Diaphorina citri psyllid: psy15852

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-
MTAESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIVHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGGILYKPLLFYELNELGISGRSLVCRTGPMVQATPPLAEVDVTGVIMILLGAKNHNSDENPTSRSHPSQNAIKLYLTRSSYREWGHVADNLLLCDNFPSIRELEIPEAFLTKTTTVPMTTTEHMVLVTGTDMMHMEVTEAVPMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGELDYLQLWQFFDWISSSFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYSN
ccccccccccccccccccccccccccccccccEEEcccccccccHHHHHHHHHccccEEEEEEEcccccccccccccccEEEEccEEEccccccccccccccEEEccccccccHHHHHHHHccccEEEEEEEcccccccccccEEEEEccHHHHHHHHHHHHHcccccEEccccccccccccccccEEECcccccccHHHHHHHHHccccEEEEEEEccccccccccCEEEEEcccHHHHHHHHcccCEEccCEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccEEEEccccccccccccccCEEcccccccEEECcccccccccccccccccccEEEEEcccccHHHHHHcccccEEEEEEEccccccccccEEEEEEcccHHHHHHHHcccCECccCEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCEECcccccccHHHHHHHHHccccEEEEEEEEcccccccccEEEEEEccccHHHHHHHcccccccc
*******************************KLFCPLSSYLELDYLQLWQYFDWVSSSFSENCLLEDSIGKPLTVSCSHHYYLFDQIL*********AKNKMVSHPGIVHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN**IE*****AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDV****************************MAGGYGGYGGYGGGYGGILYKPLLFYELNELGISGRSLVCRTGPMVQATPPLAEVDVTGVIMILLGA******************AIKLYLTRSSYREWGHVADNLLLCDNFPSIRELEIPEAFLTKTTTVPMTTTEHMVLVTGTDMMHMEVTEAVPMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDV************************RGGRMAGGYGGYGGYGGGYGELDYLQLWQFFDWISSSFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF***
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MTAESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIVHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGGILYKPLLFYELNELGISGRSLVCRTGPMVQATPPLAEVDVTGVIMILLGAKNHNSDENPTSRSHPSQNAIKLYLTRSSYREWGHVADNLLLCDNFPSIRELEIPEAFLTKTTTVPMTTTEHMVLVTGTDMMHMEVTEAVPMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGELDYLQLWQFFDWISSSFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYSN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043565 [MF]sequence-specific DNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0071011 [CC]precatalytic spliceosomeprobableGO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681
GO:0071013 [CC]catalytic step 2 spliceosomeprobableGO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681
GO:2000112 [BP]regulation of cellular macromolecule biosynthetic processprobableGO:0009889, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0050794, GO:0010556, GO:0065007, GO:0008150, GO:0050789
GO:0000785 [CC]chromatinprobableGO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0044427, GO:0005694, GO:0043226, GO:0044422
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0051252 [BP]regulation of RNA metabolic processprobableGO:0080090, GO:0019222, GO:0060255, GO:0031323, GO:0050794, GO:0019219, GO:0065007, GO:0051171, GO:0008150, GO:0050789
GO:0035062 [CC]omega speckleprobableGO:0016607, GO:0044446, GO:0016604, GO:0043231, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0005654, GO:0070013, GO:0043229, GO:0044428, GO:0031974, GO:0005575, GO:0044424, GO:0044451, GO:0043227, GO:0043226, GO:0044422
GO:0005703 [CC]polytene chromosome puffprobableGO:0005575, GO:0043232, GO:0044464, GO:0005700, GO:0005622, GO:0044446, GO:0043229, GO:0043228, GO:0005623, GO:0044424, GO:0044427, GO:0005694, GO:0043226, GO:0044422
GO:0010468 [BP]regulation of gene expressionprobableGO:0060255, GO:0008150, GO:0065007, GO:0050789, GO:0019222
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0003723 [MF]RNA bindingprobableGO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1L3K, chain A
Confidence level:very confident
Coverage over the Query: 183-262,387-412,443-495
View the alignment between query and template
View the model in PyMOL
Template: 1L3K, chain A
Confidence level:very confident
Coverage over the Query: 99-261
View the alignment between query and template
View the model in PyMOL
Template: 2RS2, chain A
Confidence level:very confident
Coverage over the Query: 594-657
View the alignment between query and template
View the model in PyMOL
Template: 1QM9, chain A
Confidence level:confident
Coverage over the Query: 390-412,443-522,533-567,583-659
View the alignment between query and template
View the model in PyMOL