0 000000000 0111 1455543
Q ss_pred --CCCEEEEEeC-CCeEEEEECCCCcEEEEec-cCCcceEEEEEc--CCCCEEEEEeCCC------------------cE
Q psy15549 203 --TSTHLISGSV-DNTAIMWDVHKGKNLGILT-EHKKFVQGVAWD--PKNQYVATLSSDR------------------SL 258 (621)
Q Consensus 203 --d~~~l~s~~~-dg~i~vwd~~~~~~~~~~~-~~~~~v~~l~~s--p~~~~l~s~~~dg------------------~i 258 (621)
||++|++... ++.|-+.|+.+.++.+.+. .....+..++.. |+..|++..+.+. .+
T Consensus 96 tyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~ 175 (459)
T d1fwxa2 96 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 175 (459)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEE
T ss_pred ccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEE
Confidence 7888888774 7899999999998866443 234456666665 4556777766532 35
Q ss_pred EEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEeccccccCCCCCCcce-------
Q psy15549 259 RTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPI------- 331 (621)
Q Consensus 259 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s~~~~~~d~~i~~~------- 331 (621)
.++|..+.+...++... .....+.++++|+++++.+-. ....+.+.
T Consensus 176 t~ID~~tm~V~~QV~V~------------------------g~ld~~~~s~dGK~af~TsyN---SE~g~~l~e~ta~e~ 228 (459)
T d1fwxa2 176 TAVDADKWEVAWQVLVS------------------------GNLDNCDADYEGKWAFSTSYN---SEKGMTLPEMTAAEM 228 (459)
T ss_dssp EEEETTTTEEEEEEEES------------------------SCCCCEEECSSSSEEEEEESC---TTCCSSHHHHTCCSE
T ss_pred EEEecCCceEEEEeeeC------------------------CChhccccCCCCCEEEEEecc---ccCCcchhhcccccc
Confidence 67788887776655321 223578999999999987621 11111111
Q ss_pred eeeeeeeeccc-----CCCceecCCcccceeeeec---ccee--eecCCCCCCCCccCCCcEEEEEEc-CCcEEEEeCCC
Q psy15549 332 SVTHVFTRACL-----NKPAVCLPSLQYYSVAVKC---CPVL--FELKPSDDKPLFKLPYRIVIAVAT-ENNILLYDTQH 400 (621)
Q Consensus 332 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~ 400 (621)
+....+..... ........+. .+....- ...+ ........-..++++|+++++++. +.++.++|++.
T Consensus 229 D~i~V~n~~rie~av~~Gk~~eingV--~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~K 306 (459)
T d1fwxa2 229 DHIVVFNIAEIEKAIAAGDYQELNGV--KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR 306 (459)
T ss_dssp EEEEEEEHHHHHHHHHHTCSEEETTE--EEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGG
T ss_pred eEEEEechHHhHHhhhcCCcEEeCCc--eeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehh
Confidence 11111110000 0000000000 0000000 0000 011112224456678888888876 88999999864
Q ss_pred Ccee----------EEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecC
Q psy15549 401 ASPF----------AFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGD 443 (621)
Q Consensus 401 ~~~~----------~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~ 443 (621)
-..+ ........-.-...+|+..|....|.--|..|.-|++..
T Consensus 307 i~~~~~~~~~~~~~~~~e~elglgPLht~fd~~g~aytslfids~v~kw~~~~ 359 (459)
T d1fwxa2 307 FDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 359 (459)
T ss_dssp HHHHHHSCC-GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred hhhhhcccCCccccEEeecccCcCccccccCCCceEEEEeeccceEEEEecch
Confidence 2110 001011223456678888886555566899999999864
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.26 E-value=0.046 Score=51.40 Aligned_cols=118 Identities=14% Similarity=0.036 Sum_probs=75.7
Q ss_pred EEEEECCCCCEEEEEeCCC-----------cEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEEC
Q psy15549 133 NVVRFSPNGELLASGDDES-----------TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS 201 (621)
Q Consensus 133 ~~i~~sp~g~~l~s~s~dg-----------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s 201 (621)
.......+|+.++.|+.+. .+.+||..++.-.... .....+.......++.
T Consensus 23 ~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~------------------~~~~~~~~~~~~~~~~ 84 (387)
T d1k3ia3 23 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT------------------VTVTKHDMFCPGISMD 84 (387)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE------------------EEECSCCCSSCEEEEC
T ss_pred EEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecC------------------CCCCCcccceeEEEEe
Confidence 3444556788888877421 3678999887643211 1122343344567788
Q ss_pred CCCCEEEEEeCC-CeEEEEECCCCcEEEEecc-CCcceEEEEEcCCCCEEEEEeCC------CcEEEEEccCcee
Q psy15549 202 PTSTHLISGSVD-NTAIMWDVHKGKNLGILTE-HKKFVQGVAWDPKNQYVATLSSD------RSLRTYSIQSKKV 268 (621)
Q Consensus 202 pd~~~l~s~~~d-g~i~vwd~~~~~~~~~~~~-~~~~v~~l~~sp~~~~l~s~~~d------g~i~iwd~~~~~~ 268 (621)
+++++++.|+.+ ..+.+||..+..-...-.. ....-.+++..+||++++.++.+ ..+.+||..+.+-
T Consensus 85 ~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W 159 (387)
T d1k3ia3 85 GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 159 (387)
T ss_dssp TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred cCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCce
Confidence 999999988765 5899999987654322111 11122356778899999988753 3689999988764
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.23 E-value=0.06 Score=47.56 Aligned_cols=146 Identities=10% Similarity=0.072 Sum_probs=86.6
Q ss_pred EEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe-CCCcEEEEEccCCCCCCCCCCCCcc
Q psy15549 95 LLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DESTIIVWKQKTDQDLPEFPSSNLD 173 (621)
Q Consensus 95 ~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~ 173 (621)
||+.+....|+..++..... . .+......+.++.|.+..+.|+-.. ..+.|...++.........
