Psyllid ID: psy15971


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
MSRTHEIPTSSTTVTISPEPETETDSLGQVVVKLKKPETKKVVKWTENTIDNEHMNKRKSKCCCIYKKPKANFDESSSDSSDDECENCFGHVEAKKANRQTKPDEPMASQ
cccccccccccEEEEEccccccccccccEEEEEccccccccEEEEccccccccccccccccEEEEEccccccccccccccccccccccccccHHHHcccccccccccccc
cccccccccccEEEEEccccccccccccEEEEEEcccccccEEEEccccEcccccccccccEEEEEEccccccccccccccccccccccccccHcccccccccccccccc
msrtheiptssttvtispepetetdsLGQVVVKLKKPETKKVVKWTENTidnehmnkrkskccciykkpkanfdesssdssddecencfghveakkanrqtkpdepmasq
msrtheiptssttvtispepetetdslgqvvvklkkpetkkvvkwtentidnehmnkrkskcCCIYKKPKanfdesssdssDDECENCFGHVeakkanrqtkpdepmasq
MSRTHeiptssttvtispepetetDSLGQvvvklkkpetkkvvkWTENTIDNEHMNKRKSKCCCIYKKPKANFdesssdssddeCENCFGHVEAKKANRQTKPDEPMASQ
******************************VV********KVVKWTENTIDN*****RKSKCCCIYK*******************************************
************************************************TIDNEHMNKRKSKCCCI*********************************************
***************************GQVVVKLKKPETKKVVKWTENTIDNEHMNKRKSKCCCIYKKPKA**************ENCFGHVEAKK**************
***********TTVTISP**ETETDSLGQVVVKLKKPETKKVVKWTENTIDNEHMNKRKSKCCCIYKKPK****************************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSRTHEIPTSSTTVTISPEPETETDSLGQVVVKLKKPETKKVVKWTENTIDNEHMNKRKSKCCCIYKKPKANFDESSSDSSDDECENCFGHVEAKKANRQTKPDEPMASQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query110 2.2.26 [Sep-21-2011]
Q568K2122 Protein phosphatase 1 reg yes N/A 0.827 0.745 0.425 7e-15
Q7YR30126 Protein phosphatase 1 reg yes N/A 0.645 0.563 0.479 4e-10
Q5TM51126 Protein phosphatase 1 reg yes N/A 0.645 0.563 0.479 4e-10
O60927126 Protein phosphatase 1 reg yes N/A 0.645 0.563 0.479 4e-10
Q09384109 Uncharacterized protein Z no N/A 0.618 0.623 0.411 5e-10
Q6MFY6127 Protein phosphatase 1 reg yes N/A 0.645 0.559 0.479 1e-09
Q750F0151 Type 1 phosphatases regul yes N/A 0.645 0.470 0.431 1e-09
Q8K1L5131 Protein phosphatase 1 reg yes N/A 0.381 0.320 0.547 4e-09
Q6GLB0119 Protein phosphatase 1 reg yes N/A 0.527 0.487 0.459 6e-08
O14218104 Type 1 phosphatases regul yes N/A 0.590 0.625 0.478 7e-08
>sp|Q568K2|PP1RB_DANRE Protein phosphatase 1 regulatory subunit 11 OS=Danio rerio GN=ppp1r11 PE=1 SV=1 Back     alignment and function desciption
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 64/108 (59%), Gaps = 17/108 (15%)

Query: 6   EIP-TSSTTVT------ISPEPETETDSLGQVVVKLKKPETKKVVKWTENTIDNEHMNKR 58
           E+P TSS T+T        P P+ E  SL    +KL+K +T+K V+W+ +T+DNEH+ +R
Sbjct: 3   EVPGTSSETITETVQTGTPPPPQQEGRSL---TIKLRKRKTEKKVEWSSDTVDNEHLGRR 59

Query: 59  KSKCCCIYKKPKANFDESSSDSSDDECENC------FGHVEAKKANRQ 100
            SKCCCIY+KP+  F ESSS+S  D+ E C       GH       R+
Sbjct: 60  SSKCCCIYEKPR-QFGESSSESEGDDEEGCGSAHCILGHGRRGHGQRE 106




