Diaphorina citri psyllid: psy15562


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
EVSKAINKTRSLYKRWLELKEETYASNILRDELEWTTTELRNSLRSIEWDLEDLEDTINILYNNFDFIEHLCMKDTMNYSREKDRGGDHMSSKPLLSDDFHSPSPVKISAPFGSSRQTKYSKLNNQMDSPNRSWLSNSINQQSAMFDQQDSQLDMLSETIGTLTVQVRRQTKYSKLNNQMDSPNRSWVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKVAKVLHISNGEMLDEMGNEMECTESKLDATMKKVAKVLHISNVFCSYEMNLFCSSEMNCKKKAT
cHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc
EVSKAINKTRSLYKRWLELKEETYASNILRDELEWTTTELRNSLRSIEWDLEDLEDTINILYNNFDFIEHLCMKDT***************************************************************************************T******************************************DMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKVAKVLHISNG*MLDEMGNEMECTESKLDATMKKVAKVLHISNVFCSYEMNLFCSSEMNCK****
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EVSKAINKTRSLYKRWLELKEETYASNILRDELEWTxxxxxxxxxxxxxxxxxxxxxxxxxxxxFDFIEHLCMKDTMNYSREKDRGGDHMSSKPLLSDDFHSPSPVKISAPFGSSRQTKYSKLNNQMDSPNRSWLSNSINQQSAMFDQQDSQLDMLSETIGTLTVQVRRQTKYSKLNNQMDSPNRSWVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQALMxxxxxxxxxxxxxxxxxxxxxVAKVLHISNGEMxxxxxxxxxxxxxxxxxxxxxVAKVLHISNVFCSYEMNLFCSSEMNCKKKAT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Syntaxin-6 Involved in intracellular vesicle trafficking.confidentQ5ZL19
Syntaxin-6 Involved in intracellular vesicle trafficking.confidentO43752
Syntaxin-6 Involved in intracellular vesicle trafficking.confidentQ63635

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0031201 [CC]SNARE complexprobableGO:0043234, GO:0005737, GO:0032991, GO:0016020, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0044425

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4DND, chain A
Confidence level:very confident
Coverage over the Query: 1-19,31-85
View the alignment between query and template
View the model in PyMOL
Template: 2NPS, chain D
Confidence level:very confident
Coverage over the Query: 203-265
View the alignment between query and template
View the model in PyMOL
Template: 2NPS, chain D
Confidence level:confident
Coverage over the Query: 150-166,186-214
View the alignment between query and template
View the model in PyMOL