Diaphorina citri psyllid: psy15783


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80------
MTILNLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRVKVNENYFRPTEVIGT
ccccccccHHHHHHHHHcccccccEEEEccccEEHHHHHHHHHHHcccEEEEEECcccCEEEECccccEEEEEccccccccccccc
*TILNLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRVKVNENYFRPTEVIG*
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MTILNLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRVKVNENYFRPTEVIGT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
GDP-mannose 4,6 dehydratase Conversion of GDP-D-mannose to GDP-4-keto-6-D-deoxymannose.confidentQ9VMW9
GDP-mannose 4,6 dehydratase Conversion of GDP-D-mannose to GDP-4-keto-6-D-deoxymannose.confidentQ8K0C9
GDP-mannose 4,6 dehydratase Conversion of GDP-D-mannose to GDP-4-keto-6-D-deoxymannose.confidentQ8K3X3

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0007219 [BP]Notch signaling pathwayprobableGO:0044700, GO:0051716, GO:0008150, GO:0050896, GO:0009987, GO:0050794, GO:0023052, GO:0065007, GO:0044763, GO:0007165, GO:0007166, GO:0007154, GO:0050789, GO:0044699
GO:2000035 [BP]regulation of stem cell divisionprobableGO:0050789, GO:0008150, GO:0065007, GO:0051302, GO:0050794
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0048646 [BP]anatomical structure formation involved in morphogenesisprobableGO:0032502, GO:0009653, GO:0008150, GO:0048856
GO:0019673 [BP]GDP-mannose metabolic processprobableGO:0034641, GO:0006807, GO:0044281, GO:1901360, GO:0006139, GO:0044710, GO:0071704, GO:0009225, GO:0009987, GO:0006725, GO:0009117, GO:0008152, GO:0055086, GO:0046483, GO:0044238, GO:1901135, GO:0044237, GO:0006796, GO:0006793, GO:0019637, GO:0008150, GO:0006753
GO:0055120 [CC]striated muscle dense bodyprobableGO:0005737, GO:0043232, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0044444, GO:0043228, GO:0043292, GO:0043226, GO:0044422, GO:0044449
GO:0030017 [CC]sarcomereprobableGO:0005737, GO:0005575, GO:0043232, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0030016, GO:0044424, GO:0044444, GO:0043228, GO:0043292, GO:0043226, GO:0044422, GO:0044449
GO:0008446 [MF]GDP-mannose 4,6-dehydratase activityprobableGO:0016835, GO:0016836, GO:0003674, GO:0016829, GO:0003824
GO:0042351 [BP]'de novo' GDP-L-fucose biosynthetic processprobableGO:0046368, GO:0044249, GO:0034641, GO:0009165, GO:0044281, GO:1901362, GO:1901360, GO:1901576, GO:0044710, GO:0042350, GO:0008150, GO:0071704, GO:0018130, GO:0009987, GO:0006139, GO:0009225, GO:0009226, GO:0006725, GO:0009058, GO:0009117, GO:0008152, GO:0034654, GO:0090407, GO:0055086, GO:0046483, GO:0044238, GO:0044271, GO:1901137, GO:1901135, GO:0044237, GO:0006796, GO:0006807, GO:1901293, GO:0006793, GO:0019637, GO:0019438, GO:0006753
GO:0044767 [BP]single-organism developmental processprobableGO:0032502, GO:0008150, GO:0044699
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0070401 [MF]NADP+ bindingprobableGO:0043168, GO:0050662, GO:0050661, GO:0097159, GO:0000166, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:0043167, GO:1901363, GO:1901265

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1T2A, chain A
Confidence level:very confident
Coverage over the Query: 5-53
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
3nzo, chain Aprobable Alignment | Template Structure