Inhibitor of protein phosphatase 1.
Danio rerio (taxid: 7955)
>sp|Q7YR30|PP1RB_PANTR Protein phosphatase 1 regulatory subunit 11 OS=Pan troglodytes GN=PPP1R11 PE=3 SV=1 Back     alignment and function description
>sp|Q5TM51|PP1RB_MACMU Protein phosphatase 1 regulatory subunit 11 OS=Macaca mulatta GN=PPP1R11 PE=3 SV=1 Back     alignment and function description
>sp|O60927|PP1RB_HUMAN Protein phosphatase 1 regulatory subunit 11 OS=Homo sapiens GN=PPP1R11 PE=1 SV=1 Back     alignment and function description
>sp|Q09384|YS88_CAEEL Uncharacterized protein ZK945.8 OS=Caenorhabditis elegans GN=ZK945.8 PE=4 SV=1 Back     alignment and function description
>sp|Q6MFY6|PP1RB_RAT Protein phosphatase 1 regulatory subunit 11 OS=Rattus norvegicus GN=Ppp1r11 PE=2 SV=2 Back     alignment and function description
>sp|Q750F0|YPI1_ASHGO Type 1 phosphatases regulator YPI1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YPI1 PE=3 SV=1 Back     alignment and function description
>sp|Q8K1L5|PP1RB_MOUSE Protein phosphatase 1 regulatory subunit 11 OS=Mus musculus GN=Ppp1r11 PE=1 SV=1 Back     alignment and function description
>sp|Q6GLB0|PP1RB_XENTR Protein phosphatase 1 regulatory subunit 11 OS=Xenopus tropicalis GN=ppp1r11 PE=3 SV=1 Back     alignment and function description
>sp|O14218|YPI1_SCHPO Type 1 phosphatases regulator ypi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ypi1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query110
189237259138 PREDICTED: similar to K10H10.7 [Triboliu 0.654 0.521 0.648 1e-18
241265292125 protein phosphatase 1 regulatory subunit 0.727 0.64 0.517 4e-17
242001274160 conserved hypothetical protein [Ixodes s 0.727 0.5 0.528 1e-16
195115499159 GI17309 [Drosophila mojavensis] gi|19391 0.672 0.465 0.552 5e-16
195385531151 GJ15772 [Drosophila virilis] gi|19414791 0.681 0.496 0.519 6e-15
195346045139 GM22654 [Drosophila sechellia] gi|194134 0.6 0.474 0.588 9e-15
195146492156 GL19060 [Drosophila persimilis] gi|19410 0.590 0.416 0.582 1e-14
195030312150 GH10799 [Drosophila grimshawi] gi|193904 0.563 0.413 0.609 1e-14
198475876156 GA12683 [Drosophila pseudoobscura pseudo 0.590 0.416 0.582 1e-14
198469522 217 GA10854 [Drosophila pseudoobscura pseudo 0.527 0.267 0.633 2e-14
>gi|189237259|ref|XP_001812086.1| PREDICTED: similar to K10H10.7 [Tribolium castaneum] gi|270007146|gb|EFA03594.1| hypothetical protein TcasGA2_TC013677 [Tribolium castaneum] Back     alignment and taxonomy information
 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 60/74 (81%), Gaps = 2/74 (2%)

Query: 32  VKLKKPETKKVVKWTENTIDNEHMNKRKSKCCCIYKKPKANFDESSS-DSSDDECENCFG 90
           ++L KP++ + V+WT  T+DNEHMNK+KSKCCCIYKKP+ NFDESSS + SDDECE+C G
Sbjct: 43  LRLTKPKSDRKVEWTTETVDNEHMNKKKSKCCCIYKKPR-NFDESSSEEGSDDECEHCKG 101