T Consensus 3 fLl~s~~~~I~~~~l~~~~~-----~---~~~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~------ 68 (266)
T d1ijqa1 3 YLFFTNRHEVRKMTLDRSEY-----T---SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY------ 68 (266)
T ss_dssp EEEEECBSSEEEEETTSCCC-----E---EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------C------
T ss_pred EEEEECCCeEEEEECCCCcc-----e---eeeCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcce------
Confidence 56666666787777765421 1 1222345678899998777776654 4566776666543221110
Q ss_pred cccccccceeeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEE
Q psy15549 174 EENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISG-SVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATL 252 (621)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~ 252 (621)
..........+..+++.+.+..|..+ ...+.|.+.++........+.........++++|...+|+..
T Consensus 69 -----------~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~ 137 (266)
T d1ijqa1 69 -----------DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWT 137 (266)
T ss_dssp -----------EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEE
T ss_pred -----------EEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEe
Confidence 12223334456678887755555555 456789999997666555555555678899999977676655
Q ss_pred eC--CCcEEEEEccC
Q psy15549 253 SS--DRSLRTYSIQS 265 (621)
Q Consensus 253 ~~--dg~i~iwd~~~ 265 (621)
.. .+.|...++..
T Consensus 138 ~~~~~~~I~r~~~dG 152 (266)
T d1ijqa1 138 DWGTPAKIKKGGLNG 152 (266)
T ss_dssp ECSSSCEEEEEETTS
T ss_pred ccCCCcceeEeccCC
Confidence 43 34455555543
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.22 E-value=0.058 Score=47.25 Aligned_cols=216 Identities=8% Similarity=0.051 Sum_probs=127.2
Q ss_pred EEeccccccCCcceEEEEecCCceEEeeeccCcccc-------------------------ccceeEEecccccccccee
Q psy15549 18 SVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRL-------------------------KTGKIWYLTERESGIANVE 72 (621)
Q Consensus 18 ~l~~spd~~~~~~~~l~tg~~dg~v~~~d~~~~~~~-------------------------~~~~iw~~~~~~~~~~~~~ 72 (621)
+.-.+|..+ .||.-+ ...+.+||+++.+++ .++--|+++....+..-++
T Consensus 67 sAIMhP~~~-----IiALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~taVYHW~~~g~s~P~k~fd 140 (327)
T d1utca2 67 SAIMNPASK-----VIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFD 140 (327)
T ss_dssp EEEECSSSS-----EEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEESSSSEEEEECSSEEEEEESSSSCCCEEEEE
T ss_pred hhhcCCCCc-----EEEEec-CCeEEEEehhHhhhhceEEcCCCcEEEEecCCCEEEEEcCCceEEEcccCCCCchhhhh
Confidence 344677776 776655 457888988765544 2333455533222221111
Q ss_pred eccccccccCcEEEEEEccCCCEEEEEc----C----CceEEEEeccCccccccceecccccccCCCeEEEEECCCC---
Q psy15549 73 FASDLSRHQKAVNVVRFSPNGELLASGD----D----VGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG--- 141 (621)
Q Consensus 73 ~~~~~~~h~~~V~~l~~spdg~~las~~----d----~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g--- 141 (621)
....+. ...|-.-..+++.++++..+ + |.+++|..+.. ..+.+.||......+.+.-+.
T Consensus 141 R~~~L~--~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~--------~sQ~ieGhaa~F~~~~~~g~~~~~ 210 (327)
T d1utca2 141 RHSSLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--------VSQPIEGHAASFAQFKMEGNAEES 210 (327)
T ss_dssp CCGGGT--TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT--------EEEEECCSEEEEEEECCTTCSSCE
T ss_pred hccccc--CceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC--------cCccccceeeeeEEEEcCCCCCCc
Confidence 122221 34677778889999887643 3 34688888763 455677886655555443221
Q ss_pred CEEEEEe---CCCcEEEEEccCCCC-CCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEE
Q psy15549 142 ELLASGD---DESTIIVWKQKTDQD-LPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAI 217 (621)
Q Consensus 142 ~~l~s~s---~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~ 217 (621)
++|+.+. ..+.++|.++..... ...++... -.+...-.....-..++..++.-..+..-+.-|.|+
T Consensus 211 ~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~----------vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~ 280 (327)
T d1utca2 211 TLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKA----------VDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH 280 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEE----------EECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred eEEEEEECCCCCcEEEEEEcCCCccCCCCCccee----------EEEECCccccCCcEEEEEeeccCCEEEEEecCcEEE
Confidence 2343332 236889999877432 22221100 000000112234567888898888999999999999
Q ss_pred EEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCCCcEE
Q psy15549 218 MWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLR 259 (621)
Q Consensus 218 vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~dg~i~ 259 (621)
+||++++.++..-+--...|-..+-+.+..=++....+|.|.
T Consensus 281 lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl 322 (327)
T d1utca2 281 LYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 322 (327)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEEE
T ss_pred EEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCCeEE
Confidence 999999999887665556665444455544555566777654
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=97.21 E-value=0.079 Score=52.65 Aligned_cols=77 Identities=17% Similarity=0.099 Sum_probs=49.8
Q ss_pred CCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCccc-ccCCCCCCCC
Q psy15549 390 ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEES-KENDPTKGEP 468 (621)
Q Consensus 390 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 468 (621)
.|.|.-+|+.+++.+-+..... +..+-..+-.|.++++++.||.++.+|.++|+.+-.+........ -+.+..+|+.
