Diaphorina citri psyllid: psy16201

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK
cccccccccccccccHHHcccccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccCEEEEcccHHHHHHHHHHHHcccccEEEEEcccccccccccHHHHHccccCEECccCEEEEEcHHHHHccccccEEEEEccccHHHHHHccccc
***********VFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTR******
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Dihydropyrimidine dehydrogenase [NADP(+)] Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine.confidentQ5R895
Dihydropyrimidine dehydrogenase [NADP(+)] Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine.confidentQ6NYG8
Dihydropyrimidine dehydrogenase [NADP(+)] Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine.confidentQ28943

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0050661 [MF]NADP bindingconfidentGO:0050662, GO:0097159, GO:0000166, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:1901363, GO:1901265
GO:0007623 [BP]circadian rhythmprobableGO:0048511, GO:0008150
GO:0006214 [BP]thymidine catabolic processprobableGO:0008152, GO:0044248, GO:0072529, GO:0009164, GO:0006807, GO:0044237, GO:0046135, GO:0009120, GO:1901360, GO:0072527, GO:0006139, GO:1901575, GO:0071704, GO:1901361, GO:0044281, GO:0009987, GO:0006725, GO:0044710, GO:0046700, GO:0046121, GO:0046127, GO:0009116, GO:0046125, GO:0034655, GO:0009056, GO:0046104, GO:0055086, GO:0046483, GO:0044238, GO:1901564, GO:0044270, GO:1901136, GO:1901135, GO:0034641, GO:0006213, GO:1901657, GO:0019439, GO:0008150, GO:1901658, GO:1901565
GO:0006210 [BP]thymine catabolic processprobableGO:0044248, GO:0072529, GO:0034641, GO:0006807, GO:0044281, GO:0046113, GO:1901360, GO:0072527, GO:0006139, GO:1901575, GO:0006208, GO:0006206, GO:0019859, GO:0071704, GO:1901361, GO:0009987, GO:0006725, GO:0044710, GO:0046700, GO:0009112, GO:0008150, GO:0008152, GO:0009056, GO:0055086, GO:0046483, GO:0044238, GO:1901564, GO:0044270, GO:0044237, GO:1901565
GO:0006212 [BP]uracil catabolic processprobableGO:0044248, GO:0072529, GO:0034641, GO:0006807, GO:0044281, GO:0046113, GO:1901360, GO:0072527, GO:0006139, GO:1901575, GO:0006208, GO:0006206, GO:0071704, GO:1901361, GO:0009987, GO:0006725, GO:0044710, GO:0046700, GO:0009112, GO:0008150, GO:0008152, GO:0009056, GO:0055086, GO:0046483, GO:0044238, GO:1901564, GO:0044270, GO:0019860, GO:0044237, GO:1901565
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0006145 [BP]purine nucleobase catabolic processprobableGO:0044248, GO:0034641, GO:0006807, GO:0044281, GO:0046113, GO:0072521, GO:0072523, GO:1901360, GO:1901361, GO:0006139, GO:1901575, GO:0071704, GO:0009987, GO:0006725, GO:0044710, GO:0046700, GO:0009112, GO:0008150, GO:0008152, GO:0009056, GO:0055086, GO:0046483, GO:0044238, GO:1901564, GO:0044270, GO:0044237, GO:0019439, GO:0006144, GO:1901565
GO:0042493 [BP]response to drugprobableGO:0042221, GO:0050896, GO:0008150
GO:0050660 [MF]flavin adenine dinucleotide bindingprobableGO:0043168, GO:0050662, GO:0097159, GO:0043167, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:0000166, GO:1901363, GO:1901265
GO:0010181 [MF]FMN bindingprobableGO:0043168, GO:0050662, GO:0097159, GO:0000166, GO:0036094, GO:0048037, GO:1901265, GO:0003674, GO:0043167, GO:1901363, GO:0032553, GO:0005488
GO:0007584 [BP]response to nutrientprobableGO:0009991, GO:0009605, GO:0050896, GO:0031667, GO:0008150, GO:0042221
GO:0002058 [MF]uracil bindingprobableGO:0097159, GO:0036094, GO:0003674, GO:0005488, GO:0002054, GO:0002061, GO:1901363
GO:0055114 [BP]oxidation-reduction processprobableGO:0044710, GO:0008150, GO:0008152
GO:0046872 [MF]metal ion bindingprobableGO:0043169, GO:0003674, GO:0005488, GO:0043167
GO:0019483 [BP]beta-alanine biosynthetic processprobableGO:0019752, GO:0044249, GO:0006807, GO:0044281, GO:0044283, GO:1901576, GO:0044710, GO:0044711, GO:0006520, GO:0071704, GO:0044238, GO:0009987, GO:0019482, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0008652, GO:1901564, GO:1901566, GO:0006082, GO:0046394, GO:0016053, GO:0044237
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0004158 [MF]dihydroorotate oxidase activityprobableGO:0016627, GO:0016635, GO:0003824, GO:0003674, GO:0004152, GO:0016634, GO:0016491
GO:0004159 [MF]dihydrouracil dehydrogenase (NAD+) activityprobableGO:0003824, GO:0016627, GO:0003674, GO:0016628, GO:0016491
GO:0009055 [MF]electron carrier activityprobableGO:0003674
GO:0051539 [MF]4 iron, 4 sulfur cluster bindingprobableGO:0051536, GO:0003674, GO:0051540, GO:0005488
GO:0006222 [BP]UMP biosynthetic processprobableGO:0044238, GO:0055086, GO:0008152, GO:0009218, GO:0044237, GO:0072528, GO:0044249, GO:0034641, GO:0009165, GO:0006807, GO:0009163, GO:0009161, GO:0046134, GO:0009123, GO:1901362, GO:0009259, GO:0046132, GO:0072527, GO:0006220, GO:0006221, GO:0044710, GO:1901360, GO:0046131, GO:0008150, GO:0071704, GO:0009124, GO:0044281, GO:0018130, GO:0009987, GO:0006139, GO:0046049, GO:0009156, GO:0006793, GO:0006725, GO:0009220, GO:0009260, GO:0009058, GO:0009117, GO:0009116, GO:0009173, GO:0019438, GO:0034654, GO:0009130, GO:0009119, GO:0090407, GO:0042455, GO:0046483, GO:1901564, GO:0044271, GO:1901566, GO:0009174, GO:1901137, GO:1901135, GO:0046390, GO:0006213, GO:1901657, GO:0006796, GO:0009129, GO:1901293, GO:1901576, GO:0019637, GO:0019693, GO:0006753, GO:1901659
GO:0051384 [BP]response to glucocorticoid stimulusprobableGO:0009719, GO:0033993, GO:0031960, GO:0050896, GO:0008150, GO:0048545, GO:0009725, GO:0042221, GO:0010033, GO:0014070
GO:0006207 [BP]'de novo' pyrimidine nucleobase biosynthetic processprobableGO:0072528, GO:0044249, GO:0034641, GO:0006807, GO:0044281, GO:0046112, GO:1901362, GO:1901360, GO:0072527, GO:1901576, GO:0044710, GO:0019856, GO:0006206, GO:0071704, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009112, GO:0009058, GO:0008150, GO:0008152, GO:1901564, GO:0055086, GO:0046483, GO:0044238, GO:0044271, GO:1901566, GO:0044237

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GTE, chain A
Confidence level:very confident
Coverage over the Query: 16-228
View the alignment between query and template
View the model in PyMOL