Diaphorina citri psyllid: psy16204

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------
MDLTFSRLPFYYSTASPNPGLNHMARLMDSLILDSFSPFSFTKITTTRRPVRMNANNTRRQQSKQQHVTPQMLYRAKSQATYQEEKKPSANKEPDSIADRWINSLRKRDPEIQPTLPAIIPSRSRSCSHPTTLKKTTRSFGSNTSASSTKKERKLGFKPAVKKIIAANASENSVSHEANEKDGVFRQDIREKIFYSTGFEPSLIETLEKDILQNNPNVQWNKVAGLTEAKAILQEAMVLPTIMPEFFKEALERHSHGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMVSFLVGLHSNKTFYLVGVLNGEPTTTFAYNKQILQMNRRVLKGALTTAPTRAENQESGPSIFSVMVDGLGKGPWSMVAVVATHFTWGKKGTCQSHEGHSGRINKNSLFQARCYAPSTIFIDEVDSLCSMRGSDSEHEASRRFKAELLIQMDGLNSSLYEDKIIMILAATNHPYQLLTLCLEGVVIDVNLDFHKISKMLEGYTGSDIANLARDAAMMSIRRKIMGQTPAQIKEIKQEDIDLPVTEKDFREAIARCRKSVTAHDLSKYDSWMNEFGSH
ccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccHHHHHHHHcccccccccccccccccccHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHcccEEEEECcccccccccccHHHHHHHHHHHHHHHHcccccccHHHcccccccccEEEEEcccccccccccccccccccccccccccccccHHHHcccccccccccEEEEEEccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHccc
*****SR****YSTA****GLN****LMDSLILDSFSPFSFTKIT******************************************************************************************************************************************VFRQDIREKIFYSTGFEPSLIETLEKDILQNNPNVQWNKVAGLTEAKAILQEAMVLPTIMPEFFKEALERHSHGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMVSFLVGLHSNKTFYLVGVLNGEPTTTFAYNKQILQMNRRVLKGALT**************IFSVMVDGLGKGPWSMVAVVATHFTWGKKGT*******SGRINKNSLFQARCYAPSTIFIDEVDSLCSMRGS*S*HEASRRFKAELLIQMDGLNSSLYEDKIIMILAATNHPYQLLTLCLEGVVIDVNLDFHKISKMLEGYTGSDIANLARDAAMMSIRRKIMG*****I**I***DIDLPVTEKDFREAIARCRKSVTAHDLSKYDSWMNEFG**
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MDLTFSRLPFYYSTASPNPGLNHMARLMDSLILDSFSPFSFTKITTTRRPVRMNANNTRRQQSKQQHVTPQMLYRAKSQATYQEEKKPSANKEPDSIADRWINSLRKRDPEIQPTLPAIIPSRSRSCSHPTTLKKTTRSFGSNTSASSTKKERKLGFKPAVKKIIAANASENSVSHEANEKDGVFRQDIREKIFYSTGFEPSLIETLEKDILQNNPNVQWNKVAGLTEAKAILQEAMVLPTIMPEFFKEALERHSHGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMVSFLVGLHSNKTFYLVGVLNGEPTTTFAYNKQILQMNRRVLKGALTTAPTRAENQESGPSIFSVMVDGLGKGPWSMVAVVATHFTWGKKGTCQSHEGHSGRINKNSLFQARCYAPSTIFIDEVDSLCSMRGSDSEHEASRRFKAELLIQMDGLNSSLYEDKIIMILAATNHPYQLLTLCLEGVVIDVNLDFHKISKMLEGYTGSDIANLARDAAMMSIRRKIMGQTPAQIKEIKQEDIDLPVTEKDFREAIARCRKSVTAHDLSKYDSWMNEFGSH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005813 [CC]centrosomeprobableGO:0005856, GO:0005575, GO:0015630, GO:0043232, GO:0044464, GO:0005623, GO:0005815, GO:0044446, GO:0043229, GO:0043228, GO:0044430, GO:0044424, GO:0005622, GO:0043226, GO:0044422
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3B9P, chain A
Confidence level:very confident
Coverage over the Query: 203-301,411-523,537-571
View the alignment between query and template
View the model in PyMOL
Template: 3CF2, chain A
Confidence level:very confident
Coverage over the Query: 213-427,440-489,506-518,534-552
View the alignment between query and template
View the model in PyMOL
Template: 3PXI, chain A
Confidence level:confident
Coverage over the Query: 183-288
View the alignment between query and template
View the model in PyMOL