T Consensus 443 ~G~l~AiD~~TG~~~W~~~~~~--~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkq 520 (571)
T d2ad6a1 443 MGQIRAFDLTTGKAKWTKWEKF--AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cccEEEeccCCCceeeEcCCCC--CCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEE
Confidence 3678889999998877664322 222111222466788899999999999999998876655443322 2233446653
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.18 E-value=0.066 Score=47.17 Aligned_cols=203 Identities=8% Similarity=-0.034 Sum_probs=119.7
Q ss_pred CCeEEEeccccccCCcceEEEEe-cCCceEEeeeccCccccccceeEEeccccccccceeeccccccccCcEEEEEEccC
Q psy15549 14 DPVLSVDIQLKQEKDNCYRIVTG-GADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92 (621)
Q Consensus 14 ~~v~~l~~spd~~~~~~~~l~tg-~~dg~v~~~d~~~~~~~~~~~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spd 92 (621)
..+.+|+|.+..+ +|.-. ..++.|. ..++........ +......+.++++..-
T Consensus 36 ~~~~~ld~D~~~~-----~iywsd~~~~~I~--------------~~~l~g~~~~~v-------~~~~~~~p~~iAvD~~ 89 (263)
T d1npea_ 36 KVIIGLAFDCVDK-----VVYWTDISEPSIG--------------RASLHGGEPTTI-------IRQDLGSPEGIALDHL 89 (263)
T ss_dssp EEEEEEEEETTTT-----EEEEEETTTTEEE--------------EEESSSCCCEEE-------ECTTCCCEEEEEEETT
T ss_pred CcEEEEEEEeCCC-----EEEEEECCCCeEE--------------EEEcccCCcEEE-------EEeccccccEEEEecc
Confidence 3577888887766 44443 4566666 555543322111 2222356889999876
Q ss_pred CCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCC-CcEEEE--EccCCCCCCCC
Q psy15549 93 GELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDE-STIIVW--KQKTDQDLPEF 167 (621)
Q Consensus 93 g~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~d-g~i~vw--d~~~~~~~~~~ 167 (621)
+..|..+. .+.|.+.++..... ...+...-..+..+++.|...+|+..... +..+|| +++.....
T Consensus 90 ~~~lY~~d~~~~~I~~~~~dg~~~-------~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~--- 159 (263)
T d1npea_ 90 GRTIFWTDSQLDRIEVAKMDGTQR-------RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR--- 159 (263)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSC-------EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE---
T ss_pred CCeEEEeccCCCEEEEEecCCceE-------EEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCce---
Confidence 66666554 56677887765421 11122223568899999977766654322 233444 44443321
Q ss_pred CCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCC
Q psy15549 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKN 246 (621)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~ 246 (621)
......-.....+++.+.++.|..+. ..+.|...++........+.+.. ...+|++. +
T Consensus 160 ------------------~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~-~P~~lav~--~ 218 (263)
T d1npea_ 160 ------------------ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ-YPFAVTSY--G 218 (263)
T ss_dssp ------------------EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC-SEEEEEEE--T
T ss_pred ------------------eeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCC-CcEEEEEE--C
Confidence 12222334568999988777776664 56789999986554433343333 34577776 4
Q ss_pred CEEEEEe-CCCcEEEEEccCceeeeecc
Q psy15549 247 QYVATLS-SDRSLRTYSIQSKKVISRAC 273 (621)
Q Consensus 247 ~~l~s~~-~dg~i~iwd~~~~~~~~~~~ 273 (621)
.+|+... ..+.|...|..+++.+..+.
T Consensus 219 ~~lYwtd~~~~~I~~~~~~~g~~~~~~~ 246 (263)
T d1npea_ 219 KNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (263)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred CEEEEEECCCCEEEEEECCCCccceEEC
Confidence 5565554 56788888998888766553
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=96.92 E-value=0.11 Score=51.60 Aligned_cols=52 Identities=12% Similarity=-0.008 Sum_probs=37.4
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEEe
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIASS 431 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~s 431 (621)
.++.+++++.|+.++-+|.++|+.+-.+..+....-.-+.|..||+ |+++..
T Consensus 474 agglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkqYi~v~~ 526 (571)
T d2ad6a1 474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSMY 526 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEEEEEEEe
Confidence 4577888899999999999999999887654333333356666886 555543
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=96.91 E-value=0.032 Score=55.93 Aligned_cols=76 Identities=16% Similarity=0.132 Sum_probs=50.5
Q ss_pred CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCccc-ccCCCCCCCC
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEES-KENDPTKGEP 468 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 468 (621)
|.|.-||+.+++.+-.... ..++.+-.++-.|.+++.|+.||.++.+|..+|+.+-.+........ -+.+..+|+.
T Consensus 453 G~l~A~D~~TG~~~W~~~~--~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQ 529 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKME--RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ 529 (596)
T ss_dssp EEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ceEEEEeCCCCceecccCC--CCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEE
Confidence 6788889999987766532 22333323334577888899999999999999998877765543322 2233456653
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.90 E-value=0.089 Score=50.27 Aligned_cols=104 Identities=18% Similarity=0.232 Sum_probs=65.1
Q ss_pred cCCCeEEEEECCCCCEEEEEe-----CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECC
Q psy15549 128 HQKAVNVVRFSPNGELLASGD-----DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSP 202 (621)
Q Consensus 128 h~~~V~~i~~sp~g~~l~s~s-----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~sp 202 (621)
+.-.+..++++|+++++|.+- .-..|+++|+.+++.+. ..+.. .....++|++
T Consensus 123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~--------------------~~i~~--~~~~~~~W~~ 180 (430)
T d1qfma1 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP--------------------DVLER--VKFSCMAWTH 180 (430)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE--------------------EEEEE--ECSCCEEECT
T ss_pred ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceecc--------------------ccccc--ccccceEEcC
Confidence 333455678899999888542 23379999999987431 11111 1124688999
Q ss_pred CCCEEEEEeCC----------------CeEEEEECCCCcE--EEEecc--CCcceEEEEEcCCCCEEEEEe
Q psy15549 203 TSTHLISGSVD----------------NTAIMWDVHKGKN--LGILTE--HKKFVQGVAWDPKNQYVATLS 253 (621)
Q Consensus 203 d~~~l~s~~~d----------------g~i~vwd~~~~~~--~~~~~~--~~~~v~~l~~sp~~~~l~s~~ 253 (621)
|++.|+....+ ..|..+.+.+... ...+.. ....+..+..++++++++...
