Diaphorina citri psyllid: psy1607


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-
MCDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILVQSQ
cccccccccccccccCCcccCEEcccccccEEEEEcccccEEEEEccccEEEECccccccccccccccccccccEEEcccccccEEEEEcccccEEEEEccccEEEEEcccccccccccccccCCcccEECcccccccccccEEEEEEcccccEEEEEccccEEEECcccccccccccccccCEEEECcccccccccccEEEEEcccccEEEEEccccccccccEEEEEccccccCECccc
MCDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNS*******
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MCDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILVQSQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0050789 [BP]regulation of biological processprobableGO:0008150, GO:0065007
GO:0000790 [CC]nuclear chromatinprobableGO:0031974, GO:0043229, GO:0043228, GO:0000785, GO:0000228, GO:0043227, GO:0043226, GO:0044446, GO:0031981, GO:0005634, GO:0044454, GO:0005694, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044428, GO:0044424, GO:0044427, GO:0044422
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0044237 [BP]cellular metabolic processprobableGO:0009987, GO:0008150, GO:0008152
GO:0003824 [MF]catalytic activityprobableGO:0003674
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0071704 [BP]organic substance metabolic processprobableGO:0008150, GO:0008152
GO:0044238 [BP]primary metabolic processprobableGO:0008150, GO:0008152
GO:0031965 [CC]nuclear membraneprobableGO:0005575, GO:0005635, GO:0031090, GO:0005634, GO:0016020, GO:0044464, GO:0031967, GO:0031975, GO:0044446, GO:0043229, GO:0044428, GO:0012505, GO:0044424, GO:0005623, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0043231

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MVD, chain K
Confidence level:very confident
Coverage over the Query: 5-240
View the alignment between query and template
View the model in PyMOL