Query: 91  HVEAKKANRQTKPD 104
           HVE KK   QT+ D
Sbjct: 102 HVEKKKKRHQTQDD 115




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241265292|ref|XP_002405998.1| protein phosphatase 1 regulatory subunit, putative [Ixodes scapularis] gi|215496848|gb|EEC06488.1| protein phosphatase 1 regulatory subunit, putative [Ixodes scapularis] Back     alignment and taxonomy information
>gi|242001274|ref|XP_002435280.1| conserved hypothetical protein [Ixodes scapularis] gi|215498610|gb|EEC08104.1| conserved hypothetical protein [Ixodes scapularis] Back     alignment and taxonomy information
>gi|195115499|ref|XP_002002294.1| GI17309 [Drosophila mojavensis] gi|193912869|gb|EDW11736.1| GI17309 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195385531|ref|XP_002051458.1| GJ15772 [Drosophila virilis] gi|194147915|gb|EDW63613.1| GJ15772 [Drosophila virilis] Back     alignment and taxonomy information
>gi|195346045|ref|XP_002039579.1| GM22654 [Drosophila sechellia] gi|194134805|gb|EDW56321.1| GM22654 [Drosophila sechellia] Back     alignment and taxonomy information
>gi|195146492|ref|XP_002014218.1| GL19060 [Drosophila persimilis] gi|194106171|gb|EDW28214.1| GL19060 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|195030312|ref|XP_001988012.1| GH10799 [Drosophila grimshawi] gi|193904012|gb|EDW02879.1| GH10799 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|198475876|ref|XP_001357187.2| GA12683 [Drosophila pseudoobscura pseudoobscura] gi|198137447|gb|EAL34255.2| GA12683 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|198469522|ref|XP_001355047.2| GA10854 [Drosophila pseudoobscura pseudoobscura] gi|198146910|gb|EAL32103.2| GA10854 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query110
FB|FBgn0261624215 I-3 "Inhibitor-3" [Drosophila 0.463 0.237 0.547 3.5e-11
FB|FBgn0031772164 CG13994 [Drosophila melanogast 0.427 0.286 0.551 2e-10
WB|WBGene00015579107 C07H6.2 [Caenorhabditis elegan 0.5 0.514 0.516 2e-10
UNIPROTKB|O60927126 PPP1R11 "Protein phosphatase 1 0.490 0.428 0.446 1.1e-09
RGD|1303163127 Ppp1r11 "protein phosphatase 1 0.545 0.472 0.412 1.1e-09
MGI|MGI:1923747131 Ppp1r11 "protein phosphatase 1 0.545 0.458 0.396 7.6e-09
GENEDB_PFALCIPARUM|PF10_0311116 PF10_0311 "protein phosphatase 0.545 0.517 0.419 2.3e-07
UNIPROTKB|Q8IJ88116 PF10_0311 "Protein phosphatase 0.545 0.517 0.419 2.3e-07
ZFIN|ZDB-GENE-050417-99122 ppp1r11 "protein phosphatase 1 0.236 0.213 0.615 2.9e-07
CGD|CAL0003894147 orf19.7250 [Candida albicans ( 0.254 0.190 0.620 1.3e-06
FB|FBgn0261624 I-3 "Inhibitor-3" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 29/53 (54%), Positives = 33/53 (62%)

Query:    50 IDNEHMNKRKSKCCCIYKKPKANFXXXXXXXXXXXCENCFGHVEAKKANRQTK 102
             IDNEHMN+RKSKCCCIY+KP   F           CE+CFGH E +  NR  K
Sbjct:    80 IDNEHMNRRKSKCCCIYRKPHP-FGESSSSTDDE-CEHCFGHPEVRTRNRLEK 130