T Consensus 181 D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~ 251 (430)
T d1qfma1 181 DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (430)
T ss_dssp TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEe
Confidence 99987755432 2588888876532 233333 233466777899999976543
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=96.84 E-value=0.03 Score=55.98 Aligned_cols=75 Identities=13% Similarity=0.134 Sum_probs=50.3
Q ss_pred CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCcccc-cCCCCCCC
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESK-ENDPTKGE 467 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 467 (621)
|.|.-||+.+++.+-....+ .+...-..+-.|.++++|+.||.++.||..+|+.+-.+......... +.+..+|+
T Consensus 457 G~l~AiD~~tGk~~W~~~~~--~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~Gk 532 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHV--SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGR 532 (573)
T ss_dssp EEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred ccEEEeCCCCCceEeeecCC--CCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence 57888899988877776432 22222223336778889999999999999999988777665433322 22335666
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.84 E-value=0.031 Score=53.70 Aligned_cols=105 Identities=12% Similarity=0.075 Sum_probs=64.1
Q ss_pred CeEEEEECCCCCEEEEEe-----CCCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEeCC-------------
Q psy15549 194 DVYDISWSPTSTHLISGS-----VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSD------------- 255 (621)
Q Consensus 194 ~v~~i~~spd~~~l~s~~-----~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~~d------------- 255 (621)
.+..++++||+++++.+- ....|+++|+.+++.+...-. ......++|++|++.|+....+
T Consensus 126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~-~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~ 204 (430)
T d1qfma1 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (430)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred eecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccc-cccccceEEcCCCCEEEEEEeccccCccccccccc
Confidence 345678899999888542 234799999999987643211 1122468899999987755432
Q ss_pred ---CcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeecCCCCeEEecc
Q psy15549 256 ---RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318 (621)
Q Consensus 256 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~~~s 318 (621)
..|..|.+.+...-. ..++........+..+..+.++++++...
T Consensus 205 ~~~~~v~~h~lgt~~~~d-------------------~~v~~e~d~~~~~~~~~~s~d~~~l~i~~ 251 (430)
T d1qfma1 205 NLHQKLYYHVLGTDQSED-------------------ILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (430)
T ss_dssp CCCCEEEEEETTSCGGGC-------------------EEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred CCcceEEEEECCCCcccc-------------------ccccccccCCceEEeeeccCCcceeeEEe
Confidence 245566655432111 11222222233456788899999987544
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.77 E-value=0.15 Score=44.60 Aligned_cols=242 Identities=11% Similarity=0.141 Sum_probs=141.6
Q ss_pred EEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCCCCC
Q psy15549 86 VVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLP 165 (621)
Q Consensus 86 ~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~~~~ 165 (621)
+.-.+|..+.||.-+...+++++++.. ..+..+. ....|.--.|-.+. .|+..+. ..|.-|+++.....
T Consensus 67 sAIMhP~~~IiALrag~~LQiFnletK-------~klks~~-~~e~VvfWkWis~~-~L~lVT~-taVYHW~~~g~s~P- 135 (327)
T d1utca2 67 SAIMNPASKVIALKAGKTLQIFNIEMK-------SKMKAHT-MTDDVTFWKWISLN-TVALVTD-NAVYHWSMEGESQP- 135 (327)
T ss_dssp EEEECSSSSEEEEEETTEEEEEETTTT-------EEEEEEE-CSSCCCEEEESSSS-EEEEECS-SEEEEEESSSSCCC-
T ss_pred hhhcCCCCcEEEEecCCeEEEEehhHh-------hhhceEE-cCCCcEEEEecCCC-EEEEEcC-CceEEEcccCCCCc-
Confidence 344689999999877788999999886 3343332 23467677787554 5555553 46999999654321
Q ss_pred CCCCCCcccccccccceeeeeeecCC----CCCeEEEEECCCCCEEEEEeC-------CCeEEEEECCCCcEEEEeccCC
Q psy15549 166 EFPSSNLDEENVNKEHWIVTKILRGH----LEDVYDISWSPTSTHLISGSV-------DNTAIMWDVHKGKNLGILTEHK 234 (621)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~i~~spd~~~l~s~~~-------dg~i~vwd~~~~~~~~~~~~~~ 234 (621)
.+.+..| ...|..-..+++.++++..+- .|.+.+|..+.+ .-+.+.+|.
T Consensus 136 -------------------~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieGha 195 (327)
T d1utca2 136 -------------------VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHA 195 (327)
T ss_dssp -------------------EEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSE
T ss_pred -------------------hhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCcccccee
Confidence 1333333 356777888889998776432 378899998654 456778887
Q ss_pred cceEEEEEcCCC---CEEEEEeC---CCcEEEEEccCceeeeecccCCCCCCCccccccccccccccCCcccceeeeeec
Q psy15549 235 KFVQGVAWDPKN---QYVATLSS---DRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFS 308 (621)
Q Consensus 235 ~~v~~l~~sp~~---~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 308 (621)
+....+.+.-+. ..|+.+.. .+.+.|.++.....- . .........+-|.
