Diaphorina citri psyllid: psy16118
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| Structural maintenance of chromosomes protein 1A | Involved in chromosome cohesion during cell cycle and in DNA repair. Central component of cohesin complex. The cohesin complex is required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. The cohesin complex may also play a role in spindle pole assembly during mitosis. Involved in DNA repair via its interaction with BRCA1 and its related phosphorylation by ATM, or via its phosphorylation by ATR. Works as a downstream effector both in the ATM/NBS1 branch and in the ATR/MSH2 branch of S-phase checkpoint. | confident | Q9Z1M9 |
| Structural maintenance of chromosomes protein 1A | Involved in chromosome cohesion during cell cycle and in DNA repair. Involved in DNA repair via its interaction with BRCA1 and its related phosphorylation by ATM, and works as a downstream effector in the ATM/NBS1 branch of S-phase checkpoint (By similarity). Central component of cohesin complex. The cohesin complex is required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. The cohesin complex may also play a role in spindle pole assembly during mitosis. Involved in DNA repair via its interaction with BRCA1 and its related phosphorylation by ATM, or via its phosphorylation by ATR. Works as a downstream effector both in the ATM/NBS1 branch and in the ATR/MSH2 branch of S-phase checkpoint. | confident | O97593 |
| Structural maintenance of chromosomes protein 1A | Involved in chromosome cohesion during cell cycle and in DNA repair. Involved in DNA repair via its interaction with BRCA1 and its related phosphorylation by ATM, and works as a downstream effector in the ATM/NBS1 branch of S-phase checkpoint (By similarity). Central component of cohesin complex. The cohesin complex is required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. The cohesin complex may also play a role in spindle pole assembly during mitosis. Involved in DNA repair via its interaction with BRCA1 and its related phosphorylation by ATM, or via its phosphorylation by ATR. Works as a downstream effector both in the ATM/NBS1 branch and in the ATR/MSH2 branch of S-phase checkpoint. | confident | Q9CU62 |
Prediction of Gene Ontology Terms
| GO Term | Description | Confidence Level | Parent GO Terms |
| GO:0000785 [CC] | chromatin | probable | GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0044427, GO:0005694, GO:0043226, GO:0044422 |
| GO:0003677 [MF] | DNA binding | probable | GO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488 |
| GO:0005737 [CC] | cytoplasm | probable | GO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622 |
| GO:0030893 [CC] | meiotic cohesin complex | probable | GO:0043234, GO:0005575, GO:0005622, GO:0032991, GO:0043232, GO:0044464, GO:0005623, GO:0043226, GO:0044446, GO:0000793, GO:0043229, GO:0043228, GO:0044424, GO:0044427, GO:0005694, GO:0008278, GO:0044422 |
| GO:0044454 [CC] | nuclear chromosome part | probable | GO:0031974, GO:0043229, GO:0043228, GO:0000228, GO:0043227, GO:0043226, GO:0044446, GO:0031981, GO:0005634, GO:0005694, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044428, GO:0044424, GO:0044427, GO:0044422 |
Prediction of Enzyme Commission Number
No EC number assigned to the protein, probably not an enzyme!
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 1I84, chain S Confidence level:very confident Coverage over the Query: 110-146 View the alignment between query and template View the model in PyMOL |
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Template: 2WD5, chain A Confidence level:very confident Coverage over the Query: 450-629 View the alignment between query and template View the model in PyMOL |
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Template: 1W1W, chain A Confidence level:very confident Coverage over the Query: 918-940,953-1065 View the alignment between query and template View the model in PyMOL |
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Template: 1W1W, chain A Confidence level:very confident Coverage over the Query: 3-38 View the alignment between query and template View the model in PyMOL |
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Template: 2FXO, chain A Confidence level:probable Coverage over the Query: 109-226 View the alignment between query and template View the model in PyMOL |
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Template: 3GHG, chain A Confidence level:probable Coverage over the Query: 763-869 View the alignment between query and template View the model in PyMOL |
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Template: 3U1C, chain A Confidence level:probable Coverage over the Query: 339-418 View the alignment between query and template View the model in PyMOL |
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Template: 1SJJ, chain A Confidence level:probable Coverage over the Query: 38-434 View the alignment between query and template View the model in PyMOL |
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Template: 2XS1, chain A Confidence level:probable Coverage over the Query: 69-461 View the alignment between query and template View the model in PyMOL |
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Template: 1QZV, chain F Confidence level:probable Coverage over the Query: 693-708 View the alignment between query and template View the model in PyMOL |