GO:0008157 "protein phosphatase 1 binding" evidence=IPI
FB|FBgn0031772 CG13994 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00015579 C07H6.2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|O60927 PPP1R11 "Protein phosphatase 1 regulatory subunit 11" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1303163 Ppp1r11 "protein phosphatase 1, regulatory (inhibitor) subunit 11" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1923747 Ppp1r11 "protein phosphatase 1, regulatory (inhibitor) subunit 11" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PF10_0311 PF10_0311 "protein phosphatase inhibitor, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IJ88 PF10_0311 "Protein phosphatase inhibitor, putative" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050417-99 ppp1r11 "protein phosphatase 1, regulatory (inhibitor) subunit 11" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
CGD|CAL0003894 orf19.7250 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q568K2PP1RB_DANRENo assigned EC number0.42590.82720.7459yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query110
pfam0749158 pfam07491, PPI_Ypi1, Protein phosphatase inhibitor 2e-18
>gnl|CDD|219428 pfam07491, PPI_Ypi1, Protein phosphatase inhibitor Back     alignment and domain information
 Score = 71.9 bits (177), Expect = 2e-18
 Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 1/49 (2%)

Query: 35 KKPETKKVVKWTENTIDNEHMNKRKSKCCCIYKKPKANFDESSSDSSDD 83
          K  +TK+ V+WTE+ +DNEHMNK+KSK CCI+ KP+  FDESSSDS   
Sbjct: 9  KSKKTKRRVRWTEDVVDNEHMNKKKSKICCIFHKPR-PFDESSSDSDSS 56


These proteins include Ypi1, , a novel Saccharomyces cerevisiae type 1 protein phosphatase inhibitor and ppp1r11/hcgv, annotated as having protein phosphatase inhibitor activity. Length = 58

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 110
KOG4102|consensus121 100.0
PF0749160 PPI_Ypi1: Protein phosphatase inhibitor ; InterPro 99.97
>KOG4102|consensus Back     alignment and domain information
Probab=100.00  E-value=8.5e-39  Score=234.43  Aligned_cols=94  Identities=47%  Similarity=0.910  Sum_probs=78.6

Q ss_pred             CCCCceEEeCCCCCCcCCCCceEEEeecCCCCCCceeecCCccccccCCccccceeeeecCCCCCCCCCCCC-CCccccc
Q psy15971          8 PTSSTTVTISPEPETETDSLGQVVVKLKKPETKKVVKWTENTIDNEHMNKRKSKCCCIYKKPKANFDESSSD-SSDDECE   86 (110)
Q Consensus         8 p~sS~t~t~~~~p~~~~~~~~~l~Lrl~~~~~~~~V~W~edvVDNE~mgrkkSK~CCIyhKpr~~f~ESSse-~sddec~   86 (110)
                      +++++|+++..+++  ......|.|||+.+...++|+|.++|||||||||||||||||||||| +|||||++ ++|.+|+
T Consensus        12 ~~~T~T~~v~e~~a--~~~~~~lvlrL~~~~~~r~V~W~~~vVDNEhMgrkKSKcCCIy~kpr-~~~esSs~ed~d~~t~   88 (121)
T KOG4102|consen   12 SVGTTTVVVTEEPA--QLEAEQLVLRLRPPPPERRVRWTEGVVDNEHMGRKKSKCCCIYHKPR-AFDESSSDEDDDSETE   88 (121)
T ss_pred             ccceEEEEeecCcc--hhccccccccccCCCCCCceeeeccccccccccccccceeEEEeCcc-ccCccccCCcccccCc
Confidence            44444444444444  44458899999988889999999999999999999999999999999 99999986 5777899


Q ss_pred             CCCCchhhhhhcCCCCCC
Q psy15971         87 NCFGHVEAKKANRQTKPD  104 (110)
Q Consensus        87 ~c~gh~~~~~~~~~~~~~  104 (110)
                      ||+||+++++++++...+
T Consensus        89 hcrgh~~~~~~~~p~~~~  106 (121)
T KOG4102|consen   89 HCRGHTEKRKNAKPNGPE  106 (121)
T ss_pred             ccccccchhhccCCCCCC
Confidence            999999999888877763



>PF07491 PPI_Ypi1: Protein phosphatase inhibitor ; InterPro: IPR011107 These proteins include Ypi1, a novel Saccharomyces cerevisiae type 1 protein phosphatase inhibitor [] and ppp1r11/hcgv (O60927 from SWISSPROT), annotated as having protein phosphatase inhibitor activity [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00