T Consensus 196 a~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g-------------~------------~~f~kk~vdi~fp 250 (327)
T d1utca2 196 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG-------------N------------QPFPKKAVDVFFP 250 (327)
T ss_dssp EEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTT-------------C------------CCCCCEEEECCCC
T ss_pred eeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccC-------------C------------CCCcceeEEEECC
Confidence 665555443221 23333322 245666665432100 0 0000011223333
Q ss_pred CCCCeEEeccccccCCCCCCcceeeeeeeeecccCCCceecCCcccceeeeeccceeeecCCCCCCCCccCCCcEEEEEE
Q psy15549 309 PDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVA 388 (621)
Q Consensus 309 pdg~~l~~~s~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (621)
|+.. .| .-.++. .+..++.+...+
T Consensus 251 pea~-----------~D-----------------------------FPvamq----------------vs~kygiiyviT 274 (327)
T d1utca2 251 PEAQ-----------ND-----------------------------FPVAMQ----------------ISEKHDVVFLIT 274 (327)
T ss_dssp TTCT-----------TC-----------------------------CEEEEE----------------EETTTTEEEEEE
T ss_pred cccc-----------CC-----------------------------cEEEEE----------------eeccCCEEEEEe
Confidence 3310 00 000011 111457788888
Q ss_pred cCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEE
Q psy15549 389 TENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIIS 440 (621)
Q Consensus 389 ~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~ 440 (621)
.-|.|++||+.++.++..-. .-...|...+-..+..-++....+|.|..-.
T Consensus 275 K~G~i~lyDleTgt~i~~nR-Is~~~iF~~a~~~~~~Gi~~VNr~GqVl~vs 325 (327)
T d1utca2 275 KYGYIHLYDLETGTCIYMNR-ISGETIFVTAPHEATAGIIGVNRKGQVLSVC 325 (327)
T ss_dssp TTSEEEEEETTTCCEEEEEE-CCSSCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred cCcEEEEEEcccccEEEEee-cCCCceEEeccCCCCceEEEECCCCeEEEEE
Confidence 99999999999999888763 3556777666666655566666788775443
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=96.60 E-value=0.071 Score=52.91 Aligned_cols=75 Identities=16% Similarity=0.127 Sum_probs=49.6
Q ss_pred CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCccc-ccCCCCCCC
Q psy15549 391 NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEES-KENDPTKGE 467 (621)
Q Consensus 391 g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 467 (621)
|.|.-||+.+++.+-....+ .+..+-.++-.|.++++|+.||.++.+|..+|+.+-.+..+..... -+.+..+|+
T Consensus 438 G~l~A~D~~tGk~~W~~~~~--~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGk 513 (560)
T d1kv9a2 438 GALLAWDPVKQKAAWKVPYP--THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGR 513 (560)
T ss_dssp EEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred cceEEEeCCCCeEeeeccCC--CCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence 67778999999887776432 2222222333567888899999999999999998877665443221 122335565
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.31 E-value=0.31 Score=42.69 Aligned_cols=162 Identities=9% Similarity=-0.071 Sum_probs=97.4
Q ss_pred cCcEEEEEEccCCCEEEEEc--CCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEe--CCCcEEEE
Q psy15549 81 QKAVNVVRFSPNGELLASGD--DVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD--DESTIIVW 156 (621)
Q Consensus 81 ~~~V~~l~~spdg~~las~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s--~dg~i~vw 156 (621)
...+..+++.+.+..|..+. .+.|.+.++.... ....+.........+++.|...+|+... ..+.|...
T Consensus 76 ~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~-------~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~ 148 (266)
T d1ijqa1 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 148 (266)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCCcceEEEeeccceEEEEecCCCEEEeEecCCce-------EEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEe
Confidence 34567788887666666654 5668888876542 2222333445678899998665555443 33456666
Q ss_pred EccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCcEEEEecc--C
Q psy15549 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGKNLGILTE--H 233 (621)
Q Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~--~ 233 (621)
+++..... ......-.....+++.+.++.|..+. ..+.|...++........... .
T Consensus 149 ~~dGs~~~---------------------~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~ 207 (266)
T d1ijqa1 149 GLNGVDIY---------------------SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 207 (266)
T ss_dssp ETTSCCEE---------------------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTT
T ss_pred ccCCCcee---------------------cccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCc
Confidence 66554321 22223345678999998877777664 468899999865443333222 2
Q ss_pred CcceEEEEEcCCCCEEEEEe-CCCcEEEEEccCceeeeec
Q psy15549 234 KKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQSKKVISRA 272 (621)
Q Consensus 234 ~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~~~ 272 (621)
.....++++. +.+|+... .++.|...+..++.....+
T Consensus 208 ~~~p~~lav~--~~~ly~td~~~~~I~~~~~~~g~~~~~~ 245 (266)
T d1ijqa1 208 LAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (266)
T ss_dssp TSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred ccccEEEEEE--CCEEEEEECCCCeEEEEECCCCcceEEE
Confidence 2345567776 44555444 5677877787776544433
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=96.06 E-value=0.82 Score=45.23 Aligned_cols=51 Identities=8% Similarity=-0.035 Sum_probs=35.5
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEE
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIAS 430 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~ 430 (621)
.++.+++++.||.++-||..+|+.+-.+..+....-.=|.|..||+ |++..
