Diaphorina citri psyllid: psy1579


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
MLMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDKFQLIKDPNIPDDVQKENDLNFQFKVFQKELAPKPHSLNVWNHKNYNFRVTVILTYMCGRYNNNNLPM
cEEEEEEccccEEEcccccccccHHHHHHHHHHcccccccccccEEEEccccccccccccccccccccEEEccccccccccccccEEEEccHHHHHHHHHcccccccccEEEEEEcHHHHHcccccccccccccccccHHHHHHccccccHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccEECccccccccccccccEEEEEEEEEEccccccccccccccccccEEEEEEEEEEEcccccccccc
MLMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDKFQLIKDPNIPDDVQKENDLNFQFKVFQKELAPKPHSLN***HKNYNFRVTVILTYMCGRYNN*****
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MLMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDKFQLIKDPNIPDDVQKENDLNFQFKVFQKELAPKPHSLNVWNHKNYNFRVTVILTYMCGRYNNNNLPM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Dihydrofolate reductase Key enzyme in folate metabolism. Contributes to the de novo mitochondrial thymidylate biosynthesis pathway. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. May binds to mRNA.confidentP00378
Dihydrofolate reductase Key enzyme in folate metabolism. Contributes to the de novo mitochondrial thymidylate biosynthesis pathway. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. Binds its own mRNA and that of DHFRL1.confidentP00374
Dihydrofolate reductase Key enzyme in folate metabolism. Contributes to the de novo mitochondrial thymidylate biosynthesis pathway. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. Binds its own mRNA and that of DHFRL1.confidentP00375

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0046653 [BP]tetrahydrofolate metabolic processprobableGO:0006732, GO:0019752, GO:0006807, GO:0044281, GO:1901360, GO:0044710, GO:0051186, GO:0006520, GO:0042558, GO:0071704, GO:1901605, GO:0006760, GO:0009987, GO:0006725, GO:0008150, GO:0008152, GO:0043436, GO:0046483, GO:0044238, GO:1901564, GO:0006575, GO:0006082, GO:0044237
GO:0003729 [MF]mRNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3CSE, chain A
Confidence level:very confident
Coverage over the Query: 2-121,160-223
View the alignment between query and template
View the model in PyMOL
Template: 2CIG, chain A
Confidence level:probable
Coverage over the Query: 25-97,108-164
View the alignment between query and template
View the model in PyMOL