Diaphorina citri psyllid: psy16152

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQYDFYTNEMWRADKSKSLTSAGEAFVNELYSKRDEYIANPQCNLQHGI
ccccccccHHHHHHHHHHHccccccccEEEEEccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHHHHcccccEEEEEEEccccHHHHHHHHHHHHHHHHccccccccccHHHHHccccccccccccEEEccccccHHHHHHHHHHcccEEEEcccccccccHHHHHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
*SWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQYDFYTNEMWRADK***LTSAGEAFVNELYSKRDEYI****C******
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MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLxxxxxxxxxxxxxxxxxxxxxGIRIRIIGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQYDFYTNEMWRADKSKSLTSAGEAFVNELYSKRDEYIANPQCNLQHGI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Isoprenyl transferase Generates ditrans,octacis-undecaprenyl pyrophosphate (UPP) from isopentenyl pyrophosphate (IPP) and farnesyl diphosphate. UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.confidentQ5SH15
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) Generates tritrans,heptacis-undecaprenyl diphosphate from isopentenyl pyrophosphate (IPP) and geranylgeranyl diphosphate. It is probably the precursor of glycosyl carrier lipids.confidentQ8U0I8
Dehydrodolichyl diphosphate synthase 6 Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein.confidentQ8S2T1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0019408 [BP]dolichol biosynthetic processprobableGO:0016093, GO:0016094, GO:0044249, GO:0044281, GO:0044283, GO:1901576, GO:0044710, GO:0044711, GO:0071704, GO:0006629, GO:0006720, GO:0046165, GO:0009987, GO:0009058, GO:0008150, GO:0008152, GO:0044255, GO:0008610, GO:0044238, GO:0044237, GO:0006066, GO:0008299, GO:0019348, GO:1901617, GO:1901615
GO:0000287 [MF]magnesium ion bindingprobableGO:0043169, GO:0046872, GO:0003674, GO:0005488, GO:0043167
GO:0033850 [MF]Z-farnesyl diphosphate synthase activityprobableGO:0016765, GO:0016740, GO:0003674, GO:0003824
GO:0045547 [MF]dehydrodolichyl diphosphate synthase activityprobableGO:0016765, GO:0016740, GO:0003674, GO:0004659, GO:0003824
GO:0006911 [BP]phagocytosis, engulfmentprobableGO:0009987, GO:0006909, GO:0016192, GO:0016044, GO:0071840, GO:0006810, GO:0010324, GO:0008150, GO:0061024, GO:0044765, GO:0044763, GO:0016043, GO:0006897, GO:0051234, GO:0051179, GO:0044699
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0050347 [MF]trans-octaprenyltranstransferase activityprobableGO:0016765, GO:0016740, GO:0003674, GO:0003824
GO:0006888 [BP]ER to Golgi vesicle-mediated transportprobableGO:0051234, GO:0016192, GO:0046907, GO:0048193, GO:0006810, GO:0044765, GO:0008150, GO:0051649, GO:0044763, GO:0009987, GO:0051641, GO:0051179, GO:0044699, GO:0016482
GO:0030145 [MF]manganese ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0008834 [MF]di-trans,poly-cis-decaprenylcistransferase activityprobableGO:0016765, GO:0016740, GO:0003674, GO:0004659, GO:0003824
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0050908 [BP]detection of light stimulus involved in visual perceptionprobableGO:0009582, GO:0009581, GO:0050962, GO:0009583, GO:0009584, GO:0051606, GO:0009605, GO:0009628, GO:0050877, GO:0050896, GO:0007601, GO:0007600, GO:0050953, GO:0008150, GO:0032501, GO:0050906, GO:0009314, GO:0009416, GO:0044707, GO:0044699, GO:0003008
GO:0042462 [BP]eye photoreceptor cell developmentprobableGO:0032502, GO:0044707, GO:0030154, GO:0048468, GO:0009653, GO:0007275, GO:0044699, GO:0042461, GO:0048869, GO:0008150, GO:0048513, GO:0048666, GO:0009887, GO:0032501, GO:0030182, GO:0048592, GO:0009987, GO:0044767, GO:0044763, GO:0048731, GO:0001754, GO:0022008, GO:0048699, GO:0007399, GO:0007423, GO:0048856, GO:0046530, GO:0001654
GO:0006486 [BP]protein glycosylationprobableGO:0044249, GO:0034645, GO:0009100, GO:0009101, GO:0044267, GO:0044260, GO:0071704, GO:1901576, GO:0009987, GO:0070085, GO:0006464, GO:0009058, GO:0036211, GO:0008150, GO:0008152, GO:0044723, GO:0009059, GO:0044238, GO:0005975, GO:1901137, GO:1901135, GO:0043412, GO:0044237, GO:0043170, GO:0019538, GO:0043413
GO:0002094 [MF]polyprenyltransferase activityprobableGO:0016765, GO:0016740, GO:0003674, GO:0004659, GO:0003824
GO:0009507 [CC]chloroplastprobableGO:0005737, GO:0009536, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.5.-.-Transferring alkyl or aryl groups, other than methyl groups.probable
2.5.1.-5,10-methenyltetrahydromethanopterin hydrogenase.probable
2.5.1.31diphosphate specific).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1F75, chain A
Confidence level:very confident
Coverage over the Query: 20-78,91-250
View the alignment between query and template
View the model in PyMOL