T Consensus 483 agglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQYvav~ 534 (596)
T d1w6sa_ 483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIY 534 (596)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEEEEEEE
Confidence 4577888989999999999999999887543222222244556886 55543
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.90 E-value=0.47 Score=43.15 Aligned_cols=166 Identities=16% Similarity=0.183 Sum_probs=90.2
Q ss_pred EEEEEEccCCCEEEEEc-------------CCceEEEEeccCccccccceeccc-ccccCCCeEEEEE--CCCCC-EEEE
Q psy15549 84 VNVVRFSPNGELLASGD-------------DVGKEIWYLTERESGIANVEFASD-LSRHQKAVNVVRF--SPNGE-LLAS 146 (621)
Q Consensus 84 V~~l~~spdg~~las~~-------------d~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~~i~~--sp~g~-~l~s 146 (621)
--.++..|+|..+++++ .+.+.++|+.........+..... ..........+.+ .++|. +|++
T Consensus 37 ~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v 116 (340)
T d1v04a_ 37 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 116 (340)
T ss_dssp CCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence 34577889998777654 256777787665432222221110 0001112233333 34555 3444
Q ss_pred Ee---CCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeee-cCCCCCeEEEEECCCCCEEEEEeC----------
Q psy15549 147 GD---DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKIL-RGHLEDVYDISWSPTSTHLISGSV---------- 212 (621)
Q Consensus 147 ~s---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~spd~~~l~s~~~---------- 212 (621)
.. ...+|.+|++...... +...... .........+++..++.+++|-..
T Consensus 117 vnH~~~~~~ieif~~~~~~~~-----------------l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~ 179 (340)
T d1v04a_ 117 VNHPGSSSTVEVFKFQEEEKS-----------------LLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSW 179 (340)
T ss_dssp EECSTTCCEEEEEEEETTTTE-----------------EEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHH
T ss_pred EeccCCCceeEEEEEeCCCCe-----------------EEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhh
Confidence 42 3457888887654321 0111222 223355788988888888887321
Q ss_pred -----CCeEEEEECCCCcEEEEeccCCcceEEEEEcCCCCEEEEEe-CCCcEEEEEccCce
Q psy15549 213 -----DNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLS-SDRSLRTYSIQSKK 267 (621)
Q Consensus 213 -----dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~~-~dg~i~iwd~~~~~ 267 (621)
-+...+|....++. ......-.....++++|++++|+++. ..+.|++|++....
T Consensus 180 e~~~~~~~g~v~~~~~~~~-~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~ 239 (340)
T d1v04a_ 180 EMHLGLAWSFVTYYSPNDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANW 239 (340)
T ss_dssp HHHTTCCCEEEEEECSSCE-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred hHhhcCCceeEEEEcCCce-EEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCc
Confidence 12234444444433 22223334578899999999877665 46789999987543
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=95.17 E-value=1.2 Score=43.68 Aligned_cols=52 Identities=8% Similarity=0.096 Sum_probs=36.6
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEEe
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIASS 431 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~s 431 (621)
.++.+++++.||.++-||..+|+.+-.+..+....-.-+.+..||+ ||+..+
T Consensus 468 agglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~v~a 520 (560)
T d1kv9a2 468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (560)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEEEe
Confidence 4578888889999999999999999887653222222255566886 555443
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.09 E-value=1.8 Score=42.59 Aligned_cols=77 Identities=14% Similarity=0.075 Sum_probs=53.0
Q ss_pred CCcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCcEEEEEecCCcCCcccCCCCCccc-ccCCCCCCCC
Q psy15549 390 ENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEES-KENDPTKGEP 468 (621)
Q Consensus 390 dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 468 (621)
.|.|.-+|+.+++.+-....+ .++..-..+-.|..+++|+.||.++.+|..+|+.+-.+..+..... -+.+..+|+.
T Consensus 465 ~G~l~AiD~~TG~i~W~~~~~--~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~q 542 (582)
T d1flga_ 465 VGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCeEEEEcCCCCcEEeecCCC--CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence 467888999999888777542 2333323345677888899999999999999998877665443322 2344466763
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.00 E-value=1.9 Score=42.39 Aligned_cols=51 Identities=16% Similarity=0.186 Sum_probs=37.2
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEE
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIAS 430 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~ 430 (621)
.++.+++++.||.++-||..+|+.+-.+..+....-.=|.|..+|+ |++..
T Consensus 496 agglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qYv~i~ 547 (582)
T d1flga_ 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred cCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEEE
Confidence 4578888889999999999999999887653332222366677886 55543
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.98 E-value=0.52 Score=43.28 Aligned_cols=142 Identities=11% Similarity=-0.007 Sum_probs=80.5
Q ss_pred cEEEEEEccCCCEEEEEcCCceEEEEeccCccccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 83 AVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 83 ~V~~l~~spdg~~las~~d~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
.|..++|+-| .|+...++++..++..... .......-..++..+.++|. .++....++.+.++++....
T Consensus 88 ~v~~vafs~d--~l~v~~~~~l~~~~~~~l~-------~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~ 156 (381)
T d1xipa_ 88 DVIFVCFHGD--QVLVSTRNALYSLDLEELS-------EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKS 156 (381)
T ss_dssp TEEEEEEETT--EEEEEESSEEEEEESSSTT-------CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCC
T ss_pred CeEEEEeeCC--EEEEEeCCCEEEEEeeccc-------cccccccccccccceecCCc--eeEEEecCCCEEEEEeccCc
Confidence 5888999744 5777777777777766532 11111223456788888775 56677778999999988775
Q ss_pred CCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEE-ECCCCcEEEEeccCCcceEEEE
Q psy15549 163 DLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMW-DVHKGKNLGILTEHKKFVQGVA 241 (621)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vw-d~~~~~~~~~~~~~~~~v~~l~ 241 (621)
...... . ...+. -...+.+++|++.|.+++++..+. ..+- ++.....+.........|.++.
