Diaphorina citri psyllid: psy1562

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620
MNSNNNVPYKMNNMSPYSFVPAYQHVAPVQNSGLNNMDMAAHQMTYNRPPEYYYDDTTHQQMPVLPQPHSLNNMDMAAHQMTYNRPPEYYYDDTTHQQMPVLPQPHSNIIPPSVGSYQSWTTEVLTIALMLLKPRTVGYDRISHTGEKLNHRVDLKKLTSFNNEAPTDLATRCDKSSCTLPYCFCSKDGTIIPGGLDAEDTPQMILLTFDGAVNLNNYDHYQKVFSDSRKNPNGCPMKGTFFISHEYSDYSMIQNLANRGHEIGVETISLQDGLQDKGYEEWVGEMIGMREILHHFANITRSDIVGMRAPFLLPGRNTQFEVVEDFGFIYDSSVSVPALKFPVWPYTLDHKIPHECKSGTCPTKSFPGVWEVPLNAHFVESYEGGHCPYLDQCVLHNHDSDEVLEWLKEDFNKYYTQNKAPYMMPFHTNWFQIKELEQGLHKFLDWAAQNTLHDAIPHQLVPNQRAGTGTTQVLGLGCSKCVDHHPYVSLCPSGLYFDDIKKLCTFKNEARCGPLPTSKPDVWFVTITQALTWMTNPKSSKELLNYDAWKCAKSETAPLEACNLPNKCALGFRPPEANISATRYLTTCRECPRKYPWLGDSEGTGIAGRDVYNPEIQRRR
ccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccHHHHHHHHcccccccccccccEEEEEEcccccHHHHHHHHHHccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccEECcccccccccccHHHHHHHcccEECcccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccCEEEccccHHccccHHHHHHHHHHHHHHccccEEEccccHHHHcccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEEcHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccc
******V***MNNMSPYSFVPAYQHVAPVQNSGLNNMDMAAHQMTYNRPPEYYYDDTTHQQMPVLPQPHSLNNMDMAAHQMTYNRPPEYYYDDTTHQQ**********IIPPSVGSYQSWTTEVLTIALMLLKPRTVGYDRISHTGEKLNHRVDLKKLTSFNNEAPTDLATRCDKSSCTLPYCFCSKDGTIIPGGLDAEDTPQMILLTFDGAVNLNNYDHYQKVFSDSRKNPNGCPMKGTFFISHEYSDYSMIQNLANRGHEIGVETISLQDGLQDKGYEEWVGEMIGMREILHHFANITRSDIVGMRAPFLLPGRNTQFEVVEDFGFIYDSSVSVPALKFPVWPYTLDHKIPHECKSGTCPTKSFPGVWEVPLNAHFVESYEGGHCPYLDQCVLHNHDSDEVLEWLKEDFNKYYTQNKAPYMMPFHTNWFQIKELEQGLHKFLDWAAQNTLHDAIPHQLVPNQRAGTGTTQVLGLGCSKCVDHHPYVSLCPSGLYFDDIKKLCTFKNEARCGPLPTSKPDVWFVTITQALTWMTNPKSSKELLNYDAWKCAKSETAPLEACNLPNKCALGFRPPEANISATRYLTTCRECPRKYPWLGDSEGTGIAGRDV*********
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MNSNNNVPYKMNNMSPYSFVPAYQHVAPVQNSGLNNMDMAAHQMTYNRPPEYYYDDTTHQQMPVLPQPHSLNNMDMAAHQMTYNRPPEYYYDDTTHQQMPVLPQPHSNIIPPSVGSYQSWTTEVLTIALMLLKPRTVGYDRISHTGEKLNHRVDLKKLTSFNNEAPTDLATRCDKSSCTLPYCFCSKDGTIIPGGLDAEDTPQMILLTFDGAVNLNNYDHYQKVFSDSRKNPNGCPMKGTFFISHEYSDYSMIQNLANRGHEIGVETISLQDGLQDKGYEEWVGEMIGMREILHHFANITRSDIVGMRAPFLLPGRNTQFEVVEDFGFIYDSSVSVPALKFPVWPYTLDHKIPHECKSGTCPTKSFPGVWEVPLNAHFVESYEGGHCPYLDQCVLHNHDSDEVLEWLKEDFNKYYTQNKAPYMMPFHTNWFQIKELEQGLHKFLDWAAQNTLHDAIPHQLVPNQRAGTGTTQVLGLGCSKCVDHHPYVSLCPSGLYFDDIKKLCTFKNEARCGPLPTSKPDVWFVTITQALTWMTNPKSSKELLNYDAWKCAKSETAPLEACNLPNKCALGFRPPEANISATRYLTTCRECPRKYPWLGDSEGTGIAGRDVYNPEIQRRR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfer were detected in SWISS-PROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005575 [CC]cellular_componentprobable
GO:0022008 [BP]neurogenesisprobableGO:0032502, GO:0048856, GO:0044707, GO:0007399, GO:0048869, GO:0030154, GO:0008150, GO:0032501, GO:0044763, GO:0048731, GO:0009987, GO:0007275, GO:0044699

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3QBU, chain A
Confidence level:very confident
Coverage over the Query: 218-449,519-540
View the alignment between query and template
View the model in PyMOL
Template: 2W3Z, chain A
Confidence level:confident
Coverage over the Query: 178-331,343-350,380-449
View the alignment between query and template
View the model in PyMOL
Template: 1DQC, chain A
Confidence level:confident
Coverage over the Query: 479-524
View the alignment between query and template
View the model in PyMOL