T Consensus 157 ~~~~~~-------~--------v~~~~-~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~~~~~p~~~~~~v~sI~ 219 (381)
T d1xipa_ 157 TKQLAQ-------N--------VTSFD-VTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSELEELPVEEYSPLSVT 219 (381)
T ss_dssp EEEEEE-------S--------EEEEE-ECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCHHHHTSCTTTSEEEEEE
T ss_pred cccccC-------C--------cceEE-ecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCccccCCCcCCCcceeEEE
Confidence 311000 0 00011 125578888888888887764322 2211 1111111100012345688999
Q ss_pred EcCCCCEEEEE
Q psy15549 242 WDPKNQYVATL 252 (621)
Q Consensus 242 ~sp~~~~l~s~ 252 (621)
|-.+..++++-
T Consensus 220 WL~~~~F~vvy 230 (381)
T d1xipa_ 220 ILSPQDFLAVF 230 (381)
T ss_dssp ESSSSEEEEEE
T ss_pred EecCceEEEEE
Confidence 98776666654
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=94.93 E-value=1.8 Score=42.49 Aligned_cols=51 Identities=10% Similarity=0.108 Sum_probs=35.3
Q ss_pred CCcEEEEEEcCCcEEEEeCCCCceeEEEecccccceEEEEEcCCCC-eEEEE
Q psy15549 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIAS 430 (621)
Q Consensus 380 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~ 430 (621)
.++.+++++.|+.++.||..+|+.+-.+..+....-.=+.|..||+ |++..
T Consensus 487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQYv~v~ 538 (573)
T d1kb0a2 487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVA 538 (573)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEEE
Confidence 4578889999999999999999999887542211111245556887 54443
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=93.97 E-value=2.1 Score=38.59 Aligned_cols=139 Identities=13% Similarity=0.122 Sum_probs=76.1
Q ss_pred ccCCCE-EEEE----cCCceEEEEeccCccccccceecccccc-cCCCeEEEEECCCCCEEEEEe--C------------
Q psy15549 90 SPNGEL-LASG----DDVGKEIWYLTERESGIANVEFASDLSR-HQKAVNVVRFSPNGELLASGD--D------------ 149 (621)
Q Consensus 90 spdg~~-las~----~d~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~i~~sp~g~~l~s~s--~------------ 149 (621)
.++|++ |++. ....|.+|++...+.. +..+..+.. .....+.+++..++.+++|-. .
T Consensus 107 ~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~---l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~ 183 (340)
T d1v04a_ 107 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKS---LLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHL 183 (340)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTTE---EEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHT
T ss_pred cCCCcEEEEEEeccCCCceeEEEEEeCCCCe---EEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhh
Confidence 456663 3332 2456888888765432 222222222 224578888888888888731 1
Q ss_pred -CCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCcEE
Q psy15549 150 -ESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGKNL 227 (621)
Q Consensus 150 -dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~-~dg~i~vwd~~~~~~~ 227 (621)
-+...+|..+.+.. ......-...+.|+++||+++|+++. ..+.|++|++.....+
T Consensus 184 ~~~~g~v~~~~~~~~----------------------~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l 241 (340)
T d1v04a_ 184 GLAWSFVTYYSPNDV----------------------RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTL 241 (340)
T ss_dssp TCCCEEEEEECSSCE----------------------EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred cCCceeEEEEcCCce----------------------EEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCccc
Confidence 12334444433321 22223335578999999998776655 4688999998654322
Q ss_pred EEe--ccCCcceEEEEEcCCCCEEEEEe
Q psy15549 228 GIL--TEHKKFVQGVAWDPKNQYVATLS 253 (621)
Q Consensus 228 ~~~--~~~~~~v~~l~~sp~~~~l~s~~ 253 (621)
... ..-.+..-.+.+.+.+..+.+++
T Consensus 242 ~~~~~~~l~~~pDNi~~d~~~g~lwva~ 269 (340)
T d1v04a_ 242 TPLRVLSFDTLVDNISVDPVTGDLWVGC 269 (340)
T ss_dssp EEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred ceEEEecCCCCCCccEEecCCCEEEEEE
Confidence 221 11233455677766433343444
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=93.92 E-value=2.1 Score=38.54 Aligned_cols=127 Identities=12% Similarity=0.094 Sum_probs=76.6
Q ss_pred CeEEEEE--CCC-CC-EEEEEeCCCcEEEEEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCE
Q psy15549 131 AVNVVRF--SPN-GE-LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTH 206 (621)
Q Consensus 131 ~V~~i~~--sp~-g~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~ 206 (621)
.+..+|+ ++. |. +++....+|.+..|.+........ .....+.+ .-...+..|.+......
T Consensus 129 ~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v--------------~~~lvr~f-~~~~q~EGCVvDde~~~ 193 (353)
T d1h6la_ 129 EVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYI--------------SGKKVRAF-KMNSQTEGMAADDEYGS 193 (353)
T ss_dssp SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSE--------------EEEEEEEE-ECSSCEEEEEEETTTTE
T ss_pred cceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCce--------------eeEeeecc-CCCCccceEEEeCCCCc
Confidence 4666776 664 54 556677889999988754332100 00112222 23457899999998899
Q ss_pred EEEEeCCCeEEEEECCC-----CcEEEEecc--CCcceEEEEEcC--CCC-EEEEEe-CCCcEEEEEccCc-eeeeec
Q psy15549 207 LISGSVDNTAIMWDVHK-----GKNLGILTE--HKKFVQGVAWDP--KNQ-YVATLS-SDRSLRTYSIQSK-KVISRA 272 (621)
Q Consensus 207 l~s~~~dg~i~vwd~~~-----~~~~~~~~~--~~~~v~~l~~sp--~~~-~l~s~~-~dg~i~iwd~~~~-~~~~~~ 272 (621)
|+.+-++.-|+.+++.- +..+....+ ....+..|+.-. ++. ||++.+ .+++..+||..+. ..+..+
T Consensus 194 LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~~g~F 271 (353)
T d1h6la_ 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKYVADF 271 (353)
T ss_dssp EEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccccceE
Confidence 99999887777777642 222222222 345677777543 333 555444 4688999998763 444443
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.48 E-value=2.7 Score=38.29 Aligned_cols=141 Identities=9% Similarity=0.063 Sum_probs=84.6
Q ss_pred CcEEEEEEccCCCEEEEEcCCceEEEEeccCc------cccccceecccccccCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy15549 82 KAVNVVRFSPNGELLASGDDVGKEIWYLTERE------SGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIV 155 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~d~~v~iw~~~~~~------~~~~~~~~~~~~~~h~~~V~~i~~sp~g~~l~s~s~dg~i~v 155 (621)
....-++.++...++++|+..+++|.....-. .....+.....+ ..|..++|+.+ .|+... ++.+..
T Consensus 37 ~~~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~~~~~~i----p~v~~vafs~d--~l~v~~-~~~l~~ 109 (381)
T d1xipa_ 37 ASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEI----PDVIFVCFHGD--QVLVST-RNALYS 109 (381)
T ss_dssp SCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEEC----TTEEEEEEETT--EEEEEE-SSEEEE
T ss_pred cccceEEEeCCCCEEEEECCCEEEEEEHHHHHHHhhccCCCCcceeccCC----CCeEEEEeeCC--EEEEEe-CCCEEE
Confidence 34667888998888888887788887754321 000111111111 35888999754 455543 456777
Q ss_pred EEccCCCCCCCCCCCCcccccccccceeeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEecc---
Q psy15549 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE--- 232 (621)
Q Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~spd~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--- 232 (621)
++...-... .....-...+..+.++|. .++....+|.+.++++..++......+
T Consensus 110 ~~~~~l~~~---------------------~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~ 166 (381)
T d1xipa_ 110 LDLEELSEF---------------------RTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTS 166 (381)
T ss_dssp EESSSTTCE---------------------EEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEE
T ss_pred EEeeccccc---------------------cccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcce
Confidence 776654321 122223456788888875 566677789999999988764332211
Q ss_pred --CCcceEEEEEcCCCCEEEEE
Q psy15549 233 --HKKFVQGVAWDPKNQYVATL 252 (621)
Q Consensus 233 --~~~~v~~l~~sp~~~~l~s~ 252 (621)
-.+.+.+++|++.|..++++
T Consensus 167 ~~~~~~~~~v~ws~kgkq~v~~ 188 (381)
T d1xipa_ 167 FDVTNSQLAVLLKDRSFQSFAW 188 (381)
T ss_dssp EEECSSEEEEEETTSCEEEEEE
T ss_pred EEecCCceEEEEeCCcEEEEEe
Confidence 12345666666666666554
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.75 E-value=3.6 Score=35.52 Aligned_cols=64 Identities=17% Similarity=0.160 Sum_probs=32.4
Q ss_pred CcEEEEEEcC-----CcEEEEeCCCCceeEEEecccccceEEEEEcCCCCeEEEEeCCCc-----EEEEEecCCc
Q psy15549 381 YRIVIAVATE-----NNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGY-----CSIISFGDNE 445 (621)
Q Consensus 381 ~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~s~dg~-----i~iw~~~~~~ 445 (621)
+..++.++.+ ....+||..+.+............-.+++ ..+++.++.|+.++. |.+||+.+++
T Consensus 196 ~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 269 (288)
T d1zgka1 196 NCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGIT-VHQGRIYVLGGYDGHTFLDSVECYDPDTDT 269 (288)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred eeEEEecCccccccccceeeeeecceeeecccCccCcccceEEE-EECCEEEEEecCCCCeecceEEEEECCCCE
Confidence 3444554433 35677887766533221111111111222 236788887775543 7788887654
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=91.00 E-value=6.3 Score=36.88 Aligned_cols=33 Identities=6% Similarity=0.230 Sum_probs=27.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q psy15549 130 KAVNVVRFSPNGELLASGDDESTIIVWKQKTDQ 162 (621)
Q Consensus 130 ~~V~~i~~sp~g~~l~s~s~dg~i~vwd~~~~~ 162 (621)
...++|+|.|+|++|++--..|.|++++..++.
T Consensus 27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~ 59 (450)
T d1crua_ 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGS 59 (450)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CCceEEEEeCCCeEEEEEecCCEEEEEECCCCc
Confidence 467799999999988887667999999877664
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=90.87 E-value=4.8 Score=37.74 Aligned_cols=57 Identities=9% Similarity=0.035 Sum_probs=36.7
Q ss_pred CcEEEEEEccCCCEEEEEc-CCceEEEEeccCccccccceec---ccccccCCCeEEEEECCC
Q psy15549 82 KAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFA---SDLSRHQKAVNVVRFSPN 140 (621)
Q Consensus 82 ~~V~~l~~spdg~~las~~-d~~v~iw~~~~~~~~~~~~~~~---~~~~~h~~~V~~i~~sp~ 140 (621)
..-.+|+|.|||++|++-- .+.|++++...+... .+..+ ............|+|+|+
T Consensus 27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~--~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVK--TVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE--EEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEe--ecccCCccccccCCCCceeeEEeCCC
Confidence 4677999999999999885 677877765554221 11111 111223457889999984
|